# Database options: nucleotide db, k = 35, l = 31 # Spaced mask = 11111111111111111111111111111111110011001100110011001100110011 # Toggle mask = 1110001101111110001010001100010000100111000110110101101000101101 # Total taxonomy nodes: 30426 # Table size: 9022971396 # Table capacity: 12889484434 # Min clear hash value = 0 100.00 9022971396 3504132 R 1 root 99.07 8939176120 1254136 R1 131567 cellular organisms 85.60 7723294853 12586582 D 2 Bacteria 41.93 3783001413 13820304 P 1224 Proteobacteria 20.06 1809786742 7020497 C 1236 Gammaproteobacteria 5.44 490442901 10319152 O 91347 Enterobacterales 2.69 242730627 22178600 F 543 Enterobacteriaceae 0.45 40163663 6915392 G 547 Enterobacter 0.25 22652290 3214338 G1 354276 Enterobacter cloacae complex 0.08 7512375 6891849 S 550 Enterobacter cloacae 0.01 598158 0 S1 69219 Enterobacter cloacae subsp. dissolvens 0.01 598158 598158 S2 1104326 Enterobacter cloacae subsp. dissolvens SDM 0.00 22368 21046 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 1322 1322 S2 716541 Enterobacter cloacae subsp. cloacae ATCC 13047 0.04 3944550 3105445 S 158836 Enterobacter hormaechei 0.01 463587 463587 S1 301105 Enterobacter hormaechei subsp. hormaechei 0.00 141623 141623 S1 299766 Enterobacter hormaechei subsp. steigerwaltii 0.00 124631 119904 S1 1812934 Enterobacter hormaechei subsp. hoffmannii 0.00 4666 4666 S2 1333851 Enterobacter hormaechei subsp. hoffmannii ECNIH3 0.00 61 61 S2 1333849 Enterobacter hormaechei subsp. hoffmannii ECR091 0.00 105438 105438 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.00 3826 3826 S1 301102 Enterobacter hormaechei subsp. oharae 0.02 1580845 1433398 S 61645 Enterobacter asburiae 0.00 147447 147447 S1 1421338 Enterobacter asburiae L1 0.02 1569670 1569670 S 1812935 Enterobacter roggenkampii 0.01 1272800 1272800 S 69218 Enterobacter cancerogenus 0.01 1077889 17373 G2 2757714 unclassified Enterobacter cloacae complex 0.01 803821 803821 S 2027919 Enterobacter cloacae complex sp. 0.00 122187 122187 S 1915310 Enterobacter cloacae complex sp. ECNIH7 0.00 73124 73124 S 2077136 Enterobacter cloacae complex sp. FDA-CDC-AR_0164 0.00 61384 61384 S 2077137 Enterobacter cloacae complex sp. FDA-CDC-AR_0132 0.01 1005305 1005305 S 299767 Enterobacter ludwigii 0.01 587756 587756 S 2494701 Enterobacter chengduensis 0.01 574359 574359 S 208224 Enterobacter kobei 0.00 312403 312403 S 2071710 Enterobacter sichuanensis 0.09 8090260 111089 G1 2608935 unclassified Enterobacter 0.01 1194179 1194179 S 2724468 Enterobacter sp. JUb54 0.01 1169699 1169699 S 2596949 Enterobacter sp. E76 0.01 1145421 1145421 S 2742676 Enterobacter sp. RHBSTW-00994 0.01 1083359 1083359 S 1914861 Enterobacter sp. SA187 0.01 914697 914697 S 399742 Enterobacter sp. 638 0.01 880862 880862 S 2742639 Enterobacter sp. RHBSTW-00175 0.00 429029 429029 S 2742619 Enterobacter sp. RHB15-C17 0.00 338121 338121 S 1166130 Enterobacter sp. R4-368 0.00 167076 167076 S 2500132 Enterobacter sp. N18-03635 0.00 113134 113134 S 1560339 Enterobacter sp. E20 0.00 100329 100329 S 2565914 Enterobacter sp. 18A13 0.00 90077 90077 S 1827481 Enterobacter sp. ODB01 0.00 84227 84227 S 1868135 Enterobacter sp. HK169 0.00 76769 76769 S 2742673 Enterobacter sp. RHBSTW-00975 0.00 53658 53658 S 1848517 Enterobacter sp. LU1 0.00 49276 49276 S 2747372 Enterobacter sp. DSM 30060 0.00 44401 44401 S 2742656 Enterobacter sp. RHBSTW-00593 0.00 24956 24956 S 1977566 Enterobacter sp. Crenshaw 0.00 14162 14162 S 2742646 Enterobacter sp. RHBSTW-00422 0.00 4021 4021 S 2051905 Enterobacter sp. CRENT-193 0.00 1533 1533 S 211595 Enterobacter sp. RFL1396 0.00 179 179 S 1632810 Enterobacter sp. 247 0.00 6 6 S 1027278 Enterobacter sp. W001 0.01 857232 857232 S 885040 Enterobacter soli 0.01 830692 830692 S 2478464 Enterobacter oligotrophica 0.01 817797 817797 S 881260 Enterobacter bugandensis 0.40 35909803 9727954 G 570 Klebsiella 0.08 6998895 6570732 S 573 Klebsiella pneumoniae 0.00 305857 254721 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 20433 20433 S2 272620 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 0.00 15167 15167 S2 1328324 Klebsiella pneumoniae subsp. pneumoniae KPNIH27 0.00 9608 9608 S2 1123862 Klebsiella pneumoniae subsp. pneumoniae Kp13 0.00 3240 3240 S2 1193292 Klebsiella pneumoniae subsp. pneumoniae 1084 0.00 948 948 S2 1392499 Klebsiella pneumoniae subsp. pneumoniae 1158 0.00 721 721 S2 1125630 Klebsiella pneumoniae subsp. pneumoniae HS11286 0.00 306 306 S2 1328325 Klebsiella pneumoniae subsp. pneumoniae KPR0928 0.00 263 263 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 0.00 232 232 S2 1225181 Klebsiella pneumoniae subsp. pneumoniae KPNIH24 0.00 103 103 S2 484021 Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 0.00 64 64 S2 990925 Klebsiella pneumoniae subsp. pneumoniae KPX 0.00 26 26 S2 1087440 Klebsiella pneumoniae subsp. pneumoniae KPNIH1 0.00 25 25 S2 1406314 Klebsiella pneumoniae subsp. pneumoniae PittNDM01 0.00 93413 0 S1 39831 Klebsiella pneumoniae subsp. rhinoscleromatis 0.00 93413 93413 S2 861365 Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 0.00 10832 10832 S1 1365186 Klebsiella pneumoniae KP-1 0.00 5202 5202 S1 1284798 Klebsiella pneumoniae DMC1097 0.00 3226 3226 S1 1380908 Klebsiella pneumoniae JM45 0.00 1982 1982 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.00 1686 1686 S1 1304922 Klebsiella pneumoniae 500_1420 0.00 1679 1679 S1 1392500 Klebsiella pneumoniae HK787 0.00 1610 1610 S1 1244085 Klebsiella pneumoniae CG43 0.00 1335 1335 S1 1420012 Klebsiella pneumoniae 30660/NJST258_1 0.00 498 498 S1 574 Klebsiella pneumoniae subsp. ozaenae 0.00 421 421 S1 1420013 Klebsiella pneumoniae 30684/NJST258_2 0.00 207 207 S1 1284804 Klebsiella pneumoniae UHKPC07 0.00 199 199 S1 1284802 Klebsiella pneumoniae UHKPC33 0.00 16 16 S1 1087446 Klebsiella pneumoniae FCF1305 0.05 4182724 4175517 S 548 Klebsiella aerogenes 0.00 6700 6700 S1 935296 Klebsiella aerogenes EA1509E 0.00 507 507 S1 1028307 Klebsiella aerogenes KCTC 2190 0.04 3513321 3512743 S 571 Klebsiella oxytoca 0.00 546 546 S1 1333852 Klebsiella oxytoca KONIH1 0.00 32 32 S1 795470 Klebsiella oxytoca KOX105 0.04 3354416 2201111 G1 2608929 unclassified Klebsiella 0.01 585819 585819 S 2488567 Klebsiella sp. FDAARGOS_511 0.00 127773 127773 S 1972757 Klebsiella sp. PO552 0.00 90798 90798 S 2675726 Klebsiella sp. WP8-S18-ESBL-06 0.00 57625 57625 S 2267618 Klebsiella sp. P1CD1 0.00 53130 53130 S 2697371 Klebsiella sp. MPUS7 0.00 51157 51157 S 2675710 Klebsiella sp. WP3-W18-ESBL-02 0.00 47336 47336 S 1934254 Klebsiella sp. M5al 0.00 39920 39920 S 2675713 Klebsiella sp. WP4-W18-ESBL-05 0.00 34541 34541 S 1905288 Klebsiella sp. LTGPAF-6F 0.00 33245 33245 S 2015795 Klebsiella sp. LY 0.00 30732 30732 S 2675711 Klebsiella sp. WP3-S18-ESBL-05 0.00 682 682 S 2742649 Klebsiella sp. RHBSTW-00464 0.00 187 187 S 160057 Klebsiella sp. KCL-2 0.00 150 150 S 2675718 Klebsiella sp. WP7-S18-ESBL-04 0.00 114 114 S 2742651 Klebsiella sp. RHBSTW-00484 0.00 57 57 S 2675717 Klebsiella sp. WP7-S18-CRE-03 0.00 39 39 S 2675716 Klebsiella sp. WP7-S18-CRE-02 0.03 2911765 2875843 S 1134687 Klebsiella michiganensis 0.00 17355 17355 S1 1006551 Klebsiella michiganensis KCTC 1686 0.00 16669 16669 S1 1308980 Klebsiella michiganensis HKOPL1 0.00 1898 1898 S1 1191061 Klebsiella michiganensis E718 0.02 1872467 1773263 S 1463165 Klebsiella quasipneumoniae 0.00 97800 97800 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 1404 1404 S1 1463164 Klebsiella quasipneumoniae subsp. similipneumoniae 0.02 1662485 1634792 S 244366 Klebsiella variicola 0.00 27693 27693 S1 640131 Klebsiella variicola At-22 0.01 934086 934086 S 2153354 Klebsiella huaxiensis 0.01 646912 646912 S 2058152 Klebsiella grimontii 0.00 104778 104778 S 2026240 Klebsiella quasivariicola 0.35 31781078 9543374 G 544 Citrobacter 0.12 11154776 2423636 G1 1344959 Citrobacter freundii complex 0.07 5983872 5831760 S 546 Citrobacter freundii 0.00 109576 109576 S1 1333848 Citrobacter freundii CFNIH1 0.00 42536 42536 S1 1006003 Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681 0.01 881656 881656 S 1639133 Citrobacter portucalensis 0.01 855778 855778 S 67827 Citrobacter werkmanii 0.00 333195 333195 S 2066049 Citrobacter freundii complex sp. CFNIH2 0.00 263396 263396 S 57706 Citrobacter braakii 0.00 249452 249452 S 133448 Citrobacter youngae 0.00 104724 104724 S 2077149 Citrobacter freundii complex sp. CFNIH9 0.00 42263 42263 S 2077148 Citrobacter freundii complex sp. CFNIH4 0.00 14967 14967 S 2077147 Citrobacter freundii complex sp. CFNIH3 0.00 1837 1837 S 2529121 Citrobacter sp. ABFQG 0.08 6806703 1864603 G1 2644389 unclassified Citrobacter 0.01 1024138 1024138 S 2742624 Citrobacter sp. RHB25-C09 0.01 957384 957384 S 2562449 Citrobacter sp. SNU WT2 0.01 732940 732940 S 2653932 Citrobacter sp. NMI7904_11 0.01 688686 688686 S 2546350 Citrobacter sp. LY-1 0.00 137503 137503 S 1703250 Citrobacter sp. CRE-46 0.00 132703 132703 S 1702170 Citrobacter sp. FDAARGOS_156 0.00 104139 104139 S 184912 Citrobacter sp. TSA-1 0.00 103982 103982 S 1920110 Citrobacter sp. CFNIH10 0.00 85368 85368 S 2742668 Citrobacter sp. RHBSTW-00887 0.00 85125 85125 S 2742657 Citrobacter sp. RHBSTW-00599 0.00 83283 83283 S 2742635 Citrobacter sp. RHBSTW-00107 0.00 78636 78636 S 2742625 Citrobacter sp. RHB35-C17 0.00 77649 77649 S 2742677 Citrobacter sp. RHBSTW-01013 0.00 76343 76343 S 2742626 Citrobacter sp. RHB35-C21 0.00 73346 73346 S 2742675 Citrobacter sp. RHBSTW-00986 0.00 72090 72090 S 2742653 Citrobacter sp. RHBSTW-00524 0.00 54160 54160 S 2742627 Citrobacter sp. RHB36-C18 0.00 52487 52487 S 2683822 Citrobacter sp. 172116965 0.00 51108 51108 S 2566012 Citrobacter sp. CF971 0.00 47103 47103 S 2742678 Citrobacter sp. RHBSTW-01044 0.00 38925 38925 S 2742655 Citrobacter sp. RHBSTW-00570 0.00 33078 33078 S 2697370 Citrobacter sp. LUTT5 0.00 29615 29615 S 2716879 Citrobacter sp. Y3 0.00 19494 19494 S 2742661 Citrobacter sp. RHBSTW-00678 0.00 16681 16681 S 2742671 Citrobacter sp. RHBSTW-00944 0.00 16175 16175 S 2742674 Citrobacter sp. RHBSTW-00976 0.00 13182 13182 S 2576406 Citrobacter sp. TBCP-5362 0.00 13151 13151 S 2742636 Citrobacter sp. RHBSTW-00127 0.00 11499 11499 S 2742670 Citrobacter sp. RHBSTW-00903 0.00 11021 11021 S 2742641 Citrobacter sp. RHBSTW-00229 0.00 8879 8879 S 2742654 Citrobacter sp. RHBSTW-00535 0.00 5557 5557 S 2742630 Citrobacter sp. RHBSTW-00021 0.00 2293 2293 S 2742629 Citrobacter sp. RHBSTW-00017 0.00 2002 2002 S 2079228 Citrobacter sp. SL156 0.00 1789 1789 S 2742647 Citrobacter sp. RHBSTW-00424 0.00 181 181 S 1036018 Citrobacter sp. 36-4CPA 0.00 160 160 S 2742658 Citrobacter sp. RHBSTW-00628 0.00 104 104 S 2742621 Citrobacter sp. RHB20-C16 0.00 58 58 S 2742622 Citrobacter sp. RHB21-C01 0.00 46 46 S 2742623 Citrobacter sp. RHB21-C05 0.00 33 33 S 2742620 Citrobacter sp. RHB20-C15 0.00 4 4 S 1037358 Citrobacter sp. 913 0.01 1335747 481981 S 35703 Citrobacter amalonaticus 0.01 853766 853766 S1 1261127 Citrobacter amalonaticus Y19 0.01 1162640 0 S 67825 Citrobacter rodentium 0.01 1162640 1162640 S1 637910 Citrobacter rodentium ICC168 0.01 850695 850695 S 67824 Citrobacter farmeri 0.01 770418 759328 S 545 Citrobacter koseri 0.00 11090 11090 S1 290338 Citrobacter koseri ATCC BAA-895 0.00 156725 156725 S 1563222 Citrobacter pasteurii 0.26 23104086 1873080 G 561 Escherichia 0.17 15351315 14557741 S 562 Escherichia coli 0.00 161819 151665 S1 83334 Escherichia coli O157:H7 0.00 3299 3299 S2 1328859 Escherichia coli O157:H7 str. SS17 0.00 3182 3182 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 1571 1571 S2 1330457 Escherichia coli O157:H7 str. SS52 0.00 1141 1141 S2 502346 Escherichia coli O157:H7 str. TW14588 0.00 449 449 S2 1343836 Escherichia coli O157:H7 str. F8092B 0.00 208 208 S2 444450 Escherichia coli O157:H7 str. EC4115 0.00 180 180 S2 386585 Escherichia coli O157:H7 str. Sakai 0.00 124 124 S2 544404 Escherichia coli O157:H7 str. TW14359 0.00 37731 37731 S1 2027293 Escherichia coli O8:H8 0.00 34679 34679 S1 696406 Escherichia coli UMNK88 0.00 29153 29153 S1 1392854 Escherichia coli M8 0.00 28948 28948 S1 2603836 Escherichia coli O10:H32 0.00 28648 0 S1 861906 Escherichia coli O44:H18 0.00 28648 28648 S2 216592 Escherichia coli 042 0.00 25850 25850 S1 1050617 Escherichia coli UMNF18 0.00 24190 24190 S1 585397 Escherichia coli ED1a 0.00 23025 23025 S1 409438 Escherichia coli SE11 0.00 21139 21139 S1 340186 Escherichia coli E110019 0.00 20113 20113 S1 1446746 Escherichia coli O6:H16 0.00 15564 0 S1 1603259 Escherichia coli O139:H28 0.00 15564 15564 S2 331111 Escherichia coli O139:H28 str. E24377A 0.00 15167 15167 S1 2048777 Escherichia coli O15:H11 0.00 15144 15144 S1 2048779 Escherichia coli O182:H21 0.00 14142 14142 S1 362663 Escherichia coli 536 0.00 11620 11620 S1 1045010 Escherichia coli O157 0.00 11586 10106 S1 1038927 Escherichia coli O104:H4 0.00 766 766 S2 1048254 Escherichia coli O104:H4 str. C227-11 0.00 303 303 S2 1133853 Escherichia coli O104:H4 str. 2009EL-2071 0.00 210 210 S2 1133852 Escherichia coli O104:H4 str. 2011C-3493 0.00 201 201 S2 1134782 Escherichia coli O104:H4 str. 2009EL-2050 0.00 11126 11126 S1 745156 Escherichia coli 1303 0.00 9639 9639 S1 2048781 Escherichia coli O27:H7 0.00 9286 9286 S1 941323 Escherichia coli VR50 0.00 9146 0 S1 2233553 Escherichia coli O43 0.00 9146 9146 S2 1055541 Escherichia coli O43 str. RM10042 0.00 8487 8112 S1 1078034 Escherichia coli O145:H28 0.00 119 119 S2 1248903 Escherichia coli O145:H28 str. RM12761 0.00 118 118 S2 1248823 Escherichia coli O145:H28 str. RM12581 0.00 88 88 S2 1248902 Escherichia coli O145:H28 str. RM13514 0.00 50 50 S2 1248915 Escherichia coli O145:H28 str. RM13516 0.00 8135 8135 S1 331112 Escherichia coli HS 0.00 7528 3320 S1 83333 Escherichia coli K-12 0.00 2667 2667 S2 511145 Escherichia coli str. K-12 substr. MG1655 0.00 630 630 S2 879462 Escherichia coli str. K-12 substr. MG1655star 0.00 515 515 S2 316407 Escherichia coli str. K-12 substr. W3110 0.00 177 177 S2 595496 Escherichia coli BW2952 0.00 147 147 S2 679895 Escherichia coli BW25113 0.00 53 53 S2 1403831 Escherichia coli str. K-12 substr. MC4100 0.00 19 19 S2 1245474 Escherichia coli ER2796 0.00 7278 7278 S1 2048778 Escherichia coli O178:H19 0.00 6710 6710 S1 1078032 Escherichia coli O45:H2 0.00 6485 6485 S1 2048776 Escherichia coli O128:H27 0.00 6446 6446 S1 1358422 Escherichia coli PCN061 0.00 6363 0 S1 1450174 Escherichia coli O119 0.00 6363 6363 S2 397448 Escherichia coli O119:H6 0.00 6313 6313 S1 1412834 Escherichia coli FAP1 0.00 5825 5825 S1 344610 Escherichia coli 53638 0.00 5812 5812 S1 1329907 Escherichia coli APEC IMT5155 0.00 5368 5368 S1 2491679 Escherichia coli O22:H8 0.00 5267 5267 S1 481805 Escherichia coli ATCC 8739 0.00 5167 5167 S1 1355100 Escherichia coli JJ1886 0.00 4910 4910 S1 316435 Escherichia coli Nissle 1917 0.00 4390 4390 S1 585057 Escherichia coli IAI39 0.00 4350 1 S1 244320 Escherichia coli O55:H7 0.00 2495 2495 S2 1048689 Escherichia coli O55:H7 str. RM12579 0.00 1854 1854 S2 701177 Escherichia coli O55:H7 str. CB9615 0.00 4314 4314 S1 1382700 Escherichia coli PMV-1 0.00 4240 4240 S1 1446701 Escherichia coli O169:H41 0.00 4126 0 S1 1072458 Escherichia coli O7:K1 0.00 4126 4126 S2 1072459 Escherichia coli O7:K1 str. CE10 0.00 4064 4064 S1 2605620 Escherichia coli O80:H26 0.00 4051 4051 S1 1446707 Escherichia coli O25:NM 0.00 3926 3926 S1 1502658 Escherichia coli O2:H6 0.00 3800 3800 S1 930406 Escherichia coli O157:H16 0.00 3753 3753 S1 405955 Escherichia coli APEC O1 0.00 3415 3415 S1 913091 Escherichia coli TW10598 0.00 3397 1124 S1 376725 Escherichia coli O103:H2 0.00 2273 2273 S2 585395 Escherichia coli O103:H2 str. 12009 0.00 3364 3364 S1 741093 Escherichia coli Xuzhou21 0.00 3357 3357 S1 199310 Escherichia coli CFT073 0.00 3330 3330 S1 991919 Escherichia coli O145:NM 0.00 3291 3291 S1 1078021 Escherichia coli O113:H21 0.00 3047 3047 S1 439184 Escherichia coli RS218 0.00 2836 0 S1 1055539 Escherichia coli O91 0.00 2836 2836 S2 1055545 Escherichia coli O91 str. RM7190 0.00 2713 2713 S1 1311757 Escherichia coli ACN001 0.00 2663 2663 S1 585034 Escherichia coli IAI1 0.00 2638 2638 S1 1954351 Escherichia coli APEC O2-211 0.00 2632 2632 S1 991915 Escherichia coli O121:H19 0.00 2629 2629 S1 2592065 Escherichia coli O1:H42 0.00 2612 2612 S1 585055 Escherichia coli 55989 0.00 2417 2417 S1 941280 Escherichia coli O25b:H4 0.00 2364 2364 S1 439855 Escherichia coli SMS-3-5 0.00 2306 2306 S1 941322 Escherichia coli O25b:H4-ST131 0.00 2262 2262 S1 758831 Escherichia coli ECC-1470 0.00 2256 2256 S1 591946 Escherichia coli LF82 0.00 2128 2128 S1 577675 Escherichia coli O91:H21 0.00 2115 2115 S1 2126982 Escherichia coli O18:H1 0.00 2063 2063 S1 869729 Escherichia coli UM146 0.00 2017 1192 S1 168927 Escherichia coli O111:H- 0.00 825 825 S2 585396 Escherichia coli O111:H- str. 11128 0.00 2014 2014 S1 1401688 Escherichia coli APEC O18 0.00 1951 1951 S1 714962 Escherichia coli IHE3034 0.00 1891 1891 S1 1274814 Escherichia coli APEC O78 0.00 1874 1874 S1 2048780 Escherichia coli O25:H16 0.00 1823 1823 S1 1200752 Escherichia coli NCCP15648 0.00 1757 1757 S1 585056 Escherichia coli UMN026 0.00 1723 1723 S1 2605619 Escherichia coli O16:H48 0.00 1660 1660 S1 655817 Escherichia coli ABU 83972 0.00 1641 1641 S1 431946 Escherichia coli SE15 0.00 1622 470 S1 244319 Escherichia coli O26:H11 0.00 1152 1152 S2 573235 Escherichia coli O26:H11 str. 11368 0.00 1618 0 S1 685037 Escherichia coli O83:H1 0.00 1618 1618 S2 685038 Escherichia coli O83:H1 str. NRG 857C 0.00 1420 1420 S1 563770 Escherichia coli Vir68 0.00 1337 1337 S1 1392858 Escherichia coli M12 0.00 1334 1334 S1 316401 Escherichia coli ETEC H10407 0.00 1173 12 S1 404399 Escherichia coli O26 0.00 1086 1086 S2 1055534 Escherichia coli O26 str. RM10386 0.00 75 75 S2 1055533 Escherichia coli O26 str. RM8426 0.00 1120 1120 S1 340184 Escherichia coli B7A 0.00 939 11 S1 1055537 Escherichia coli O121 0.00 928 928 S2 1055543 Escherichia coli O121 str. RM8352 0.00 939 939 S1 344601 Escherichia coli B171 0.00 881 881 S1 595495 Escherichia coli KO11FL 0.00 763 0 S1 1055538 Escherichia coli O145 0.00 763 763 S2 1055544 Escherichia coli O145 str. RM9872 0.00 732 732 S1 413997 Escherichia coli B str. REL606 0.00 730 730 S1 866789 Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 0.00 681 681 S1 1322345 Escherichia coli ATCC 25922 0.00 670 0 S1 1055536 Escherichia coli O103 0.00 670 670 S2 1055540 Escherichia coli O103 str. RM8385 0.00 660 660 S1 373045 Escherichia coli O111:NM 0.00 475 0 S1 1055535 Escherichia coli O111 0.00 475 475 S2 1055542 Escherichia coli O111 str. RM9322 0.00 404 392 S1 168807 Escherichia coli O127:H6 0.00 12 12 S2 574521 Escherichia coli O127:H6 str. E2348/69 0.00 367 367 S1 2048775 Escherichia coli O114:H49 0.00 332 332 S1 1441627 Escherichia coli str. Sanji 0.00 309 309 S1 585035 Escherichia coli S88 0.00 244 244 S1 1001989 Escherichia coli PCN033 0.00 240 240 S1 566546 Escherichia coli W 0.00 206 206 S1 762608 Escherichia coli ETEC 1392/75 0.00 144 144 S1 536056 Escherichia coli DH1 0.00 143 143 S1 498388 Escherichia coli C 0.00 141 141 S1 1355101 Escherichia coli JJ1887 0.00 116 116 S1 488477 Escherichia coli F18+ 0.00 109 109 S1 475609 Escherichia coli chi7122 0.00 105 105 S1 1416674 Escherichia coli N37139PS 0.00 102 102 S1 37762 Escherichia coli B 0.00 99 99 S1 866768 Escherichia coli 'BL21-Gold(DE3)pLysS AG' 0.00 91 91 S1 1619910 Escherichia coli O104:H7 0.00 79 79 S1 1230480 Escherichia coli EC302/04 0.00 49 49 S1 376724 Escherichia coli O26:H- 0.00 43 43 S1 569579 Escherichia coli NU14 0.00 37 37 S1 364106 Escherichia coli UTI89 0.00 32 32 S1 885275 Escherichia coli str. 'clone D i14' 0.00 20 20 S1 469008 Escherichia coli BL21(DE3) 0.00 19 19 S1 1416676 Escherichia coli N40607 0.00 16 16 S1 885276 Escherichia coli str. 'clone D i2' 0.00 13 0 S1 1335302 Escherichia coli O104:H21 0.00 13 13 S2 1335303 Escherichia coli O104:H21 str. CFSAN002236 0.00 11 11 S1 1335916 Escherichia coli LY180 0.02 2017721 1966483 S 208962 Escherichia albertii 0.00 51238 51238 S1 1440052 Escherichia albertii KF1 0.02 1839400 1806528 S 564 Escherichia fergusonii 0.00 26435 26435 S1 585054 Escherichia fergusonii ATCC 35469 0.00 6437 6437 S1 981367 Escherichia fergusonii ECD227 0.01 1331010 1331010 S 1499973 Escherichia marmotae 0.01 691560 42 G1 2608889 unclassified Escherichia 0.01 680320 680320 S 2044467 Escherichia sp. E4742 0.00 11166 11166 S 2725997 Escherichia sp. SCLE84 0.00 32 32 S 299586 Escherichia sp. Sflu5 0.20 17834640 2006215 G 590 Salmonella 0.16 14290963 7497183 S 28901 Salmonella enterica 0.05 4223884 1259135 S1 59201 Salmonella enterica subsp. enterica 0.00 229689 0 S2 1242085 Salmonella enterica subsp. enterica serovar Macclesfield 0.00 229689 229689 S3 1242107 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 0.00 157501 142868 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 4310 4310 S3 568709 Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 0.00 2200 2200 S3 1454638 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 0.00 1337 1337 S3 1029978 Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13 0.00 1028 1028 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.00 970 596 S3 1620419 Salmonella enterica subsp. enterica serovar Typhimurium var. 5- 0.00 374 374 S4 1271862 Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 0.00 762 762 S3 1171376 Salmonella enterica subsp. enterica serovar Typhimurium str. U288 0.00 437 437 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.00 409 409 S3 1454643 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-1702 0.00 404 404 S3 1454639 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1899 0.00 379 379 S3 1454636 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1896 0.00 361 361 S3 990282 Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 0.00 327 327 S3 1454642 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-0870 0.00 296 296 S3 1454641 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2010K-1587 0.00 251 251 S3 1454634 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1880 0.00 198 198 S3 1454630 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1808 0.00 184 184 S3 85569 Salmonella enterica subsp. enterica serovar Typhimurium str. DT104 0.00 180 180 S3 1454644 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-1640 0.00 153 153 S3 996633 Salmonella enterica subsp. enterica serovar Typhimurium str. L-3553 0.00 152 0 S3 99287 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 0.00 152 152 S4 588858 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 0.00 109 109 S3 718274 Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 0.00 88 88 S3 1401642 Salmonella enterica subsp. enterica serovar Typhimurium str. STM709 0.00 65 65 S3 1454640 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC H2662 0.00 12 12 S3 568708 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 0.00 12 12 S3 216597 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 0.00 9 9 S3 1454645 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-2059 0.00 114257 52602 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 25147 25147 S3 1454627 Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 0.00 8359 8359 S3 930779 Salmonella enterica subsp. enterica serovar Newport str. Levine 15 0.00 6224 6224 S3 930778 Salmonella enterica subsp. enterica serovar Newport str. Levine 1 0.00 5875 5875 S3 1454614 Salmonella enterica subsp. enterica serovar Newport str. CDC 2012K-0938 0.00 4209 4209 S3 1454625 Salmonella enterica subsp. enterica serovar Newport str. CDC 2009K-1331 0.00 3515 3515 S3 1454620 Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1927 0.00 2729 2729 S3 997339 Salmonella enterica subsp. enterica serovar Newport str. WA_14882 0.00 1940 1940 S3 1454618 Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1925 0.00 517 517 S3 858306 Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 0.00 509 509 S3 796731 Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 0.00 489 489 S3 796730 Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 0.00 318 318 S3 1454621 Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1928 0.00 267 267 S3 796732 Salmonella enterica subsp. enterica serovar Newport str. CVM 22513 0.00 253 253 S3 1454616 Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1923 0.00 246 246 S3 1454629 Salmonella enterica subsp. enterica serovar Newport str. CDC 2012K-0663 0.00 228 228 S3 877468 Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 0.00 203 203 S3 1454619 Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 0.00 186 186 S3 1454622 Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1929 0.00 120 120 S3 1454617 Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1924 0.00 107 107 S3 858307 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 0.00 92 92 S3 858305 Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 0.00 68 68 S3 796733 Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 0.00 54 54 S3 423368 Salmonella enterica subsp. enterica serovar Newport str. SL254 0.00 95294 80796 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 854 854 S3 1412501 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19940857 0.00 831 831 S3 1412618 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120929 0.00 648 648 S3 1412600 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100325 0.00 647 647 S3 696867 Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 0.00 586 586 S3 1412470 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120008 0.00 485 485 S3 1244111 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110357 0.00 458 458 S3 1412580 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121986 0.00 360 360 S3 1412562 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121747 0.00 357 357 S3 1412594 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121177 0.00 324 324 S3 1412582 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121970 0.00 313 313 S3 1412495 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20123395 0.00 285 285 S3 1412481 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20100239 0.00 269 269 S3 1244119 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110361 0.00 265 265 S3 1412555 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121765 0.00 254 254 S3 1412534 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120685 0.00 199 199 S3 1412601 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120051 0.00 199 199 S3 1412494 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19943269 0.00 166 166 S3 886715 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968 0.00 166 166 S3 1243621 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110356 0.00 166 166 S3 1412457 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100101 0.00 159 159 S3 1244118 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110360 0.00 158 158 S3 998822 Salmonella enterica subsp. enterica serovar Enteritidis str. RM2968 0.00 157 157 S3 926034 Salmonella enterica subsp. enterica serovar Enteritidis str. 77-1427 0.00 155 155 S3 1412493 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19942384 0.00 143 143 S3 1412569 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120994 0.00 142 142 S3 1412574 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122033 0.00 140 140 S3 1412593 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121176 0.00 133 133 S3 1412472 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19980677 0.00 118 118 S3 1412571 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121812 0.00 118 118 S3 1412575 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122031 0.00 116 116 S3 1412500 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19930684 0.00 113 113 S3 1412527 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121826 0.00 110 110 S3 1412535 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111576 0.00 108 108 S3 1412465 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100134 0.00 103 103 S3 1412532 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120776 0.00 103 103 S3 1412454 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090698 0.00 102 102 S3 1412477 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20084384 0.00 96 96 S3 1412499 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19994216 0.00 95 95 S3 1412536 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120544 0.00 92 92 S3 1412609 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120734 0.00 86 86 S3 550537 Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 0.00 86 86 S3 1244112 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110358 0.00 86 86 S3 1244121 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111175 0.00 82 82 S3 1412583 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121969 0.00 79 79 S3 1412588 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130345 0.00 76 76 S3 1412611 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120773 0.00 73 73 S3 1244122 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111174 0.00 70 70 S3 1412531 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120963 0.00 68 68 S3 1412541 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121750 0.00 66 66 S3 1243620 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110355 0.00 66 66 S3 1412516 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094383 0.00 66 66 S3 1412537 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120528 0.00 66 66 S3 1412557 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121542 0.00 65 65 S3 1412561 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121672 0.00 65 65 S3 1412514 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093421 0.00 63 63 S3 1412605 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120590 0.00 61 61 S3 1412554 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121744 0.00 61 61 S3 1243619 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 0.00 60 60 S3 1412453 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090641 0.00 60 60 S3 1412517 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20090419 0.00 59 59 S3 1412543 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120548 0.00 57 57 S3 1412485 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19981522 0.00 57 57 S3 1412508 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20092320 0.00 56 56 S3 1412590 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130347 0.00 54 54 S3 1412528 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120213 0.00 54 54 S3 1412619 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120969 0.00 54 54 S3 1412464 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100130 0.00 54 54 S3 1412479 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094177 0.00 52 52 S3 1412607 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120686 0.00 51 51 S3 1412564 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120765 0.00 51 51 S3 1412525 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121541 0.00 51 51 S3 1412576 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122026 0.00 48 48 S3 1244113 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110359 0.00 48 48 S3 1412476 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094682 0.00 48 48 S3 1412560 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121748 0.00 48 48 S3 1412565 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121671 0.00 47 47 S3 1412526 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121825 0.00 47 47 S3 1412467 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120003 0.00 47 47 S3 1412471 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120009 0.00 47 47 S3 1412597 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121180 0.00 43 43 S3 1412521 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20090877 0.00 41 41 S3 1412486 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19981857 0.00 41 41 S3 1412452 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19992322 0.00 40 40 S3 1412548 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120219 0.00 40 40 S3 1412511 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093788 0.00 39 39 S3 1412460 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090135 0.00 38 38 S3 1412482 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20100349 0.00 38 38 S3 1412530 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121004 0.00 38 38 S3 1412587 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090195 0.00 37 37 S3 1412456 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110222 0.00 37 37 S3 1412546 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120240 0.00 37 37 S3 1412596 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121179 0.00 35 35 S3 1412568 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120497 0.00 34 34 S3 1412566 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120555 0.00 32 32 S3 1412540 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121751 0.00 32 32 S3 1412507 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20095309 0.00 31 31 S3 1412552 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120469 0.00 30 30 S3 1412487 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19960848 0.00 30 30 S3 1412567 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111554 0.00 28 28 S3 1412615 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120925 0.00 27 27 S3 1412515 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094389 0.00 27 27 S3 1412556 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120496 0.00 27 27 S3 1412591 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130348 0.00 26 26 S3 1147754 Salmonella enterica subsp. enterica serovar Enteritidis str. LA5 0.00 26 26 S3 1412610 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120738 0.00 25 25 S3 1412613 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120917 0.00 24 24 S3 1412599 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100089 0.00 23 23 S3 1412488 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20082034 0.00 23 23 S3 1412578 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121990 0.00 23 23 S3 1412602 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120356 0.00 23 23 S3 1412553 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120697 0.00 23 23 S3 1412616 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121689 0.00 22 22 S3 1412603 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120580 0.00 22 22 S3 1412466 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120002 0.00 22 22 S3 1412518 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094642 0.00 22 22 S3 1412513 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20090435 0.00 21 21 S3 1412598 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100088 0.00 21 21 S3 1412483 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20121703 0.00 20 20 S3 1412505 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094301 0.00 20 20 S3 1412551 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121753 0.00 20 20 S3 1412545 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120498 0.00 20 20 S3 1412544 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120505 0.00 20 20 S3 1412533 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120775 0.00 20 20 S3 1412468 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120005 0.00 19 19 S3 1412506 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20083456 0.00 19 19 S3 1412573 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122045 0.00 19 19 S3 1412617 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120927 0.00 18 18 S3 1412558 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120968 0.00 18 18 S3 1412559 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120677 0.00 18 18 S3 1412585 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090530 0.00 17 17 S3 1412539 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111514 0.00 16 16 S3 1412489 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20085285 0.00 16 16 S3 1412519 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093950 0.00 15 15 S3 1412549 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111510 0.00 14 14 S3 1412589 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130346 0.00 14 14 S3 1412550 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120722 0.00 14 14 S3 1412484 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094521 0.00 14 14 S3 1412524 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094079 0.00 13 13 S3 1412579 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121989 0.00 13 13 S3 1412474 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19970769 0.00 13 13 S3 1412542 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120970 0.00 13 13 S3 1412570 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120916 0.00 12 12 S3 1412509 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093784 0.00 12 12 S3 1412502 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19982831 0.00 11 11 S3 1412510 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093977 0.00 11 11 S3 1412463 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090884 0.00 11 11 S3 1412497 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19961622 0.00 10 10 S3 1412461 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090332 0.00 10 10 S3 1412577 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122022 0.00 10 10 S3 1412455 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110221 0.00 10 10 S3 1412547 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120229 0.00 10 10 S3 1412529 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120200 0.00 10 10 S3 1412522 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093538 0.00 9 9 S3 1412451 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110223 0.00 9 9 S3 1412492 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20095440 0.00 8 8 S3 1412584 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100131 0.00 8 8 S3 1412612 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120774 0.00 8 8 S3 1412480 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20084644 0.00 7 7 S3 1412459 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090193 0.00 7 7 S3 1412475 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093266 0.00 6 6 S3 1412614 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120918 0.00 6 6 S3 1412595 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121178 0.00 6 6 S3 1412520 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093543 0.00 6 6 S3 1412512 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093430 0.00 4 4 S3 1412469 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120007 0.00 4 4 S3 1412478 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20084824 0.00 3 3 S3 1412538 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111515 0.00 3 3 S3 1412504 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094350 0.00 2 2 S3 1412604 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120581 0.00 2 2 S3 1412498 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19983126 0.00 2 2 S3 1412503 Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094803 0.00 1 1 S3 1412462 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090531 0.00 1 1 S3 1412586 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100100 0.00 83202 62068 S2 913070 Salmonella enterica subsp. enterica serovar Gaminara 0.00 21134 21134 S3 1242094 Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 0.00 82855 5332 S2 192954 Salmonella enterica subsp. enterica serovar Mbandaka 0.00 77523 77523 S3 984237 Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 0.00 82725 54025 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 28700 28700 S3 702982 Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26 0.00 82057 58497 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 4017 4017 S3 1454589 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1728 0.00 3315 3315 S3 1454593 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1765 0.00 2570 2570 S3 1454585 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1735 0.00 1986 1986 S3 1454594 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1766 0.00 1975 1975 S3 1454588 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1677 0.00 1947 1947 S3 984211 Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592 0.00 1688 1688 S3 1454584 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1727 0.00 1650 1650 S3 1454586 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1736 0.00 1380 1380 S3 1399029 Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003961 0.00 906 906 S3 1454590 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1175 0.00 797 797 S3 1454596 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1781 0.00 607 607 S3 1454583 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1783 0.00 452 452 S3 1454592 Salmonella enterica subsp. enterica serovar Anatum str. CDC 06-0532 0.00 270 270 S3 1454587 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1676 0.00 69221 69221 S2 1962641 Salmonella enterica subsp. enterica serovar Birkenhead 0.00 64101 60276 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 1332 1332 S3 220341 Salmonella enterica subsp. enterica serovar Typhi str. CT18 0.00 1208 1208 S3 497977 Salmonella enterica subsp. enterica serovar Typhi str. 404ty 0.00 728 728 S3 209261 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 0.00 407 407 S3 527001 Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 0.00 150 150 S3 1132507 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 0.00 63396 60576 S2 70803 Salmonella enterica subsp. enterica serovar Minnesota 0.00 2820 2820 S3 1124956 Salmonella enterica subsp. enterica serovar Minnesota str. ATCC 49284 0.00 59664 59664 S2 2500153 Salmonella enterica subsp. enterica serovar Karamoja 0.00 59228 59228 S2 2564436 Salmonella enterica subsp. enterica serovar Florida 0.00 55755 42931 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.00 12824 12824 S3 596155 Salmonella enterica subsp. enterica serovar Infantis str. SARB27 0.00 54776 0 S2 1243577 Salmonella enterica subsp. enterica serovar Milwaukee 0.00 54776 54776 S3 1243578 Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 0.00 52846 0 S2 1242080 Salmonella enterica subsp. enterica serovar Djakarta 0.00 52846 52846 S3 1242091 Salmonella enterica subsp. enterica serovar Djakarta str. S-1087 0.00 50735 45507 S2 28150 Salmonella enterica subsp. enterica serovar Senftenberg 0.00 5020 5020 S3 1399047 Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 0.00 208 208 S3 749965 Salmonella enterica subsp. enterica serovar Senftenberg str. 361154004 0.00 49913 0 S2 436295 Salmonella enterica subsp. enterica serovar Poona 0.00 49913 49913 S3 1124962 Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 0.00 49540 25564 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 10460 10460 S3 1454607 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 07-0954 0.00 6162 6162 S3 1454610 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 2011K-1674 0.00 1751 1751 S3 763921 Salmonella enterica subsp. enterica serovar Montevideo str. 42N 0.00 1082 1082 S3 1454604 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1904 0.00 1068 1068 S3 1454609 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 2009K-0792 0.00 859 859 S3 1454603 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 0.00 645 645 S3 1454608 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 08-1942 0.00 479 479 S3 1454612 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 2013K-0218 0.00 289 289 S3 1454598 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1901 0.00 277 277 S3 1454600 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1912 0.00 237 237 S3 1454599 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1900 0.00 234 234 S3 1454613 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 2010K-0257 0.00 192 192 S3 1454601 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1913 0.00 166 166 S3 1454611 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 2012K-1544 0.00 50 50 S3 1454606 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 86-0391 0.00 16 16 S3 745022 Salmonella enterica subsp. enterica serovar Montevideo str. 531954 0.00 9 9 S3 859199 Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20 0.00 49447 0 S2 598 Salmonella enterica subsp. enterica serovar Rubislaw 0.00 49447 49447 S3 938143 Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 0.00 48208 47240 S2 57743 Salmonella enterica subsp. enterica serovar Weltevreden 0.00 968 968 S3 1173939 Salmonella enterica subsp. enterica serovar Weltevreden str. 1655 0.00 46860 11272 S2 486994 Salmonella enterica subsp. enterica serovar Hvittingfoss 0.00 35588 35588 S3 1242097 Salmonella enterica subsp. enterica serovar Hvittingfoss str. SA20014981 0.00 46524 44297 S2 211968 Salmonella enterica subsp. enterica serovar Albany 0.00 2227 2227 S3 1173798 Salmonella enterica subsp. enterica serovar Albany str. ATCC 51960 0.00 40900 0 S2 913074 Salmonella enterica subsp. enterica serovar Inverness 0.00 40900 40900 S3 941187 Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 0.00 40602 36820 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.00 696 696 S3 1183391 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000968 0.00 662 662 S3 1182174 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 0.00 575 575 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.00 373 373 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.00 309 309 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 136 136 S3 1208622 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001118 0.00 112 112 S3 1182176 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000700 0.00 101 101 S3 1173457 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000191 0.00 99 99 S3 1208630 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001115 0.00 97 97 S3 1173456 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000228 0.00 92 92 S3 1182181 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000952 0.00 91 91 S3 1208629 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001112 0.00 78 78 S3 1182183 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000954 0.00 72 72 S3 1182191 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000961 0.00 59 59 S3 1208623 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001140 0.00 45 45 S3 1182188 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000958 0.00 43 43 S3 1182180 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000951 0.00 35 35 S3 1182178 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000753 0.00 32 32 S3 1182190 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000960 0.00 31 31 S3 1182193 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000963 0.00 18 18 S3 1183393 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000970 0.00 18 18 S3 1173459 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000211 0.00 8 8 S3 1173461 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000212 0.00 39604 32576 S2 286782 Salmonella enterica subsp. enterica serovar Stanleyville 0.00 7028 7028 S3 1194159 Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 0.00 37197 0 S2 181798 Salmonella enterica subsp. enterica serovar Sloterdijk 0.00 37197 37197 S3 938141 Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791 0.00 35875 0 S2 1243583 Salmonella enterica subsp. enterica serovar Onderstepoort 0.00 35875 35875 S3 1243584 Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 0.00 35068 0 S2 1242079 Salmonella enterica subsp. enterica serovar Apapa 0.00 35068 35068 S3 1242088 Salmonella enterica subsp. enterica serovar Apapa str. SA20060561 0.00 33806 33806 S2 58101 Salmonella enterica subsp. enterica serovar Waycross 0.00 32749 30873 S2 340188 Salmonella enterica subsp. enterica serovar Cerro 0.00 1876 1876 S3 1410916 Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588 0.00 31712 0 S2 913085 Salmonella enterica subsp. enterica serovar Wandsworth 0.00 31712 31712 S3 1243595 Salmonella enterica subsp. enterica serovar Wandsworth str. SA20092095 0.00 30553 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 30553 30553 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 30160 30149 S2 28144 Salmonella enterica subsp. enterica serovar Derby 0.00 11 11 S3 1401650 Salmonella enterica subsp. enterica serovar Derby str. T12 0.00 29903 24058 S2 1243585 Salmonella enterica subsp. enterica serovar Ouakam 0.00 5845 5845 S3 1243586 Salmonella enterica subsp. enterica serovar Ouakam str. SA20034636 0.00 29447 29447 S2 46626 Salmonella enterica subsp. enterica serovar Give 0.00 28539 28539 S2 596 Salmonella enterica subsp. enterica serovar Muenchen 0.00 27753 828 S2 57045 Salmonella enterica subsp. enterica serovar Paratyphi B 0.00 16599 16599 S3 224729 Salmonella enterica subsp. enterica serovar Java 0.00 10326 10326 S3 1016998 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 0.00 26817 2851 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 23939 23939 S3 1242102 Salmonella enterica subsp. enterica serovar Kentucky str. SA20030505 0.00 27 27 S3 439842 Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188 0.00 25773 0 S2 260368 Salmonella enterica subsp. enterica serovar Bergen 0.00 25773 25773 S3 1240708 Salmonella enterica subsp. enterica serovar Bergen str. ST350 0.00 24437 24437 S2 593905 Salmonella enterica subsp. enterica serovar Corvallis 0.00 24042 24042 S2 149388 Salmonella enterica subsp. enterica serovar Mikawasima 0.00 23859 0 S2 363569 Salmonella enterica subsp. enterica serovar Javiana 0.00 23859 23859 S3 1267753 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 0.00 22527 19985 S2 594 Salmonella enterica subsp. enterica serovar Gallinarum 0.00 1269 1269 S3 550538 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 0.00 680 680 S3 909947 Salmonella enterica subsp. enterica serovar Gallinarum str. SG9 0.00 593 593 S3 685040 Salmonella enterica subsp. enterica serovar Gallinarum str. 9184 0.00 22525 0 S2 1242081 Salmonella enterica subsp. enterica serovar Hillingdon 0.00 22525 22525 S3 1242096 Salmonella enterica subsp. enterica serovar Hillingdon str. N1529-D3 0.00 21965 21965 S2 2564310 Salmonella enterica subsp. enterica serovar Carmel 0.00 21931 0 S2 915158 Salmonella enterica subsp. enterica serovar Manchester 0.00 21931 21931 S3 1242108 Salmonella enterica subsp. enterica serovar Manchester str. ST278 0.00 21485 21485 S2 1077085 Salmonella enterica subsp. enterica serovar Fresno 0.00 20434 20434 S2 2021403 Salmonella enterica subsp. enterica serovar Adjame 0.00 19330 19330 S2 2024273 Salmonella enterica subsp. enterica serovar Sundsvall 0.00 19057 19057 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.00 18628 18628 S2 260678 Salmonella enterica subsp. enterica serovar Goldcoast 0.00 18402 18402 S2 57741 Salmonella enterica subsp. enterica serovar Blockley 0.00 17801 17747 S2 149391 Salmonella enterica subsp. enterica serovar Braenderup 0.00 54 54 S3 930771 Salmonella enterica subsp. enterica serovar Braenderup str. ATCC BAA-664 0.00 17603 14449 S2 54388 Salmonella enterica subsp. enterica serovar Paratyphi A 0.00 1924 1924 S3 941189 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 11511 0.00 749 749 S3 554290 Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 0.00 481 481 S3 295319 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 0.00 15121 12906 S2 605 Salmonella enterica subsp. enterica serovar Pullorum 0.00 2215 2215 S3 1029979 Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 0.00 15015 13722 S2 570935 Salmonella enterica subsp. enterica serovar Pomona 0.00 1293 1293 S3 941188 Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 0.00 14696 14696 S2 2511819 Salmonella enterica subsp. enterica serovar Brancaster 0.00 14356 0 S2 1243590 Salmonella enterica subsp. enterica serovar Quebec 0.00 14356 14356 S3 1243591 Salmonella enterica subsp. enterica serovar Quebec str. S-1267 0.00 13616 8905 S2 119912 Salmonella enterica subsp. enterica serovar Choleraesuis 0.00 3173 3173 S3 321314 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 0.00 934 934 S3 904139 Salmonella enterica subsp. enterica serovar Choleraesuis str. SCSA50 0.00 604 604 S3 938142 Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 0.00 12681 9229 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.00 1805 1805 S3 439851 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 0.00 1023 1023 S3 687860 Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 0.00 624 624 S3 909945 Salmonella enterica subsp. enterica serovar Dublin str. SD3246 0.00 12636 5760 S2 82689 Salmonella enterica subsp. enterica serovar Muenster 0.00 6630 6630 S3 1124958 Salmonella enterica subsp. enterica serovar Muenster str. 0315 0.00 246 246 S3 1124959 Salmonella enterica subsp. enterica serovar Muenster str. 420 0.00 12187 12187 S2 28142 Salmonella enterica subsp. enterica serovar Berta 0.00 12053 12053 S2 192953 Salmonella enterica subsp. enterica serovar Stanley 0.00 11987 11987 S2 286783 Salmonella enterica subsp. enterica serovar Indiana 0.00 11833 0 S2 1242078 Salmonella enterica subsp. enterica serovar Antsalova 0.00 11833 11833 S3 1242087 Salmonella enterica subsp. enterica serovar Antsalova str. S01-0511 0.00 11622 6876 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 2895 2895 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.00 654 654 S3 454169 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 0.00 431 431 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.00 361 361 S3 1271864 Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 0.00 218 218 S3 1030005 Salmonella enterica subsp. enterica serovar Heidelberg str. N418 0.00 116 116 S3 1299044 Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 0.00 71 71 S3 1029997 Salmonella enterica subsp. enterica serovar Heidelberg str. SARA35 0.00 11469 0 S2 189201 Salmonella enterica subsp. enterica serovar Cubana 0.00 11469 11469 S3 1271863 Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 0.00 11326 7588 S2 134047 Salmonella enterica subsp. enterica serovar Bredeney 0.00 3738 3738 S3 1194154 Salmonella enterica subsp. enterica serovar Bredeney str. CFSAN001080 0.00 11067 11067 S2 149387 Salmonella enterica subsp. enterica serovar Brandenburg 0.00 10924 0 S2 29482 Salmonella enterica subsp. enterica serovar Abony 0.00 10924 10924 S3 1029983 Salmonella enterica subsp. enterica serovar Abony str. 0014 0.00 10837 4910 S2 58095 Salmonella enterica subsp. enterica serovar Agona 0.00 5830 5830 S3 454166 Salmonella enterica subsp. enterica serovar Agona str. SL483 0.00 42 42 S3 1406860 Salmonella enterica subsp. enterica serovar Agona str. 24249 0.00 36 36 S3 1124917 Salmonella enterica subsp. enterica serovar Agona str. 460004 2-1 0.00 19 19 S3 1072590 Salmonella enterica subsp. enterica serovar Agona str. 392869-2 0.00 9650 0 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.00 9650 9650 S3 1242101 Salmonella enterica subsp. enterica serovar Johannesburg str. ST203 0.00 8545 7916 S2 143221 Salmonella enterica subsp. enterica serovar Tennessee 0.00 629 629 S3 1003191 Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 0.00 8448 8448 S2 260367 Salmonella enterica subsp. enterica serovar Aberdeen 0.00 7233 7233 S2 483687 Salmonella enterica subsp. enterica serovar Concord 0.00 6799 0 S2 149386 Salmonella enterica subsp. enterica serovar Chester 0.00 6799 6799 S3 941190 Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997 0.00 6023 6023 S2 149385 Salmonella enterica subsp. enterica serovar Hadar 0.00 6001 4400 S2 340190 Salmonella enterica subsp. enterica serovar Schwarzengrund 0.00 1601 1601 S3 439843 Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 0.00 5651 5651 S2 117541 Salmonella enterica subsp. enterica serovar Ohio 0.00 5382 5382 S2 1129117 Salmonella enterica subsp. enterica serovar Nitra 0.00 5018 0 S2 1151172 Salmonella enterica subsp. enterica serovar Abaetetuba 0.00 5018 5018 S3 1208611 Salmonella enterica subsp. enterica serovar Abaetetuba str. ATCC 35640 0.00 4956 0 S2 28146 Salmonella enterica subsp. enterica serovar Moscow 0.00 4956 4956 S3 1243579 Salmonella enterica subsp. enterica serovar Moscow str. S-1843 0.00 4752 4752 S2 340189 Salmonella enterica subsp. enterica serovar Manhattan 0.00 4727 4727 S2 2564349 Salmonella enterica subsp. enterica serovar Dessau 0.00 4679 4679 S2 1160769 Salmonella enterica subsp. enterica serovar Worthington 0.00 4219 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 4219 4219 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 4112 3887 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.00 177 177 S3 1064551 Salmonella enterica subsp. enterica serovar Thompson str. RM6836 0.00 48 48 S3 935705 Salmonella enterica subsp. enterica serovar Thompson str. ATCC 8391 0.00 4068 1610 S2 28147 Salmonella enterica subsp. enterica serovar Oranienburg 0.00 2458 2458 S3 997333 Salmonella enterica subsp. enterica serovar Oranienburg str. 0250 0.00 3963 3854 S2 48409 Salmonella enterica subsp. enterica serovar Virchow 0.00 109 109 S3 465517 Salmonella enterica subsp. enterica serovar Virchow str. SL491 0.00 3847 0 S2 55400 Salmonella enterica subsp. enterica serovar Borreze 0.00 3847 3847 S3 1242089 Salmonella enterica subsp. enterica serovar Borreze str. SA20041063 0.00 3827 173 S2 604 Salmonella enterica subsp. enterica serovar Gallinarum/pullorum 0.00 2227 2227 S3 1081093 Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 0.00 1427 1427 S3 1225522 Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 0.00 3136 0 S2 1242083 Salmonella enterica subsp. enterica serovar Koessen 0.00 3136 3136 S3 1242105 Salmonella enterica subsp. enterica serovar Koessen str. S-1501 0.00 3044 2778 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 266 266 S3 866913 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 0.00 2446 2446 S2 399587 Salmonella enterica subsp. enterica serovar Rissen 0.00 2022 0 S2 1243599 Salmonella enterica subsp. enterica serovar Yovokome 0.00 2022 2022 S3 1243600 Salmonella enterica subsp. enterica serovar Yovokome str. S-1850 0.00 1776 1776 S2 356621 Salmonella enterica subsp. enterica serovar Westhampton 0.00 1732 1732 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 1647 1647 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 1635 0 S2 1160741 Salmonella enterica subsp. enterica serovar Crossness 0.00 1635 1635 S3 1242090 Salmonella enterica subsp. enterica serovar Crossness str. 1422-74 0.00 1150 1150 S2 932733 Salmonella enterica subsp. enterica serovar Bardo 0.00 1131 0 S2 29472 Salmonella enterica subsp. enterica serovar Panama 0.00 1131 1131 S3 1124961 Salmonella enterica subsp. enterica serovar Panama str. ATCC 7378 0.00 616 0 S2 399583 Salmonella enterica subsp. enterica serovar Blegdam 0.00 616 616 S3 1240694 Salmonella enterica subsp. enterica serovar Blegdam str. S-1824 0.00 428 428 S2 1911681 Salmonella enterica subsp. enterica serovar Hayindogo 0.00 170 170 S2 1160757 Salmonella enterica subsp. enterica serovar Lomita 0.00 145 145 S2 149390 Salmonella enterica subsp. enterica serovar London 0.00 39 39 S2 149384 Salmonella enterica subsp. enterica serovar Wien 0.00 17 17 S2 353569 Salmonella enterica subsp. enterica serovar 4,12:i:- 0.00 11 11 S2 794865 Salmonella enterica subsp. enterica serovar 6,7:d:- 0.01 1320559 387227 S1 59202 Salmonella enterica subsp. salamae 0.01 501758 0 S2 1243601 Salmonella enterica subsp. salamae serovar 55:k:z39 0.01 501758 501758 S3 1243602 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K 0.00 176921 176921 S2 297361 Salmonella enterica subsp. salamae serovar Greenside 0.00 116132 116132 S2 2500152 Salmonella enterica subsp. salamae serovar 42:r:- 0.00 98604 98604 S2 1710356 Salmonella enterica subsp. salamae serovar 57:z29:z42 0.00 39917 39917 S2 2577863 Salmonella enterica subsp. salamae serovar 56:z10:e,n,x 0.01 521918 279509 S1 59204 Salmonella enterica subsp. diarizonae 0.00 138818 138818 S2 1192842 Salmonella enterica subsp. diarizonae serovar 48:i:z 0.00 70207 0 S2 1243615 Salmonella enterica subsp. diarizonae serovar 65:c:z 0.00 70207 70207 S3 1243616 Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 0.00 17553 0 S2 1243611 Salmonella enterica subsp. diarizonae serovar 50:k:z 0.00 17553 17553 S3 1243612 Salmonella enterica subsp. diarizonae serovar 50:k:z str. MZ0080 0.00 13491 13491 S2 2760407 Salmonella enterica subsp. diarizonae serovar b,50:-:- 0.00 2340 2340 S2 2339227 Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) 0.00 264648 0 S1 59208 Salmonella enterica subsp. VII 0.00 264648 264648 S2 41520 Salmonella enterica subsp. VII serovar 1,40:g,z51:-- 0.00 235051 101138 S1 59203 Salmonella enterica subsp. arizonae 0.00 53460 0 S2 41515 Salmonella enterica subsp. arizonae serovar 62:z36:- 0.00 53460 53460 S3 1386967 Salmonella enterica subsp. arizonae serovar 62:z36:- str. RKS2983 0.00 44019 44019 S2 1243607 Salmonella enterica subsp. arizonae serovar 63:g,z51:- 0.00 36434 36434 S2 41514 Salmonella enterica subsp. arizonae serovar 62:z4,z23:- 0.00 219585 110744 S1 59205 Salmonella enterica subsp. houtenae 0.00 42319 42319 S2 58100 Salmonella enterica subsp. houtenae serovar Houten 0.00 35848 35848 S2 523831 Salmonella enterica subsp. houtenae str. ATCC BAA-1581 0.00 30674 30674 S2 1299291 Salmonella enterica subsp. houtenae str. CFSAN000552 0.00 8135 8135 S1 59207 Salmonella enterica subsp. indica 0.02 1510992 1382453 S 54736 Salmonella bongori 0.00 81525 0 S1 41527 Salmonella bongori serovar 48:z41:-- 0.00 81525 81525 S2 1382510 Salmonella bongori serovar 48:z41:-- str. RKS3044 0.00 35359 35359 S1 1197719 Salmonella bongori N268-08 0.00 11333 11333 S1 2577118 Salmonella bongori serovar 48:z81:- 0.00 180 180 S1 1299282 Salmonella bongori CFSAN000510 0.00 142 0 S1 59245 Salmonella bongori serovar 66:z41:- 0.00 142 142 S2 1243617 Salmonella bongori serovar 66:z41:- str. SA19983605 0.00 26470 64 G1 2614656 unclassified Salmonella 0.00 14742 14742 S 2686305 Salmonella sp. S13 0.00 5260 5260 S 2500542 Salmonella sp. SSDFZ54 0.00 2298 2298 S 2725417 Salmonella sp. SCFS4 0.00 1826 1826 S 599 Salmonella sp. 0.00 675 675 S 1179813 Salmonella sp. 40 0.00 668 668 S 2664291 Salmonella sp. HNK130 0.00 656 656 S 2500543 Salmonella sp. SSDFZ69 0.00 160 160 S 1179812 Salmonella sp. 14 0.00 121 121 S 1179814 Salmonella sp. 96A-29192 0.10 9121834 1432585 G 1330547 Kosakonia 0.02 1526801 41633 G1 2632876 unclassified Kosakonia 0.01 907246 907246 S 2725560 Kosakonia sp. SMBL-WEM22 0.01 577922 577922 S 2492396 Kosakonia sp. CCTCC M2018092 0.02 1505216 1216230 S 208223 Kosakonia cowanii 0.00 288986 288986 S1 1300165 Kosakonia cowanii JCM 10956 = DSM 18146 0.02 1465105 1196509 S 1158459 Kosakonia sacchari 0.00 268596 268596 S1 1235834 Kosakonia sacchari SP1 0.02 1354318 1234605 S 283686 Kosakonia radicincitans 0.00 119713 119713 S1 1177180 Kosakonia radicincitans DSM 16656 0.01 1061170 1061170 S 551989 Kosakonia arachidis 0.01 776639 776639 S 497725 Kosakonia oryzae 0.09 8089891 2014307 G 83654 Leclercia 0.04 3335435 1251882 G1 2627398 unclassified Leclercia 0.01 802320 802320 S 2714951 Leclercia sp. 29361 0.00 268599 268599 S 2681307 Leclercia sp. J807 0.00 255062 255062 S 2681308 Leclercia sp. 119287 0.00 249253 249253 S 2282310 Leclercia sp. W6 0.00 228953 228953 S 2282309 Leclercia sp. W17 0.00 138601 138601 S 1920114 Leclercia sp. LSNIH1 0.00 119177 119177 S 2681309 Leclercia sp. 1106151 0.00 21588 21588 S 1920116 Leclercia sp. LSNIH3 0.03 2740149 2740149 S 83655 Leclercia adecarboxylata 0.09 7724130 2586066 G 160674 Raoultella 0.02 1496791 1496791 S 575 Raoultella planticola 0.02 1433894 1433894 S 577 Raoultella terrigena 0.01 1284583 1252712 S 54291 Raoultella ornithinolytica 0.00 31871 31871 S1 1286170 Raoultella ornithinolytica B6 0.01 891333 891333 S 1259973 Raoultella electrica 0.00 31463 0 G1 2627600 unclassified Raoultella 0.00 31463 31463 S 2259647 Raoultella sp. X13 0.08 7634199 1854988 G 413496 Cronobacter 0.02 1650256 1469393 S 28141 Cronobacter sakazakii 0.00 137622 137622 S1 1138308 Cronobacter sakazakii ES15 0.00 34382 34382 S1 290339 Cronobacter sakazakii ATCC BAA-894 0.00 8859 8859 S1 956149 Cronobacter sakazakii SP291 0.01 984317 0 S 1163710 Cronobacter condimenti 0.01 984317 984317 S1 1073999 Cronobacter condimenti 1330 0.01 849935 0 S 413497 Cronobacter dublinensis 0.01 849935 0 S1 413498 Cronobacter dublinensis subsp. dublinensis 0.01 849935 849935 S2 1159554 Cronobacter dublinensis subsp. dublinensis LMG 23823 0.01 744336 0 S 413502 Cronobacter turicensis 0.01 744336 744336 S1 693216 Cronobacter turicensis z3032 0.01 556978 523771 S 413503 Cronobacter malonaticus 0.00 33207 33207 S1 1159491 Cronobacter malonaticus LMG 23826 0.01 550195 0 S 535744 Cronobacter universalis 0.01 550195 550195 S1 1074000 Cronobacter universalis NCTC 9529 0.00 260689 0 G1 2649764 unclassified Cronobacter 0.00 260689 260689 S 1906275 Cronobacter sp. JZ38 0.00 182505 0 S 413501 Cronobacter muytjensii 0.00 182505 182505 S1 1159613 Cronobacter muytjensii ATCC 51329 0.07 6292283 156393 G 158483 Cedecea 0.04 3875249 3875249 S 158822 Cedecea neteri 0.01 1195728 0 G1 2649846 unclassified Cedecea 0.01 1195728 1195728 S 2545798 Cedecea sp. FDAARGOS_727 0.01 1064913 1064913 S 158823 Cedecea lapagei 0.05 4264927 441533 F1 36866 unclassified Enterobacteriaceae 0.01 1152648 1152648 S 693444 Enterobacteriaceae bacterium strain FGI 57 0.01 696894 696894 S 2066051 Enterobacteriaceae bacterium ENNIH1 0.01 607892 607892 S 891974 Plautia stali symbiont 0.00 172909 172909 S 2045202 Enterobacteriaceae bacterium A-F18 0.00 79672 79672 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 78177 78177 S 2675791 Enterobacteriaceae endosymbiont of Macroplea mutica 0.00 77061 77061 S 2675790 Enterobacteriaceae endosymbiont of Macroplea appendiculata 0.00 56828 56828 S 2675794 Enterobacteriaceae endosymbiont of Plateumaris consimilis 0.00 56056 56056 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.00 55019 55019 S 2675796 Enterobacteriaceae endosymbiont of Plateumaris rustica 0.00 51684 51684 S 2675795 Enterobacteriaceae endosymbiont of Plateumaris pusilla 0.00 51553 51553 S 2675781 Enterobacteriaceae endosymbiont of Donacia provostii 0.00 51505 51505 S 2675797 Enterobacteriaceae endosymbiont of Plateumaris sericea 0.00 48141 48141 S 2675785 Enterobacteriaceae endosymbiont of Donacia sparganii 0.00 48071 48071 S 2675772 Enterobacteriaceae endosymbiont of Donacia bicoloricornis 0.00 46472 46472 S 2675786 Enterobacteriaceae endosymbiont of Donacia thalassina 0.00 46369 46369 S 2675779 Enterobacteriaceae endosymbiont of Donacia marginata 0.00 44767 44767 S 2675773 Enterobacteriaceae endosymbiont of Donacia cincticornis 0.00 44146 44146 S 2675789 Enterobacteriaceae endosymbiont of Donacia vulgaris 0.00 41969 41969 S 2675782 Enterobacteriaceae endosymbiont of Donacia proxima 0.00 41925 41925 S 2675774 Enterobacteriaceae endosymbiont of Donacia cinerea 0.00 40116 40116 S 2675776 Enterobacteriaceae endosymbiont of Donacia crassipes 0.00 39890 39890 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.00 38337 38337 S 2675784 Enterobacteriaceae endosymbiont of Donacia simplex 0.00 33538 33538 S 2675783 Enterobacteriaceae endosymbiont of Donacia semicuprea 0.00 32881 32881 S 2675775 Enterobacteriaceae endosymbiont of Donacia clavipes 0.00 25620 25620 S 2052938 Enterobacteriaceae bacterium S05 0.00 24917 24917 S 2675777 Enterobacteriaceae endosymbiont of Donacia dentata 0.00 24467 24467 S 2675788 Enterobacteriaceae endosymbiont of Donacia versicolorea 0.00 11167 11167 S 1920109 Enterobacteriaceae bacterium ENNIH2 0.00 2703 2703 S 1920128 Enterobacteriaceae bacterium ENNIH3 0.05 4217068 0 F1 191675 Enterobacteriaceae incertae sedis 0.05 4217068 5801 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.02 1858548 63 F3 146507 aphid secondary symbionts 0.01 1141842 0 G 568987 Candidatus Hamiltonella 0.01 1141842 948111 S 138072 Candidatus Hamiltonella defensa 0.00 189605 189605 S1 672795 Candidatus Hamiltonella defensa (Bemisia tabaci) 0.00 4126 4126 S1 572265 Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) 0.00 441354 441354 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 275289 275289 S 134287 secondary endosymbiont of Heteropsylla cubana 0.01 1236430 0 F3 84564 ant endosymbionts 0.01 1236430 144373 G 203804 Candidatus Blochmannia 0.01 577998 274 G1 711328 unclassified Candidatus Blochmannia endosymbionts 0.00 201761 201761 S 2681986 Blochmannia endosymbiont of Camponotus nipponensis 0.00 189365 189365 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 186598 186598 S 1505597 Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 0.00 186890 0 S 251535 Candidatus Blochmannia vafer 0.00 186890 186890 S1 859654 Candidatus Blochmannia vafer str. BVAF 0.00 183198 183198 S 203907 Candidatus Blochmannia floridanus 0.00 72419 0 S 101534 Candidatus Blochmannia pennsylvanicus 0.00 72419 72419 S1 291272 Candidatus Blochmannia pennsylvanicus str. BPEN 0.00 71552 0 S 251542 Candidatus Blochmannia chromaiodes 0.00 71552 71552 S1 1240471 Candidatus Blochmannia chromaiodes str. 640 0.00 259179 0 G 1906657 Candidatus Doolittlea 0.00 259179 259179 S 1778262 Candidatus Doolittlea endobia 0.00 246469 0 G 1906661 Candidatus Gullanella 0.00 246469 246469 S 1070130 Candidatus Gullanella endobia 0.00 189092 0 G 1906659 Candidatus Hoaglandella 0.00 189092 189092 S 1778263 Candidatus Hoaglandella endobia 0.00 141098 0 G 1682492 Candidatus Tachikawaea 0.00 141098 141098 S 1410383 Candidatus Tachikawaea gelatinosa 0.00 90151 0 G 1906660 Candidatus Mikella 0.00 90151 90151 S 1778264 Candidatus Mikella endobia 0.00 77395 0 G 472825 Candidatus Purcelliella 0.00 77395 77395 S 472834 Candidatus Purcelliella pentastirinorum 0.00 75574 0 F3 199891 mealybug secondary endosymbionts 0.00 75574 75574 S 1835721 secondary endosymbiont of Trabutina mannipara 0.00 37331 0 G 1302410 Candidatus Annandia 0.00 37331 37331 S 1302411 Candidatus Annandia adelgestsuga 0.04 3753180 16226 G 1330545 Lelliottia 0.02 1967452 1967452 S 61646 Lelliottia amnigena 0.01 961896 961896 S 1907578 Lelliottia jeotgali 0.00 441029 0 G1 2642424 unclassified Lelliottia 0.00 441029 441029 S 2153385 Lelliottia sp. WB101 0.00 366577 366577 S 69220 Lelliottia nimipressuralis 0.03 3142035 3637 G 1330546 Pluralibacter 0.02 1691962 1691962 S 61647 Pluralibacter gergoviae 0.02 1446436 1125715 S 1334193 [Enterobacter] lignolyticus 0.00 320721 320721 S1 701347 [Enterobacter] lignolyticus SCF1 0.03 2728927 63430 G 82976 Buttiauxella 0.02 1457301 0 G1 2634062 unclassified Buttiauxella 0.02 1457301 1457301 S 2479367 Buttiauxella sp. 3AFRM03 0.01 1208196 1208196 S 82977 Buttiauxella agrestis 0.03 2585975 11630 G 579 Kluyvera 0.02 1425223 1425223 S 61648 Kluyvera intermedia 0.01 1149048 0 G1 2619995 unclassified Kluyvera 0.01 1149048 1149048 S 2705459 Kluyvera sp. PO2S7 0.00 40 40 S 580 Kluyvera cryocrescens 0.00 34 34 S 51288 Kluyvera ascorbata 0.02 1623296 0 G 1903434 Atlantibacter 0.02 1623296 1623296 S 565 Atlantibacter hermannii 0.02 1511023 0 G 929812 Gibbsiella 0.02 1511023 1511023 S 929813 Gibbsiella quercinecans 0.02 1447947 0 G 1780190 Izhakiella 0.02 1447947 0 G1 2635528 unclassified Izhakiella 0.02 1447947 1447947 S 2579935 Izhakiella sp. KSNA2 0.01 1286493 0 G 158876 Yokenella 0.01 1286493 1286493 S 158877 Yokenella regensburgei 0.01 1191918 0 G 2726810 Scandinavium 0.01 1191918 1191918 S 1851514 Scandinavium goeteborgense 0.01 1133063 0 G 1335483 Shimwellia 0.01 1133063 1132990 S 563 Shimwellia blattae 0.00 73 73 S1 630626 Shimwellia blattae DSM 4481 = NBRC 105725 0.01 1111806 185488 G 620 Shigella 0.00 385138 355594 S 622 Shigella dysenteriae 0.00 26496 26496 S1 754093 Shigella dysenteriae 1617 0.00 2609 2609 S1 300267 Shigella dysenteriae Sd197 0.00 439 439 S1 984897 Shigella dysenteriae 1 0.00 285501 276501 S 621 Shigella boydii 0.00 5143 5143 S1 344609 Shigella boydii CDC 3083-94 0.00 3857 3857 S1 300268 Shigella boydii Sb227 0.00 251235 211043 S 623 Shigella flexneri 0.00 11502 4962 S1 42897 Shigella flexneri 2a 0.00 4924 4924 S2 198214 Shigella flexneri 2a str. 301 0.00 1616 1616 S2 198215 Shigella flexneri 2a str. 2457T 0.00 5861 5861 S1 374923 Shigella flexneri 1a 0.00 5283 5283 S1 424720 Shigella flexneri Y 0.00 4598 4598 S1 1617964 Shigella flexneri 4c 0.00 3418 0 S1 373383 Shigella flexneri 5 0.00 3418 3418 S2 373384 Shigella flexneri 5 str. 8401 0.00 2885 2885 S1 1282357 Shigella flexneri 2003036 0.00 1644 1644 S1 1282358 Shigella flexneri Shi06HN006 0.00 1562 0 S1 424718 Shigella flexneri 5a 0.00 1562 1562 S2 1086030 Shigella flexneri 5a str. M90T 0.00 1535 1535 S1 591020 Shigella flexneri 2002017 0.00 1172 1172 S1 1435046 Shigella flexneri G1663 0.00 556 556 S1 1935181 Shigella flexneri 1c 0.00 163 163 S1 2049486 Shigella flexneri 7b 0.00 13 13 S1 1288825 Shigella flexneri 2b 0.00 3848 3848 S 624 Shigella sonnei 0.00 596 0 G1 2629414 unclassified Shigella 0.00 463 463 S 1072658 Shigella sp. MO17 0.00 81 81 S 1813821 Shigella sp. PAMC 28760 0.00 52 52 S 1072659 Shigella sp. LN126 0.01 1035777 0 G 2172100 Limnobaculum 0.01 1035777 1035777 S 2172103 Limnobaculum parvum 0.01 938842 0 G 2055880 Pseudescherichia 0.01 938842 938842 S 566 Pseudescherichia vulneris 0.00 358045 562 G 401618 Candidatus Riesia 0.00 197181 195826 S 401619 Candidatus Riesia pediculicola 0.00 1355 1355 S1 515618 Candidatus Riesia pediculicola USDA 0.00 160302 160302 S 428411 Candidatus Riesia pediculischaeffi 0.00 209517 0 G 409304 Candidatus Ishikawaella 0.00 209517 0 S 168169 Candidatus Ishikawaella capsulata 0.00 209517 209517 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 192431 0 G 2055876 Metakosakonia 0.00 192431 0 G1 2639707 unclassified Metakosakonia 0.00 192431 192431 S 2487150 Metakosakonia sp. MRY16-398 0.00 164150 0 G 1048757 Candidatus Moranella 0.00 164150 160052 S 1048758 Candidatus Moranella endobia 0.00 2077 2077 S1 903503 Candidatus Moranella endobia PCIT 0.00 2021 2021 S1 1234603 Candidatus Moranella endobia PCVAL 0.88 79701801 327274 F 1903411 Yersiniaceae 0.47 42571851 12623992 G 613 Serratia 0.08 7401230 7165190 S 615 Serratia marcescens 0.00 101221 101221 S1 1334564 Serratia marcescens SM39 0.00 64433 64433 S1 435998 Serratia marcescens WW4 0.00 56679 56679 S1 273526 Serratia marcescens subsp. marcescens Db11 0.00 13707 13707 S1 1401254 Serratia marcescens SMB2099 0.05 4279396 108162 G1 2647522 unclassified Serratia 0.02 1469671 1469671 S 104623 Serratia sp. ATCC 39006 0.01 492182 492182 S 2597702 Serratia sp. KUDC3025 0.00 401275 401275 S 2420306 Serratia sp. FDAARGOS_506 0.00 383888 383888 S 671990 Serratia sp. FGI94 0.00 379602 379602 S 2448483 Serratia sp. 3ACOL1 0.00 248626 248626 S 2447890 Serratia sp. 1D1416 0.00 235015 235015 S 2482769 Serratia sp. P2ACOL2 0.00 131319 131319 S 2724469 Serratia sp. JUb9 0.00 130342 130342 S 1327989 Serratia sp. FS14 0.00 92625 92625 S 2033438 Serratia sp. MYb239 0.00 73147 73147 S 488142 Serratia sp. SCBI 0.00 63375 63375 S 1758196 Serratia sp. SSNIH1 0.00 36745 36745 S 2485839 Serratia sp. LS-1 0.00 33313 33313 S 1938820 Serratia sp. JKS000199 0.00 68 68 S 768493 Serratia sp. AS13 0.00 41 41 S 768490 Serratia sp. AS12 0.05 4061521 4061521 S 47917 Serratia fonticola 0.04 3699568 2670847 S 82996 Serratia plymuthica 0.01 701579 701579 S1 1154756 Serratia plymuthica PRI-2C 0.00 229794 229794 S1 682634 Serratia plymuthica 4Rx13 0.00 49712 49712 S1 1006598 Serratia plymuthica RVH1 0.00 47623 47623 S1 1348660 Serratia plymuthica S13 0.00 13 13 S1 768492 Serratia plymuthica AS9 0.03 2360515 1894783 S 138074 Serratia symbiotica 0.01 465732 465732 S1 568817 Serratia symbiotica str. 'Cinara cedri' 0.02 1534414 1392588 S 614 Serratia liquefaciens 0.00 141826 141826 S1 1346614 Serratia liquefaciens ATCC 27592 0.02 1476343 1476343 S 61652 Serratia rubidaea 0.01 1327898 1327898 S 618 Serratia odorifera 0.01 1255201 1255201 S 82995 Serratia grimesii 0.01 1090991 856560 S 28151 Serratia proteamaculans 0.00 234431 234431 S1 399741 Serratia proteamaculans 568 0.01 562415 562415 S 2741499 Serratia surfactantfaciens 0.01 529641 529641 S 137545 Serratia quinivorans 0.00 155555 155555 S 61651 Serratia ficaria 0.00 106193 106193 S 300181 Serratia ureilytica 0.00 61041 61041 S 458197 Serratia nematodiphila 0.00 45937 45937 S 42906 Serratia entomophila 0.28 25079496 6657196 G 629 Yersinia 0.04 3333867 1327030 G1 1649845 Yersinia pseudotuberculosis complex 0.01 950131 814446 S 633 Yersinia pseudotuberculosis 0.00 76693 76693 S1 349747 Yersinia pseudotuberculosis IP 31758 0.00 29857 0 S1 109458 Yersinia pseudotuberculosis (type O:1b) 0.00 29857 29857 S2 748672 Yersinia pseudotuberculosis str. PA3606 0.00 20651 20651 S1 273123 Yersinia pseudotuberculosis IP 32953 0.00 8464 8464 S1 502801 Yersinia pseudotuberculosis PB1/+ 0.00 20 20 S1 502800 Yersinia pseudotuberculosis YPIII 0.01 856109 856109 S 367190 Yersinia similis 0.00 200597 156880 S 632 Yersinia pestis 0.00 10920 10920 S1 637386 Yersinia pestis Z176003 0.00 10321 10321 S1 349746 Yersinia pestis Angola 0.00 3931 3931 S1 637385 Yersinia pestis D182038 0.00 3444 0 S1 385964 Yersinia pestis subsp. pestis 0.00 3444 2934 S2 1234662 Yersinia pestis subsp. pestis bv. Medievalis 0.00 510 510 S3 547048 Yersinia pestis biovar Medievalis str. Harbin 35 0.00 2916 0 S1 1234659 Yersinia pestis subsp. microtus 0.00 2916 2916 S2 229193 Yersinia pestis biovar Microtus str. 91001 0.00 2629 2629 S1 637382 Yersinia pestis D106004 0.00 1797 1797 S1 1345702 Yersinia pestis 2944 0.00 1674 1674 S1 360102 Yersinia pestis Antiqua 0.00 860 860 S1 1035377 Yersinia pestis A1122 0.00 775 775 S1 1345707 Yersinia pestis 3770 0.00 602 602 S1 1345710 Yersinia pestis 1045 0.00 585 585 S1 214092 Yersinia pestis CO92 0.00 424 424 S1 1345708 Yersinia pestis 8787 0.00 407 407 S1 748678 Yersinia pestis str. Pestoides B 0.00 390 390 S1 1345701 Yersinia pestis 790 0.00 383 383 S1 187410 Yersinia pestis KIM10+ 0.00 359 359 S1 386656 Yersinia pestis Pestoides F 0.00 344 344 S1 1345705 Yersinia pestis 1522 0.00 234 234 S1 377628 Yersinia pestis Nepal516 0.00 213 213 S1 1345706 Yersinia pestis 3067 0.00 186 186 S1 649716 Yersinia pestis Pestoides G 0.00 186 186 S1 1345704 Yersinia pestis 1413 0.00 105 105 S1 1345703 Yersinia pestis 1412 0.00 32 32 S1 880632 Yersinia pestis Java 9 0.03 3084593 2552107 S 630 Yersinia enterocolitica 0.00 338646 338646 S1 1443113 Yersinia enterocolitica LC20 0.00 177733 0 S1 34053 Yersinia enterocolitica (type O:5) 0.00 177733 177733 S2 1262462 Yersinia enterocolitica (type O:5) str. YE53/03 0.00 10550 6656 S1 150053 Yersinia enterocolitica subsp. palearctica 0.00 3187 3187 S2 994476 Yersinia enterocolitica subsp. palearctica 105.5R(r) 0.00 707 707 S2 930944 Yersinia enterocolitica subsp. palearctica Y11 0.00 5022 4985 S1 150052 Yersinia enterocolitica subsp. enterocolitica 0.00 37 37 S2 393305 Yersinia enterocolitica subsp. enterocolitica 8081 0.00 535 0 S1 34055 Yersinia enterocolitica (type O:9) 0.00 535 535 S2 913028 Yersinia enterocolitica W22703 0.02 1659251 1659251 S 29486 Yersinia ruckeri 0.02 1503282 1486103 S 29484 Yersinia frederiksenii 0.00 17179 17179 S1 1454377 Yersinia frederiksenii Y225 0.01 1164235 1164235 S 935293 Yersinia entomophaga 0.01 1108673 1108673 S 29485 Yersinia rohdei 0.01 1102428 0 S 29483 Yersinia aldovae 0.01 1102428 1102428 S1 1453495 Yersinia aldovae 670-83 0.01 1083179 1083179 S 28152 Yersinia kristensenii 0.01 1072867 0 S 33060 Yersinia mollaretii 0.01 1072867 1072867 S1 349967 Yersinia mollaretii ATCC 43969 0.01 1030031 1030031 S 2607663 Yersinia canariae 0.01 867424 867424 S 263819 Yersinia aleksiciae 0.00 408589 408589 S 631 Yersinia intermedia 0.00 360672 360672 S 2339259 Yersinia hibernica 0.00 326300 326300 S 419257 Yersinia massiliensis 0.00 174966 0 G1 2653513 unclassified Yersinia 0.00 174960 174960 S 1179669 Yersinia sp. KBS0713 0.00 6 6 S 1839800 Yersinia sp. FDAARGOS_228 0.00 141943 0 S 634 Yersinia bercovieri 0.00 141943 141943 S1 349968 Yersinia bercovieri ATCC 43970 0.06 5011408 1508602 G 34037 Rahnella 0.02 1915082 613478 S 34038 Rahnella aquatilis 0.01 1186854 1186854 S1 745277 Rahnella aquatilis CIP 78.65 = ATCC 33071 0.00 114750 114750 S1 1151116 Rahnella aquatilis HX2 0.02 1587107 580 G1 2635087 unclassified Rahnella 0.02 1474355 1474355 S 1805933 Rahnella sp. ERMR1:05 0.00 102922 102922 S 741091 Rahnella sp. Y9602 0.00 2564 2564 S 657335 Rahnella sp. WMR114 0.00 1609 1609 S 657339 Rahnella sp. WMR104 0.00 1241 1241 S 657337 Rahnella sp. WMR66 0.00 1179 1179 S 657338 Rahnella sp. WMR121 0.00 1098 1098 S 657334 Rahnella sp. WMR42 0.00 814 814 S 360016 Rahnella sp. 'WMR15' 0.00 745 745 S 657336 Rahnella sp. WMR120 0.00 617 617 S 58169 Rahnella inusitata 0.02 1566853 0 G 1745211 Chania 0.02 1566853 0 S 1639108 Chania multitudinisentens 0.02 1566853 1566853 S1 1441930 Chania multitudinisentens RB-25 0.02 1481458 0 G 1565532 Rouxiella 0.02 1481458 1481458 S 1646377 Rouxiella badensis 0.02 1446693 0 G 41201 Ewingella 0.02 1446693 1446693 S 41202 Ewingella americana 0.02 1388015 0 G 1964366 Nissabacter 0.02 1388015 0 G1 2636213 unclassified Nissabacter 0.02 1388015 1388015 S 2126321 Nissabacter sp. SGAir0207 0.01 828753 0 G 1927833 Candidatus Fukatsuia 0.01 828753 828753 S 1878942 Candidatus Fukatsuia symbiotica 0.59 52896022 321188 F 1903409 Erwiniaceae 0.28 25070310 1881553 G 53335 Pantoea 0.08 6935979 16160 G1 2630326 unclassified Pantoea 0.02 1768633 1768633 S 592316 Pantoea sp. At-9b 0.02 1417879 1417879 S 2490851 Pantoea sp. CCBC3-3-1 0.01 1344290 1344290 S 2575375 Pantoea sp. SO10 0.01 1195462 1195462 S 2479547 Pantoea sp. 201603H 0.01 1053086 1053086 S 1484158 Pantoea sp. PSNIH1 0.00 140469 140469 S 2768165 Pantoea sp. MT58 0.04 3792834 3526365 S 470934 Pantoea vagans 0.00 266469 266469 S1 712898 Pantoea vagans C9-1 0.04 3335547 3009766 S 553 Pantoea ananatis 0.00 98093 98093 S1 1123863 Pantoea ananatis LMG 5342 0.00 97566 97566 S1 1095774 Pantoea ananatis PA13 0.00 65886 65886 S1 706191 Pantoea ananatis LMG 20103 0.00 64236 64236 S1 932677 Pantoea ananatis AJ13355 0.03 2734173 0 G1 1654067 Pantoea agglomerans group 0.03 2734173 2734173 S 549 Pantoea agglomerans 0.02 1866796 1866796 S 59814 Pantoea dispersa 0.02 1779371 1336160 S 66269 Pantoea stewartii 0.00 443211 0 S1 66271 Pantoea stewartii subsp. stewartii 0.00 443211 443211 S2 660596 Pantoea stewartii subsp. stewartii DC283 0.01 1143924 1143924 S 1891675 Pantoea alhagi 0.01 1101034 1101034 S 1076550 Pantoea rwandensis 0.00 329796 329796 S 1235990 Candidatus Pantoea carbekii 0.00 169303 169303 S 470933 Pantoea eucalypti 0.14 12532360 1982378 G 551 Erwinia 0.03 2637145 2637145 S 1922217 Candidatus Erwinia haradaeae 0.02 1920651 2419 G1 2622719 unclassified Erwinia 0.01 1300170 1300170 S 2681984 Erwinia sp. J780 0.00 321938 321938 S 215689 Erwinia sp. Ejp617 0.00 295747 295747 S 2547962 Erwinia sp. QL-Z3 0.00 377 377 S 231374 Erwinia sp. Ejp 556 0.02 1377791 1377791 S 55211 Erwinia persicina 0.01 1226833 1226833 S 1619313 Erwinia gerundensis 0.01 1074793 0 S 338565 Erwinia tasmaniensis 0.01 1074793 1074793 S1 465817 Erwinia tasmaniensis Et1/99 0.01 1023490 971399 S 552 Erwinia amylovora 0.00 23456 23456 S1 1407064 Erwinia amylovora LA637 0.00 22121 22121 S1 716540 Erwinia amylovora ATCC 49946 0.00 2727 2727 S1 889211 Erwinia amylovora ATCC BAA-2158 0.00 2724 2724 S1 1255309 Erwinia amylovora Ea644 0.00 631 631 S1 665029 Erwinia amylovora CFBP1430 0.00 186 186 S1 1407063 Erwinia amylovora LA636 0.00 116 116 S1 1407062 Erwinia amylovora LA635 0.00 103 103 S1 1027397 Erwinia amylovora ACW56400 0.00 18 18 S1 1255305 Erwinia amylovora CFBP 2585 0.00 9 9 S1 1255303 Erwinia amylovora Ea356 0.01 920699 536568 S 182337 Erwinia billingiae 0.00 384131 384131 S1 634500 Erwinia billingiae Eb661 0.00 358157 356656 S 79967 Erwinia pyrifoliae 0.00 1068 1068 S1 634499 Erwinia pyrifoliae Ep1/96 0.00 433 433 S1 644651 Erwinia pyrifoliae DSM 12163 0.00 10423 0 S 665097 Erwinia piriflorinigrans 0.00 10423 10423 S1 1161919 Erwinia piriflorinigrans CFBP 5888 0.06 5459715 0 G 32199 Buchnera 0.06 5459715 659247 S 9 Buchnera aphidicola 0.00 142497 142497 S1 118103 Buchnera aphidicola (Melaphis rhois) 0.00 139918 139918 S1 1241859 Buchnera aphidicola (Hyadaphis tataricae) 0.00 138518 0 S1 135842 Buchnera aphidicola (Baizongia pistaciae) 0.00 138518 138518 S2 224915 Buchnera aphidicola str. Bp (Baizongia pistaciae) 0.00 134487 134487 S1 118110 Buchnera aphidicola (Schlechtendalia chinensis) 0.00 124581 124581 S1 1241869 Buchnera aphidicola (Muscaphis stroyani) 0.00 122619 122619 S1 118101 Buchnera aphidicola (Diuraphis noxia) 0.00 121904 121904 S1 1241860 Buchnera aphidicola (Hyperomyzus lactucae) 0.00 120207 119148 S1 98795 Buchnera aphidicola (Myzus persicae) 0.00 498 498 S2 1009859 Buchnera aphidicola str. F009 (Myzus persicae) 0.00 350 350 S2 1009858 Buchnera aphidicola str. G002 (Myzus persicae) 0.00 119 119 S2 1009856 Buchnera aphidicola str. USDA (Myzus persicae) 0.00 92 92 S2 1009857 Buchnera aphidicola str. W106 (Myzus persicae) 0.00 119840 119840 S1 557993 Buchnera aphidicola (Brachycaudus cardui) 0.00 118192 118192 S1 2173854 Buchnera aphidicola (Melanaphis sacchari) 0.00 118151 118151 S1 1258543 Buchnera aphidicola (Lipaphis pseudobrassicae) 0.00 115012 115012 S1 571428 Buchnera aphidicola (Sitobion avenae) 0.00 113638 113638 S1 1241836 Buchnera aphidicola (Artemisaphis artemisicola) 0.00 112953 112953 S1 118118 Buchnera aphidicola (Uroleucon sonchi) 0.00 112203 112203 S1 911343 Buchnera aphidicola (Brevicoryne brassicae) 0.00 111806 111806 S1 1241865 Buchnera aphidicola (Macrosiphoniella sanborni) 0.00 111441 111441 S1 2495405 Buchnera aphidicola (Nipponaphis monzeni) 0.00 110385 110385 S1 1265350 Buchnera aphidicola (Aphis glycines) 0.00 109140 109140 S1 98785 Buchnera aphidicola (Aphis gossypii) 0.00 108228 0 S1 668607 Buchnera aphidicola (Acyrthosiphon kondoi) 0.00 108228 108228 S2 1005090 Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) 0.00 107980 0 S1 118117 Buchnera aphidicola (Uroleucon ambrosiae) 0.00 107980 107980 S2 1005057 Buchnera aphidicola str. Ua (Uroleucon ambrosiae) 0.00 107811 107507 S1 98794 Buchnera aphidicola (Schizaphis graminum) 0.00 304 304 S2 198804 Buchnera aphidicola str. Sg (Schizaphis graminum) 0.00 105596 105596 S1 1241835 Buchnera aphidicola (Aphis nerii) 0.00 104017 104017 S1 2315802 Buchnera aphidicola (Aphis helianthi) 0.00 103834 103834 S1 1241834 Buchnera aphidicola (Aphis nasturtii) 0.00 102694 102694 S1 118109 Buchnera aphidicola (Rhopalosiphum maidis) 0.00 101605 101605 S1 98793 Buchnera aphidicola (Rhopalosiphum padi) 0.00 97310 97310 S1 1241833 Buchnera aphidicola (Anoecia oenotherae) 0.00 96967 96967 S1 2315801 Buchnera aphidicola (Macrosiphum gaurae) 0.00 96345 96345 S1 1241832 Buchnera aphidicola (Acyrthosiphon lactucae) 0.00 94351 94351 S1 1315998 Buchnera aphidicola (Thelaxes californica) 0.00 91791 91791 S1 571430 Buchnera aphidicola (Aphis fabae) 0.00 87885 87885 S1 1507522 Buchnera aphidicola (Macrosiphum euphorbiae) 0.00 87543 87543 S1 1241878 Buchnera aphidicola (Sarucallis kahawaluokalani) 0.00 79656 79656 S1 1921549 Buchnera aphidicola (Cinara strobi) 0.00 78056 78056 S1 1878935 Buchnera aphidicola (Cinara confinis) 0.00 76622 76622 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.00 75784 75784 S1 655384 Buchnera aphidicola (Cinara pseudotaxifoliae) 0.00 75432 75432 S1 1660040 Buchnera aphidicola (Cinara cuneomaculata) 0.00 71224 71224 S1 2518976 Buchnera aphidicola (Cinara kochiana kochiana) 0.00 66810 66810 S1 2518977 Buchnera aphidicola (Cinara laricifoliae) 0.00 64837 64837 S1 1660043 Buchnera aphidicola (Cinara piceae) 0.00 63537 63537 S1 2518980 Buchnera aphidicola (Cinara cf. splendens/pseudotsugae 3390) 0.00 62846 62846 S1 2518979 Buchnera aphidicola (Cinara splendens) 0.00 62313 62313 S1 98804 Buchnera aphidicola (Tuberolachnus salignus) 0.00 59908 59908 S1 1241884 Buchnera aphidicola (Therioaphis trifolii) 0.00 55516 0 S1 261318 Buchnera aphidicola (Cinara cedri) 0.00 55516 55516 S2 372461 Buchnera aphidicola BCc 0.00 49263 49263 S1 2518975 Buchnera aphidicola (Cinara curvipes) 0.00 48838 48838 S1 2518974 Buchnera aphidicola (Cinara curtihirsuta) 0.00 16936 5002 S1 118099 Buchnera aphidicola (Acyrthosiphon pisum) 0.00 6903 6903 S2 107806 Buchnera aphidicola str. APS (Acyrthosiphon pisum) 0.00 2513 2513 S2 713601 Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) 0.00 2488 2488 S2 561501 Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) 0.00 30 30 S2 593275 Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum) 0.00 794 794 S1 2559115 Buchnera aphidicola (Aphis craccivore) 0.00 608 608 S1 466616 Buchnera aphidicola (Aphis craccivora) 0.00 39 39 S1 563178 Buchnera aphidicola str. 5A (Acyrthosiphon pisum) 0.05 4489181 260447 G 2100764 Mixta 0.01 1159685 1159685 S 1615494 Mixta intestinalis 0.01 1063525 1063525 S 1458355 Mixta theicola 0.01 1030501 1030501 S 665914 Mixta gaviniae 0.01 975023 975023 S 665913 Mixta calida 0.04 3406308 7724 G 82986 Tatumella 0.01 1345520 1345520 S 53336 Tatumella citrea 0.01 1045886 1045886 S 82987 Tatumella ptyseos 0.01 1006088 0 G1 2649542 unclassified Tatumella 0.01 1006088 1006088 S 2487345 Tatumella sp. TA1 0.00 1090 1090 S 642227 Tatumella morbirosei 0.01 1350024 0 F1 1971634 unclassified Erwiniaceae 0.01 1350024 1350024 S 2740817 Erwiniaceae bacterium PD-1 0.00 266936 0 G 51228 Wigglesworthia 0.00 266936 391 S 51229 Wigglesworthia glossinidia 0.00 146047 0 S1 36868 Wigglesworthia glossinidia endosymbiont of Glossina morsitans 0.00 146047 146047 S2 1142511 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 0.00 120498 120498 S1 36870 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 0.49 44198947 335748 F 1903414 Morganellaceae 0.18 15926832 3600058 G 586 Providencia 0.04 3790430 3622752 S 587 Providencia rettgeri 0.00 167678 167678 S1 1141663 Providencia rettgeri Dmel1 0.02 1928289 1862661 S 588 Providencia stuartii 0.00 65628 65628 S1 1157951 Providencia stuartii MRSN 2154 0.02 1487105 1487105 S 333962 Providencia heimbachae 0.02 1370810 1370810 S 158850 Providencia rustigianii 0.01 1304861 1304861 S 126385 Providencia alcalifaciens 0.01 1201558 1201558 S 333965 Providencia vermicola 0.01 1016822 0 S 516075 Providencia sneebia 0.01 1016822 1016822 S1 1141660 Providencia sneebia DSM 19967 0.00 226899 136227 G1 2633465 unclassified Providencia 0.00 89597 89597 S 2027290 Providencia sp. WCHPHu000369 0.00 943 943 S 2603245 Providencia sp. 1701091 0.00 80 80 S 2603244 Providencia sp. 1701011 0.00 52 52 S 2603246 Providencia sp. 1709051003 0.13 11303141 1607594 G 583 Proteus 0.04 3457715 3414696 S 584 Proteus mirabilis 0.00 22116 22116 S1 1266738 Proteus mirabilis BB2000 0.00 20903 20903 S1 529507 Proteus mirabilis HI4320 0.03 2904168 2904168 S 585 Proteus vulgaris 0.01 1168687 13624 G1 257482 unclassified Proteus 0.01 615655 615655 S 1921565 Proteus sp. CD3 0.01 538097 538097 S 2697019 Proteus sp. ZN5 0.00 1311 1311 S 1232493 Proteus sp. 3M 0.01 1019638 1019638 S 183417 Proteus hauseri 0.01 602591 602591 S 626774 Proteus cibarius 0.01 542737 542737 S 1987580 Proteus columbae 0.00 11 11 S 102862 Proteus penneri 0.08 7039325 186156 G 626 Xenorhabdus 0.02 2092374 1317015 S 40576 Xenorhabdus bovienii 0.01 775359 775359 S1 406818 Xenorhabdus bovienii SS-2004 0.02 1359098 1358244 S 628 Xenorhabdus nematophila 0.00 663 663 S1 406817 Xenorhabdus nematophila ATCC 19061 0.00 191 191 S1 1437823 Xenorhabdus nematophila AN6/1 0.01 1250979 1250979 S 351679 Xenorhabdus hominickii 0.01 1141253 1141253 S 351671 Xenorhabdus doucetiae 0.01 1009465 0 S 40577 Xenorhabdus poinarii 0.01 1009465 1009465 S1 1354304 Xenorhabdus poinarii G6 0.05 4462032 186003 G 29487 Photorhabdus 0.02 1619628 0 S 2218628 Photorhabdus laumondii 0.02 1619628 1619515 S1 141679 Photorhabdus laumondii subsp. laumondii 0.00 113 113 S2 243265 Photorhabdus laumondii subsp. laumondii TTO1 0.02 1367143 1367143 S 291112 Photorhabdus asymbiotica 0.01 1289258 1289258 S 230089 Photorhabdus thracensis 0.03 3077924 0 G 581 Morganella 0.03 3077924 2984972 S 582 Morganella morganii 0.00 92952 70187 S1 180434 Morganella morganii subsp. morganii 0.00 22765 22765 S2 1124991 Morganella morganii subsp. morganii KT 0.02 2053945 70018 G 637 Arsenophonus 0.01 1066604 1066604 S 638 Arsenophonus nasoniae 0.01 558026 558026 S 1231049 Arsenophonus endosymbiont of Aphis craccivora 0.00 180928 180928 S 634113 Candidatus Arsenophonus lipoptenae 0.00 178369 178369 S 235559 Arsenophonus endosymbiont of Aleurodicus dispersus 0.47 42759866 218265 F 1903410 Pectobacteriaceae 0.20 17817072 3995271 G 204037 Dickeya 0.05 4711311 3002994 S 204042 Dickeya zeae 0.01 455478 455478 S1 590409 Dickeya zeae Ech586 0.00 362891 362891 S1 1427366 Dickeya zeae EC1 0.00 242965 242965 S1 1223567 Dickeya zeae CSL RW192 0.00 213002 213002 S1 1224146 Dickeya zeae NCPPB 3531 0.00 165002 165002 S1 1224153 Dickeya zeae MK19 0.00 137105 137105 S1 1224147 Dickeya zeae NCPPB 3532 0.00 131874 131874 S1 1223573 Dickeya zeae NCPPB 2538 0.02 1996341 1116708 S 556 Dickeya chrysanthemi 0.01 532023 532023 S1 1223569 Dickeya chrysanthemi NCPPB 402 0.00 343537 343537 S1 1223571 Dickeya chrysanthemi NCPPB 516 0.00 3690 3690 S1 561229 Dickeya chrysanthemi Ech1591 0.00 383 383 S1 1224148 Dickeya chrysanthemi NCPPB 3533 0.02 1668407 888081 S 204038 Dickeya dadantii 0.00 418599 0 S1 204040 Dickeya dadantii subsp. dieffenbachiae 0.00 418599 418599 S2 1223574 Dickeya dadantii subsp. dieffenbachiae NCPPB 2976 0.00 191398 191398 S1 198628 Dickeya dadantii 3937 0.00 167381 167381 S1 1224149 Dickeya dadantii NCPPB 3537 0.00 2948 2948 S1 1223572 Dickeya dadantii NCPPB 898 0.01 1299547 1293985 S 69223 Dickeya paradisiaca 0.00 3140 3140 S1 579405 Dickeya paradisiaca Ech703 0.00 2422 2422 S1 1224150 Dickeya paradisiaca NCPPB 2511 0.01 1040651 928476 S 204039 Dickeya dianthicola 0.00 49624 49624 S1 1225780 Dickeya dianthicola IPO 980 0.00 45141 45141 S1 1226343 Dickeya dianthicola GBBC 2039 0.00 16594 16594 S1 1223570 Dickeya dianthicola NCPPB 3534 0.00 621 621 S1 1306405 Dickeya dianthicola RNS04.9 0.00 195 195 S1 1223568 Dickeya dianthicola NCPPB 453 0.01 1016574 1016574 S 568768 Dickeya poaceiphila 0.01 753567 34907 G1 2622466 unclassified Dickeya 0.01 524883 524883 S 568766 Dickeya sp. NCPPB 3274 0.00 91135 91135 S 2037915 Dickeya sp. Secpp 1600 0.00 84514 84514 S 1224145 Dickeya sp. MK7 0.00 17121 17121 S 1225785 Dickeya sp. DW 0440 0.00 1007 1007 S 1224144 Dickeya sp. CSL RW240 0.01 706411 704480 S 1089444 Dickeya solani 0.00 1045 1045 S1 1224151 Dickeya solani MK10 0.00 445 445 S1 1225786 Dickeya solani IPO 2222 0.00 282 282 S1 1224152 Dickeya solani MK16 0.00 142 142 S1 1226344 Dickeya solani GBBC 2040 0.00 17 17 S1 1240086 Dickeya solani RNS 08.23.3.1.A 0.01 623261 623261 S 1778540 Dickeya fangzhongdai 0.00 5731 5731 S 1401087 Dickeya aquatica 0.18 15853087 3674216 G 122277 Pectobacterium 0.03 2743975 400001 S 554 Pectobacterium carotovorum 0.03 2343974 1148434 S1 555 Pectobacterium carotovorum subsp. carotovorum 0.01 926293 926293 S2 561230 Pectobacterium carotovorum subsp. carotovorum PC1 0.00 269247 269247 S2 1218933 Pectobacterium carotovorum subsp. carotovorum PCC21 0.02 1691458 1605214 S 1905730 Pectobacterium parmentieri 0.00 86244 86244 S1 561231 Pectobacterium parmentieri WPP163 0.02 1568011 1568011 S 2042057 Pectobacterium polaris 0.02 1454624 1454624 S 180957 Pectobacterium brasiliense 0.01 1327667 1149258 S 29471 Pectobacterium atrosepticum 0.00 178409 178409 S1 218491 Pectobacterium atrosepticum SCRI1043 0.01 901597 901597 S 78398 Pectobacterium odoriferum 0.01 875459 875459 S 2108399 Pectobacterium punjabense 0.01 817054 0 S 55208 Pectobacterium wasabiae 0.01 817054 817054 S1 1175631 Pectobacterium wasabiae CFBP 3304 0.01 799026 799026 S 2488639 Pectobacterium versatile 0.04 3996224 1366720 G 71655 Brenneria 0.02 1510537 1510537 S 1109412 Brenneria goodwinii 0.01 1108184 1108184 S 55213 Brenneria rubrifaciens 0.00 10435 0 G1 2634434 unclassified Brenneria 0.00 10435 10435 S 598467 Brenneria sp. EniD312 0.00 348 0 S 55210 Brenneria nigrifluens 0.00 348 348 S1 1121120 Brenneria nigrifluens DSM 30175 = ATCC 13028 0.04 3752141 524640 G 84565 Sodalis 0.01 1159749 35011 S 63612 Sodalis glossinidius 0.01 1124738 1124738 S1 343509 Sodalis glossinidius str. 'morsitans' 0.01 1028549 1028549 S 1239307 Sodalis praecaptivus 0.01 543010 0 S 1486991 Candidatus Sodalis pierantonius 0.01 543010 543010 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.01 496193 496193 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.01 1123077 0 G 1082702 Lonsdalea 0.01 1123077 1123077 S 1082704 Lonsdalea britannica 0.12 10621636 612717 F 1903412 Hafniaceae 0.06 5358230 2004509 G 635 Edwardsiella 0.01 1102018 1096452 S 636 Edwardsiella tarda 0.00 5371 5371 S1 718251 Edwardsiella tarda FL6-60 0.00 195 195 S1 498217 Edwardsiella tarda EIB202 0.01 971155 971155 S 93378 Edwardsiella hoshinae 0.01 883646 882552 S 67780 Edwardsiella ictaluri 0.00 1094 1094 S1 634503 Edwardsiella ictaluri 93-146 0.00 296104 209811 S 1263550 Edwardsiella piscicida 0.00 86293 86293 S1 1288122 Edwardsiella piscicida C07-087 0.00 72707 4367 G1 2676541 unclassified Edwardsiella (in: Bacteria) 0.00 52408 52408 S 1578828 Edwardsiella sp. EA181011 0.00 15932 15932 S 1650654 Edwardsiella sp. LADL05-105 0.00 28091 0 S 1821960 Edwardsiella anguillarum 0.00 28091 28091 S1 667120 Edwardsiella anguillarum ET080813 0.04 3840932 866330 G 568 Hafnia 0.02 1616565 1378197 S 569 Hafnia alvei 0.00 238368 238368 S1 1453496 Hafnia alvei FB1 0.01 1262914 1262914 S 546367 Hafnia paralvei 0.00 95123 0 G1 2621980 unclassified Hafnia 0.00 95123 95123 S 1848580 Hafnia sp. CBA7124 0.01 809757 0 G 82982 Obesumbacterium 0.01 809757 809757 S 82983 Obesumbacterium proteus 0.04 4032457 2218 F 1903416 Budviciaceae 0.03 2842271 4270 G 82984 Pragia 0.02 1527102 1527102 S 82985 Pragia fontium 0.01 1310899 0 G1 2629891 unclassified Pragia 0.01 1310899 1310899 S 2498113 Pragia sp. CF-458 0.01 1187968 0 G 82980 Leminorella 0.01 1187968 1187968 S 158841 Leminorella richardii 0.04 3182393 22 O1 451511 Enterobacterales incertae sedis 0.02 2025353 0 G 702 Plesiomonas 0.02 2025353 2025353 S 703 Plesiomonas shigelloides 0.01 1157018 29446 G 447792 Phytobacter 0.01 823333 823333 S 1972431 Phytobacter ursingii 0.00 152329 0 G1 2625049 unclassified Phytobacter 0.00 152329 152329 S 1756993 Phytobacter sp. SCO41 0.00 151910 151910 S 395631 Phytobacter diazotrophicus 5.42 489018062 37055 O 72274 Pseudomonadales 4.48 404531057 1235135 F 135621 Pseudomonadaceae 4.38 395294443 66669456 G 286 Pseudomonas 1.03 93034831 16842715 G1 196821 unclassified Pseudomonas 0.02 1676751 1676751 S 1028989 Pseudomonas sp. StFLB209 0.02 1659742 1659742 S 2599595 Pseudomonas sp. NP-1 0.02 1556586 1556586 S 2725477 Pseudomonas sp. TUM18999 0.02 1507485 1507485 S 2320270 Pseudomonas sp. DG56-2 0.02 1470118 1470118 S 1981174 Pseudomonas sp. M30-35 0.02 1444223 1444223 S 1856685 Pseudomonas sp. TCU-HL1 0.02 1418261 1418261 S 1755504 Pseudomonas sp. DY-1 0.02 1383928 1383928 S 2604832 Pseudomonas sp. PE08 0.02 1380799 1380799 S 2653853 Pseudomonas sp. SCB32 0.01 1348848 1348848 S 143813 Pseudomonas sp. LAB-08 0.01 1331189 1331189 S 1930532 Pseudomonas sp. CC6-YY-74 0.01 1330427 1330427 S 1283291 Pseudomonas sp. URMO17WK12:I11 0.01 1304398 1304398 S 2049589 Pseudomonas sp. HLS-6 0.01 1295085 1295085 S 1736226 Pseudomonas sp. Leaf58 0.01 1293496 1293496 S 2054914 Pseudomonas sp. 02C 26 0.01 1287140 1287140 S 2498848 Pseudomonas sp. MPC6 0.01 1268606 1268606 S 1881017 Pseudomonas sp. 7SR1 0.01 1244399 1244399 S 2518644 Pseudomonas sp. SNU WT1 0.01 1235459 1235459 S 658630 Pseudomonas sp. CMR5c 0.01 1216718 1216718 S 2320867 Pseudomonas sp. K2W31S-8 0.01 1197613 1197613 S 2730847 Pseudomonas sp. ADAK13 0.01 1188231 1188231 S 1931241 Pseudomonas sp. S-6-2 0.01 1183995 1183995 S 2730848 Pseudomonas sp. ADAK18 0.01 1166962 1166962 S 2706126 Pseudomonas sp. OIL-1 0.01 1166484 1166484 S 1573704 Pseudomonas sp. R32 0.01 1147039 1147039 S 2505979 Pseudomonas sp. 11K1 0.01 1143492 1143492 S 1294143 Pseudomonas sp. ATCC 13867 0.01 1142138 1142138 S 2054919 Pseudomonas sp. S09G 359 0.01 1124560 1124560 S 2201356 Pseudomonas sp. 31-12 0.01 1116757 1116757 S 1573718 Pseudomonas sp. S34 0.01 1114315 1114315 S 1573711 Pseudomonas sp. R76 0.01 1112484 1112484 S 2052956 Pseudomonas sp. ACM7 0.01 1109747 1109747 S 1573719 Pseudomonas sp. S35 0.01 1108115 1108115 S 2073078 Pseudomonas sp. DTU12.3 0.01 1107078 1107078 S 1207075 Pseudomonas sp. UW4 0.01 1096814 1096814 S 2731681 Pseudomonas sp. S1-A32-2 0.01 1092418 1092418 S 2726989 Pseudomonas sp. gcc21 0.01 1080307 1080307 S 2748080 Pseudomonas sp. ABC1 0.01 1044976 1044976 S 2729423 Pseudomonas sp. SK 0.01 1034193 1034193 S 2735906 Pseudomonas sp. B11D7D 0.01 981729 981729 S 1573712 Pseudomonas sp. R84 0.01 964457 964457 S 2604941 Pseudomonas sp. C27(2019) 0.01 961640 961640 S 2219057 Pseudomonas sp. LG1E9 0.01 957664 957664 S 2025658 Pseudomonas sp. NS1(2017) 0.01 955120 955120 S 2726956 Pseudomonas sp. MSPm1 0.01 908700 908700 S 658644 Pseudomonas sp. R5-89-07 0.01 760385 760385 S 2479392 Pseudomonas sp. LTJR-52 0.01 746668 746668 S 1649877 Pseudomonas sp. CCOS 191 0.01 681417 681417 S 1702250 Pseudomonas sp. IB20 0.01 654888 654888 S 2590776 Pseudomonas sp. NIBRBAC000502773 0.01 636018 636018 S 1898684 Pseudomonas sp. LPH1 0.01 596252 596252 S 1855380 Pseudomonas sp. Z003-0.4C(8344-21) 0.01 574240 574240 S 1534110 Pseudomonas sp. DR 5-09 0.01 566393 566393 S 2662033 Pseudomonas sp. 14181154 0.01 531220 531220 S 118613 Pseudomonas sp. B10 0.01 517373 517373 S 2018067 Pseudomonas sp. FDAARGOS_380 0.01 467421 467421 S 1827300 Pseudomonas sp. MYb193 0.01 451253 451253 S 1758730 Pseudomonas sp. BIOMIG1BAC 0.00 429564 429564 S 2213057 Pseudomonas sp. R2A2 0.00 415248 415248 S 1611770 Pseudomonas sp. MRSN12121 0.00 406137 406137 S 2169583 Pseudomonas sp. SXM-1 0.00 400220 400220 S 2559074 Pseudomonas sp. S150 0.00 392611 392611 S 1259844 Pseudomonas sp. FGI182 0.00 389978 389978 S 2605424 Pseudomonas sp. J380 0.00 380349 380349 S 2005388 Pseudomonas sp. RU47 0.00 373422 373422 S 1573720 Pseudomonas sp. S49 0.00 346989 346989 S 2587845 Pseudomonas sp. THAF7b 0.00 336387 336387 S 2067572 Pseudomonas sp. NC02 0.00 327843 327843 S 2054915 Pseudomonas sp. 09C 129 0.00 327370 327370 S 658629 Pseudomonas sp. CMR12a 0.00 325455 325455 S 1500686 Pseudomonas sp. Os17 0.00 314587 314587 S 2597770 Pseudomonas sp. BJP69 0.00 312768 312768 S 2126069 Pseudomonas sp. LBUM920 0.00 311383 311383 S 1500687 Pseudomonas sp. St29 0.00 309880 309880 S 2730851 Pseudomonas sp. ADAK22 0.00 298520 298520 S 1886807 Pseudomonas sp. TMW 2.1634 0.00 297067 297067 S 1659194 Pseudomonas sp. GR 6-02 0.00 296673 296673 S 1636610 Pseudomonas sp. PONIH3 0.00 296421 296421 S 676210 Pseudomonas sp. ATCC 43928 0.00 292171 292171 S 2738843 Pseudomonas sp. B14-6 0.00 289732 289732 S 2069256 Pseudomonas sp. XWY-1 0.00 267013 267013 S 253237 Pseudomonas sp. phDV1 0.00 265185 265185 S 2083054 Pseudomonas sp. LG1D9 0.00 247745 247745 S 2083055 Pseudomonas sp. LH1G9 0.00 245196 245196 S 1173283 Pseudomonas sp. R3-18-08 0.00 233746 233746 S 2664899 Pseudomonas sp. CFSAN084952 0.00 230442 230442 S 1415630 Pseudomonas sp. TKP 0.00 220994 220994 S 2654238 Pseudomonas sp. DTU12.1 0.00 212842 212842 S 2083053 Pseudomonas sp. SWI44 0.00 209479 209479 S 2083052 Pseudomonas sp. SWI36 0.00 203173 203173 S 1855331 Pseudomonas sp. A214 0.00 183962 183962 S 306 Pseudomonas sp. 0.00 178543 178543 S 69328 Pseudomonas sp. VLB120 0.00 175416 175416 S 2681983 Pseudomonas sp. L22-9 0.00 168615 168615 S 2045200 Pseudomonas sp. s211(2017) 0.00 166938 166938 S 2762896 Pseudomonas sp. MPDS 0.00 165186 165186 S 1173273 Pseudomonas sp. R2-37-08W 0.00 163084 163084 S 658642 Pseudomonas sp. R4-34-07 0.00 156143 156143 S 1173288 Pseudomonas sp. R4-39-08 0.00 146466 146466 S 1173270 Pseudomonas sp. R1-43-08 0.00 145313 145313 S 1173284 Pseudomonas sp. R3-52-08 0.00 140905 140905 S 2662034 Pseudomonas sp. 13159349 0.00 126598 126598 S 658643 Pseudomonas sp. R4-35-07 0.00 120549 120549 S 1173280 Pseudomonas sp. R2-60-08W 0.00 119555 119555 S 2587597 Pseudomonas sp. SWI7 0.00 115425 115425 S 1338689 Pseudomonas sp. JY-Q 0.00 100087 100087 S 2609418 Pseudomonas sp. KUIN-1 0.00 99133 99133 S 658632 Pseudomonas sp. R11-23-07 0.00 96016 96016 S 2083051 Pseudomonas sp. SWI6 0.00 93408 93408 S 658641 Pseudomonas sp. R2-7-07 0.00 75739 75739 S 1495331 Pseudomonas sp. WCS374 0.00 68025 68025 S 2479393 Pseudomonas sp. LTGT-11-2Z 0.00 36480 36480 S 2545800 Pseudomonas sp. FDAARGOS_761 0.00 28393 28393 S 1761895 Pseudomonas sp. bs2935 0.00 21020 21020 S 76885 Pseudomonas sp. K-62 0.00 16772 16772 S 1329969 Pseudomonas sp. GLE121 0.00 13171 13171 S 1978467 Pseudomonas sp. AK6U 0.00 6241 6241 S 2578110 Pseudomonas sp. KBS0707 0.00 6200 6200 S 545908 Pseudomonas sp. LM8 0.00 2923 2923 S 341029 Pseudomonas sp. CT14 0.00 1698 1698 S 1523522 Pseudomonas sp. ZM1 0.00 1520 1520 S 115714 Pseudomonas sp. S-47 0.00 473 473 S 2730850 Pseudomonas sp. ADAK21 0.00 289 289 S 2730845 Pseudomonas sp. ADAK2 0.00 262 262 S 2578115 Pseudomonas sp. KBS0802 0.00 178 178 S 2759706 Pseudomonas sp. 29A 0.00 162 162 S 2730846 Pseudomonas sp. ADAK7 0.00 143 143 S 2730849 Pseudomonas sp. ADAK20 0.00 92 92 S 2743971 Pseudomonas sp. 43A 0.00 71 71 S 2587859 Pseudomonas sp. THAF42 0.00 48 48 S 1524461 Pseudomonas sp. EGD-AKN5 0.00 38 38 S 2587863 Pseudomonas sp. THAF187a 0.00 13 13 S 322535 Pseudomonas sp. S19 0.00 10 10 S 180590 Pseudomonas sp. SLT2001 0.00 9 9 S 1123041 Pseudomonas sp. MC1 0.64 57645655 2428595 G1 136843 Pseudomonas fluorescens group 0.25 22350886 15855785 S 294 Pseudomonas fluorescens 0.01 1329328 1329328 S1 1221522 Pseudomonas fluorescens NCIMB 11764 0.01 1235029 1235029 S1 1038922 Pseudomonas fluorescens Q2-87 0.01 1194670 1194670 S1 216595 Pseudomonas fluorescens SBW25 0.01 1099695 1099695 S1 746360 Pseudomonas fluorescens WH6 0.01 905938 905938 S1 743713 Pseudomonas fluorescens R124 0.01 563555 563555 S1 205922 Pseudomonas fluorescens Pf0-1 0.00 129975 129975 S1 1037911 Pseudomonas fluorescens A506 0.00 33720 33720 S1 1038923 Pseudomonas fluorescens Q8r1-96 0.00 3191 3191 S1 1114970 Pseudomonas fluorescens F113 0.05 4676519 3673336 S 47883 Pseudomonas synxantha 0.01 1003183 1003183 S1 96901 Pseudomonas synxantha BG33R 0.05 4433168 4003622 S 380021 Pseudomonas protegens 0.00 281843 281843 S1 1420599 Pseudomonas protegens Cab57 0.00 147476 147476 S1 1124983 Pseudomonas protegens CHA0 0.00 227 227 S1 220664 Pseudomonas protegens Pf-5 0.04 3602275 3602275 S 47878 Pseudomonas azotoformans 0.04 3535956 3535956 S 76758 Pseudomonas orientalis 0.02 1954000 1954000 S 200450 Pseudomonas trivialis 0.02 1499188 1499188 S 76760 Pseudomonas rhodesiae 0.02 1369489 1369489 S 183795 Pseudomonas mediterranea 0.01 1298962 1298962 S 46679 Pseudomonas mucidolens 0.01 1296259 1296259 S 47879 Pseudomonas corrugata 0.01 1282388 1282388 S 29442 Pseudomonas tolaasii 0.01 1250712 980785 S 200451 Pseudomonas poae 0.00 269927 269927 S1 1282356 Pseudomonas poae RE*1-1-14 0.01 1123307 1123307 S 651740 Pseudomonas cedrina 0.01 1024249 1024249 S 78543 Pseudomonas migulae 0.01 1022293 1022293 S 129817 Pseudomonas brenneri 0.01 958517 958517 S 75588 Pseudomonas libanensis 0.01 883874 883874 S 76761 Pseudomonas veronii 0.01 859557 859557 S 169669 Pseudomonas extremorientalis 0.01 795461 408340 S 75612 Pseudomonas mandelii 0.00 387121 387121 S1 1147786 Pseudomonas mandelii JR-1 0.36 32679510 1925887 G1 136845 Pseudomonas putida group 0.25 22458519 18469974 S 303 Pseudomonas putida 0.01 1218171 1218171 S1 390235 Pseudomonas putida W619 0.01 811578 811578 S1 1384061 Pseudomonas putida S13.1.2 0.01 491774 491774 S1 1211579 Pseudomonas putida NBRC 14164 0.00 212948 212948 S1 1081940 Pseudomonas putida B6-2 0.00 212705 212705 S1 1331671 Pseudomonas putida H8234 0.00 169982 169982 S1 1215088 Pseudomonas putida HB3267 0.00 159731 159731 S1 1196325 Pseudomonas putida DOT-T1E 0.00 118680 118680 S1 1042876 Pseudomonas putida S16 0.00 116322 116322 S1 76869 Pseudomonas putida GB-1 0.00 115272 115272 S1 1215087 Pseudomonas putida S12 0.00 92656 92656 S1 351746 Pseudomonas putida F1 0.00 81506 81506 S1 931281 Pseudomonas putida BIRD-1 0.00 78938 78938 S1 1150601 Pseudomonas putida JB 0.00 64227 64227 S1 231023 Pseudomonas putida ND6 0.00 43859 43859 S1 1193499 Pseudomonas putida SJTE-1 0.00 196 196 S1 160488 Pseudomonas putida KT2440 0.03 2400387 2400387 S 47885 Pseudomonas oryzihabitans 0.03 2295634 2286463 S 76759 Pseudomonas monteilii 0.00 8963 8963 S1 1435044 Pseudomonas monteilii SB3078 0.00 208 208 S1 1435058 Pseudomonas monteilii SB3101 0.02 1524394 271355 S 47880 Pseudomonas fulva 0.01 1253039 1253039 S1 743720 Pseudomonas fulva 12-X 0.01 1255580 1255580 S 70775 Pseudomonas plecoglossicida 0.01 478527 478527 S 2217867 Pseudomonas sp. SGAir0191 0.00 340582 340582 S 78327 Pseudomonas mosselii 0.28 24967440 226841 G1 136841 Pseudomonas aeruginosa group 0.12 10543550 10130118 S 287 Pseudomonas aeruginosa 0.00 172980 172980 S1 381754 Pseudomonas aeruginosa PA7 0.00 53842 53842 S1 1415629 Pseudomonas aeruginosa MTB-1 0.00 22282 22282 S1 1457392 Pseudomonas aeruginosa PA96 0.00 20346 20346 S1 1280938 Pseudomonas aeruginosa B136-33 0.00 19654 19654 S1 1400868 Pseudomonas aeruginosa VRFPA04 0.00 19452 19452 S1 1093787 Pseudomonas aeruginosa DK2 0.00 18533 18533 S1 1009714 Pseudomonas aeruginosa PAK 0.00 16795 16795 S1 1448140 Pseudomonas aeruginosa YL84 0.00 10679 10679 S1 910265 Pseudomonas aeruginosa C-NN2 0.00 10033 10033 S1 1427342 Pseudomonas aeruginosa SCV20265 0.00 9445 9445 S1 388272 Pseudomonas aeruginosa PACS2 0.00 8340 8340 S1 1352355 Pseudomonas aeruginosa c7447m 0.00 6142 6142 S1 941193 Pseudomonas aeruginosa M18 0.00 4004 4004 S1 1193501 Pseudomonas aeruginosa SJTD-1 0.00 3736 3736 S1 798130 Pseudomonas aeruginosa 39016 0.00 3151 3151 S1 1089456 Pseudomonas aeruginosa NCGM2.S1 0.00 3034 3034 S1 1340851 Pseudomonas aeruginosa RP73 0.00 1779 1779 S1 208963 Pseudomonas aeruginosa UCBPP-PA14 0.00 1462 992 S1 208964 Pseudomonas aeruginosa PAO1 0.00 420 420 S2 1147787 Pseudomonas aeruginosa PAO1H2O 0.00 30 30 S2 1367494 Pseudomonas aeruginosa PAO1-VE13 0.00 20 20 S2 1367493 Pseudomonas aeruginosa PAO1-VE2 0.00 996 996 S1 1411700 Pseudomonas aeruginosa DHS01 0.00 806 806 S1 1408276 Pseudomonas aeruginosa LESlike5 0.00 773 773 S1 1408271 Pseudomonas aeruginosa LES400 0.00 730 730 S1 1051003 Pseudomonas aeruginosa 19BR 0.00 667 667 S1 1408275 Pseudomonas aeruginosa LESlike4 0.00 640 640 S1 1408277 Pseudomonas aeruginosa LESlike7 0.00 634 634 S1 1408273 Pseudomonas aeruginosa LESB65 0.00 579 579 S1 1408272 Pseudomonas aeruginosa LES431 0.00 519 519 S1 1408274 Pseudomonas aeruginosa LESlike1 0.00 459 459 S1 1051004 Pseudomonas aeruginosa 213BR 0.00 331 331 S1 1279007 Pseudomonas aeruginosa PA1 0.00 278 278 S1 1279008 Pseudomonas aeruginosa PA1R 0.00 190 190 S1 557722 Pseudomonas aeruginosa LESB58 0.00 67 67 S1 1352354 Pseudomonas aeruginosa PAO581 0.00 58 58 S1 1123015 Pseudomonas aeruginosa DSM 50071 = NBRC 12689 0.00 16 16 S1 1356855 Pseudomonas aeruginosa DK1 0.05 4632809 3686578 S 300 Pseudomonas mendocina 0.00 322972 322972 S1 1225174 Pseudomonas mendocina S5.2 0.00 318154 318154 S1 399739 Pseudomonas mendocina ymp 0.00 305105 305105 S1 1001585 Pseudomonas mendocina NK-01 0.03 2605990 330832 G2 627141 Pseudomonas nitroreducens/multiresinivorans group 0.01 1231296 1231296 S 46680 Pseudomonas nitroreducens 0.01 1043862 1043862 S 95301 Pseudomonas multiresinivorans 0.02 2255282 431 G2 1232139 Pseudomonas oleovorans/pseudoalcaligenes group 0.02 1456395 1456395 S 1149133 Pseudomonas furukawaii 0.01 798456 796405 S 301 Pseudomonas oleovorans 0.00 2051 2051 S1 1182590 Pseudomonas pseudoalcaligenes CECT 5344 0.02 2231051 2231051 S 53408 Pseudomonas citronellolis 0.02 1415058 9 S 53412 Pseudomonas resinovorans 0.02 1415049 1415049 S1 1245471 Pseudomonas resinovorans NBRC 106553 0.01 1056859 1056859 S 43263 Pseudomonas alcaligenes 0.23 20797679 3809724 G1 136849 Pseudomonas syringae group 0.08 7352990 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.08 7352990 2454739 S 317 Pseudomonas syringae 0.01 1265840 1265840 S1 1357279 Pseudomonas syringae CC1557 0.01 1177682 430959 S1 321 Pseudomonas syringae pv. syringae 0.00 215671 215671 S2 1262350 Pseudomonas syringae pv. syringae SM 0.00 178665 178665 S2 1324932 Pseudomonas syringae pv. syringae HS191 0.00 166040 166040 S2 1260626 Pseudomonas syringae pv. syringae B64 0.00 98708 98708 S2 1324931 Pseudomonas syringae pv. syringae B301D 0.00 87639 87639 S2 205918 Pseudomonas syringae pv. syringae B728a 0.01 1173967 2319 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.01 1007621 952821 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 44445 44445 S3 1108972 Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 0.00 8991 8991 S3 1104678 Pseudomonas syringae pv. actinidiae ICMP 9853 0.00 1347 1347 S3 1194418 Pseudomonas syringae pv. actinidiae ICMP 9617 0.00 9 9 S3 1095103 Pseudomonas syringae pv. actinidiae ICMP 18884 0.00 8 8 S3 1104679 Pseudomonas syringae pv. actinidiae ICMP 18708 0.00 164027 164027 S2 264451 Pseudomonas syringae pv. cerasicola 0.00 248568 248568 S1 663959 Pseudomonas syringae pv. avii 0.00 244652 0 S1 59510 Pseudomonas syringae pv. pisi 0.00 244652 244652 S2 1357292 Pseudomonas syringae pv. pisi str. PP1 0.00 232156 232156 S1 199201 Pseudomonas syringae pv. lapsa 0.00 156621 156621 S1 192087 Pseudomonas syringae pv. atrofaciens 0.00 155673 155673 S1 1357289 Pseudomonas syringae USA011 0.00 151472 151472 S1 1332075 Pseudomonas syringae UMAF0158 0.00 91620 91620 S1 1357287 Pseudomonas syringae UB303 0.02 1770108 93653 S 251701 Pseudomonas syringae group genomosp. 3 0.02 1397724 11639 S1 59511 Pseudomonas syringae pv. maculicola 0.02 1382839 1382839 S2 629265 Pseudomonas syringae pv. maculicola str. ES4326 0.00 3246 3246 S2 698750 Pseudomonas syringae pv. maculicola str. M6 0.00 278731 273577 S1 323 Pseudomonas syringae pv. tomato 0.00 5154 5154 S2 223283 Pseudomonas syringae pv. tomato str. DC3000 0.02 1572188 0 S 36746 Pseudomonas cichorii 0.02 1572188 1572188 S1 1441629 Pseudomonas cichorii JBC1 0.02 1479039 1479039 S 33069 Pseudomonas viridiflava 0.02 1465479 1465479 S 1190415 Pseudomonas asturiensis 0.01 1317832 39 S 53409 Pseudomonas coronafaciens 0.01 1307723 0 S1 235277 Pseudomonas coronafaciens pv. oryzae 0.01 1307723 1307723 S2 563797 Pseudomonas coronafaciens pv. oryzae str. 1_6 0.00 10070 10070 S1 251653 Pseudomonas coronafaciens pv. garcae 0.01 1132935 22201 G2 251698 Pseudomonas syringae group genomosp. 2 0.01 912094 118788 S 47877 Pseudomonas amygdali 0.01 550793 203261 S1 53707 Pseudomonas amygdali pv. lachrymans 0.00 347532 347532 S2 629260 Pseudomonas amygdali pv. lachrymans str. M301315 0.00 224953 4064 S1 322 Pseudomonas amygdali pv. tabaci 0.00 220889 220889 S2 573066 Pseudomonas amygdali pv. tabaci str. ATCC 11528 0.00 17560 17560 S1 129138 Pseudomonas amygdali pv. morsprunorum 0.00 198640 3080 S 29438 Pseudomonas savastanoi 0.00 185895 5816 S1 360920 Pseudomonas savastanoi pv. savastanoi 0.00 180079 180079 S2 693985 Pseudomonas savastanoi pv. savastanoi NCPPB 3335 0.00 9665 0 S1 319 Pseudomonas savastanoi pv. phaseolicola 0.00 9665 9665 S2 264730 Pseudomonas savastanoi pv. phaseolicola 1448A 0.01 642487 642487 S 50340 Pseudomonas fuscovaginae 0.00 194929 194929 S 1206777 Pseudomonas sp. Lz4W 0.00 59968 59968 S 46257 Pseudomonas avellanae 0.18 16175908 19260 G1 136842 Pseudomonas chlororaphis group 0.14 12552531 8631360 S 587753 Pseudomonas chlororaphis 0.02 1834221 1834221 S1 86192 Pseudomonas chlororaphis subsp. aurantiaca 0.01 943248 943248 S1 1513890 Pseudomonas chlororaphis subsp. piscium 0.01 702319 488652 S1 587851 Pseudomonas chlororaphis subsp. aureofaciens 0.00 213667 213667 S2 1038921 Pseudomonas chlororaphis subsp. aureofaciens 30-84 0.00 323774 323774 S1 333 Pseudomonas chlororaphis subsp. chlororaphis 0.00 117609 117609 S1 1037915 Pseudomonas chlororaphis O6 0.01 1256068 1256068 S 47884 Pseudomonas taetrolens 0.01 1226891 1226891 S 86185 Pseudomonas lundensis 0.01 1121158 1121158 S 296 Pseudomonas fragi 0.17 15106136 148571 G1 136846 Pseudomonas stutzeri group 0.13 11778327 0 G2 578833 Pseudomonas stutzeri subgroup 0.13 11778327 9240623 S 316 Pseudomonas stutzeri 0.01 1037452 1037452 S1 1123519 Pseudomonas stutzeri DSM 10701 0.01 744027 744027 S1 644801 Pseudomonas stutzeri RCH2 0.00 446415 446415 S1 1196835 Pseudomonas stutzeri CCUG 29243 0.00 185261 185261 S1 379731 Pseudomonas stutzeri A1501 0.00 124549 124549 S1 996285 Pseudomonas stutzeri DSM 4166 0.01 1298182 1015259 S 74829 Pseudomonas balearica 0.00 282923 282923 S1 1123016 Pseudomonas balearica DSM 6083 0.01 1072442 1072442 S 271420 Pseudomonas xanthomarina 0.01 808614 808614 S 47886 Pseudomonas luteola 0.03 2895791 2895791 S 104087 Pseudomonas frederiksbergensis 0.03 2881396 1696386 S 312306 Pseudomonas entomophila 0.01 1185010 1185010 S1 384676 Pseudomonas entomophila L48 0.03 2729641 2729641 S 515393 Pseudomonas yamanorum 0.03 2556609 2461764 S 930166 Pseudomonas brassicacearum 0.00 94845 0 S1 86264 Pseudomonas brassicacearum subsp. brassicacearum 0.00 94845 94845 S2 994484 Pseudomonas brassicacearum subsp. brassicacearum NFM421 0.03 2380997 2380997 S 237610 Pseudomonas psychrotolerans 0.02 2073950 2073950 S 237609 Pseudomonas alkylphenolica 0.02 2049805 2049805 S 198618 Pseudomonas umsongensis 0.02 2017717 2017717 S 219572 Pseudomonas antarctica 0.02 1999512 1999512 S 319939 Pseudomonas otitidis 0.02 1958949 1958949 S 198620 Pseudomonas koreensis 0.02 1893460 1427431 S 65741 Pseudomonas knackmussii 0.01 466029 466029 S1 1301098 Pseudomonas knackmussii B13 0.02 1809955 1809955 S 157782 Pseudomonas parafulva 0.02 1716998 1013503 S 321662 Pseudomonas moraviensis 0.01 703495 703495 S1 1395516 Pseudomonas moraviensis R28-S 0.02 1475887 1475887 S 158627 Pseudomonas graminis 0.02 1414810 1414810 S 46677 Pseudomonas agarici 0.02 1372270 1372270 S 95300 Pseudomonas vancouverensis 0.02 1370813 0 G1 136844 Pseudomonas pertucinogena group 0.02 1370813 1370813 S 43306 Pseudomonas denitrificans (nom. rej.) 0.02 1354576 1354576 S 437900 Pseudomonas marincola 0.01 1342314 1342314 S 553151 Pseudomonas pelagia 0.01 1301484 1301484 S 122355 Pseudomonas psychrophila 0.01 1288249 1288249 S 395598 Pseudomonas reinekei 0.01 1263822 1263822 S 244566 Pseudomonas lurida 0.01 1252430 1252430 S 321846 Pseudomonas simiae 0.01 1241866 1241866 S 702115 Pseudomonas arsenicoxydans 0.01 1233652 1233652 S 1148509 Pseudomonas prosekii 0.01 1225402 1225402 S 216142 Pseudomonas rhizosphaerae 0.01 1220482 1220482 S 1853130 Pseudomonas silesiensis 0.01 1201949 1201949 S 472181 Pseudomonas sabulinigri 0.01 1199294 1199294 S 191390 Pseudomonas palleroniana 0.01 1191850 1191850 S 359110 Pseudomonas extremaustralis 0.01 1188735 1188735 S 163011 Pseudomonas lini 0.01 1169065 1169065 S 157783 Pseudomonas cremoricolorata 0.01 1161401 1161401 S 1788301 Pseudomonas versuta 0.01 1142964 1142964 S 1434072 Pseudomonas salegens 0.01 1141309 1141309 S 797277 Pseudomonas litoralis 0.01 1090495 1090495 S 1392877 Pseudomonas oryzae 0.01 1075946 1075946 S 364197 Pseudomonas pohangensis 0.01 1052818 1052818 S 487184 Pseudomonas xinjiangensis 0.01 1014907 1014907 S 86265 Pseudomonas thivervalensis 0.01 975045 975045 S 1499686 Pseudomonas saudiphocaensis 0.01 967828 967828 S 1628086 Pseudomonas kribbensis 0.01 792358 792358 S 1691904 Pseudomonas sediminis 0.01 717799 717799 S 1245526 Pseudomonas guangdongensis 0.01 614000 614000 S 53407 Pseudomonas asplenii 0.01 569708 569708 S 1302376 Candidatus Pseudomonas adelgestsugas 0.01 560980 560980 S 1421430 Pseudomonas granadensis 0.01 502957 502957 S 1615674 Pseudomonas lactis 0.01 499883 0 S 101564 Pseudomonas alcaliphila 0.01 499883 499883 S1 741155 Pseudomonas alcaliphila JAB1 0.01 491492 491492 S 1274359 Pseudomonas sihuiensis 0.00 294634 294634 S 1306993 Pseudomonas soli 0.00 277574 277574 S 1583341 Pseudomonas cerasi 0.05 4278666 0 F1 351 Azotobacter group 0.05 4278666 344120 G 352 Azotobacter 0.02 1611056 1056895 S 353 Azotobacter chroococcum 0.01 554161 554161 S1 1328314 Azotobacter chroococcum NCIMB 8003 0.01 1248163 1247964 S 354 Azotobacter vinelandii 0.00 127 127 S1 322710 Azotobacter vinelandii DJ 0.00 42 42 S1 1283330 Azotobacter vinelandii CA 0.00 30 30 S1 1283331 Azotobacter vinelandii CA6 0.01 1075327 1075327 S 69964 Azotobacter salinestris 0.01 1326647 0 G 1849530 Oblitimonas 0.01 1326647 1326647 S 1697053 Oblitimonas alkaliphila 0.01 1316162 0 G 1649479 Permianibacter 0.01 1316162 1316162 S 1510150 Permianibacter aggregans 0.01 546670 0 F1 190017 unclassified Pseudomonadaceae 0.01 546670 546670 S 2079806 Pseudomonadaceae bacterium SI-3 0.01 533334 0 G 2758906 Entomomonas 0.01 533334 533334 S 2213226 Entomomonas moraniae 0.94 84449950 83841 F 468 Moraxellaceae 0.73 65521173 9832437 G 469 Acinetobacter 0.17 15311226 622180 G1 196816 unclassified Acinetobacter 0.01 1183547 1183547 S 2714110 Acinetobacter sp. Marseille-Q1620 0.01 1039988 1039988 S 1879049 Acinetobacter sp. WCHAc010034 0.01 1032700 1032700 S 1407071 Acinetobacter sp. TGL-Y2 0.01 1013800 1013800 S 1758189 Acinetobacter sp. ACNIH2 0.01 998509 998509 S 2715164 Acinetobacter sp. 323-1 0.01 926861 926861 S 2715163 Acinetobacter sp. 185 0.01 826083 826083 S 1808001 Acinetobacter sp. LoGeW2-3 0.01 806336 806336 S 2563897 Acinetobacter sp. 10FS3-1 0.01 789254 789254 S 1646498 Acinetobacter sp. TTH0-4 0.01 781472 781472 S 1608473 Acinetobacter sp. NCu2D-2 0.01 743882 743882 S 2662362 Acinetobacter sp. dk386 0.01 724012 724012 S 1827285 Acinetobacter sp. MYb10 0.01 677927 677927 S 2004644 Acinetobacter sp. WCHA45 0.01 645279 645279 S 2004646 Acinetobacter sp. WCHA55 0.01 540909 540909 S 2609668 Acinetobacter sp. C16S1 0.01 477320 477320 S 2004647 Acinetobacter sp. WCHAc010052 0.00 310280 310280 S 1636603 Acinetobacter sp. ACNIH1 0.00 307154 307154 S 2743575 Acinetobacter sp. NEB 394 0.00 297773 297773 S 2545797 Acinetobacter sp. FDAARGOS_724 0.00 254422 254422 S 2079596 Acinetobacter sp. SWBY1 0.00 176454 176454 S 2725684 Acinetobacter sp. NEB149 0.00 107315 107315 S 2675741 Acinetobacter sp. BEC1-S18-ESBL-01 0.00 20316 20316 S 2420300 Acinetobacter sp. FDAARGOS_493 0.00 5134 5134 S 1280052 Acinetobacter sp. M131 0.00 1559 1559 S 2420305 Acinetobacter sp. FDAARGOS_560 0.00 485 485 S 2420301 Acinetobacter sp. FDAARGOS_494 0.00 141 141 S 61312 Acinetobacter sp. SUN 0.00 129 129 S 156739 Acinetobacter sp. EB104 0.00 5 5 S 309867 Acinetobacter sp. LUH5605 0.14 12916538 1722308 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.05 4884955 4779272 S 470 Acinetobacter baumannii 0.00 47349 47349 S1 1400867 Acinetobacter baumannii ZW85-1 0.00 10336 10336 S1 1401639 Acinetobacter baumannii NCGM 237 0.00 8954 8954 S1 557600 Acinetobacter baumannii AB307-0294 0.00 7123 7123 S1 1370126 Acinetobacter baumannii DU202 0.00 5995 5995 S1 509173 Acinetobacter baumannii AYE 0.00 5907 5907 S1 400667 Acinetobacter baumannii ATCC 17978 0.00 5041 5041 S1 405416 Acinetobacter baumannii ACICU 0.00 5034 5034 S1 945556 Acinetobacter baumannii D1279779 0.00 2278 2278 S1 1096997 Acinetobacter baumannii BJAB0868 0.00 2091 2091 S1 1100841 Acinetobacter baumannii TYTH-1 0.00 1670 1670 S1 696749 Acinetobacter baumannii 1656-2 0.00 1522 1522 S1 1096996 Acinetobacter baumannii BJAB0715 0.00 832 832 S1 1096995 Acinetobacter baumannii BJAB07104 0.00 435 435 S1 889738 Acinetobacter baumannii MDR-TJ 0.00 405 405 S1 497978 Acinetobacter baumannii MDR-ZJ06 0.00 282 282 S1 480119 Acinetobacter baumannii AB0057 0.00 251 251 S1 1455315 Acinetobacter baumannii LAC-4 0.00 178 178 S1 1413216 Acinetobacter baumannii PKAB07 0.03 2308423 2177062 S 48296 Acinetobacter pittii 0.00 131361 131361 S1 871585 Acinetobacter pittii PHEA-2 0.02 1749105 1641215 S 106654 Acinetobacter nosocomialis 0.00 107890 107890 S1 1343071 Acinetobacter nosocomialis M2 0.02 1443720 1443720 S 471 Acinetobacter calcoaceticus 0.01 805621 805621 S 1785128 Acinetobacter lactucae 0.00 2406 2406 S 1530123 Acinetobacter seifertii 0.03 2578910 2578910 S 756892 Acinetobacter indicus 0.02 1970629 1970629 S 29430 Acinetobacter haemolyticus 0.02 1874220 1874220 S 108981 Acinetobacter schindleri 0.02 1589140 1589140 S 1879050 Acinetobacter wuhouensis 0.02 1567621 1442463 S 40216 Acinetobacter radioresistens 0.00 125158 125158 S1 981334 Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 0.01 1321992 1217311 S 40214 Acinetobacter johnsonii 0.00 104681 104681 S1 1242245 Acinetobacter johnsonii XBB1 0.01 1306844 1306844 S 40215 Acinetobacter junii 0.01 1258488 1258488 S 106648 Acinetobacter bereziniae 0.01 1111467 1111467 S 1789224 Acinetobacter larvae 0.01 1067308 996347 S 28090 Acinetobacter lwoffii 0.00 70961 70961 S1 1046625 Acinetobacter lwoffii WJ10621 0.01 1036339 1036339 S 134534 Acinetobacter gyllenbergii 0.01 1021425 1021425 S 70348 Acinetobacter dispersus 0.01 1002835 1002835 S 487316 Acinetobacter soli 0.01 1001147 0 S 202950 Acinetobacter baylyi 0.01 1001147 1001147 S1 62977 Acinetobacter baylyi ADP1 0.01 966239 966239 S 202954 Acinetobacter tandoii 0.01 945315 945315 S 1871111 Acinetobacter defluvii 0.01 940485 940485 S 108980 Acinetobacter ursingii 0.01 936375 936375 S 2136182 Acinetobacter cumulans 0.01 859896 1777 S 52133 Acinetobacter venetianus 0.01 858119 858119 S1 1197884 Acinetobacter venetianus VE-C3 0.01 833292 833292 S 1324350 Acinetobacter equi 0.01 731164 731164 S 106649 Acinetobacter guillouiae 0.01 610271 0 S 1148157 Acinetobacter oleivorans 0.01 610271 610271 S1 436717 Acinetobacter oleivorans DR1 0.01 495243 495243 S 2004650 Acinetobacter chinensis 0.00 434327 434327 S 202956 Acinetobacter towneri 0.12 10756521 1646574 G 497 Psychrobacter 0.08 7169951 1877409 G1 196806 unclassified Psychrobacter 0.01 991657 991657 S 1699621 Psychrobacter sp. P11F6 0.01 946040 946040 S 1028416 Psychrobacter sp. DAB_AL43B 0.01 930850 930850 S 1699623 Psychrobacter sp. P11G3 0.00 402767 402767 S 571800 Psychrobacter sp. G 0.00 386090 386090 S 1699624 Psychrobacter sp. P11G5 0.00 370110 370110 S 1720344 Psychrobacter sp. AntiMn-1 0.00 363674 363674 S 1699622 Psychrobacter sp. P2G3 0.00 352695 352695 S 2733866 Psychrobacter sp. KCTC 72983 0.00 262826 262826 S 349106 Psychrobacter sp. PRwf-1 0.00 252033 252033 S 2203895 Psychrobacter sp. YP14 0.00 17354 17354 S 1028414 Psychrobacter sp. DAB_AL32B 0.00 9160 9160 S 1028420 Psychrobacter sp. DAB_AL62B 0.00 5860 5860 S 1028419 Psychrobacter sp. DAB_AL60 0.00 1406 1406 S 1028409 Psychrobacter sp. DAB_AL109bw 0.00 20 20 S 2565557 Psychrobacter sp. PAMC27889 0.01 867313 867313 S 45610 Psychrobacter urativorans 0.01 669634 0 S 334543 Psychrobacter arcticus 0.01 669634 669634 S1 259536 Psychrobacter arcticus 273-4 0.00 398565 398548 S 330922 Psychrobacter cryohalolentis 0.00 17 17 S1 335284 Psychrobacter cryohalolentis K5 0.00 2774 2774 S 261164 Psychrobacter alimentarius 0.00 1710 1710 S 256325 Psychrobacter maritimus 0.08 6923743 495854 G 475 Moraxella 0.03 2914147 2914147 S 34062 Moraxella osloensis 0.01 956307 946020 S 480 Moraxella catarrhalis 0.00 10287 10287 S1 1236608 Moraxella catarrhalis BBH18 0.01 868640 868640 S 386891 Moraxella bovoculi 0.01 794217 794097 S 476 Moraxella bovis 0.00 120 120 S1 387425 Moraxella bovis Epp63 0.01 648447 648447 S 34061 Moraxella cuniculi 0.00 245112 245112 S 29433 Moraxella ovis 0.00 1019 0 G1 2685852 unclassified Moraxella 0.00 1019 1019 S 77152 Moraxella sp. TA144 0.01 1164672 0 F1 54393 unclassified Moraxellaceae 0.01 1164672 1164672 S 2283318 Moraxellaceae bacterium HYN0046 2.16 195159540 312406 O 135622 Alteromonadales 0.69 62698422 82863 F 72275 Alteromonadaceae 0.23 21026388 2839912 G 226 Alteromonas 0.06 5219405 3534615 S 28108 Alteromonas macleodii 0.01 953800 953800 S1 1004785 Alteromonas macleodii str. 'Black Sea 11' 0.00 383574 383574 S1 1004787 Alteromonas macleodii str. 'Balearic Sea AD45' 0.00 175208 175208 S1 1004788 Alteromonas macleodii str. 'English Channel 673' 0.00 172208 172208 S1 529120 Alteromonas macleodii ATCC 27126 0.06 5006550 954450 G1 2614992 unclassified Alteromonas 0.02 1554723 1554723 S 2267264 Alteromonas sp. RKMC-009 0.01 1084611 1084611 S 1714845 Alteromonas sp. BL110 0.01 830881 830881 S 2358187 Alteromonas sp. 76-1 0.00 285621 285621 S 2058133 Alteromonas sp. MB-3u-76 0.00 240108 240108 S 1917158 Alteromonas sp. RW2A1 0.00 56156 56156 S 1777491 Alteromonas sp. Mac1 0.04 3718541 3137307 S 314275 Alteromonas mediterranea 0.00 179157 179157 S1 1300253 Alteromonas mediterranea 615 0.00 143898 143898 S1 1774373 Alteromonas mediterranea DE 0.00 142662 142662 S1 1300254 Alteromonas mediterranea MED64 0.00 108853 108853 S1 1300256 Alteromonas mediterranea U7 0.00 3187 3187 S1 1004786 Alteromonas mediterranea DE1 0.00 2347 2347 S1 1300259 Alteromonas mediterranea UM4b 0.00 1130 1130 S1 1300258 Alteromonas mediterranea UM7 0.02 1605978 1605978 S 589873 Alteromonas australica 0.01 1330857 1330857 S 1858656 Alteromonas pelagimontana 0.01 777939 777939 S 715451 Alteromonas naphthalenivorans 0.00 382713 382099 S 233316 Alteromonas stellipolaris 0.00 614 614 S1 1160720 Alteromonas stellipolaris LMG 21856 0.00 144493 144493 S 287094 Alteromonas addita 0.22 20208840 1614815 G 2742 Marinobacter 0.10 9285244 1403134 G1 83889 unclassified Marinobacter 0.02 1369791 1369791 S 2488665 Marinobacter sp. NP-4(2019) 0.01 1347009 1347009 S 1415568 Marinobacter sp. LV10R510-11A 0.01 1237591 1237591 S 2304594 Marinobacter sp. Arc7-DN-1 0.01 1120746 1120746 S 2547598 Marinobacter sp. JH2 0.01 812457 812457 S 1749259 Marinobacter sp. LQ44 0.01 700069 700069 S 490759 Marinobacter sp. BSs20148 0.01 662492 662492 S 1671721 Marinobacter sp. CP1 0.01 628951 628951 S 1761794 Marinobacter sp. es.042 0.00 2917 2917 S 2587869 Marinobacter sp. THAF197a 0.00 87 87 S 2587857 Marinobacter sp. THAF39 0.03 2280245 2280245 S 1420917 Marinobacter salarius 0.02 1868393 613048 S 2743 Marinobacter hydrocarbonoclasticus 0.01 691991 691991 S1 351348 Marinobacter hydrocarbonoclasticus VT8 0.01 563354 563354 S1 1163748 Marinobacter hydrocarbonoclasticus ATCC 49840 0.02 1407557 1407557 S 2603215 Marinobacter fonticola 0.01 1246563 1246563 S 1874317 Marinobacter salinus 0.01 1191925 1191925 S 1420916 Marinobacter similis 0.01 679708 679708 S 330734 Marinobacter psychrophilus 0.01 634390 0 S 1033846 Marinobacter adhaerens 0.01 634390 634390 S1 225937 Marinobacter adhaerens HP15 0.07 6402781 10300 G 1621534 Paraglaciecola 0.04 3176426 673 G1 2685791 unclassified Paraglaciecola 0.02 1635474 1635474 S 2686358 Paraglaciecola sp. L3A3 0.02 1540279 1540279 S 2686359 Paraglaciecola sp. L1A13 0.02 1676927 0 S 326544 Paraglaciecola psychrophila 0.02 1676927 1676927 S1 1129794 Paraglaciecola psychrophila 170 0.02 1539128 1539128 S 197222 Paraglaciecola mesophila 0.04 3892909 15827 G 288793 Salinimonas 0.01 1345365 1345365 S 2303538 Salinimonas sediminis 0.01 1267833 1267833 S 914153 Salinimonas lutimaris 0.01 1263884 0 G1 2645119 unclassified Salinimonas 0.01 1263884 1263884 S 2572577 Salinimonas sp. KX18D6 0.04 3271413 1747 G 1172191 Catenovulum 0.02 1790416 0 G1 2638362 unclassified Catenovulum 0.02 1790416 1790416 S 2172099 Catenovulum sp. CCB-QB4 0.02 1479250 1479250 S 1740262 Catenovulum sediminis 0.03 2734578 1 G 89404 Glaciecola 0.02 1438138 0 G1 2618684 unclassified Glaciecola 0.02 1438138 1438138 S 2489595 Glaciecola sp. THG-3.7 0.01 1296439 0 S 300231 Glaciecola nitratireducens 0.01 1296439 1296439 S1 1085623 Glaciecola nitratireducens FR1064 0.02 1383222 0 G 1751872 Lacimicrobium 0.02 1383222 1383222 S 1526571 Lacimicrobium alkaliphilum 0.02 1357796 0 G 261825 Agarivorans 0.02 1357796 1357796 S 680279 Agarivorans gilvus 0.01 1325991 0 G 2650549 Hydrocarboniclastica 0.01 1325991 1325991 S 2259620 Hydrocarboniclastica marina 0.01 1011641 0 G 2661818 Saliniradius 0.01 1011641 1011641 S 2183582 Saliniradius amylolyticus 0.66 59950064 17465 F 267890 Shewanellaceae 0.63 57191395 7023744 G 22 Shewanella 0.13 11960851 474442 G1 196818 unclassified Shewanella 0.02 1622203 1622203 S 2593655 Shewanella sp. YLB-06 0.02 1580944 1580944 S 2589987 Shewanella sp. Scap07 0.02 1378275 1378275 S 2487742 Shewanella sp. M2 0.01 1197663 1197663 S 2590015 Shewanella sp. SNU WT4 0.01 1047732 1047732 S 2029986 Shewanella sp. WE21 0.01 990580 990580 S 2698686 Shewanella sp. Arc9-LZ 0.01 977786 977786 S 1930557 Shewanella sp. FDAARGOS_354 0.01 702823 702823 S 94122 Shewanella sp. ANA-3 0.01 584103 584103 S 2059264 Shewanella sp. Pdp11 0.01 470814 470814 S 2575361 Shewanella sp. MEBiC00475 0.00 424695 424695 S 60481 Shewanella sp. MR-7 0.00 364154 364154 S 60480 Shewanella sp. MR-4 0.00 142109 142109 S 351745 Shewanella sp. W3-18-1 0.00 2528 2528 S 592146 Shewanella sp. 33B 0.04 3807253 3123290 S 62322 Shewanella baltica 0.00 274850 274850 S1 407976 Shewanella baltica OS223 0.00 234079 234079 S1 402882 Shewanella baltica OS185 0.00 63531 63531 S1 693970 Shewanella baltica OS117 0.00 48937 48937 S1 399599 Shewanella baltica OS195 0.00 27329 27329 S1 693974 Shewanella baltica BA175 0.00 16080 16080 S1 693973 Shewanella baltica OS678 0.00 12374 12374 S1 693971 Shewanella baltica OS183 0.00 6783 6783 S1 325240 Shewanella baltica OS155 0.02 2201379 2201379 S 38313 Shewanella algae 0.02 1805961 0 S 60961 Shewanella woodyi 0.02 1805961 1805961 S1 392500 Shewanella woodyi ATCC 51908 0.02 1718557 1718557 S 225848 Shewanella psychrophila 0.02 1698482 1698482 S 260364 Shewanella marisflavi 0.02 1677794 0 S 271097 Shewanella sediminis 0.02 1677794 1677794 S1 425104 Shewanella sediminis HAW-EB3 0.02 1630638 0 S 404011 Shewanella piezotolerans 0.02 1630638 1630638 S1 225849 Shewanella piezotolerans WP3 0.02 1537867 0 S 271098 Shewanella halifaxensis 0.02 1537867 1537867 S1 458817 Shewanella halifaxensis HAW-EB4 0.02 1505448 1505448 S 93973 Shewanella japonica 0.02 1500190 0 S 70864 Shewanella pealeana 0.02 1500190 1500190 S1 398579 Shewanella pealeana ATCC 700345 0.02 1486709 1486709 S 238836 Shewanella donghaensis 0.02 1446347 1446347 S 1965282 Shewanella khirikhana 0.02 1445529 1445529 S 2520507 Shewanella maritima 0.02 1372417 0 S 60217 Shewanella violacea 0.02 1372417 1372417 S1 637905 Shewanella violacea DSS12 0.02 1362138 0 S 192073 Shewanella denitrificans 0.02 1362138 1362138 S1 318161 Shewanella denitrificans OS217 0.01 1341710 0 S 359303 Shewanella loihica 0.01 1341710 1341710 S1 323850 Shewanella loihica PV-4 0.01 1340295 1340295 S 1028752 Shewanella aestuarii 0.01 1283674 0 S 60478 Shewanella amazonensis 0.01 1283674 1283674 S1 326297 Shewanella amazonensis SB2B 0.01 1239987 0 S 70863 Shewanella oneidensis 0.01 1239987 1239987 S1 211586 Shewanella oneidensis MR-1 0.01 1237252 1237252 S 150120 Shewanella livingstonensis 0.01 1099561 878402 S 24 Shewanella putrefaciens 0.00 221150 221150 S1 399804 Shewanella putrefaciens 200 0.00 9 9 S1 319224 Shewanella putrefaciens CN-32 0.01 1046595 1046595 S 43661 Shewanella benthica 0.01 950566 0 S 56812 Shewanella frigidimarina 0.01 950566 950566 S1 318167 Shewanella frigidimarina NCIMB 400 0.01 833494 833494 S 256839 Shewanella decolorationis 0.01 750856 750856 S 558541 Shewanella chilikensis 0.01 451515 451515 S 2588449 Shewanella polaris 0.00 388231 388231 S 2018305 Shewanella bicestrii 0.00 46355 46355 S 332186 Shewanella xiamenensis 0.03 2741204 1383 G 2547964 Parashewanella 0.02 1450492 1450492 S 342950 Parashewanella spongiae 0.01 1289329 1289329 S 2547970 Parashewanella tropica 0.47 42480639 0 F 267888 Pseudoalteromonadaceae 0.47 42480639 7949813 G 53246 Pseudoalteromonas 0.11 9968546 1856689 G1 194690 unclassified Pseudoalteromonas 0.02 1745550 1745550 S 1709477 Pseudoalteromonas sp. R3 0.02 1434408 1434408 S 116092 Pseudoalteromonas sp. A25 0.01 940584 940584 S 1514074 Pseudoalteromonas sp. NC201 0.01 742480 742480 S 2583375 Pseudoalteromonas sp. 16-SW-7 0.01 705581 705581 S 1390185 Pseudoalteromonas sp. DL-6 0.01 483109 483109 S 1761891 Pseudoalteromonas sp. 13-15 0.01 457976 457976 S 2587843 Pseudoalteromonas sp. THAF3 0.00 392377 392377 S 1720343 Pseudoalteromonas sp. 1_2015MBL_MicDiv 0.00 376589 376589 S 283699 Pseudoalteromonas sp. Bsw20308 0.00 327696 327696 S 2490635 Pseudoalteromonas sp. Xi13 0.00 167605 167605 S 2759705 Pseudoalteromonas sp. MT33b 0.00 152202 152202 S 2752475 Pseudoalteromonas sp. JSTW 0.00 149881 149881 S 234831 Pseudoalteromonas sp. SM9913 0.00 31540 31540 S 747457 Pseudoalteromonas sp. SANK 73390 0.00 1773 1773 S 383749 Pseudoalteromonas sp. BSi20327 0.00 1273 1273 S 336179 Pseudoalteromonas sp. 643A 0.00 972 972 S 87791 Pseudoalteromonas sp. PS1M3 0.00 156 156 S 2589991 Pseudoalteromonas sp. Scap06 0.00 105 105 S 2589992 Pseudoalteromonas sp. Scap25 0.04 3734729 3734729 S 43657 Pseudoalteromonas luteoviolacea 0.03 2424252 2424252 S 43662 Pseudoalteromonas piscicida 0.02 2230140 1478070 S 298657 Pseudoalteromonas spongiae 0.01 752070 752070 S1 1117319 Pseudoalteromonas spongiae UST010723-006 0.02 1777185 191494 S 288 Pseudoalteromonas atlantica 0.02 1585691 1585691 S1 342610 Pseudoalteromonas atlantica T6c 0.02 1764275 1764275 S 43658 Pseudoalteromonas rubra 0.02 1494174 1494174 S 314281 Pseudoalteromonas tunicata 0.02 1483289 1483289 S 161398 Pseudoalteromonas phenolica 0.02 1374099 1374099 S 1348114 Pseudoalteromonas piratica 0.01 1083933 1083933 S 247523 Pseudoalteromonas aliena 0.01 1064278 0 S 28107 Pseudoalteromonas espejiana 0.01 1064278 1064278 S1 1314869 Pseudoalteromonas espejiana DSM 9414 0.01 1052455 1047650 S 227 Pseudoalteromonas carrageenovora 0.00 4805 4805 S1 1314868 Pseudoalteromonas carrageenovora IAM 12662 0.01 1036159 1036159 S 1190813 Pseudoalteromonas shioyasakiensis 0.01 892475 251456 S 166935 Pseudoalteromonas translucida 0.01 641019 641019 S1 1315283 Pseudoalteromonas translucida KMM 520 0.01 833047 0 S 394751 Pseudoalteromonas arctica 0.01 833047 833047 S1 1117313 Pseudoalteromonas arctica A 37-1-2 0.01 646514 378863 S 176102 Pseudoalteromonas agarivorans 0.00 267651 267651 S1 1312369 Pseudoalteromonas agarivorans DSM 14585 0.01 474854 474854 S 151081 Pseudoalteromonas ruthenica 0.00 322535 322535 S 267375 Pseudoalteromonas marina 0.00 258169 258169 S 28109 Pseudoalteromonas nigrifaciens 0.00 232261 232261 S 621376 Pseudoalteromonas donghaensis 0.00 216701 216701 S 152297 Pseudoalteromonas issachenkonii 0.00 166756 166756 S 43659 Pseudoalteromonas tetraodonis 0.18 15938671 17295 F 267889 Colwelliaceae 0.12 11009799 278823 G 28228 Colwellia 0.09 7944370 47578 G1 196834 unclassified Colwellia 0.02 1396802 1396802 S 2497879 Colwellia sp. Arc7-635 0.02 1392516 1392516 S 1816218 Colwellia sp. PAMC 20917 0.01 1352240 1352240 S 2689569 Colwellia sp. 20A7 0.01 1285962 1285962 S 58049 Colwellia sp. MT41 0.01 1242692 1242692 S 1816219 Colwellia sp. PAMC 21821 0.01 1226580 1226580 S 2161872 Colwellia sp. Arc7-D 0.02 1618508 0 S 28229 Colwellia psychrerythraea 0.02 1618508 1618508 S1 167879 Colwellia psychrerythraea 34H 0.01 1168098 1168098 S 1967665 Colwellia beringensis 0.04 3619570 2681 G 1518149 Thalassotalea 0.03 2429105 1025 G1 2614972 unclassified Thalassotalea 0.01 1252204 1252204 S 2552945 Thalassotalea sp. HSM 43 0.01 1175876 1175876 S 2594005 Thalassotalea sp. PS06 0.01 1187784 1187784 S 1763536 Thalassotalea crassostreae 0.01 1292007 0 G 1407056 Litorilituus 0.01 1292007 1292007 S 718192 Litorilituus sediminis 0.05 4710072 531 F 267893 Idiomarinaceae 0.04 3866894 282642 G 135575 Idiomarina 0.02 1426837 4097 G1 2614829 unclassified Idiomarina 0.01 877741 877741 S 2100422 Idiomarina sp. OT37-5b 0.01 544999 544999 S 2055892 Idiomarina sp. X4 0.01 866708 866621 S 135577 Idiomarina loihiensis 0.00 87 87 S1 1321370 Idiomarina loihiensis GSL 199 0.01 754364 754364 S 1940690 Idiomarina andamanensis 0.01 536343 536343 S 1096243 Idiomarina piscisalsi 0.01 842647 0 F1 946227 unclassified Idiomarinaceae 0.01 842647 842647 S 1298881 Idiomarinaceae bacterium HL-53 0.05 4211246 0 F 267891 Moritellaceae 0.05 4211246 110992 G 58050 Moritella 0.02 1460430 1460430 S 80854 Moritella viscosa 0.02 1389893 0 S 90736 Moritella marina 0.02 1389893 1389893 S1 1202962 Moritella marina ATCC 15381 0.01 1249931 1249931 S 69539 Moritella yayanosii 0.03 2599601 0 F 267892 Ferrimonadaceae 0.03 2599601 836 G 44011 Ferrimonas 0.01 1321884 0 S 44012 Ferrimonas balearica 0.01 1321884 1321884 S1 550540 Ferrimonas balearica DSM 9799 0.01 1276881 0 G1 2620587 unclassified Ferrimonas 0.01 1276881 1276881 S 2724191 Ferrimonas sp. S7 0.03 2258419 0 F 267894 Psychromonadaceae 0.03 2258419 1536 G 67572 Psychromonas 0.02 1354105 0 S 357794 Psychromonas ingrahamii 0.02 1354105 1354105 S1 357804 Psychromonas ingrahamii 37 0.01 902778 0 G1 2614957 unclassified Psychromonas 0.01 902778 902778 S 314282 Psychromonas sp. CNPT3 1.49 134824658 0 O 135623 Vibrionales 1.49 134824658 317666 F 641 Vibrionaceae 1.30 117234483 13063677 G 662 Vibrio 0.32 28723056 3043170 G1 717610 Vibrio harveyi group 0.07 6756427 6452432 S 670 Vibrio parahaemolyticus 0.00 94386 0 S1 1338033 Vibrio parahaemolyticus O1:Kuk 0.00 94386 94386 S2 1338034 Vibrio parahaemolyticus O1:Kuk str. FDA_R31 0.00 78476 78476 S1 1429044 Vibrio parahaemolyticus UCM-V493 0.00 71084 71084 S1 1211705 Vibrio parahaemolyticus BB22OP 0.00 59456 0 S1 1338031 Vibrio parahaemolyticus O1:K33 0.00 59456 59456 S2 1338032 Vibrio parahaemolyticus O1:K33 str. CDC_K4557 0.00 399 399 S1 223926 Vibrio parahaemolyticus RIMD 2210633 0.00 99 99 S1 1300351 Vibrio parahaemolyticus v110 0.00 95 95 S1 745023 Vibrio parahaemolyticus 10329 0.04 3988144 3401797 S 680 Vibrio campbellii 0.00 327364 327364 S1 338187 Vibrio campbellii ATCC BAA-1116 0.00 258983 258983 S1 1224742 Vibrio campbellii CAIM 519 = NBRC 15631 0.03 2898665 2896744 S 663 Vibrio alginolyticus 0.00 1921 1921 S1 1219076 Vibrio alginolyticus NBRC 15630 = ATCC 17749 0.03 2768012 2768012 S 696485 Vibrio owensii 0.03 2383022 2383022 S 669 Vibrio harveyi 0.02 1824174 704830 G2 2315253 Vibrio diabolicus subgroup 0.01 962003 962003 S 50719 Vibrio diabolicus 0.00 157341 157341 S 150340 Vibrio antiquarius 0.02 1622622 1622622 S 190895 Vibrio rotiferianus 0.02 1398282 1398282 S 512649 Vibrio azureus 0.01 1339993 1100375 S 691 Vibrio natriegens 0.00 239618 239618 S1 1219067 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 0.01 700545 0 S 766224 Vibrio jasicida 0.01 700545 700545 S1 1280002 Vibrio jasicida 090810c 0.11 9926608 391114 G1 2614977 unclassified Vibrio 0.02 1694441 1694441 S 2587865 Vibrio sp. THAF190c 0.02 1385741 1385741 S 2711221 Vibrio sp. ZWAL4003 0.02 1363924 1363924 S 2587862 Vibrio sp. THAF100 0.01 1233116 1233116 S 2589990 Vibrio sp. Scap24 0.01 1128480 1128480 S 2479546 Vibrio sp. HBUAS61001 0.01 1025520 1025520 S 2662262 Vibrio sp. SM1977 0.01 858371 858371 S 2714948 Vibrio sp. HDW18 0.00 287793 287793 S 1116375 Vibrio sp. EJY3 0.00 276901 276901 S 2163016 Vibrio sp. dhg 0.00 157452 157452 S 2014742 Vibrio sp. 2521-89 0.00 84487 84487 S 864336 Vibrio sp. 04Ya108 0.00 16600 16600 S 452803 Vibrio sp. 23023 0.00 8822 8822 S 452804 Vibrio sp. 09022 0.00 8675 8675 S 452802 Vibrio sp. 0908 0.00 2093 2093 S 65384 Vibrio sp. 41 0.00 1196 1196 S 2661922 Vibrio sp. THAF191d 0.00 1094 1094 S 397884 Vibrio sp. 04Ya090 0.00 734 734 S 2661921 Vibrio sp. THAF191c 0.00 32 32 S 203842 Vibrio sp. TC68 0.00 22 22 S 2587860 Vibrio sp. THAF64 0.06 5847156 5371983 S 672 Vibrio vulnificus 0.00 153295 153295 S1 748003 Vibrio vulnificus VVyb1(BT3) 0.00 135067 135067 S1 196600 Vibrio vulnificus YJ016 0.00 93138 93138 S1 914127 Vibrio vulnificus MO6-24/O 0.00 90779 90779 S1 1246305 Vibrio vulnificus Env1 0.00 1513 1513 S1 1219061 Vibrio vulnificus NBRC 15645 = ATCC 27562 0.00 1381 1381 S1 216895 Vibrio vulnificus CMCP6 0.05 4455686 4365836 S 666 Vibrio cholerae 0.00 35387 35387 S1 935297 Vibrio cholerae LMA3984-4 0.00 21097 21097 S1 345073 Vibrio cholerae O395 0.00 19578 3438 S1 127906 Vibrio cholerae O1 0.00 11480 10523 S2 686 Vibrio cholerae O1 biovar El Tor 0.00 957 957 S3 243277 Vibrio cholerae O1 biovar El Tor str. N16961 0.00 2279 2279 S2 593588 Vibrio cholerae MJ-1236 0.00 1473 1473 S2 1134456 Vibrio cholerae IEC224 0.00 738 738 S2 1224154 Vibrio cholerae O1 str. Inaba G4222 0.00 170 170 S2 914149 Vibrio cholerae O1 str. 2010EL-1786 0.00 7150 7150 S1 1420885 Vibrio cholerae MS6 0.00 3014 3014 S1 156539 Vibrio cholerae non-O1/non-O139 0.00 2053 2053 S1 579112 Vibrio cholerae M66-2 0.00 908 908 S1 412614 Vibrio cholerae 2740-80 0.00 375 375 S1 948564 Vibrio cholerae C6706 0.00 197 197 S1 345072 Vibrio cholerae MO10 0.00 91 91 S1 45888 Vibrio cholerae O139 0.04 3770903 3770903 S 676 Vibrio fluvialis 0.04 3208137 2901124 S 190893 Vibrio coralliilyticus 0.00 307013 307013 S1 1384040 Vibrio coralliilyticus OCN008 0.03 2779515 459857 G1 1891919 Vibrio oreintalis group 0.01 1170162 0 S 29498 Vibrio tubiashii 0.01 1170162 1170162 S1 1051646 Vibrio tubiashii ATCC 19109 0.01 1149496 1149496 S 300876 Vibrio europaeus 0.03 2773844 2621507 S 29494 Vibrio furnissii 0.00 152337 152337 S1 903510 Vibrio furnissii NCTC 11218 0.03 2700546 2700546 S 689 Vibrio mediterranei 0.03 2474056 2474056 S 674 Vibrio mimicus 0.02 2135995 2118758 S 55601 Vibrio anguillarum 0.00 14788 1156 S1 42323 Vibrio anguillarum serovar O1 0.00 11171 11171 S2 882944 Vibrio anguillarum M3 0.00 2461 2461 S2 882102 Vibrio anguillarum 775 0.00 2449 2449 S1 105260 Vibrio anguillarum serovar O2 0.02 2022225 2022225 S 28173 Vibrio nigripulchritudo 0.02 1943788 1943788 S 45658 Vibrio scophthalmi 0.02 1699440 1699440 S 29495 Vibrio navarrensis 0.02 1668355 24737 S 52443 Vibrio tapetis 0.02 1643618 1643618 S1 1671868 Vibrio tapetis subsp. tapetis 0.02 1665564 1665564 S 1481663 Vibrio metoecus 0.02 1655109 1655109 S 2572923 Vibrio taketomensis 0.02 1580788 1580788 S 28172 Vibrio metschnikovii 0.02 1577752 1577752 S 1435069 Vibrio tritonius 0.02 1452054 1452054 S 1481923 Vibrio astriarenae 0.02 1408563 1408563 S 1381081 Vibrio panuliri 0.02 1404693 1404693 S 170679 Vibrio chagasii 0.02 1367207 1367207 S 265668 Vibrio ponticus 0.02 1360936 1360936 S 675 Vibrio cincinnatiensis 0.01 1348537 1348537 S 553239 Vibrio breoganii 0.01 1302600 1302600 S 1074311 Vibrio alfacsensis 0.01 1288603 1288603 S 1918945 Vibrio spartinae 0.01 1218646 1218646 S 687 Vibrio gazogenes 0.01 1156389 1156389 S 673372 Vibrio casei 0.01 1140126 1140126 S 76258 Vibrio rumoiensis 0.01 1113242 1113242 S 47951 Vibrio cyclitrophicus 0.01 1092630 50883 S 246167 Vibrio crassostreae 0.01 1041747 1041747 S1 1191300 Vibrio crassostreae 9CS106 0.01 1084694 1084694 S 29497 Vibrio splendidus 0.01 998453 998453 S 1891186 Vibrio aphrogenes 0.01 856166 856166 S 693153 Vibrio atlanticus 0.01 799540 799540 S 1534743 Vibrio hyugaensis 0.01 624668 624668 S 1763883 Vibrio cidicii 0.01 461698 461698 S 2025808 Vibrio qinghaiensis 0.00 82838 82838 S 1208308 Vibrio neocaledonicus 0.07 6635708 7353 G 657 Photobacterium 0.03 2969502 2211295 S 38293 Photobacterium damselae 0.00 380072 380072 S1 85581 Photobacterium damselae subsp. damselae 0.00 378135 347269 S1 38294 Photobacterium damselae subsp. piscicida 0.00 30866 30866 S2 1200302 Photobacterium damselae subsp. piscicida DI21 0.02 1847992 0 S 74109 Photobacterium profundum 0.02 1847992 1847992 S1 298386 Photobacterium profundum SS9 0.02 1810861 0 S 1295392 Photobacterium gaetbulicola 0.02 1810861 1810861 S1 658445 Photobacterium gaetbulicola Gung47 0.06 5215557 82002 G 511678 Aliivibrio 0.03 2537355 939335 S 668 Aliivibrio fischeri 0.01 579428 579428 S1 388396 Aliivibrio fischeri MJ11 0.01 552569 552569 S1 312309 Aliivibrio fischeri ES114 0.01 466023 466023 S1 1088719 Aliivibrio fischeri SR5 0.01 1314082 1314082 S 80852 Aliivibrio wodanis 0.01 1282118 1216486 S 40269 Aliivibrio salmonicida 0.00 65632 65632 S1 316275 Aliivibrio salmonicida LFI1238 0.03 2448296 782493 G 51366 Salinivibrio 0.01 993336 993336 S 1908198 Salinivibrio kushneri 0.00 345943 0 G1 2636825 unclassified Salinivibrio 0.00 345943 345943 S 2003370 Salinivibrio sp. YCSC6 0.00 326524 326524 S 51367 Salinivibrio costicola 0.02 1617811 0 G 246861 Grimontia 0.02 1617811 1617811 S 673 Grimontia hollisae 0.01 707008 0 G 2042066 Paraphotobacterium 0.01 707008 707008 S 1755811 Paraphotobacterium marinum 0.01 648129 0 G 188143 Enterovibrio 0.01 648129 648129 S 1927128 Candidatus Enterovibrio luxaltus 1.37 123304881 171345 O 135614 Xanthomonadales 1.19 107818897 1393607 F 32033 Xanthomonadaceae 0.42 37879108 7564045 G 338 Xanthomonas 0.04 4051713 1644988 S 339 Xanthomonas campestris 0.01 834514 834514 S1 149696 Xanthomonas campestris pv. badrii 0.01 788018 716167 S1 340 Xanthomonas campestris pv. campestris 0.00 23166 23166 S2 1358004 Xanthomonas campestris pv. campestris str. CN03 0.00 17515 17515 S2 1358017 Xanthomonas campestris pv. campestris str. CN12 0.00 7887 7887 S2 1358009 Xanthomonas campestris pv. campestris str. CFBP 5817 0.00 7778 7778 S2 190485 Xanthomonas campestris pv. campestris str. ATCC 33913 0.00 5520 5520 S2 1281284 Xanthomonas campestris pv. campestris str. CN16 0.00 4021 4021 S2 1358019 Xanthomonas campestris pv. campestris str. CN18 0.00 2049 2049 S2 314565 Xanthomonas campestris pv. campestris str. 8004 0.00 1460 1460 S2 1358015 Xanthomonas campestris pv. campestris str. CN17 0.00 1047 1047 S2 1281282 Xanthomonas campestris pv. campestris str. CN14 0.00 920 920 S2 1281283 Xanthomonas campestris pv. campestris str. CN15 0.00 488 488 S2 1357999 Xanthomonas campestris pv. campestris str. CFBP 1869 0.01 516447 309582 S1 359385 Xanthomonas campestris pv. raphani 0.00 206865 206865 S2 990315 Xanthomonas campestris pv. raphani 756C 0.00 267746 267746 S1 92826 Xanthomonas campestris pv. incanae 0.04 3221459 1907311 S 347 Xanthomonas oryzae 0.01 858843 858810 S1 64187 Xanthomonas oryzae pv. oryzae 0.00 25 25 S2 360094 Xanthomonas oryzae pv. oryzae PXO99A 0.00 8 8 S2 1458476 Xanthomonas oryzae pv. oryzae PXO86 0.01 455305 451998 S1 129394 Xanthomonas oryzae pv. oryzicola 0.00 3307 3307 S2 383407 Xanthomonas oryzae pv. oryzicola BLS256 0.03 2995313 1461513 G1 2643310 unclassified Xanthomonas 0.00 423086 423086 S 2724121 Xanthomonas sp. GW 0.00 385538 385538 S 2259622 Xanthomonas sp. CPBF 424 0.00 369501 369501 S 2724123 Xanthomonas sp. SI 0.00 355540 355540 S 2724122 Xanthomonas sp. SS 0.00 135 135 S 1680158 Xanthomonas sp. ISO98C4 0.03 2938222 0 G1 643453 Xanthomonas citri group 0.03 2938222 1091426 S 346 Xanthomonas citri 0.01 604706 557907 S1 473421 Xanthomonas citri pv. glycines 0.00 21146 21146 S2 1365649 Xanthomonas citri pv. glycines CFBP 7119 0.00 16852 16852 S2 1150615 Xanthomonas citri pv. glycines str. 12-2 0.00 8720 8720 S2 1365648 Xanthomonas citri pv. glycines CFBP 2526 0.00 81 81 S2 1401257 Xanthomonas citri pv. glycines str. 8ra 0.00 325023 325023 S1 473426 Xanthomonas citri pv. vignicola 0.00 202190 196376 S1 86040 Xanthomonas citri pv. malvacearum 0.00 5402 5402 S2 1220028 Xanthomonas citri pv. malvacearum X20 0.00 412 412 S2 1220027 Xanthomonas citri pv. malvacearum X18 0.00 185652 185652 S1 473423 Xanthomonas citri pv. phaseoli var. fuscans 0.00 179681 179681 S1 76802 Xanthomonas citri pv. aurantifolii 0.00 129122 129122 S1 487838 Xanthomonas citri pv. punicae 0.00 123749 122641 S1 611301 Xanthomonas citri pv. citri 0.00 523 523 S2 1308548 Xanthomonas citri subsp. citri UI6 0.00 513 513 S2 1137651 Xanthomonas citri subsp. citri Aw12879 0.00 38 38 S2 190486 Xanthomonas citri pv. citri str. 306 0.00 34 34 S2 1308541 Xanthomonas citri subsp. citri A306 0.00 80257 0 S1 454595 Xanthomonas citri pv. anacardii 0.00 80257 80257 S2 1437881 Xanthomonas citri pv. anacardii CFBP 2913 0.00 16416 16401 S1 366649 Xanthomonas citri pv. fuscans 0.00 15 15 S2 1365651 Xanthomonas citri pv. fuscans CFBP 6988 0.02 2156160 1170203 S 56454 Xanthomonas hortorum 0.01 597158 0 S1 487904 Xanthomonas hortorum pv. carotae 0.01 597158 597158 S2 863365 Xanthomonas hortorum pv. carotae str. M081 0.00 295660 295660 S1 2754056 Xanthomonas hortorum pv. gardneri 0.00 93139 93139 S1 707209 Xanthomonas hortorum pv. vitians 0.02 2054190 578246 S 343 Xanthomonas translucens 0.01 684479 684479 S1 152263 Xanthomonas translucens pv. cerealis 0.01 481455 481455 S1 487909 Xanthomonas translucens pv. undulosa 0.00 310010 0 S1 134875 Xanthomonas translucens pv. translucens 0.00 310010 310010 S2 1261556 Xanthomonas translucens pv. translucens DSM 18974 0.02 1449129 1257718 S 56459 Xanthomonas vasicola 0.00 86606 0 S1 454958 Xanthomonas vasicola pv. musacearum 0.00 86606 86606 S2 1094184 Xanthomonas campestris pv. musacearum NCPPB 4379 0.00 59960 59960 S1 325776 Xanthomonas vasicola pv. vasculorum 0.00 44845 44845 S1 487849 Xanthomonas vasicola pv. arecae 0.02 1412878 718429 S 56448 Xanthomonas arboricola 0.00 421337 421337 S1 195709 Xanthomonas arboricola pv. juglandis 0.00 273112 269725 S1 69929 Xanthomonas arboricola pv. pruni 0.00 3387 3387 S2 1045865 Xanthomonas arboricola pv. pruni str. CFBP 5530 0.02 1378895 1119159 S 56460 Xanthomonas vesicatoria 0.00 259736 259736 S1 925775 Xanthomonas vesicatoria ATCC 35937 0.01 1119334 1119334 S 56458 Xanthomonas sacchari 0.01 1054010 1032691 S 29447 Xanthomonas albilineans 0.00 21319 21319 S1 380358 Xanthomonas albilineans GPE PC73 0.01 1006808 1006808 S 48664 Xanthomonas fragariae 0.01 943945 943945 S 56453 Xanthomonas cucurbitae 0.01 928030 928030 S 56464 Xanthomonas theicola 0.01 843957 0 S 56450 Xanthomonas cassavae 0.01 843957 843957 S1 1219375 Xanthomonas cassavae CFBP 4642 0.01 838091 838091 S 56455 Xanthomonas hyacinthi 0.01 772388 333 S 53413 Xanthomonas axonopodis 0.01 710559 0 S1 1982678 Xanthomonas axonopodis subcluster 9.3 0.01 710559 710559 S2 325777 Xanthomonas axonopodis pv. vasculorum 0.00 58041 58041 S1 1101443 Xanthomonas axonopodis pv. commiphoreae 0.00 3455 3455 S1 1304892 Xanthomonas axonopodis Xac29-1 0.01 599673 303895 S 456327 Xanthomonas euvesicatoria 0.00 118370 0 S1 207721 Xanthomonas euvesicatoria pv. allii 0.00 118370 118370 S2 1437449 Xanthomonas euvesicatoria pv. allii CFBP 6369 0.00 95679 0 S1 359387 Xanthomonas euvesicatoria pv. alfalfae 0.00 95679 95679 S2 1365647 Xanthomonas euvesicatoria pv. alfalfae CFBP 3836 0.00 73294 0 S1 189396 Xanthomonas euvesicatoria pv. citrumelonis 0.00 73294 73294 S2 981368 Xanthomonas axonopodis pv. citrumelo F1 0.00 8435 8435 S1 316273 Xanthomonas campestris pv. vesicatoria str. 85-10 0.00 447420 1016 S 1985254 Xanthomonas phaseoli 0.00 410373 0 S1 92828 Xanthomonas phaseoli pv. dieffenbachiae 0.00 410373 410373 S2 1437877 Xanthomonas phaseoli pv. dieffenbachiae LMG 695 0.00 36031 36031 S1 317013 Xanthomonas phaseoli pv. phaseoli 0.00 103448 103139 S 442694 Xanthomonas perforans 0.00 309 309 S1 925776 Xanthomonas perforans 91-118 0.39 35487760 6253807 G 40323 Stenotrophomonas 0.22 19438840 2448567 G1 995085 Stenotrophomonas maltophilia group 0.15 13673562 13086361 S 40324 Stenotrophomonas maltophilia 0.00 293377 293377 S1 868597 Stenotrophomonas maltophilia JV3 0.00 131596 131596 S1 391008 Stenotrophomonas maltophilia R551-3 0.00 109494 109494 S1 1163399 Stenotrophomonas maltophilia D457 0.00 39333 39333 S1 522373 Stenotrophomonas maltophilia K279a 0.00 13401 13401 S1 1190567 Stenotrophomonas maltophilia EPM1 0.01 811663 811663 S 2072414 Stenotrophomonas sp. ESTM1D_MKCIP4_1 0.01 702050 702050 S 2072413 Stenotrophomonas sp. SAU14A_NAIMI4_5 0.01 481484 481484 S 2072405 Stenotrophomonas sp. ZAC14D2_NAIMI4_7 0.00 364656 364656 S 2072412 Stenotrophomonas sp. ZAC14A_NAIMI4_1 0.00 329753 329753 S 2072407 Stenotrophomonas sp. YAU14D1_LEIMI4_1 0.00 305600 305600 S 2072406 Stenotrophomonas sp. ZAC14D2_NAIMI4_6 0.00 162868 162868 S 2072409 Stenotrophomonas sp. SAU14A_NAIMI4_8 0.00 157995 157995 S 2072408 Stenotrophomonas sp. YAU14A_MKIMI4_1 0.00 382 382 S 2072410 Stenotrophomonas sp. ZAC14D1_NAIMI4_6 0.00 260 260 S 2072411 Stenotrophomonas sp. ZAC14D1_NAIMI4_1 0.05 4698245 347710 G1 196198 unclassified Stenotrophomonas 0.01 992272 992272 S 1904944 Stenotrophomonas sp. LM091 0.01 876303 876303 S 2691571 Stenotrophomonas sp. 364 0.01 714003 714003 S 2742129 Stenotrophomonas sp. NA06056 0.00 407567 407567 S 2005046 Stenotrophomonas sp. WZN-1 0.00 395493 395493 S 2303750 Stenotrophomonas sp. G4 0.00 204473 204473 S 2282124 Stenotrophomonas sp. ASS1 0.00 201849 201849 S 1827305 Stenotrophomonas sp. MYb57 0.00 188518 188518 S 2211160 Stenotrophomonas sp. pho 0.00 187880 187880 S 2040586 Stenotrophomonas sp. Pemsol 0.00 171947 171947 S 2546450 Stenotrophomonas sp. DAIF1 0.00 8727 8727 S 2565559 Stenotrophomonas sp. PAMC25021 0.00 1503 1503 S 1793721 Stenotrophomonas sp. KCTC 12332 0.03 2838555 2838555 S 216778 Stenotrophomonas rhizophila 0.03 2257364 2257364 S 128780 Stenotrophomonas acidaminiphila 0.00 949 949 S 83617 Stenotrophomonas nitritireducens 0.18 16012403 394795 G 68 Lysobacter 0.03 2759301 2759301 S 69 Lysobacter enzymogenes 0.03 2392625 1801 G1 2635362 unclassified Lysobacter 0.01 890748 890748 S 2290922 Lysobacter sp. TY2-98 0.01 822059 822059 S 2763317 Lysobacter sp. II4 0.01 678017 678017 S 2714936 Lysobacter sp. HDW10 0.03 2350195 2350195 S 435897 Lysobacter capsici 0.02 1971986 1971986 S 84531 Lysobacter antibioticus 0.02 1504307 1504307 S 262324 Lysobacter gummosus 0.01 1119560 1119560 S 453783 Lysobacter soli 0.01 1067955 1067955 S 2591633 Lysobacter alkalisoli 0.01 1060633 1060633 S 1605891 Lysobacter maris 0.01 698829 698829 S 1324796 Lysobacter lycopersici 0.01 692217 692217 S 2698682 Lysobacter oculi 0.05 4330755 10030 G 83618 Pseudoxanthomonas 0.02 1846591 980185 S 314722 Pseudoxanthomonas suwonensis 0.01 866406 866406 S1 743721 Pseudoxanthomonas suwonensis 11-1 0.02 1564032 1564032 S 128785 Pseudoxanthomonas mexicana 0.01 910102 0 S 415229 Pseudoxanthomonas spadix 0.01 910102 910102 S1 1045855 Pseudoxanthomonas spadix BD-a59 0.05 4189367 78522 G 83614 Luteimonas 0.02 1641926 3443 G1 2629088 unclassified Luteimonas 0.01 831926 831926 S 1896164 Luteimonas sp. JM171 0.01 806557 806557 S 2508168 Luteimonas sp. YGD11-2 0.01 935561 935561 S 2006110 Luteimonas chenhongjianii 0.01 768028 768028 S 2565782 Luteimonas yindakuii 0.01 765330 765330 S 1176533 Luteimonas granuli 0.04 3346144 41077 G 141948 Thermomonas 0.02 1497707 24521 G1 2633315 unclassified Thermomonas 0.01 739803 739803 S 2714945 Thermomonas sp. HDW16 0.01 733383 733383 S 2202149 Thermomonas sp. SY21 0.01 944355 944355 S 1463158 Thermomonas carbonis 0.01 863005 863005 S 215691 Thermomonas brevis 0.03 2880941 22537 G 2370 Xylella 0.02 2017643 1803363 S 2371 Xylella fastidiosa 0.00 114610 0 S1 671135 Xylella fastidiosa subsp. sandyi 0.00 114610 114610 S2 155920 Xylella fastidiosa subsp. sandyi Ann-1 0.00 52173 52173 S1 1401256 Xylella fastidiosa MUL0034 0.00 32921 32921 S1 644357 Xylella fastidiosa subsp. multiplex 0.00 7412 7412 S1 405440 Xylella fastidiosa M12 0.00 5556 1576 S1 644356 Xylella fastidiosa subsp. fastidiosa 0.00 3980 3980 S2 788929 Xylella fastidiosa subsp. fastidiosa GB514 0.00 981 981 S1 183190 Xylella fastidiosa Temecula1 0.00 434 434 S1 160492 Xylella fastidiosa 9a5c 0.00 186 186 S1 405441 Xylella fastidiosa M23 0.00 7 7 S1 698414 Xylella fastidiosa subsp. pauca 0.01 840761 840761 S 1444770 Xylella taiwanensis 0.02 1448267 0 G 2709666 Pseudolysobacter 0.02 1448267 1448267 S 2511995 Pseudolysobacter antarcticus 0.01 850545 0 G 490567 Arenimonas 0.01 850545 850545 S 370777 Arenimonas daejeonensis 0.17 15314639 86975 F 1775411 Rhodanobacteraceae 0.06 5056412 79923 G 231454 Dyella 0.03 2430282 1191 G1 2634549 unclassified Dyella 0.02 1406141 1406141 S 2763498 Dyella sp. G9 0.01 1022950 1022950 S 2501295 Dyella sp. M7H15-1 0.01 1349182 0 S 231455 Dyella japonica 0.01 1349182 1349182 S1 1217721 Dyella japonica A8 0.01 1197025 1197025 S 445710 Dyella thiooxydans 0.03 2803137 16871 G 242605 Luteibacter 0.02 1424510 0 S 242606 Luteibacter rhizovicinus 0.02 1424510 1424510 S1 1440763 Luteibacter rhizovicinus DSM 16549 0.02 1361756 1361756 S 2589080 Luteibacter pinisoli 0.03 2374311 7703 G 75309 Rhodanobacter 0.01 1200935 1200935 S 582702 Rhodanobacter glycinis 0.01 1165673 1165673 S 666685 Rhodanobacter denitrificans 0.02 1914548 0 G 2233801 Ahniella 0.02 1914548 1914548 S 2021234 Ahniella affigens 0.01 1244454 0 G 323413 Dokdonella 0.01 1244454 0 S 323415 Dokdonella koreensis 0.01 1244454 1244454 S1 1300342 Dokdonella koreensis DS-123 0.01 1091013 0 G 70411 Frateuria 0.01 1091013 0 S 81475 Frateuria aurantia 0.01 1091013 1091013 S1 767434 Frateuria aurantia DSM 6220 0.01 743789 0 G 2707020 Aerosticca 0.01 743789 743789 S 2010829 Aerosticca soli 1.05 95038394 48164 O 135619 Oceanospirillales 0.56 50428231 301957 F 28256 Halomonadaceae 0.43 38615767 5869334 G 2745 Halomonas 0.22 19596524 3769412 G1 2609666 unclassified Halomonas 0.02 1505329 1505329 S 2562282 Halomonas sp. Y2R2 0.02 1433317 1433317 S 2497861 Halomonas sp. BC-M4-5 0.01 1242155 1242155 S 1504981 Halomonas sp. KO116 0.01 1109909 1109909 S 2749040 Halomonas sp. SH5A2 0.01 1061516 1061516 S 1118153 Halomonas sp. GFAJ-1 0.01 1010443 1010443 S 1883416 Halomonas sp. 1513 0.01 936449 936449 S 2609667 Halomonas sp. NBT06E8 0.01 911841 911841 S 2587844 Halomonas sp. THAF5a 0.01 858129 858129 S 1971364 Halomonas sp. GT 0.01 795694 795694 S 2587849 Halomonas sp. THAF12 0.01 769630 769630 S 1609967 Halomonas sp. HG01 0.01 669461 669461 S 2014541 Halomonas sp. N3-2A 0.01 660641 660641 S 2306583 Halomonas sp. JS92-SW72 0.01 587060 587060 S 2730360 Halomonas sp. PGE1 0.01 584304 584304 S 2136172 Halomonas sp. SF2003 0.01 548747 548747 S 2661553 Halomonas sp. AM6 0.00 440259 440259 S 2576841 Halomonas sp. PA16-9 0.00 282735 282735 S 1761789 Halomonas sp. hl-4 0.00 268554 268554 S 1666906 Halomonas sp. HL-93 0.00 138733 138733 S 1346287 Halomonas sp. A3H3 0.00 7277 7277 S 1250400 Halomonas sp. ZM3 0.00 3256 3256 S 1630300 Halomonas sp. Ant2 0.00 1351 1351 S 223901 Halomonas sp. 40 0.00 136 136 S 1610576 Halomonas sp. R57-5 0.00 107 107 S 1949203 Halomonas sp. 'Soap Lake #6' 0.00 79 79 S 1962264 Halomonas sp. 'Soap Lake #7' 0.03 2266875 2266875 S 29570 Halomonas meridiana 0.02 1544690 1544690 S 115561 Halomonas hydrothermalis 0.02 1443176 1443176 S 1178482 Halomonas huangheensis 0.01 1206473 1206473 S 1081866 Halomonas socia 0.01 1163071 0 S 2746 Halomonas elongata 0.01 1163071 1163071 S1 768066 Halomonas elongata DSM 2581 0.01 1135098 1135098 S 507626 Halomonas chromatireducens 0.01 1055085 1055085 S 475662 Halomonas beimenensis 0.01 907783 907783 S 1897729 Halomonas aestuarii 0.01 875010 875010 S 29571 Halomonas subglaciescola 0.01 568289 568289 S 44935 Halomonas venusta 0.01 476639 476639 S 664683 Halomonas titanicae 0.00 263938 263938 S 213554 Halomonas campaniensis 0.00 243772 243772 S 272774 Halomonas alkaliphila 0.00 10 10 S 229007 Halomonas ventosae 0.04 3185492 170052 G 504090 Kushneria 0.01 1124126 0 G1 2648671 unclassified Kushneria 0.01 1124126 1124126 S 657387 Kushneria sp. YCWA18 0.01 958845 958845 S 157779 Kushneria marisflavi 0.01 932469 932469 S 698828 Kushneria konosiri 0.03 2329858 818263 G 204286 Cobetia 0.01 1238390 21 G1 2609414 unclassified Cobetia 0.01 1208175 1208175 S 2686360 Cobetia sp. L2A1 0.00 30194 30194 S 2053669 Cobetia sp. ICG0124 0.00 273205 273205 S 28258 Cobetia marina 0.01 1288993 0 G 376488 Halotalea 0.01 1288993 1288993 S 376489 Halotalea alkalilenta 0.01 1249139 131 F1 114403 Zymobacter group 0.01 920877 0 G 33073 Zymobacter 0.01 920877 920877 S 33074 Zymobacter palmae 0.00 149562 0 G 235572 Candidatus Portiera 0.00 149562 148690 S 91844 Candidatus Portiera aleyrodidarum 0.00 523 523 S1 1239881 Candidatus Portiera aleyrodidarum BT-QVLC 0.00 213 213 S1 1206109 Candidatus Portiera aleyrodidarum BT-B-HRs 0.00 136 136 S1 1163752 Candidatus Portiera aleyrodidarum MED (Bemisia tabaci) 0.00 97035 0 G 114185 Candidatus Carsonella 0.00 97035 37231 S 114186 Candidatus Carsonella ruddii 0.00 15567 15567 S1 387662 Candidatus Carsonella ruddii PV 0.00 12890 12890 S1 1202540 Candidatus Carsonella ruddii PC isolate NHV 0.00 11427 11427 S1 1202539 Candidatus Carsonella ruddii HT isolate Thao2000 0.00 9968 9968 S1 1202536 Candidatus Carsonella ruddii CE isolate Thao2000 0.00 9847 9847 S1 1202537 Candidatus Carsonella ruddii CS isolate Thao2000 0.00 105 105 S1 667013 Candidatus Carsonella ruddii DC 0.00 81534 0 G 1495768 Candidatus Evansia 0.00 81534 81534 S 1495769 Candidatus Evansia muelleri 0.01 1248212 0 G 404432 Salinicola 0.01 1248212 1248212 S 1771309 Salinicola tamaricis 0.01 1123617 0 G 1897649 Pistricoccus 0.01 1123617 1123617 S 1883414 Pistricoccus aurantiacus 0.01 1085196 0 G 42054 Chromohalobacter 0.01 1085196 0 S 158080 Chromohalobacter salexigens 0.01 1085196 1085196 S1 290398 Chromohalobacter salexigens DSM 3043 0.21 18865953 7038 F 135620 Oceanospirillaceae 0.08 7291495 49189 G 28253 Marinomonas 0.03 2731684 22004 G1 196814 unclassified Marinomonas 0.02 1523547 1523547 S 400668 Marinomonas sp. MWYL1 0.01 1186133 1186133 S 2071621 Marinomonas sp. FW-1 0.02 1863210 1863210 S 178399 Marinomonas primoryensis 0.02 1449653 0 S 119864 Marinomonas mediterranea 0.02 1449653 1449653 S1 717774 Marinomonas mediterranea MMB-1 0.01 1197759 0 S 936476 Marinomonas posidonica 0.01 1197759 1197759 S1 491952 Marinomonas posidonica IVIA-Po-181 0.03 2353827 1444 G 75687 Neptunomonas 0.01 1240562 1240562 S 1572645 Neptunomonas phycophila 0.01 1111821 1111821 S 1031538 Neptunomonas concharum 0.03 2331117 84 G 48075 Marinobacterium 0.02 1586769 1586769 S 1821621 Marinobacterium aestuarii 0.01 744264 0 G1 2644139 unclassified Marinobacterium 0.01 744264 744264 S 2668067 Marinobacterium sp. LSUCC0821 0.02 1776164 0 G 187492 Thalassolituus 0.02 1776164 1315783 S 187493 Thalassolituus oleivorans 0.00 240944 240944 S1 1298593 Thalassolituus oleivorans MIL-1 0.00 219437 219437 S1 1208320 Thalassolituus oleivorans R6-15 0.02 1364195 0 G 188907 Oleispira 0.02 1364195 0 S 188908 Oleispira antarctica 0.02 1364195 1364195 S1 698738 Oleispira antarctica RB-8 0.01 1337898 0 G 1537406 Bacterioplanes 0.01 1337898 1337898 S 1249553 Bacterioplanes sanyensis 0.01 1285484 0 G 267849 Nitrincola 0.01 1285484 0 G1 2614692 unclassified Nitrincola 0.01 1285484 1285484 S 2614693 Nitrincola sp. KXZD1103 0.01 1118735 0 G 599651 Bermanella 0.01 1118735 1118735 S 207949 Bermanella marisrubri 0.08 7652218 243 F 224372 Alcanivoracaceae 0.07 6100594 1285141 G 59753 Alcanivorax 0.01 1326665 14 G1 2638842 unclassified Alcanivorax 0.01 1238383 1238383 S 2014542 Alcanivorax sp. N3-2A 0.00 88268 88268 S 1113728 Alcanivorax sp. NBRC 101098 0.01 1232027 0 S 1306787 Alcanivorax pacificus 0.01 1232027 1232027 S1 391936 Alcanivorax pacificus W11-5 0.01 1118402 0 S 285091 Alcanivorax dieselolei 0.01 1118402 1118402 S1 930169 Alcanivorax dieselolei B5 0.01 1047050 1047050 S 1094342 Alcanivorax xenomutans 0.00 91309 0 S 59754 Alcanivorax borkumensis 0.00 91309 91309 S1 393595 Alcanivorax borkumensis SK2 0.02 1551381 0 G 2025617 Ketobacter 0.02 1551381 1551381 S 1917421 Ketobacter alkanivorans 0.07 6186641 56 F 224379 Hahellaceae 0.05 4156315 294289 G 158481 Hahella 0.02 1970135 0 S 158327 Hahella chejuensis 0.02 1970135 1970135 S1 349521 Hahella chejuensis KCTC 2396 0.02 1891891 0 G1 2624107 unclassified Hahella 0.02 1891891 1891891 S 1628392 Hahella sp. KA22 0.02 2030270 0 G 2768738 Spartinivicinus 0.02 2030270 2030270 S 2683272 Spartinivicinus ruber 0.05 4310446 407 F 255527 Saccharospirillaceae 0.02 2026646 0 G 1445504 Gynuella 0.02 2026646 0 S 1445505 Gynuella sunshinyii 0.02 2026646 2026646 S1 1445510 Gynuella sunshinyii YC6258 0.01 1143326 0 G 230494 Reinekea 0.01 1143326 1143326 S 1336806 Reinekea forsetii 0.01 1140067 0 G 231683 Saccharospirillum 0.01 1140067 1140067 S 2161747 Saccharospirillum mangrovi 0.04 3275606 0 F 1920240 Kangiellaceae 0.04 3275606 26630 G 261963 Kangiella 0.01 877254 0 S 261964 Kangiella koreensis 0.01 877254 877254 S1 523791 Kangiella koreensis DSM 16069 0.01 813894 813894 S 1561924 Kangiella profundi 0.01 780184 780184 S 1144748 Kangiella sediminilitoris 0.01 777644 777644 S 914150 Kangiella geojedonensis 0.02 1980869 0 F 191033 Oleiphilaceae 0.02 1980869 0 G 141450 Oleiphilus 0.02 1980869 1980869 S 141451 Oleiphilus messinensis 0.02 1551829 0 F 2066474 Endozoicomonadaceae 0.02 1551829 0 G 305899 Endozoicomonas 0.02 1551829 0 S 1027273 Endozoicomonas montiporae 0.02 1551829 1551829 S1 570277 Endozoicomonas montiporae CL-33 0.01 738437 0 F 449732 Litoricolaceae 0.01 738437 0 G 418700 Litoricola 0.01 738437 738437 S 418701 Litoricola lipolytica 0.50 45131929 29699 O 135613 Chromatiales 0.20 17899874 63084 F 1046 Chromatiaceae 0.05 4435802 252859 G 1227 Nitrosococcus 0.01 1152380 0 S 133539 Nitrosococcus halophilus 0.01 1152380 1152380 S1 472759 Nitrosococcus halophilus Nc 4 0.01 1122764 1122764 S 1814290 Nitrosococcus wardiae 0.01 977330 7146 S 1229 Nitrosococcus oceani 0.01 970184 970184 S1 323261 Nitrosococcus oceani ATCC 19707 0.01 930469 0 S 473531 Nitrosococcus watsonii 0.01 930469 930469 S1 105559 Nitrosococcus watsonii C-113 0.03 2443041 0 G 67575 Rheinheimera 0.03 2443041 1059 G1 115860 unclassified Rheinheimera 0.02 1434839 1434839 S 2498451 Rheinheimera sp. LHK132 0.01 1007143 1007143 S 2545632 Rheinheimera sp. D18 0.03 2365913 40 F1 82569 unclassified Chromatiaceae 0.02 1481317 1481317 S 1978339 Chromatiaceae bacterium 2141T.STBD.0c.01a 0.01 884556 884556 S 2699430 Chromatiaceae bacterium No.7 0.02 2250160 0 G 53392 Thiodictyon 0.02 2250160 2250160 S 1166950 Candidatus Thiodictyon syntrophicum 0.02 1465824 0 G 13724 Thiocystis 0.02 1465824 0 S 73141 Thiocystis violascens 0.02 1465824 1465824 S1 765911 Thiocystis violascens DSM 198 0.01 1241196 0 G 156885 Thioflavicoccus 0.01 1241196 0 S 80679 Thioflavicoccus mobilis 0.01 1241196 1241196 S1 765912 Thioflavicoccus mobilis 8321 0.01 1091509 0 G 85076 Marichromatium 0.01 1091509 0 S 37487 Marichromatium purpuratum 0.01 1091509 1091509 S1 765910 Marichromatium purpuratum 984 0.01 1058200 0 G 85072 Allochromatium 0.01 1058200 0 S 1049 Allochromatium vinosum 0.01 1058200 1058200 S1 572477 Allochromatium vinosum DSM 180 0.01 856085 0 G 85073 Thermochromatium 0.01 856085 0 S 1050 Thermochromatium tepidum 0.01 856085 856085 S1 316276 Thermochromatium tepidum ATCC 43061 0.01 629060 0 G 1980513 Candidatus Nitrosoglobus 0.01 629060 629060 S 1630141 Candidatus Nitrosoglobus terrae 0.19 17039156 17126 F 72276 Ectothiorhodospiraceae 0.05 4950330 200569 G 106633 Thioalkalivibrio 0.01 1027133 0 S 186931 Thioalkalivibrio nitratireducens 0.01 1027133 1027133 S1 1255043 Thioalkalivibrio nitratireducens DSM 14787 0.01 1009817 0 S 1033854 Thioalkalivibrio sulfidiphilus 0.01 1009817 1009817 S1 396588 Thioalkalivibrio sulfidiphilus HL-EbGr7 0.01 967843 0 S 108010 Thioalkalivibrio paradoxus 0.01 967843 967843 S1 713585 Thioalkalivibrio paradoxus ARh 1 0.01 872769 872769 S 106634 Thioalkalivibrio versutus 0.01 872199 0 G1 2621013 unclassified Thioalkalivibrio 0.01 872199 872199 S 396595 Thioalkalivibrio sp. K90mix 0.03 3152075 6362 G 1765964 Acidihalobacter 0.02 2124465 2124465 S 160660 Acidihalobacter prosperus 0.01 1021248 1021248 S 1765967 Acidihalobacter ferrooxidans 0.03 2298317 25287 G 1335745 Spiribacter 0.01 587227 0 G1 2629425 unclassified Spiribacter 0.01 587227 587227 S 2666185 Spiribacter sp. 2438 0.01 578509 578509 S 1335757 Spiribacter curvatus 0.01 568364 568364 S 1855875 Spiribacter roseus 0.01 538930 0 S 1335746 Spiribacter salinus 0.01 538930 538930 S1 1260251 Spiribacter salinus M19-40 0.02 2031151 15 F1 187271 unclassified Ectothiorhodospiraceae 0.01 1173152 1173152 S 947515 Ectothiorhodospiraceae bacterium BW-2 0.01 857984 857984 S 2740164 Ectothiorhodospiraceae bacterium 2226 0.02 1916600 180765 G 1051 Ectothiorhodospira 0.01 877044 0 G1 2684909 unclassified Ectothiorhodospira 0.01 877044 877044 S 1442136 Ectothiorhodospira sp. BSL-9 0.01 858791 858791 S 421628 Ectothiorhodospira haloalkaliphila 0.02 1689709 793 G 85108 Halorhodospira 0.01 872139 872139 S 1052 Halorhodospira halochloris 0.01 816777 0 S 1053 Halorhodospira halophila 0.01 816777 816777 S1 349124 Halorhodospira halophila SL1 0.01 983848 0 G 133193 Alkalilimnicola 0.01 983848 0 S 351052 Alkalilimnicola ehrlichii 0.01 983848 983848 S1 187272 Alkalilimnicola ehrlichii MLHE-1 0.04 3410841 40 F 449719 Granulosicoccaceae 0.03 2434978 0 G 437504 Granulosicoccus 0.03 2434978 0 S 437505 Granulosicoccus antarcticus 0.03 2434978 2434978 S1 1192854 Granulosicoccus antarcticus IMCC3135 0.01 975823 0 G 1860077 Sulfuriflexus 0.01 975823 975823 S 1811807 Sulfuriflexus mobilis 0.02 1696183 0 F 255526 Halothiobacillaceae 0.02 1696183 1446 G 109262 Halothiobacillus 0.01 894161 0 G1 2636392 unclassified Halothiobacillus 0.01 894161 894161 S 1860122 Halothiobacillus sp. LS2 0.01 800576 0 S 927 Halothiobacillus neapolitanus 0.01 800576 800576 S1 555778 Halothiobacillus neapolitanus c2 0.01 1286189 0 F 1738654 Woeseiaceae 0.01 1286189 0 G 1738655 Woeseia 0.01 1286189 1286189 S 1548547 Woeseia oceani 0.01 1130039 0 F 1676141 Wenzhouxiangellaceae 0.01 1130039 0 G 1676142 Wenzhouxiangella 0.01 1130039 1130039 S 1579979 Wenzhouxiangella marina 0.01 963012 0 O1 451214 Chromatiales incertae sedis 0.01 963012 0 G 1273155 Thiohalobacter 0.01 963012 963012 S 585455 Thiohalobacter thiocyanaticus 0.01 924303 0 F 1096778 Thioalkalispiraceae 0.01 924303 0 G 2034504 Sulfurivermis 0.01 924303 924303 S 1972068 Sulfurivermis fontis 0.01 752633 0 F 2035710 Thioalkalibacteraceae 0.01 752633 0 G 2035712 Guyparkeria 0.01 752633 752633 S 47960 Guyparkeria halophila 0.46 41580964 17223 O 1706369 Cellvibrionales 0.18 15974224 4115 F 1706371 Cellvibrionaceae 0.08 7667776 9111 G 10 Cellvibrio 0.07 6233707 63836 G1 2624793 unclassified Cellvibrio 0.02 1749327 1749327 S 2303332 Cellvibrio sp. KY-GH-1 0.02 1653660 1653660 S 1987723 Cellvibrio sp. PSBB006 0.02 1422090 1422090 S 1945512 Cellvibrio sp. PSBB023 0.01 1344794 1344794 S 454662 Cellvibrio sp. KY-YJ-3 0.02 1424958 1424837 S 155077 Cellvibrio japonicus 0.00 121 121 S1 498211 Cellvibrio japonicus Ueda107 0.03 3156979 842 G 2425 Teredinibacter 0.02 1632434 0 S 2426 Teredinibacter turnerae 0.02 1632434 1632434 S1 377629 Teredinibacter turnerae T7901 0.02 1523703 0 G1 2648457 unclassified Teredinibacter 0.02 1523703 1523703 S 2731755 Teredinibacter sp. Bs08 0.02 2207473 0 G 2036021 Agarilytica 0.02 2207473 2207473 S 1737490 Agarilytica rhodophyticola 0.02 1589398 0 G 316625 Saccharophagus 0.02 1589398 0 S 86304 Saccharophagus degradans 0.02 1589398 1589398 S1 203122 Saccharophagus degradans 2-40 0.01 1348483 0 G 447467 Simiduia 0.01 1348483 0 S 447471 Simiduia agarivorans 0.01 1348483 1348483 S1 1117647 Simiduia agarivorans SA1 = DSM 21679 0.15 13796281 0 F 1706373 Microbulbiferaceae 0.15 13796281 104642 G 48073 Microbulbifer 0.10 8738622 94909 G1 2619833 unclassified Microbulbifer 0.02 1536656 1536656 S 359370 Microbulbifer sp. A4B17 0.02 1495532 1495532 S 2591606 Microbulbifer sp. GL-2 0.02 1443434 1443434 S 2587856 Microbulbifer sp. THAF38 0.02 1401983 1401983 S 2681547 Microbulbifer sp. SH-1 0.02 1400433 1400433 S 1516059 Microbulbifer sp. ALW1 0.02 1365675 1365675 S 2745199 Microbulbifer sp. YPW1 0.01 1304246 1304246 S 260552 Microbulbifer agarilyticus 0.01 1250997 1250997 S 48074 Microbulbifer hydrolyticus 0.01 1209405 1209405 S 252514 Microbulbifer thermotolerans 0.01 1188369 1188369 S 1769779 Microbulbifer aggregans 0.09 7995158 4324 F 1706372 Halieaceae 0.05 4238938 10661 G 1217416 Halioglobus 0.02 1586783 1586783 S 930806 Halioglobus pacificus 0.02 1361612 1361612 S 2601894 Halioglobus maricola 0.01 1279882 1279882 S 930805 Halioglobus japonicus 0.02 1441339 0 G 2678529 Kineobactrum 0.02 1441339 0 G1 2678530 unclassified Kineobactrum 0.02 1441339 1441339 S 2708301 Kineobactrum sp. M2 0.01 1342159 0 G 393661 Congregibacter 0.01 1342159 0 S 393662 Congregibacter litoralis 0.01 1342159 1342159 S1 314285 Congregibacter litoralis KT71 0.01 968398 0 F1 1706379 unclassified Halieaceae 0.01 968398 968398 S 2518989 Halieaceae bacterium IMCC3088 0.04 3798078 5432 F 1706375 Spongiibacteraceae 0.02 1408890 0 G 1084558 Oceanicoccus 0.02 1408890 1408890 S 716816 Oceanicoccus sagamiensis 0.01 1307892 0 G 1434050 Zhongshania 0.01 1307892 1307892 S 1470434 Zhongshania aliphaticivorans 0.01 1075864 0 G 630749 Spongiibacter 0.01 1075864 0 G1 2631504 unclassified Spongiibacter 0.01 1075864 1075864 S 1620392 Spongiibacter sp. IMCC21906 0.44 39597093 0 O 135625 Pasteurellales 0.44 39597093 1440321 F 712 Pasteurellaceae 0.09 7756642 1066985 G 724 Haemophilus 0.02 2029933 1905485 S 727 Haemophilus influenzae 0.00 28889 28889 S1 1232659 Haemophilus influenzae 2019 0.00 20999 20999 S1 1295140 Haemophilus influenzae CGSHiCZ412602 0.00 16461 16461 S1 1334187 Haemophilus influenzae KR494 0.00 15537 15537 S1 725 Haemophilus influenzae biotype aegyptius 0.00 13694 13694 S1 262728 Haemophilus influenzae R2866 0.00 11326 11326 S1 262727 Haemophilus influenzae R2846 0.00 7539 7539 S1 862964 Haemophilus influenzae 10810 0.00 6107 6107 S1 281310 Haemophilus influenzae 86-028NP 0.00 3800 3800 S1 71421 Haemophilus influenzae Rd KW20 0.00 86 86 S1 866630 Haemophilus influenzae F3031 0.00 10 10 S1 935897 Haemophilus influenzae F3047 0.02 1630649 1278011 S 729 Haemophilus parainfluenzae 0.00 352638 352638 S1 862965 Haemophilus parainfluenzae T3T1 0.01 900000 900000 S 726 Haemophilus haemolyticus 0.01 670928 670834 S 730 [Haemophilus] ducreyi 0.00 94 94 S1 233412 [Haemophilus] ducreyi 35000HP 0.01 604612 604612 S 249188 Haemophilus pittmaniae 0.01 577370 577370 S 735 Haemophilus parahaemolyticus 0.00 253965 0 G1 2609962 unclassified Haemophilus 0.00 253965 253965 S 712310 Haemophilus sp. oral taxon 036 0.00 22200 22200 S 197575 Haemophilus aegyptius 0.06 5523794 360194 G 75984 Mannheimia 0.02 1399833 568290 G1 2645054 unclassified Mannheimia 0.00 450707 450707 S 1432056 Mannheimia sp. USDA-ARS-USMARC-1261 0.00 157755 157755 S 2679994 Mannheimia sp. ZY170218 0.00 86000 86000 S 2744472 Mannheimia sp. 16CN0041 0.00 70624 70624 S 111844 Mannheimia sp. BNO311 0.00 66457 66457 S 2744024 Mannheimia sp. 17CN0883 0.02 1390991 1390991 S 85402 Mannheimia granulomatis 0.01 1187039 1129496 S 75985 Mannheimia haemolytica 0.00 41683 41683 S1 1222034 Mannheimia haemolytica USDA-ARS-USMARC-184 0.00 11745 11745 S1 1249526 Mannheimia haemolytica USDA-ARS-USMARC-185 0.00 1147 1147 S1 1311760 Mannheimia haemolytica D174 0.00 1123 1123 S1 1261126 Mannheimia haemolytica D153 0.00 1107 1107 S1 1311759 Mannheimia haemolytica D171 0.00 510 510 S1 1366053 Mannheimia haemolytica USMARC_2286 0.00 123 123 S1 1249531 Mannheimia haemolytica USDA-ARS-USMARC-183 0.00 105 105 S1 1316932 Mannheimia haemolytica M42548 0.01 1185737 950385 S 85404 Mannheimia varigena 0.00 91901 91901 S1 1433287 Mannheimia varigena USDA-ARS-USMARC-1296 0.00 77784 77784 S1 1434214 Mannheimia varigena USDA-ARS-USMARC-1312 0.00 65667 65667 S1 1434215 Mannheimia varigena USDA-ARS-USMARC-1388 0.05 4867962 701281 G 713 Actinobacillus 0.01 688737 0 S 67854 Actinobacillus succinogenes 0.01 688737 688737 S1 339671 Actinobacillus succinogenes 130Z 0.01 681448 534894 S 715 Actinobacillus pleuropneumoniae 0.00 48471 0 S1 44294 Actinobacillus pleuropneumoniae serovar 5 0.00 48471 48471 S2 416269 Actinobacillus pleuropneumoniae serovar 5b str. L20 0.00 37407 37407 S1 754345 Actinobacillus pleuropneumoniae serovar 8 0.00 35303 0 S1 209841 Actinobacillus pleuropneumoniae serovar 7 0.00 35303 35303 S2 537457 Actinobacillus pleuropneumoniae serovar 7 str. AP76 0.00 24916 0 S1 434270 Actinobacillus pleuropneumoniae serovar 3 0.00 24916 24916 S2 434271 Actinobacillus pleuropneumoniae serovar 3 str. JL03 0.00 457 0 S1 40325 Actinobacillus pleuropneumoniae serovar 1 0.00 457 457 S2 228399 Actinobacillus pleuropneumoniae serovar 1 str. 4074 0.01 603814 603814 S 189834 Actinobacillus porcitonsillarum 0.01 539783 539783 S 51161 Actinobacillus delphinicola 0.01 493089 493089 S 51049 Actinobacillus indolicus 0.01 469683 451600 S 716 Actinobacillus suis 0.00 18038 18038 S1 696748 Actinobacillus suis H91-0380 0.00 45 45 S1 743972 Actinobacillus suis ATCC 33415 0.01 452917 452726 S 718 Actinobacillus equuli 0.00 191 191 S1 202947 Actinobacillus equuli subsp. equuli 0.00 237210 237210 S 720 Actinobacillus lignieresii 0.05 4438823 538616 G 745 Pasteurella 0.03 3123749 2240076 S 747 Pasteurella multocida 0.01 768429 143816 S1 44283 Pasteurella multocida subsp. multocida 0.01 576571 576571 S2 1304873 Pasteurella multocida subsp. multocida OH4807 0.00 23628 23628 S2 1132496 Pasteurella multocida subsp. multocida str. HN06 0.00 10048 10048 S2 1455592 Pasteurella multocida subsp. multocida PMTB2.1 0.00 6927 6927 S2 1331042 Pasteurella multocida subsp. multocida P1062 0.00 3959 3959 S2 584721 Pasteurella multocida subsp. multocida str. 3480 0.00 1479 1479 S2 1436299 Pasteurella multocida subsp. multocida str. HN07 0.00 1153 1153 S2 272843 Pasteurella multocida subsp. multocida str. Pm70 0.00 644 644 S2 1147130 Pasteurella multocida subsp. multocida str. HB03 0.00 204 204 S2 1339255 Pasteurella multocida subsp. multocida HB01 0.00 49000 49000 S1 115545 Pasteurella multocida subsp. septica 0.00 34628 34587 S1 123812 Pasteurella multocida subsp. gallicida 0.00 26 26 S2 1169409 Pasteurella multocida subsp. gallicida P1059 0.00 15 15 S2 1169410 Pasteurella multocida subsp. gallicida X73 0.00 29413 29413 S1 1304890 Pasteurella multocida OH1905 0.00 2203 2203 S1 1075089 Pasteurella multocida 36950 0.01 644385 644385 S 97481 Pasteurella skyensis 0.00 131507 131507 S 754 Pasteurella dagmatis 0.00 566 566 S 760 Pasteurella stomatis 0.03 3071488 104059 G 416916 Aggregatibacter 0.01 1269958 997953 S 732 Aggregatibacter aphrophilus 0.00 168077 168077 S1 634176 Aggregatibacter aphrophilus NJ8700 0.00 103928 103928 S1 985008 Aggregatibacter aphrophilus ATCC 33389 0.01 1186652 1155126 S 714 Aggregatibacter actinomycetemcomitans 0.00 27371 27371 S1 272556 Aggregatibacter actinomycetemcomitans HK1651 0.00 4155 4155 S1 694569 Aggregatibacter actinomycetemcomitans D7S-1 0.01 510819 0 S 739 Aggregatibacter segnis 0.01 510819 510819 S1 888057 Aggregatibacter segnis ATCC 33393 0.03 2332621 20191 G 2094023 Glaesserella 0.02 1659466 1559192 S 738 Glaesserella parasuis 0.00 68684 68684 S1 1275971 Glaesserella parasuis D74 0.00 16481 16481 S1 557723 Glaesserella parasuis SH0165 0.00 15030 15030 S1 456298 Glaesserella parasuis 29755 0.00 79 79 S1 1117322 Glaesserella parasuis str. Nagasaki 0.01 652964 0 G1 2629322 unclassified Glaesserella 0.01 652964 652964 S 2030797 Glaesserella sp. 15-184 0.02 1493645 324 F1 67757 unclassified Pasteurellaceae 0.01 696162 696162 S 1823760 Pasteurellaceae bacterium RH1A 0.01 628520 628520 S 1524976 Pasteurellaceae bacterium Orientalotternb1 0.00 168639 168639 S 1679001 Pasteurellaceae bacterium NI1060 0.01 1329359 57331 G 292486 Avibacterium 0.01 692099 692099 S 728 Avibacterium paragallinarum 0.01 579929 579929 S 762 Avibacterium volantium 0.01 1022684 0 G 214906 Histophilus 0.01 1022684 809879 S 731 Histophilus somni 0.00 107804 107804 S1 228400 Histophilus somni 2336 0.00 105001 105001 S1 205914 Histophilus somni 129PT 0.01 943872 0 G 476528 Bibersteinia 0.01 943872 714275 S 47735 Bibersteinia trehalosi 0.00 178444 178444 S1 1263832 Bibersteinia trehalosi USDA-ARS-USMARC-190 0.00 41648 41648 S1 1263829 Bibersteinia trehalosi USDA-ARS-USMARC-188 0.00 5942 5942 S1 1263831 Bibersteinia trehalosi USDA-ARS-USMARC-189 0.00 3563 3563 S1 1171377 Bibersteinia trehalosi USDA-ARS-USMARC-192 0.01 856395 11883 G 1960084 Rodentibacter 0.01 654079 654079 S 758 Rodentibacter pneumotropicus 0.00 190433 190433 S 1906744 Rodentibacter heylii 0.01 815148 515674 G 697331 Basfia 0.00 159060 0 S 157673 [Mannheimia] succiniciproducens 0.00 159060 159060 S1 221988 [Mannheimia] succiniciproducens MBEL55E 0.00 140414 140414 S 653940 Basfia succiniciproducens 0.01 766215 0 G 155493 Gallibacterium 0.01 766215 0 S 750 Gallibacterium anatis 0.01 766215 766215 S1 1005058 Gallibacterium anatis UMN179 0.01 652904 0 F1 1524964 Pasteurellaceae incertae sedis 0.01 652904 0 F2 310966 [Pasteurella] aerogenes-[Pasteurella] mairii-[Actinobacillus] rossii complex 0.01 652904 652904 S 749 [Pasteurella] aerogenes 0.01 603220 0 G 109471 Bisgaardia 0.01 603220 603220 S 109472 Bisgaardia hudsonensis 0.01 586559 0 G 1249016 Otariodibacter 0.01 586559 586559 S 1032623 Otariodibacter oris 0.01 567382 0 G 1649317 Frederiksenia 0.01 567382 567382 S 123824 Frederiksenia canicola 0.01 528059 0 G 1520333 Vespertiliibacter 0.01 528059 528059 S 1443036 Vespertiliibacter pulmonis 0.44 39592066 59 O 135624 Aeromonadales 0.43 38623430 53771 F 84642 Aeromonadaceae 0.37 33382748 8149890 G 642 Aeromonas 0.08 7344843 6886535 S 654 Aeromonas veronii 0.00 245727 245727 S1 1347420 Aeromonas veronii Hm21 0.00 212581 212581 S1 998088 Aeromonas veronii B565 0.05 4654441 3377715 S 644 Aeromonas hydrophila 0.00 448432 448432 S1 1354302 Aeromonas hydrophila 4AK4 0.00 438903 248407 S1 196023 Aeromonas hydrophila subsp. hydrophila 0.00 190496 190496 S2 380703 Aeromonas hydrophila subsp. hydrophila ATCC 7966 0.00 364774 364774 S1 1448139 Aeromonas hydrophila YL17 0.00 23441 23441 S1 1416915 Aeromonas hydrophila NJ-35 0.00 559 559 S1 1419584 Aeromonas hydrophila J-1 0.00 251 251 S1 1288394 Aeromonas hydrophila ML09-119 0.00 206 206 S1 1418107 Aeromonas hydrophila pc104A 0.00 160 160 S1 1418110 Aeromonas hydrophila AL09-71 0.04 3165079 160187 G1 257493 unclassified Aeromonas 0.01 889157 889157 S 2033032 Aeromonas sp. CA23 0.01 811867 811867 S 2033033 Aeromonas sp. CU5 0.00 302861 302861 S 1636609 Aeromonas sp. ASNIH4 0.00 220543 220543 S 2560028 Aeromonas sp. 1805 0.00 179674 179674 S 2560029 Aeromonas sp. 2692-1 0.00 134957 134957 S 1636607 Aeromonas sp. ASNIH2 0.00 131550 131550 S 1636606 Aeromonas sp. ASNIH1 0.00 118542 118542 S 1758179 Aeromonas sp. ASNIH5 0.00 73808 73808 S 1920107 Aeromonas sp. ASNIH7 0.00 65823 65823 S 2675707 Aeromonas sp. WP2-W18-CRE-05 0.00 51994 51994 S 1636608 Aeromonas sp. ASNIH3 0.00 24076 24076 S 1675689 Aeromonas sp. Ne-1 0.00 27 27 S 2127034 Aeromonas sp. pRIVM0001_VIM-1 0.00 13 13 S 1622273 Aeromonas sp. C3 0.03 2703367 2246560 S 645 Aeromonas salmonicida 0.00 265570 0 S1 96473 Aeromonas salmonicida subsp. pectinolytica 0.00 265570 265570 S2 1324960 Aeromonas salmonicida subsp. pectinolytica 34mel 0.00 171553 166622 S1 29491 Aeromonas salmonicida subsp. salmonicida 0.00 4809 4809 S2 382245 Aeromonas salmonicida subsp. salmonicida A449 0.00 122 122 S2 1076135 Aeromonas salmonicida subsp. salmonicida 01-B526 0.00 18800 18800 S1 197700 Aeromonas salmonicida subsp. masoucida 0.00 884 884 S1 80745 Aeromonas salmonicida subsp. smithia 0.02 2094975 1989966 S 651 Aeromonas media 0.00 105009 105009 S1 1208104 Aeromonas media WS 0.02 1696532 1696532 S 648 Aeromonas caviae 0.02 1455837 1455837 S 652 Aeromonas schubertii 0.01 943880 943880 S 73010 Aeromonas encheleia 0.01 504886 504886 S 650 Aeromonas jandaei 0.00 392920 392539 S 196024 Aeromonas dhakensis 0.00 381 381 S1 1156800 Aeromonas dhakensis AAK1 0.00 264943 264943 S 948519 Aeromonas rivipollensis 0.00 9345 9345 S 646 Aeromonas sobria 0.00 1122 1122 S 633417 Aeromonas taiwanensis 0.00 653 653 S 29489 Aeromonas enteropelogenes 0.00 35 35 S 105751 Aeromonas bestiarum 0.02 1954372 11373 G 225143 Oceanisphaera 0.01 1060371 1060371 S 1416627 Oceanisphaera profunda 0.01 882628 882628 S 1903694 Oceanisphaera avium 0.01 1183221 0 G 347533 Zobellella 0.01 1183221 1183221 S 347534 Zobellella denitrificans 0.01 1032440 0 G 43947 Tolumonas 0.01 1032440 0 S 43948 Tolumonas auensis 0.01 1032440 1032440 S1 595494 Tolumonas auensis DSM 9187 0.01 1016878 0 G 129577 Oceanimonas 0.01 1016878 0 G1 2636315 unclassified Oceanimonas 0.01 1016878 1016878 S 511062 Oceanimonas sp. GK1 0.01 968577 0 F 83763 Succinivibrionaceae 0.01 968577 0 G 83770 Succinivibrio 0.01 968577 968577 S 83771 Succinivibrio dextrinosolvens 0.36 32904440 1245 O 118969 Legionellales 0.32 28896933 194047 F 444 Legionellaceae 0.29 26493346 742558 G 445 Legionella 0.06 5636998 4601018 S 446 Legionella pneumophila 0.01 493528 493528 S1 91890 Legionella pneumophila subsp. pascullei 0.00 334742 314897 S1 91891 Legionella pneumophila subsp. pneumophila 0.00 17865 17865 S2 1312904 Legionella pneumophila subsp. pneumophila LPE509 0.00 1924 1924 S2 1199191 Legionella pneumophila subsp. pneumophila str. Thunder Bay 0.00 56 56 S2 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 0.00 140591 140591 S1 91892 Legionella pneumophila subsp. fraseri 0.00 32505 0 S1 66976 Legionella pneumophila serogroup 1 0.00 32505 32505 S2 423212 Legionella pneumophila 2300/99 Alcoy 0.00 32090 32090 S1 400673 Legionella pneumophila str. Corby 0.00 2352 2352 S1 297245 Legionella pneumophila str. Lens 0.00 150 150 S1 297246 Legionella pneumophila str. Paris 0.00 22 0 S1 66987 Legionella pneumophila serogroup 12 0.00 22 22 S2 933093 Legionella pneumophila subsp. pneumophila ATCC 43290 0.03 3146543 5770 G1 2622702 unclassified Legionella 0.01 1114001 1114001 S 2755562 Legionella sp. PC997 0.01 1040024 1040024 S 2746060 Legionella sp. PC1000 0.01 986748 986748 S 2708020 Legionella sp. TUM19329 0.02 2050172 2050172 S 28087 Legionella sainthelensi 0.02 1407423 1407423 S 454 Legionella israelensis 0.02 1398035 1385324 S 450 Legionella longbeachae 0.00 12711 12711 S1 661367 Legionella longbeachae NSW150 0.01 1320356 0 S 96230 Legionella fallonii 0.01 1320356 1320356 S1 1212491 Legionella fallonii LLAP-10 0.01 1294004 1294004 S 452 Legionella spiritensis 0.01 1085197 1085197 S 28084 Legionella cherrii 0.01 1056881 1056881 S 28082 Legionella anisa 0.01 1054098 1054098 S 66969 Legionella waltersii 0.01 1033738 1033738 S 449 Legionella hackeliae 0.01 953761 953761 S 1867846 Legionella clemsonensis 0.01 933458 933458 S 456 Legionella jordanis 0.01 927164 927164 S 45065 Legionella geestiana 0.01 897480 897480 S 45067 Legionella lansingensis 0.01 821619 0 S 29423 Legionella oakridgensis 0.01 821619 821619 S1 1268635 Legionella oakridgensis ATCC 33761 = DSM 21215 0.01 629444 629444 S 45056 Legionella adelaidensis 0.00 104417 104417 S 2005262 Legionella endosymbiont of Polyplax serrata 0.01 1147582 0 G 461 Fluoribacter 0.01 1147582 1008302 S 463 Fluoribacter dumoffii 0.00 77140 77140 S1 1094714 Fluoribacter dumoffii Tex-KL 0.00 62140 62140 S1 1094715 Fluoribacter dumoffii NY 23 0.01 1061958 0 G 465 Tatlockia 0.01 1061958 1061958 S 451 Tatlockia micdadei 0.04 3994896 193065 F 118968 Coxiellaceae 0.02 1671041 697 G 776 Coxiella 0.01 828442 749508 S 777 Coxiella burnetii 0.00 52635 52635 S1 434922 Coxiella burnetii Dugway 5J108-111 0.00 12253 12253 S1 1321945 Coxiella burnetii str. Namibia 0.00 7864 7864 S1 1293501 Coxiella burnetii Z3055 0.00 4925 4925 S1 1401251 Coxiella burnetii str. Schperling 0.00 720 720 S1 434923 Coxiella burnetii CbuG_Q212 0.00 201 201 S1 360116 Coxiella burnetii 'MSU Goat Q177' 0.00 156 156 S1 434924 Coxiella burnetii CbuK_Q154 0.00 114 114 S1 227377 Coxiella burnetii RSA 493 0.00 66 66 S1 360115 Coxiella burnetii RSA 331 0.01 651551 651551 S 2054173 Candidatus Coxiella mudrowiae 0.00 190351 2 G1 2676648 unclassified Coxiella (in: Bacteria) 0.00 187619 187619 S 2487929 Coxiella endosymbiont of Amblyomma sculptum 0.00 2730 2730 S 325775 Coxiella endosymbiont of Amblyomma americanum 0.02 1666308 712 G 254245 Aquicella 0.01 886588 886588 S 254247 Aquicella siphonis 0.01 779008 779008 S 254246 Aquicella lusitana 0.01 461765 0 G 59195 Rickettsiella 0.01 461765 461765 S 676208 Candidatus Rickettsiella viridis 0.00 2717 0 F1 134284 unclassified Coxiellaceae 0.00 2717 2717 S 1987500 Coxiella-like endosymbiont of Amblyomma americanum 0.00 11366 0 O1 1798566 Legionellales incertae sedis 0.00 11366 0 G 2565576 Candidatus Endohaliclona 0.00 11366 11366 S 2565582 Candidatus Endohaliclona renieramycinifaciens 0.30 26975149 918 O 72273 Thiotrichales 0.16 14577854 435634 F 135616 Piscirickettsiaceae 0.05 4845583 5843 G 2039723 Thiomicrorhabdus 0.04 3179663 3931 G1 2636650 unclassified Thiomicrorhabdus 0.01 821084 821084 S 2675053 Thiomicrorhabdus sp. AkT22 0.01 818345 818345 S 2675054 Thiomicrorhabdus sp. aks77 0.01 802501 802501 S 2739063 Thiomicrorhabdus sp. G2 0.01 733802 733802 S 2580412 Thiomicrorhabdus sp. G1 0.01 871310 871310 S 2267253 Thiomicrorhabdus indica 0.01 788767 788767 S 2211106 Thiomicrorhabdus aquaedulcis 0.03 2587516 6667 G 28884 Hydrogenovibrio 0.02 1421921 750946 S 39765 Hydrogenovibrio crunogenus 0.01 670975 670975 S1 317025 Hydrogenovibrio crunogenus XCL-2 0.01 771669 771669 S 28885 Hydrogenovibrio marinus 0.00 387259 387259 S 265883 Hydrogenovibrio thermophilus 0.02 1986044 1205 G 40222 Methylophaga 0.01 1160809 1160809 S 754476 Methylophaga nitratireducenticrescens 0.01 823375 823375 S 754477 Methylophaga frappieri 0.00 655 655 S 40223 Methylophaga thalassica 0.02 1952062 0 G 1237 Piscirickettsia 0.02 1952062 1950278 S 1238 Piscirickettsia salmonis 0.00 1784 1784 S1 1227812 Piscirickettsia salmonis LF-89 = ATCC VR-1361 0.02 1653156 7524 G 933 Thiomicrospira 0.01 669692 0 S 92245 Thiomicrospira aerophila 0.01 669692 669692 S1 717772 Thiomicrospira aerophila AL3 0.01 600282 0 S 147268 Thiomicrospira cyclica 0.01 600282 600282 S1 717773 Thiomicrospira cyclica ALM1 0.00 375658 0 G1 2643099 unclassified Thiomicrospira 0.00 375658 375658 S 1803865 Thiomicrospira sp. S5 0.01 1117859 611181 G 34067 Cycloclasticus 0.00 307235 69210 G1 2621467 unclassified Cycloclasticus 0.00 131477 131477 S 728003 Cycloclasticus sp. PY97N 0.00 106548 106548 S 385025 Cycloclasticus sp. P1 0.00 199443 0 S 1329899 Cycloclasticus zancles 0.00 199443 199443 S1 1198232 Cycloclasticus zancles 78-ME 0.11 9554016 25978 F 34064 Francisellaceae 0.09 8278263 1765039 G 262 Francisella 0.01 1032661 472927 S 263 Francisella tularensis 0.01 531615 361984 S1 264 Francisella tularensis subsp. novicida 0.00 64089 64089 S2 1386968 Francisella tularensis subsp. novicida PA10-7858 0.00 40717 40717 S2 984129 Francisella cf. novicida Fx1 0.00 32958 32958 S2 1450527 Francisella tularensis subsp. novicida D9876 0.00 29959 29959 S2 401614 Francisella tularensis subsp. novicida U112 0.00 1908 1908 S2 1452728 Francisella tularensis subsp. novicida F6168 0.00 14735 12607 S1 119856 Francisella tularensis subsp. tularensis 0.00 786 786 S2 1133671 Francisella tularensis subsp. tularensis WY-00W4114 0.00 489 150 S2 1001534 Francisella tularensis subsp. tularensis TI0902 0.00 339 339 S3 1001542 Francisella tularensis subsp. tularensis TIGB03 0.00 485 45 S2 177416 Francisella tularensis subsp. tularensis SCHU S4 0.00 440 440 S3 1341656 Francisella tularensis subsp. tularensis str. SCHU S4 substr. NR-28534 0.00 178 178 S2 543737 Francisella tularensis subsp. tularensis MA00-2987 0.00 122 122 S2 510831 Francisella tularensis subsp. tularensis NE061598 0.00 68 68 S2 393115 Francisella tularensis subsp. tularensis FSC198 0.00 13384 5142 S1 119857 Francisella tularensis subsp. holarctica 0.00 6154 6154 S2 1432652 Francisella tularensis subsp. holarctica PHIT-FT049 0.00 948 948 S2 1232394 Francisella tularensis subsp. holarctica F92 0.00 565 565 S2 393011 Francisella tularensis subsp. holarctica OSU18 0.00 313 313 S2 376619 Francisella tularensis subsp. holarctica LVS 0.00 206 206 S2 351581 Francisella tularensis subsp. holarctica FSC200 0.00 56 56 S2 458234 Francisella tularensis subsp. holarctica FTNF002-00 0.01 994326 880092 S 28110 Francisella philomiragia 0.00 114035 114035 S1 539329 Francisella philomiragia subsp. philomiragia ATCC 25015 0.00 199 199 S1 484022 Francisella philomiragia subsp. philomiragia ATCC 25017 0.01 903445 419 G1 2610885 unclassified Francisella 0.01 570236 570236 S 1547445 Francisella sp. FSC1006 0.00 331844 331844 S 2589986 Francisella sp. Scap27 0.00 946 946 S 475375 Francisella sp. MA067296 0.01 608864 608864 S 573570 Francisella uliginis 0.01 551049 401093 S 622488 Francisella hispaniensis 0.00 149956 149956 S1 1088883 Francisella hispaniensis FSC454 0.01 536487 536487 S 1542390 Francisella frigiditurris 0.01 532980 532980 S 549298 Francisella halioticida 0.00 378570 0 S 954 Francisella persica 0.00 378570 378570 S1 1086726 Francisella persica ATCC VR-331 0.00 356571 356571 S 2007306 Francisella adeliensis 0.00 268699 266507 S 299583 Francisella orientalis 0.00 1853 1853 S1 1163389 Francisella orientalis str. Toba 04 0.00 211 211 S1 1356861 Francisella orientalis LADL--07-285A 0.00 128 128 S1 1449091 Francisella orientalis FNO24 0.00 180319 180319 S 2249302 Francisella marina 0.00 164604 164604 S 573569 Francisella salina 0.00 4649 4649 S 2016517 Francisella opportunistica 0.01 1249775 171834 G 1869285 Allofrancisella 0.00 427600 427600 S 594679 Allofrancisella guangzhouensis 0.00 333567 333567 S 1085647 Allofrancisella inopinata 0.00 316774 316774 S 1085644 Allofrancisella frigidaquae 0.03 2828540 150 F 135617 Thiotrichaceae 0.02 1513951 0 G 40751 Thioploca 0.02 1513951 1513951 S 40754 Thioploca ingrica 0.01 1314439 0 G 1021 Beggiatoa 0.01 1314439 1314439 S 288004 Beggiatoa leptomitoformis 0.00 13821 0 F 2056687 Fastidiosibacteraceae 0.00 13821 0 G 28905 Caedibacter 0.00 13821 13821 S 28907 Caedibacter taeniospiralis 0.23 20530739 83 O 135618 Methylococcales 0.22 19837270 20966 F 403 Methylococcaceae 0.09 8241165 972116 G 416 Methylomonas 0.04 3591571 9252 G1 2608980 unclassified Methylomonas 0.02 1523209 1523209 S 107637 Methylomonas sp. LW13 0.02 1394372 1394372 S 2608981 Methylomonas sp. GJ1 0.01 664738 664738 S 1727196 Methylomonas sp. DH-1 0.02 1528563 0 S 421 Methylomonas methanica 0.02 1528563 1528563 S1 857087 Methylomonas methanica MC09 0.02 1482852 1482852 S 1538553 Methylomonas denitrificans 0.01 666063 666063 S 702114 Methylomonas koyamae 0.05 4893424 744199 G 39773 Methylomicrobium 0.01 1346720 0 S 39775 Methylomicrobium album 0.01 1346720 1346720 S1 686340 Methylomicrobium album BG8 0.01 1246608 0 G1 2631527 unclassified Methylomicrobium 0.01 1246608 1246608 S 2049332 Methylomicrobium sp. wino1 0.01 814700 814700 S 95641 Methylomicrobium buryatense 0.01 741197 0 S 271065 Methylomicrobium alcaliphilum 0.01 741197 741197 S1 1091494 Methylomicrobium alcaliphilum 20Z 0.02 1962893 46987 G 413 Methylococcus 0.01 962355 0 G1 2618889 unclassified Methylococcus 0.01 962355 962355 S 2681310 Methylococcus sp. IM1 0.01 953551 0 S 414 Methylococcus capsulatus 0.01 953551 953551 S1 243233 Methylococcus capsulatus str. Bath 0.02 1786997 0 G 73778 Methylocaldum 0.02 1786997 1786997 S 1432792 Methylocaldum marinum 0.02 1521489 0 G 762296 Methylovulum 0.02 1521489 1521489 S 1704499 Methylovulum psychrotolerans 0.02 1410336 0 G 1808977 Candidatus Methylospira 0.02 1410336 1410336 S 1808979 Candidatus Methylospira mobilis 0.01 693386 0 F 1486721 Methylothermaceae 0.01 693386 0 F1 2749459 Methylothermaceae incertae sedis 0.01 693386 693386 S 417 Methylomonas clara 0.11 10067793 4098 C1 118884 Gammaproteobacteria incertae sedis 0.02 2167215 13137 C2 32036 sulfur-oxidizing symbionts 0.01 734578 734578 S 2360 Bathymodiolus thermophilus thioautotrophic gill symbiont 0.01 684605 18307 G 1541743 Candidatus Ruthia 0.00 339223 339223 S 2738852 Candidatus Ruthia endofausta 0.00 327075 0 S 386487 Candidatus Ruthia magnifica 0.00 327075 327075 S1 413404 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 0.00 439767 0 S 113267 Bathymodiolus septemdierum thioautotrophic gill symbiont 0.00 439767 439767 S1 1303921 endosymbiont of Bathymodiolus septemdierum str. Myojin knoll 0.00 295128 0 G 2732587 Candidatus Vesicomyosocius 0.00 295128 295128 S 412965 Candidatus Vesicomyosocius okutanii 0.02 1612343 3541 G 655184 Candidatus Thioglobus 0.01 643018 491636 S 1427364 Candidatus Thioglobus singularis 0.00 151382 151382 S1 1125411 Candidatus Thioglobus singularis PS1 0.01 507357 0 G1 2644172 unclassified Candidatus Thioglobus 0.01 507357 507357 S 2508687 Candidatus Thioglobus sp. NP1 0.01 458427 458427 S 1705394 Candidatus Thioglobus autotrophicus 0.01 1276533 0 G 745410 Gallaecimonas 0.01 1276533 1276533 S 2291597 Gallaecimonas mangrovi 0.01 1240849 0 G 349742 Sedimenticola 0.01 1240849 1240849 S 1543721 Sedimenticola thiotaurini 0.01 1058594 0 G 1524249 Pseudohongiella 0.01 1058594 1058594 S 1249552 Pseudohongiella spirulinae 0.01 1057819 0 G 2738850 Candidatus Reidiella 0.01 1057819 1057819 S 2738883 Candidatus Reidiella endopervernicosa 0.01 985363 0 G 1608298 Thiolapillus 0.01 985363 985363 S 1076588 Thiolapillus brandeum 0.01 603105 0 C2 198346 Candidatus Baumannia 0.01 603105 403214 S 186490 Candidatus Baumannia cicadellinicola 0.00 199891 199891 S1 374463 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 0.00 61874 234 G 204619 Candidatus Nardonella 0.00 23641 23641 S 1972134 endosymbiont of Sipalinus gigas 0.00 22304 22304 S 1971488 endosymbiont of Pachyrhynchus infernalis 0.00 15695 0 S 1971485 Candidatus Nardonella dryophthoridicola 0.00 15695 15695 S1 1972133 endosymbiont of Rhynchophorus ferrugineus 0.06 5426410 605 C1 33811 unclassified Gammaproteobacteria 0.02 1571291 1571291 S 2169539 Gammaproteobacteria bacterium DM2 0.02 1390579 1390579 S 83406 gamma proteobacterium HdN1 0.01 1108184 1108184 S 947516 gamma proteobacterium SS-5 0.01 766055 766055 S 1248727 endosymbiont of unidentified scaly snail isolate Monju 0.01 514288 514288 S 2070539 Gammaproteobacteria bacterium ESL0073 0.00 55777 55777 S 2652803 endosymbiont of Plagiopylea sp. 0.00 19631 19631 S 650377 endosymbiont of Euscepes postfasciatus 0.04 3572113 93 O 1775403 Nevskiales 0.03 2531723 919 F 568386 Sinobacteraceae 0.02 1593068 0 G 413435 Solimonas 0.02 1593068 0 G1 2637139 unclassified Solimonas 0.02 1593068 1593068 S 2303331 Solimonas sp. K1W22B-7 0.01 937736 0 G 1861863 Sinimarinibacterium 0.01 937736 0 G1 2621506 unclassified Sinimarinibacterium 0.01 937736 937736 S 2698684 Sinimarinibacterium sp. NLF-5-8 0.01 1040297 0 F 2689614 Steroidobacteraceae 0.01 1040297 0 G 469322 Steroidobacter 0.01 1040297 1040297 S 465721 Steroidobacter denitrificans 0.03 3142904 0 O 1240482 Orbales 0.03 3142904 11252 F 1240483 Orbaceae 0.02 1536368 0 G 1193503 Gilliamella 0.02 1536368 1536368 S 1196095 Gilliamella apicola 0.01 818518 0 G 743714 Orbus 0.01 818518 0 G1 2646913 unclassified Orbus 0.01 818518 818518 S 1635327 Orbus sp. IPMB12 0.01 776766 0 G 1335631 Frischella 0.01 776766 776766 S 1267021 Frischella perrara 0.03 3056892 0 O 1692040 Acidiferrobacterales 0.03 3056892 1563 F 1692041 Acidiferrobacteraceae 0.01 1189324 0 G 1692042 Sulfurifustis 0.01 1189324 1189324 S 1675686 Sulfurifustis variabilis 0.01 999662 0 G 986106 Acidiferrobacter 0.01 999662 0 G1 2640868 unclassified Acidiferrobacter 0.01 999662 999662 S 1281578 Acidiferrobacter sp. SPIII_3 0.01 866343 0 G 1744881 Sulfuricaulis 0.01 866343 866343 S 1620215 Sulfuricaulis limicola 0.01 1247379 0 O 742030 Salinisphaerales 0.01 1247379 0 F 742031 Salinisphaeraceae 0.01 1247379 0 G 180541 Salinisphaera 0.01 1247379 0 G1 2649847 unclassified Salinisphaera 0.01 1247379 1247379 S 2183911 Salinisphaera sp. LB1 0.01 1218808 0 O 135615 Cardiobacteriales 0.01 1218808 118 F 868 Cardiobacteriaceae 0.01 789356 0 G 2717 Cardiobacterium 0.01 789356 789356 S 2718 Cardiobacterium hominis 0.00 429334 0 G 869 Dichelobacter 0.00 429334 399357 S 870 Dichelobacter nodosus 0.00 29977 29977 S1 246195 Dichelobacter nodosus VCS1703A 0.01 933130 0 O 1934945 Immundisolibacterales 0.01 933130 0 F 1934946 Immundisolibacteraceae 0.01 933130 0 G 1934947 Immundisolibacter 0.01 933130 933130 S 1810504 Immundisolibacter cernigliae 10.98 991016755 3894903 C 28211 Alphaproteobacteria 5.28 476740947 2665380 O 356 Rhizobiales 1.59 143768906 2302913 F 82115 Rhizobiaceae 1.17 105127584 2583303 F1 227290 Rhizobium/Agrobacterium group 0.79 71521406 11109208 G 379 Rhizobium 0.22 19441515 4280043 G1 2613769 unclassified Rhizobium 0.02 1914155 1914155 S 2048897 Rhizobium sp. NXC24 0.02 1801621 1801621 S 2028343 Rhizobium sp. 11515TR 0.02 1561744 1561744 S 1571470 Rhizobium sp. ACO-34A 0.02 1474055 1474055 S 2603277 Rhizobium sp. WL3 0.01 1266008 1266008 S 1813451 Rhizobium sp. ADMK78 0.01 1204489 1204489 S 1981173 Rhizobium sp. NXC14 0.01 1167501 1167501 S 2020312 Rhizobium sp. CIAT894 0.01 710253 710253 S 1301032 Rhizobium sp. IE4771 0.01 588174 588174 S 1435607 Rhizobium sp. Khangiran2 0.01 575227 575227 S 2020311 Rhizobium sp. Kim5 0.00 422907 422907 S 2582918 Rhizobium sp. JKLM13E 0.00 417443 417443 S 2583231 Rhizobium sp. JKLM12A2 0.00 401448 401448 S 2583232 Rhizobium sp. JKLM19E 0.00 346190 346190 S 2590777 Rhizobium sp. NIBRBAC000502774 0.00 322368 322368 S 2020313 Rhizobium sp. TAL182 0.00 289517 289517 S 136098 Rhizobium sp. TCK 0.00 234394 234394 S 1914541 Rhizobium sp. Y9 0.00 199740 199740 S 1869170 Rhizobium sp. S41 0.00 119545 119545 S 1703969 Rhizobium sp. N324 0.00 92091 92091 S 2364271 Rhizobium sp. CCGE531 0.00 37840 37840 S 2364272 Rhizobium sp. CCGE532 0.00 14109 14109 S 1703960 Rhizobium sp. N113 0.00 224 224 S 1703970 Rhizobium sp. N541 0.00 194 194 S 1125847 Rhizobium sp. NT-26 0.00 118 118 S 1703971 Rhizobium sp. N941 0.00 56 56 S 1703966 Rhizobium sp. N731 0.00 25 25 S 1703961 Rhizobium sp. N1314 0.00 17 17 S 1703968 Rhizobium sp. N871 0.00 10 10 S 1703964 Rhizobium sp. N621 0.00 8 8 S 1703967 Rhizobium sp. N741 0.00 1 1 S 1703962 Rhizobium sp. N1341 0.17 15449604 7421272 S 384 Rhizobium leguminosarum 0.07 5883365 2733813 S1 386 Rhizobium leguminosarum bv. trifolii 0.01 860699 860699 S2 395492 Rhizobium leguminosarum bv. trifolii WSM2304 0.01 834322 834322 S2 395491 Rhizobium leguminosarum bv. trifolii WSM1325 0.01 721899 721899 S2 754523 Rhizobium leguminosarum bv. trifolii WSM1689 0.00 446523 446523 S2 1033991 Rhizobium leguminosarum bv. trifolii CB782 0.00 286109 286109 S2 754521 Rhizobium leguminosarum bv. trifolii TA1 0.02 2144967 1099964 S1 387 Rhizobium leguminosarum bv. viciae 0.01 705125 705125 S2 936136 Rhizobium leguminosarum bv. viciae 248 0.00 339878 339878 S2 216596 Rhizobium leguminosarum bv. viciae 3841 0.04 3509059 1060228 S 29449 Rhizobium etli 0.02 1681790 1681790 S1 538025 Rhizobium etli 8C-3 0.00 389794 0 S1 323733 Rhizobium etli bv. mimosae 0.00 389794 389794 S2 1328306 Rhizobium etli bv. mimosae str. Mim1 0.00 230652 230652 S1 347834 Rhizobium etli CFN 42 0.00 146595 146595 S1 491916 Rhizobium etli CIAT 652 0.03 2495725 2198218 S 396 Rhizobium phaseoli 0.00 297507 297507 S1 526949 Rhizobium phaseoli Brasil 5 0.02 2141778 2141778 S 1312183 Rhizobium jaguaris 0.02 2069794 2069794 S 348824 Rhizobium favelukesii 0.02 1794250 1794250 S 56730 Rhizobium gallicum 0.02 1729468 1729468 S 293958 Rhizobium lusitanum 0.02 1665501 1665501 S 1120045 Rhizobium grahamii 0.02 1566618 1566618 S 648995 Rhizobium pusense 0.02 1500860 0 S 398 Rhizobium tropici 0.02 1500860 1500860 S1 698761 Rhizobium tropici CIAT 899 0.02 1500072 1500072 S 379684 Rhizobium pseudoryzae 0.02 1476872 1476872 S 451876 Rhizobium rhizoryzae 0.01 1246787 1246787 S 240521 Rhizobium daejeonense 0.01 1192281 1192281 S 2267833 Rhizobium oryzihabitans 0.01 917473 917473 S 1538158 Rhizobium acidisoli 0.01 690690 690690 S 1335061 Rhizobium flavum 0.00 23846 0 S 448181 Rhizobium selenitireducens 0.00 23846 23846 S1 1336235 Rhizobium selenitireducens ATCC BAA-1503 0.00 5 5 S 1967781 Rhizobium esperanzae 0.28 24842572 2763040 G 357 Agrobacterium 0.13 11515760 209740 G1 1183400 Agrobacterium tumefaciens complex 0.11 10130902 7905488 S 358 Agrobacterium tumefaciens 0.02 1758524 1758524 S1 311403 Agrobacterium radiobacter K84 0.00 261859 261859 S1 1300225 Agrobacterium tumefaciens WRT31 0.00 204815 204815 S1 1300224 Agrobacterium tumefaciens P4 0.00 216 216 S1 1435057 Agrobacterium tumefaciens LBA4213 (Ach5) 0.01 1152665 904262 S 1176649 Agrobacterium fabrum 0.00 248403 248403 S1 176299 Agrobacterium fabrum str. C58 0.00 15008 15008 S 1183401 Agrobacterium genomosp. 1 0.00 4021 4021 S 1183410 Agrobacterium genomosp. 3 0.00 3424 3424 S 1183411 Agrobacterium genomosp. 6 0.05 4829617 4141945 S 373 Agrobacterium vitis 0.01 687672 687672 S1 311402 Agrobacterium vitis S4 0.03 3084967 993793 G1 2632611 unclassified Agrobacterium 0.01 710929 710929 S 2580515 Agrobacterium sp. T29 0.00 393994 393994 S 2664893 Agrobacterium sp. MA01 0.00 379564 379564 S 2579248 Agrobacterium sp. CGMCC 11546 0.00 375991 375991 S 1842536 Agrobacterium sp. RAC06 0.00 230232 230232 S 861208 Agrobacterium sp. H13-3 0.00 464 464 S 361 Agrobacterium sp. 0.02 1516525 1516525 S 160699 Agrobacterium larrymoorei 0.01 1113881 1113881 S 359 Agrobacterium rhizogenes 0.00 17627 17627 S 1183412 Agrobacterium deltaense 0.00 1155 1155 S 28099 Agrobacterium rubi 0.07 6180303 14544 G 1525371 Neorhizobium 0.03 3091020 557585 S 399 Neorhizobium galegae 0.01 1272463 0 S1 323655 Neorhizobium galegae bv. orientalis 0.01 1272463 1272463 S2 1028800 Neorhizobium galegae bv. orientalis str. HAMBI 540 0.01 1260972 0 S1 323656 Neorhizobium galegae bv. officinalis 0.01 1260972 1260972 S2 1028801 Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 0.03 3074739 2552 G1 2629175 unclassified Neorhizobium 0.02 1768550 1768550 S 1825976 Neorhizobium sp. NCHU2750 0.01 1303637 1303637 S 2060726 Neorhizobium sp. SOG26 0.33 29844783 391705 F1 227292 Sinorhizobium/Ensifer group 0.22 19813302 1841042 G 28105 Sinorhizobium 0.07 6579949 0 G1 663276 Sinorhizobium fredii group 0.07 6579949 2321081 S 380 Sinorhizobium fredii 0.02 1508980 1508980 S1 1185652 Sinorhizobium fredii USDA 257 0.02 1371488 1371488 S1 394 Sinorhizobium fredii NGR234 0.00 405525 405525 S1 1128334 Sinorhizobium fredii CCBAU 83666 0.00 333405 333405 S1 1128331 Sinorhizobium fredii CCBAU 45436 0.00 330943 330943 S1 1117943 Sinorhizobium fredii HH103 0.00 295088 295088 S1 1128330 Sinorhizobium fredii CCBAU 25509 0.00 13439 13439 S1 882101 Sinorhizobium fredii GR64 0.06 5455526 4835376 S 382 Sinorhizobium meliloti 0.00 169164 169164 S1 1235461 Sinorhizobium meliloti GR4 0.00 159766 159766 S1 693982 Sinorhizobium meliloti AK83 0.00 95712 95712 S1 1401243 Sinorhizobium meliloti RU11/001 0.00 76904 76904 S1 1041157 Sinorhizobium meliloti WSM1022 0.00 59433 59433 S1 698936 Sinorhizobium meliloti BL225C 0.00 57045 57045 S1 707241 Sinorhizobium meliloti SM11 0.00 1226 1226 S1 266834 Sinorhizobium meliloti 1021 0.00 807 807 S1 1230587 Sinorhizobium meliloti Rm41 0.00 93 93 S1 1286640 Sinorhizobium meliloti 2011 0.03 2285589 89 G1 2613772 unclassified Sinorhizobium 0.02 1823960 1823960 S 1842534 Sinorhizobium sp. RAC02 0.00 361942 361942 S 794846 Sinorhizobium sp. CCBAU 05631 0.00 99598 99598 S 430451 Sinorhizobium sp. M14 0.02 1906188 1377874 S 194963 Sinorhizobium americanum 0.01 528314 528314 S1 1408224 Sinorhizobium americanum CCGM7 0.02 1745008 0 S 110321 Sinorhizobium medicae 0.02 1745008 1745008 S1 366394 Sinorhizobium medicae WSM419 0.11 9639776 136229 G 106591 Ensifer 0.05 4483175 2338798 S 106592 Ensifer adhaerens 0.02 2144377 2144377 S1 1416753 Ensifer adhaerens OV14 0.02 1998267 1998267 S 375549 Ensifer mexicanus 0.02 1570448 1570448 S 1752398 Ensifer alkalisoli 0.02 1451657 0 S 716925 Ensifer sojae 0.02 1451657 1451657 S1 716928 Ensifer sojae CCBAU 05684 0.02 1896917 0 G 323620 Shinella 0.02 1896917 0 G1 2643062 unclassified Shinella 0.02 1896917 1896917 S 879274 Shinella sp. HZN7 0.02 1826032 9956 G 34019 Liberibacter 0.00 443695 442539 S 1273132 Liberibacter crescens 0.00 1156 1156 S1 1215343 Liberibacter crescens BT-1 0.00 360724 357422 S 34021 Candidatus Liberibacter asiaticus 0.00 1625 1625 S1 1174529 Candidatus Liberibacter asiaticus str. gxpsy 0.00 1242 1242 S1 931202 Candidatus Liberibacter asiaticus str. Ishi-1 0.00 435 435 S1 537021 Candidatus Liberibacter asiaticus str. psy62 0.00 350934 0 S 556287 Candidatus Liberibacter solanacearum 0.00 350934 350934 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 337058 0 S 34020 Candidatus Liberibacter africanus 0.00 337058 337058 S1 1277257 Candidatus Liberibacter africanus PTSAPSY 0.00 323665 0 S 309868 Candidatus Liberibacter americanus 0.00 323665 323665 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.02 1444594 0 G 1648508 Ciceribacter 0.02 1444594 1444594 S 1969821 Ciceribacter thiooxidans 0.01 1285914 0 G 2661800 Georhizobium 0.01 1285914 1285914 S 2341112 Georhizobium profundi 0.00 40169 0 F1 90141 unclassified Rhizobiaceae 0.00 40169 40169 S 97707 arsenite-oxidising bacterium NT-25 1.22 109809981 1214314 F 41294 Bradyrhizobiaceae 0.82 74378814 11428389 G 374 Bradyrhizobium 0.25 22350976 3186751 G1 2631580 unclassified Bradyrhizobium 0.03 2422547 2422547 S 1197460 Bradyrhizobium sp. 6(2017) 0.02 2177997 2177997 S 288000 Bradyrhizobium sp. BTAi1 0.02 2092179 2092179 S 858422 Bradyrhizobium sp. CCBAU 051011 0.02 1945170 1945170 S 2057741 Bradyrhizobium sp. SK17 0.02 1855373 1855373 S 115808 Bradyrhizobium sp. ORS 285 0.02 1814492 1814492 S 114615 Bradyrhizobium sp. ORS 278 0.02 1681344 1681344 S 1223566 Bradyrhizobium sp. CCGE-LA001 0.02 1638758 1638758 S 376 Bradyrhizobium sp. 0.02 1605877 1605877 S 1404888 Bradyrhizobium sp. 1(2017) 0.01 782765 782765 S 319017 Bradyrhizobium sp. WSM471 0.01 594473 594473 S 2493093 Bradyrhizobium sp. LCT2 0.00 221739 221739 S 2599805 Bradyrhizobium sp. SG09 0.00 184604 184604 S 2599819 Bradyrhizobium sp. TM102 0.00 146687 146687 S 1404649 Bradyrhizobium sp. 323S2 0.00 128 128 S 2578113 Bradyrhizobium sp. KBS0725 0.00 92 92 S 2578114 Bradyrhizobium sp. KBS0727 0.08 7176295 7176295 S 1437360 Bradyrhizobium erythrophlei 0.03 2883384 2275719 S 375 Bradyrhizobium japonicum 0.01 583508 583508 S1 476282 Bradyrhizobium japonicum SEMIA 5079 0.00 24157 24157 S1 1037409 Bradyrhizobium japonicum USDA 6 0.03 2368521 2368521 S 722472 Bradyrhizobium lablabi 0.02 2208382 2208382 S 255045 Bradyrhizobium canariense 0.02 2195555 0 S 29448 Bradyrhizobium elkanii 0.02 2195555 2195555 S1 1275962 Bradyrhizobium elkanii USDA 61 0.02 2187877 2187877 S 1404367 Bradyrhizobium symbiodeficiens 0.02 2146267 2146267 S 1274631 Bradyrhizobium icense 0.02 2095198 0 S 44255 Bradyrhizobium oligotrophicum 0.02 2095198 2095198 S1 1245469 Bradyrhizobium oligotrophicum S58 0.02 2027929 2026764 S 1355477 Bradyrhizobium diazoefficiens 0.00 1165 1165 S1 224911 Bradyrhizobium diazoefficiens USDA 110 0.02 2007392 2007392 S 1325107 Bradyrhizobium zhanjiangense 0.02 1901010 1901010 S 1404864 Bradyrhizobium cosmicum 0.02 1887962 1887962 S 190148 Bradyrhizobium paxllaeri 0.02 1771016 1771016 S 1549949 Bradyrhizobium vignae 0.02 1693166 1693166 S 1325090 Bradyrhizobium guangdongense 0.02 1645225 1645225 S 1325095 Bradyrhizobium guangzhouense 0.02 1472268 1472268 S 1325115 Bradyrhizobium guangxiense 0.01 1240043 1240043 S 244734 Bradyrhizobium betae 0.01 1143450 1143450 S 1404768 Bradyrhizobium amphicarpaeae 0.01 548509 548509 S 931866 Bradyrhizobium ottawaense 0.13 12116997 100617 G 85413 Bosea 0.11 10155120 221858 G1 2653178 unclassified Bosea 0.02 1908629 1908629 S 2599640 Bosea sp. F3-2 0.02 1819596 1819596 S 1867715 Bosea sp. Tri-49 0.02 1602567 1602567 S 2015316 Bosea sp. AS-1 0.02 1545956 1545956 S 1792307 Bosea sp. PAMC 26642 0.02 1544294 1544294 S 1842539 Bosea sp. RAC05 0.02 1512220 1512220 S 2020412 Bosea sp. ANAM02 0.02 1861260 1861260 S 1526658 Bosea vaviloviae 0.12 10478109 0 G 1073 Rhodopseudomonas 0.12 10478109 4864863 S 1076 Rhodopseudomonas palustris 0.02 1480731 1480731 S1 316055 Rhodopseudomonas palustris BisA53 0.02 1467286 1467286 S1 316056 Rhodopseudomonas palustris BisB18 0.02 1372503 1372503 S1 316058 Rhodopseudomonas palustris HaA2 0.01 475362 475362 S1 395960 Rhodopseudomonas palustris TIE-1 0.00 422994 422994 S1 652103 Rhodopseudomonas palustris DX-1 0.00 394370 394370 S1 258594 Rhodopseudomonas palustris CGA009 0.04 3823339 10582 G 1395974 Tardiphaga 0.02 1916245 1531867 G1 2631404 unclassified Tardiphaga 0.00 130710 130710 S 2592814 Tardiphaga sp. vice154 0.00 102223 102223 S 2592817 Tardiphaga sp. vice304 0.00 81366 81366 S 2592815 Tardiphaga sp. vice278 0.00 70079 70079 S 2592816 Tardiphaga sp. vice352 0.02 1896512 1896512 S 943830 Tardiphaga robiniae 0.03 2334416 19017 G 911 Nitrobacter 0.02 1385053 0 S 912 Nitrobacter hamburgensis 0.02 1385053 1385053 S1 323097 Nitrobacter hamburgensis X14 0.01 930346 0 S 913 Nitrobacter winogradskyi 0.01 930346 930346 S1 323098 Nitrobacter winogradskyi Nb-255 0.02 1728134 0 G 1033 Afipia 0.02 1728134 0 G1 2642050 unclassified Afipia 0.02 1728134 1728134 S 1882747 Afipia sp. GAS231 0.02 1380667 0 G 1649510 Variibacter 0.02 1380667 1380667 S 1333996 Variibacter gotjawalensis 0.01 1240879 0 F1 81426 unclassified Bradyrhizobiaceae 0.01 1240879 1240879 S 709797 Bradyrhizobiaceae bacterium SG-6C 0.01 1114312 0 G 40136 Oligotropha 0.01 1114312 1093566 S 40137 Oligotropha carboxidovorans 0.00 19853 19853 S1 504832 Oligotropha carboxidovorans OM5 0.00 893 893 S1 1031710 Oligotropha carboxidovorans OM4 0.80 72253965 233491 F 69277 Phyllobacteriaceae 0.60 54283959 9059804 G 68287 Mesorhizobium 0.30 27116581 2319563 G1 325217 unclassified Mesorhizobium 0.02 1900670 1900670 S 2082387 Mesorhizobium sp. Pch-S 0.02 1707119 1707119 S 675281 Mesorhizobium sp. N3 0.02 1650698 1650698 S 2493673 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 0.02 1461755 1461755 S 2493672 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 0.02 1439941 1439941 S 2483404 Mesorhizobium sp. NZP2077 0.02 1438042 1438042 S 2493675 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 0.02 1424647 1424647 S 2493676 Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1 0.02 1368758 1368758 S 2493669 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 0.02 1368601 1368601 S 2493677 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 0.01 1348301 1348301 S 2108445 Mesorhizobium sp. DCY119 0.01 1303901 1303901 S 2584466 Mesorhizobium sp. 8 0.01 1238477 1238477 S 2493668 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 0.01 1198996 1198996 S 2493678 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 0.01 1187975 1187975 S 2483403 Mesorhizobium sp. NZP2298 0.01 1093486 1093486 S 2493681 Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 0.01 993719 993719 S 2493671 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 0.01 889097 889097 S 1854057 Mesorhizobium sp. AA22 0.01 609567 609567 S 2493674 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 0.01 538648 538648 S 2493670 Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 0.00 414726 414726 S 278153 Mesorhizobium sp. WSM1497 0.00 219894 219894 S 2483402 Mesorhizobium sp. NZP2234 0.05 4603728 2954141 S 381 Mesorhizobium loti 0.01 1351031 1351031 S1 935548 Mesorhizobium loti R88b 0.00 298556 298556 S1 935546 Mesorhizobium loti NZP2037 0.02 1745107 0 S 71433 Mesorhizobium amorphae 0.02 1745107 1745107 S1 1082933 Mesorhizobium amorphae CCNWGS0123 0.02 1705391 398386 S 39645 Mesorhizobium ciceri 0.01 783596 783596 S1 682633 Mesorhizobium ciceri ca181 0.01 523409 357129 S1 278148 Mesorhizobium ciceri biovar biserrulae 0.00 166280 166280 S2 765698 Mesorhizobium ciceri biovar biserrulae WSM1271 0.02 1654914 1654914 S 2725666 Mesorhizobium terrae 0.02 1559289 1243515 S 28104 Mesorhizobium huakuii 0.00 315774 315774 S1 763057 Mesorhizobium huakuii 7653R 0.02 1524624 1524624 S 1670800 Mesorhizobium oceanicum 0.02 1446053 872140 S 2066070 Mesorhizobium japonicum 0.01 573913 573913 S1 266835 Mesorhizobium japonicum MAFF 303099 0.01 1330138 0 S 593909 Mesorhizobium opportunistum 0.01 1330138 1330138 S1 536019 Mesorhizobium opportunistum WSM2075 0.01 1289177 0 S 536018 Mesorhizobium australicum 0.01 1289177 1289177 S1 754035 Mesorhizobium australicum WSM2073 0.01 1248939 1248939 S 1777866 Mesorhizobium erdmanii 0.00 214 214 S 1777867 Mesorhizobium jarvisii 0.05 4174050 1356269 G 31988 Aminobacter 0.02 2214338 10602 G1 2644704 unclassified Aminobacter 0.02 1689851 1689851 S 374606 Aminobacter sp. MSH1 0.01 513885 513885 S 2666139 Aminobacter sp. MDW-2 0.01 603443 603443 S 83263 Aminobacter aminovorans 0.03 2877726 6738 G 274591 Hoeflea 0.02 1527399 0 G1 2614931 unclassified Hoeflea 0.02 1527399 1527399 S 1620421 Hoeflea sp. IMCC20628 0.01 1343589 0 S 244596 Hoeflea phototrophica 0.01 1343589 1343589 S1 411684 Hoeflea phototrophica DFL-43 0.03 2830643 0 G 245876 Nitratireductor 0.03 2830643 911 G1 2641084 unclassified Nitratireductor 0.02 1432698 1432698 S 1756988 Nitratireductor sp. OM-1 0.02 1397034 1397034 S 2599600 Nitratireductor sp. SY7 0.02 1873469 0 G 28100 Phyllobacterium 0.02 1873469 1873469 S 1867719 Phyllobacterium zundukense 0.02 1490447 0 G 449972 Chelativorans 0.02 1490447 0 G1 2643807 unclassified Chelativorans 0.02 1490447 1490447 S 266779 Chelativorans sp. BNC1 0.01 1250815 0 G 1649463 Lentilitoribacter 0.01 1250815 0 G1 2647570 unclassified Lentilitoribacter 0.01 1250815 1250815 S 2305987 Lentilitoribacter sp. Alg239-R112 0.01 1181338 0 G 1594166 Oricola 0.01 1181338 0 G1 2649292 unclassified Oricola 0.01 1181338 1181338 S 2742145 Oricola sp. MEBiC13590 0.01 1037440 0 G 2712688 Salaquimonas 0.01 1037440 1037440 S 2712698 Salaquimonas pukyongi 0.01 1020587 0 G 1915401 Roseitalea 0.01 1020587 1020587 S 1852022 Roseitalea porphyridii 0.45 40770959 1214031 F 119045 Methylobacteriaceae 0.30 26755159 3911127 G 407 Methylobacterium 0.11 9828044 1274712 G1 2615210 unclassified Methylobacterium 0.02 1931085 1931085 S 426117 Methylobacterium sp. 4-46 0.02 1566254 1566254 S 2603276 Methylobacterium sp. WL1 0.02 1448623 1448623 S 2202828 Methylobacterium sp. 17Sr1-43 0.01 1351992 1351992 S 2202826 Methylobacterium sp. 17Sr1-1 0.01 957488 957488 S 925818 Methylobacterium sp. AMS5 0.01 693798 693798 S 2067957 Methylobacterium sp. DM1 0.00 369907 369907 S 1479019 Methylobacterium sp. C1 0.00 231512 231512 S 739141 Methylobacterium sp. XJLW 0.00 1807 1807 S 2696058 Methylobacterium sp. NI91 0.00 866 866 S 2696060 Methylobacterium sp. CLZ 0.03 2336966 0 S 114616 Methylobacterium nodulans 0.03 2336966 2336966 S1 460265 Methylobacterium nodulans ORS 2060 0.02 1814366 1814366 S 2202825 Methylobacterium durans 0.02 1700248 1700248 S 270351 Methylobacterium aquaticum 0.02 1660511 0 S 39956 Methylobacterium mesophilicum 0.02 1660511 1660511 S1 908290 Methylobacterium mesophilicum SR1.6/6 0.02 1652554 1652554 S 2051553 Methylobacterium currus 0.02 1494667 1494667 S 269660 Methylobacterium brachiatum 0.01 1293620 1293620 S 2202827 Methylobacterium terrae 0.01 495262 0 S 31998 Methylobacterium radiotolerans 0.01 495262 495262 S1 426355 Methylobacterium radiotolerans JCM 2831 0.00 387642 387642 S 418223 Methylobacterium phyllosphaerae 0.00 180152 0 S 334852 Methylobacterium oryzae 0.00 180152 180152 S1 693986 Methylobacterium oryzae CBMB20 0.09 7720039 1055017 G 2282523 Methylorubrum 0.04 3414467 1137523 S 408 Methylorubrum extorquens 0.01 1319427 1319427 S1 272630 Methylorubrum extorquens AM1 0.01 553875 553875 S1 440085 Methylorubrum extorquens CM4 0.00 403642 403642 S1 419610 Methylorubrum extorquens PA1 0.03 3081836 2481141 S 223967 Methylorubrum populi 0.01 600695 600695 S1 441620 Methylorubrum populi BJ001 0.00 168719 168719 S 29429 Methylorubrum zatmanii 0.06 5081730 15847 G 186650 Microvirga 0.03 2689453 2689453 S 1882682 Microvirga ossetica 0.03 2376430 29599 G1 2617746 unclassified Microvirga 0.01 1277724 1277724 S 2082949 Microvirga sp. 17 mud 1-3 0.01 1069107 1069107 S 2651334 Microvirga sp. HR1 0.26 23438367 68044 F 45401 Hyphomicrobiaceae 0.09 7812286 18764 G 46913 Devosia 0.07 6458143 12620 G1 196773 unclassified Devosia 0.02 1500440 1500440 S 1736675 Devosia sp. A16 0.01 1314534 1314534 S 2664417 Devosia sp. D6-9 0.01 1268024 1268024 S 2499144 Devosia sp. 1566 0.01 1196924 1196924 S 2083786 Devosia sp. I507 0.01 1165601 1165601 S 2759954 Devosia sp. MC521 0.01 1335379 1335379 S 400770 Devosia ginsengisoli 0.05 4838525 9599 G 81 Hyphomicrobium 0.02 2248251 20061 S 53399 Hyphomicrobium denitrificans 0.01 1153917 1153917 S1 670307 Hyphomicrobium denitrificans 1NES1 0.01 1074273 1074273 S1 582899 Hyphomicrobium denitrificans ATCC 51888 0.02 1463915 0 G1 2619925 unclassified Hyphomicrobium 0.02 1463915 1463915 S 717785 Hyphomicrobium sp. MC1 0.01 1116760 0 S 1427356 Hyphomicrobium nitrativorans 0.01 1116760 1116760 S1 1029756 Hyphomicrobium nitrativorans NL23 0.03 2482587 0 G 29407 Rhodoplanes 0.03 2466152 0 G1 2619116 unclassified Rhodoplanes 0.03 2466152 2466152 S 674703 Rhodoplanes sp. Z2-YC6860 0.00 16435 16435 S 444923 Rhodoplanes piscinae 0.02 2109975 24538 G 59282 Blastochloris 0.01 1063665 1063665 S 2233851 Blastochloris tepida 0.01 1021772 1021772 S 1079 Blastochloris viridis 0.01 1285663 0 G 1827478 Youhaiella 0.01 1285663 1285663 S 1447062 Youhaiella tibetensis 0.01 1257034 0 G 119044 Filomicrobium 0.01 1257034 1257034 S 1608628 Candidatus Filomicrobium marinum 0.01 1207498 0 G 1082930 Pelagibacterium 0.01 1207498 1206201 S 531813 Pelagibacterium halotolerans 0.00 1297 1297 S1 1082931 Pelagibacterium halotolerans B2 0.01 1196690 0 G 1068 Rhodomicrobium 0.01 1196690 0 S 1069 Rhodomicrobium vannielii 0.01 1196690 1196690 S1 648757 Rhodomicrobium vannielii ATCC 17100 0.01 1180065 0 G 623276 Maritalea 0.01 1180065 1180065 S 454601 Maritalea myrionectae 0.16 13986616 99740 F 335928 Xanthobacteraceae 0.03 3090239 11955 G 152053 Starkeya 0.02 1800480 0 G1 2615126 unclassified Starkeya 0.02 1800480 1800480 S 2709380 Starkeya sp. ORNL1 0.01 1277804 1217 S 921 Starkeya novella 0.01 1276587 1276587 S1 639283 Starkeya novella DSM 506 0.03 2965478 6234 G 556257 Pseudolabrys 0.02 1641965 1641965 S 331696 Pseudolabrys taiwanensis 0.01 1317279 0 G1 2638514 unclassified Pseudolabrys 0.01 1317279 1317279 S 2562284 Pseudolabrys sp. FHR47 0.03 2414032 9047 G 99 Ancylobacter 0.02 1371216 1371216 S 1745854 Ancylobacter pratisalsi 0.01 1033769 0 G1 2626613 unclassified Ancylobacter 0.01 1033769 1033769 S 1850374 Ancylobacter sp. TS-1 0.03 2262094 0 G 204476 Labrys 0.03 2262094 2262094 S 376174 Labrys neptuniae 0.02 1593193 34 G 279 Xanthobacter 0.02 1592100 0 S 280 Xanthobacter autotrophicus 0.02 1592100 1592100 S1 78245 Xanthobacter autotrophicus Py2 0.00 1059 1059 S 281 Xanthobacter flavus 0.02 1561840 0 G 6 Azorhizobium 0.02 1561840 0 S 7 Azorhizobium caulinodans 0.02 1561840 1561840 S1 438753 Azorhizobium caulinodans ORS 571 0.14 12522082 0 F 772 Bartonellaceae 0.14 12522082 987803 G 773 Bartonella 0.03 2502563 791358 G1 2645622 unclassified Bartonella 0.01 1101645 1101645 S 2759660 Bartonella sp. HY038 0.00 355940 355940 S 1933904 Bartonella sp. WD16.2 0.00 221762 221762 S 515256 Bartonella sp. 1-1C 0.00 10087 10087 S 1933910 Bartonella sp. A1379B 0.00 6315 6315 S 1933905 Bartonella sp. CDC_skunk 0.00 5851 5851 S 1933912 Bartonella sp. Raccoon60 0.00 5651 5651 S 596995 Bartonella sp. TT0105 0.00 1134 1134 S 1933909 Bartonella sp. 114 0.00 1009 1009 S 1933908 Bartonella sp. 11B 0.00 688 688 S 1933906 Bartonella sp. JB15 0.00 605 605 S 1933911 Bartonella sp. Coyote22sub2 0.00 518 518 S 1933907 Bartonella sp. JB63 0.02 1922403 1922403 S 1686310 Bartonella apis 0.01 838147 491205 S 33047 Bartonella vinsonii 0.00 346942 0 S1 40933 Bartonella vinsonii subsp. berkhoffii 0.00 346942 346942 S2 1094497 Bartonella vinsonii subsp. berkhoffii str. Winnie 0.01 568224 530378 S 803 Bartonella quintana 0.00 27371 27371 S1 1225179 Bartonella quintana RM-11 0.00 10475 10475 S1 283165 Bartonella quintana str. Toulouse 0.01 559706 558601 S 38323 Bartonella henselae 0.00 1105 1105 S1 283166 Bartonella henselae str. Houston-1 0.01 511364 739 S 33045 Bartonella grahamii 0.01 510625 510625 S1 634504 Bartonella grahamii as4aup 0.01 464708 0 S 388640 Bartonella australis 0.01 464708 464708 S1 1094489 Bartonella australis Aust/NH1 0.01 459649 0 S 111504 Bartonella birtlesii 0.01 459649 459649 S1 1095900 Bartonella birtlesii IBS 325 0.00 444839 444839 S 2267275 Bartonella krasnovii 0.00 424599 424599 S 52764 Bartonella alsatica 0.00 424175 424175 S 1318743 Bartonella ancashensis 0.00 421240 416945 S 85701 Bartonella tribocorum 0.00 4295 4295 S1 382640 Bartonella tribocorum CIP 105476 0.00 400816 400806 S 774 Bartonella bacilliformis 0.00 10 10 S1 360095 Bartonella bacilliformis KC583 0.00 358253 0 S 155194 Bartonella bovis 0.00 358253 358253 S1 1094491 Bartonella bovis 91-4 0.00 353099 0 S 165694 Bartonella schoenbuchensis 0.00 353099 353099 S1 687861 Bartonella schoenbuchensis R1 0.00 326366 0 S 56426 Bartonella clarridgeiae 0.00 326366 326366 S1 696125 Bartonella clarridgeiae 73 0.00 298645 298645 S 807 Bartonella elizabethae 0.00 255483 255483 S 2133959 Bartonella kosoyi 0.12 10957260 21389 F 31993 Methylocystaceae 0.08 6969031 231194 G 133 Methylocystis 0.02 1719433 1719433 S 173366 Methylocystis rosea 0.02 1411736 1411736 S 391905 Methylocystis heyeri 0.02 1400143 1400143 S 655015 Methylocystis bryophila 0.01 1316602 1316602 S 134 Methylocystis parvus 0.01 889923 0 G1 2625913 unclassified Methylocystis 0.01 889923 889923 S 187303 Methylocystis sp. SC2 0.03 2766139 28915 G 425 Methylosinus 0.02 1415533 0 S 426 Methylosinus trichosporium 0.02 1415533 1415533 S1 595536 Methylosinus trichosporium OB3b 0.01 1321691 0 G1 2624500 unclassified Methylosinus 0.01 1321691 1321691 S 2699395 Methylosinus sp. C49 0.01 1200701 0 G 196080 Terasakiella 0.01 1200701 0 G1 2614952 unclassified Terasakiella 0.01 1200701 1200701 S 2560057 Terasakiella sp. SH-1 0.12 10596032 68176 F 118882 Brucellaceae 0.08 7476315 908321 G 528 Ochrobactrum 0.02 2053622 1894263 S 529 Ochrobactrum anthropi 0.00 159359 159359 S1 439375 Ochrobactrum anthropi ATCC 49188 0.02 1637580 1637580 S 271865 Ochrobactrum quorumnocens 0.01 1277305 1277305 S 94625 Ochrobactrum intermedium 0.01 852295 852295 S 571256 Ochrobactrum pituitosum 0.01 747192 747192 S 419475 Ochrobactrum pseudogrignonense 0.03 3051541 1336794 G 234 Brucella 0.01 1269330 284465 G1 2632610 unclassified Brucella 0.00 201365 201365 S 1844051 Brucella sp. 09RB8910 0.00 185117 185117 S 1149953 Brucella sp. 10RB9215 0.00 181156 181156 S 2592625 Brucella sp. 2280 0.00 162308 162308 S 2769351 Brucella sp. 6810 0.00 130275 130275 S 2691913 Brucella sp. BO3 0.00 124519 124519 S 1149952 Brucella sp. 09RB8471 0.00 125 125 S 1891098 Brucella sp. 2002734562 0.00 136459 136459 S 1218315 Brucella inopinata 0.00 106626 99609 S 29459 Brucella melitensis 0.00 2202 0 S1 644337 Brucella melitensis bv. 1 0.00 2202 2202 S2 224914 Brucella melitensis bv. 1 str. 16M 0.00 1700 0 S1 644340 Brucella melitensis bv. 3 0.00 1700 1700 S2 520466 Brucella melitensis bv. 3 str. Ether 0.00 1644 1644 S1 1029825 Brucella melitensis NI 0.00 743 87 S1 941967 Brucella melitensis M28 0.00 656 656 S2 703352 Brucella melitensis M5-90 0.00 728 323 S1 645169 Brucella melitensis bv. 2 0.00 399 399 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.00 6 6 S2 546272 Brucella melitensis ATCC 23457 0.00 57959 21980 S 29461 Brucella suis 0.00 30104 28526 S1 645170 Brucella suis bv. 2 0.00 1578 1578 S2 470137 Brucella suis ATCC 23445 0.00 5431 0 S1 1567496 Brucella suis bv. 3 0.00 5431 5431 S2 520487 Brucella suis bv. 3 str. 686 0.00 221 221 S1 1112912 Brucella suis VBI22 0.00 137 137 S1 1171378 Brucella suis 019 0.00 86 86 S1 204722 Brucella suis 1330 0.00 48203 44271 S 235 Brucella abortus 0.00 2053 2053 S1 1210454 Brucella abortus 104M 0.00 429 429 S1 1104320 Brucella abortus A13334 0.00 414 0 S1 644332 Brucella abortus bv. 2 0.00 414 414 S2 520450 Brucella abortus bv. 2 str. 86/8/59 0.00 373 0 S1 35802 Brucella abortus bv. 1 0.00 373 373 S2 262698 Brucella abortus bv. 1 str. 9-941 0.00 205 0 S1 1567505 Brucella abortus bv. 9 0.00 205 205 S2 520455 Brucella abortus bv. 9 str. C68 0.00 203 203 S1 359391 Brucella abortus 2308 0.00 116 116 S1 430066 Brucella abortus S19 0.00 73 0 S1 1567504 Brucella abortus bv. 6 0.00 73 73 S2 520454 Brucella abortus bv. 6 str. 870 0.00 66 66 S1 1198700 Brucella abortus RB51-AHVLA 0.00 37337 0 S 236 Brucella ovis 0.00 37337 37337 S1 444178 Brucella ovis ATCC 25840 0.00 26594 16758 S 120577 Brucella ceti 0.00 8830 8830 S1 1407053 Brucella ceti TE28753-12 0.00 1006 1006 S1 1423891 Brucella ceti TE10759-12 0.00 13501 0 S 444163 Brucella microti 0.00 13501 13501 S1 568815 Brucella microti CCM 4915 0.00 11582 5915 S 120576 Brucella pinnipedialis 0.00 5667 5667 S1 520461 Brucella pinnipedialis B2/94 0.00 7156 5993 S 36855 Brucella canis 0.00 646 646 S1 1408887 Brucella canis str. Oliveri 0.00 512 512 S1 1104321 Brucella canis HSK A52141 0.00 5 5 S1 483179 Brucella canis ATCC 23365 0.10 8838803 2602 O1 119042 Rhizobiales incertae sedis 0.02 2183205 0 G 169055 Nordella 0.02 2183205 0 G1 2623691 unclassified Nordella 0.02 2183205 2183205 S 2712222 Nordella sp. HKS 07 0.02 1923028 121507 G 1484898 Methyloceanibacter 0.01 935542 935542 S 1384459 Methyloceanibacter caenitepidi 0.01 865979 0 G1 2617503 unclassified Methyloceanibacter 0.01 865979 865979 S 2170729 Methyloceanibacter sp. wino2 0.02 1815076 0 G 1734920 Pseudorhodoplanes 0.02 1815076 1815076 S 1235591 Pseudorhodoplanes sinuspersici 0.02 1616646 0 G 1572860 Hartmannibacter 0.02 1616646 1616646 S 1482074 Hartmannibacter diazotrophicus 0.01 973396 0 G 1485594 Methyloligella 0.01 973396 0 G1 2625955 unclassified Methyloligella 0.01 973396 973396 S 2742204 Methyloligella sp. GL2 0.00 324850 0 G 573657 Candidatus Hodgkinia 0.00 324850 324850 S 573658 Candidatus Hodgkinia cicadicola 0.10 8632265 958 F 255475 Aurantimonadaceae 0.07 6091946 182695 G 293088 Martelella 0.03 3052018 1678194 G1 2629616 unclassified Martelella 0.02 1370210 1370210 S 686597 Martelella sp. AD-3 0.00 1954 1954 S 2740297 Martelella sp. NC18 0.00 1660 1660 S 2740298 Martelella sp. NC20 0.02 1491307 0 S 293089 Martelella mediterranea 0.02 1491307 1491307 S1 1122214 Martelella mediterranea DSM 17316 0.02 1365926 1365926 S 1486262 Martelella endophytica 0.03 2539361 610 G 414371 Aureimonas 0.03 2537360 5205 G1 2615206 unclassified Aureimonas 0.02 1515051 1515051 S 1349819 Aureimonas sp. AU20 0.01 1013185 1013185 S 2758041 Aureimonas sp. LMG 31693 0.00 3058 3058 S 1638161 Aureimonas sp. AU12 0.00 382 382 S 1637747 Aureimonas sp. AU40 0.00 249 249 S 1638165 Aureimonas sp. N4 0.00 230 230 S 1638164 Aureimonas sp. D3 0.00 1391 0 S 401562 Aureimonas ureilytica 0.00 1391 1391 S1 1121028 Aureimonas ureilytica DSM 18598 = NBRC 106430 0.08 7221482 6968 F 45404 Beijerinckiaceae 0.03 2603711 6195 G 120652 Methylocella 0.01 1318449 1318449 S 227605 Methylocella tundrae 0.01 1279067 0 S 199596 Methylocella silvestris 0.01 1279067 1279067 S1 395965 Methylocella silvestris BL2 0.02 2254448 92 F1 45405 unclassified Beijerinckiaceae 0.01 1222123 1222123 S 2572036 Beijerinckiaceae bacterium RH AL1 0.01 1032233 1032233 S 1978229 Beijerinckiaceae bacterium 0.02 1369505 0 G 532 Beijerinckia 0.02 1369505 0 S 533 Beijerinckia indica 0.02 1369505 0 S1 31994 Beijerinckia indica subsp. indica 0.02 1369505 1369505 S2 395963 Beijerinckia indica subsp. indica ATCC 9039 0.01 986850 0 G 1156568 Methylovirgula 0.01 986850 986850 S 569860 Methylovirgula ligni 0.05 4463805 5717 F 119043 Rhodobiaceae 0.01 1233149 0 F1 1712260 unclassified Rhodobiaceae 0.01 1233149 1233149 S 2026785 Rhodobiaceae bacterium 0.01 1135598 0 G 256616 Parvibaculum 0.01 1135598 0 S 256618 Parvibaculum lavamentivorans 0.01 1135598 1135598 S1 402881 Parvibaculum lavamentivorans DS-1 0.01 1077257 0 G 1541445 Candidatus Phaeomarinobacter 0.01 1077257 1077257 S 1458461 Candidatus Phaeomarinobacter ectocarpi 0.01 1012084 0 G 1742974 Pyruvatibacter 0.01 1012084 1012084 S 1712261 Pyruvatibacter mobilis 0.03 3029728 130 F 655351 Cohaesibacteraceae 0.02 1545362 0 G 655352 Cohaesibacter 0.02 1545362 0 G1 2631913 unclassified Cohaesibacter 0.02 1545362 1545362 S 1798205 Cohaesibacter sp. ES.047 0.02 1484236 0 G 1406135 Breoghania 0.02 1484236 0 G1 2624130 unclassified Breoghania 0.02 1484236 1484236 S 2304600 Breoghania sp. L-A4 0.03 2316822 0 F 2036754 Chelatococcaceae 0.03 2316822 318696 G 28209 Chelatococcus 0.01 1150771 0 G1 2638111 unclassified Chelatococcus 0.01 1150771 1150771 S 1702325 Chelatococcus sp. CO-6 0.01 847355 847355 S 444444 Chelatococcus daeguensis 0.02 1468494 0 F 2723775 Lichenihabitantaceae 0.02 1468494 0 G 2723776 Lichenihabitans 0.02 1468494 1468494 S 2528642 Lichenihabitans psoromatis 1.98 178424123 13342 O 204455 Rhodobacterales 1.88 169931126 3044790 F 31989 Rhodobacteraceae 0.21 18581939 1267512 G 265 Paracoccus 0.05 4160150 8903 G1 246570 unclassified Paracoccus 0.01 1142906 1142906 S 1529068 Paracoccus sp. BM15 0.01 1067516 1067516 S 2500532 Paracoccus sp. Arc7-R13 0.01 1020503 1020503 S 2589076 Paracoccus sp. AK26 0.01 920322 920322 S 2259340 Paracoccus sp. SC2-6 0.02 1731231 1731231 S 147645 Paracoccus yeei 0.02 1426157 0 S 34003 Paracoccus aminophilus 0.02 1426157 1426157 S1 1367847 Paracoccus aminophilus JCM 7686 0.01 1314299 1314299 S 2560053 Paracoccus liaowanqingii 0.01 1262384 1262384 S 1077935 Paracoccus zhejiangensis 0.01 1257975 1257975 S 82367 Paracoccus pantotrophus 0.01 1174883 1174883 S 135740 Paracoccus kondratievae 0.01 1168182 1167577 S 266 Paracoccus denitrificans 0.00 605 605 S1 318586 Paracoccus denitrificans PD1222 0.01 977510 977510 S 34004 Paracoccus aminovorans 0.01 901411 901411 S 2065379 Paracoccus jeotgali 0.01 830342 830342 S 1545044 Paracoccus sanguinis 0.01 783498 783498 S 1945662 Paracoccus contaminans 0.00 283286 283286 S 1499308 Paracoccus mutanolyticus 0.00 25064 25064 S 59779 Paracoccus marcusii 0.00 9557 9557 S 453842 Paracoccus aestuarii 0.00 4992 4992 S 135742 Paracoccus methylutens 0.00 3506 3506 S 225362 Paracoccus haeundaensis 0.15 13260307 627577 G 60136 Sulfitobacter 0.10 9217545 81051 G1 196795 unclassified Sulfitobacter 0.02 1600540 1600540 S 1389005 Sulfitobacter sp. SK012 0.01 1307067 1307067 S 2070369 Sulfitobacter sp. JL08 0.01 1288279 1288279 S 1389004 Sulfitobacter sp. SK011 0.01 1236223 1236223 S 1917485 Sulfitobacter sp. AM1-D1 0.01 1132931 1132931 S 2587855 Sulfitobacter sp. THAF37 0.01 1116474 1116474 S 1968541 Sulfitobacter sp. D7 0.01 897266 897266 S 664426 Sulfitobacter sp. BSw21498 0.01 554501 554501 S 1389011 Sulfitobacter sp. SK025 0.00 3213 3213 S 1179815 Sulfitobacter sp. DFL14 0.03 2845361 2845361 S 1402135 Sulfitobacter pseudonitzschiae 0.01 513801 513801 S 60137 Sulfitobacter pontiacus 0.00 56023 56023 S 74349 Sulfitobacter guttiformis 0.13 11603662 1586342 G 478070 Labrenzia 0.09 7836419 1217541 G1 2648686 unclassified Labrenzia 0.02 1972588 1972588 S 2587861 Labrenzia sp. THAF82 0.02 1924116 1924116 S 2590016 Labrenzia sp. PHM005 0.02 1800360 1800360 S 2021862 Labrenzia sp. VG12 0.01 510118 510118 S 2587854 Labrenzia sp. THAF35 0.00 411637 411637 S 1674922 Labrenzia sp. CP4 0.00 35 35 S 2587864 Labrenzia sp. THAF187b 0.00 19 19 S 2587866 Labrenzia sp. THAF191a 0.00 5 5 S 2587867 Labrenzia sp. THAF191b 0.02 1664243 0 S 388408 Labrenzia alexandrii 0.02 1664243 1664243 S1 244592 Labrenzia alexandrii DFL-11 0.01 516658 516658 S 187304 Labrenzia aggregata 0.11 9857324 1572360 G 302485 Phaeobacter 0.03 3135927 3135774 S 221822 Phaeobacter inhibens 0.00 129 129 S1 383629 Phaeobacter inhibens 2.10 0.00 24 24 S1 391619 Phaeobacter inhibens DSM 17395 0.03 2439853 2439733 S 60890 Phaeobacter gallaeciensis 0.00 120 120 S1 1423144 Phaeobacter gallaeciensis DSM 26640 0.02 1460463 1460463 S 1580596 Phaeobacter piscinae 0.01 956922 956922 S 1844006 Phaeobacter porticola 0.00 291799 0 G1 2621772 unclassified Phaeobacter 0.00 291799 291799 S 681157 Phaeobacter sp. LSS9 0.11 9699443 5471 F1 58840 unclassified Rhodobacteraceae 0.03 2732831 2732831 S 1904441 Rhodobacteraceae bacterium 0.01 1268533 1268533 S 2748098 Rhodobacteraceae bacterium RR4-56 0.01 1226001 1226001 S 2683284 Rhodobacteraceae bacterium 9Alg 56 0.01 1176781 1176781 S 2605946 Rhodobacteraceae bacterium SH-1 0.01 1172300 1172300 S 2745590 Rhodobacteraceae bacterium SC52 0.01 1092783 1092783 S 2171755 Rhodobacteraceae bacterium BAR1 0.01 1024743 1024743 S 2033435 Rhodobacteraceae bacterium QY30 0.09 8450594 77272 G 1060 Rhodobacter 0.05 4148771 3389767 S 1063 Rhodobacter sphaeroides 0.00 364848 364848 S1 557760 Rhodobacter sphaeroides KD131 0.00 208779 208779 S1 349101 Rhodobacter sphaeroides ATCC 17029 0.00 184174 184174 S1 992186 Rhodobacter sphaeroides WS8N 0.00 1203 1203 S1 272943 Rhodobacter sphaeroides 2.4.1 0.02 2108855 638 G1 196779 unclassified Rhodobacter 0.01 1182882 1182882 S 2033869 Rhodobacter sp. CZR27 0.01 925335 925335 S 1850250 Rhodobacter sp. LPB0142 0.01 1067107 0 S 1061 Rhodobacter capsulatus 0.01 1067107 1067107 S1 272942 Rhodobacter capsulatus SB 1003 0.01 1048589 1048589 S 1075 Rhodobacter blasticus 0.08 7415058 896190 G 74030 Roseovarius 0.05 4393819 904365 G1 2614913 unclassified Roseovarius 0.01 1159614 1159614 S 2494550 Roseovarius sp. MME-070 0.01 1152778 1152778 S 2587847 Roseovarius sp. THAF9 0.00 409377 409377 S 2587846 Roseovarius sp. THAF8 0.00 402152 402152 S 2587850 Roseovarius sp. THAF27 0.00 365533 0 S 391613 Roseovarius sp. TM1035 0.00 365533 365533 S1 2203213 Roseovarius sp. AK1035 0.02 1717408 1717408 S 540747 Roseovarius indicus 0.00 407641 407641 S 215743 Roseovarius mucosus 0.07 5866718 29034 G 875170 Celeribacter 0.01 1299006 1299006 S 1208324 Celeribacter indicus 0.01 1284434 1284434 S 875171 Celeribacter baekdonensis 0.01 1167622 1167622 S 1758178 Celeribacter ethanolicus 0.01 1125316 1125316 S 1411902 Celeribacter manganoxidans 0.01 961306 961306 S 1397108 Celeribacter marinus 0.06 5151264 3670 G 97050 Ruegeria 0.04 3835236 162333 G1 2625375 unclassified Ruegeria 0.01 1223218 1223218 S 2587853 Ruegeria sp. THAF33 0.01 1200500 1200500 S 292414 Ruegeria sp. TM1040 0.01 1191613 1191613 S 2293862 Ruegeria sp. AD91A 0.00 57572 57572 S 185588 Ruegeria sp. PR1b 0.01 1312358 0 S 89184 Ruegeria pomeroyi 0.01 1312358 1312358 S1 246200 Ruegeria pomeroyi DSS-3 0.05 4861959 48710 G 53945 Octadecabacter 0.02 1367341 0 S 1217908 Octadecabacter antarcticus 0.02 1367341 1367341 S1 391626 Octadecabacter antarcticus 307 0.02 1365662 0 S 53946 Octadecabacter arcticus 0.02 1365662 1365662 S1 391616 Octadecabacter arcticus 238 0.01 1051885 0 G1 196158 unclassified Octadecabacter 0.01 1051885 1051885 S 2602067 Octadecabacter sp. SW4 0.01 1028361 1028361 S 1458307 Octadecabacter temperatus 0.05 4407476 152928 G 191028 Leisingera 0.02 1860591 795777 G1 2614906 unclassified Leisingera 0.01 550391 550391 S 2508306 Leisingera sp. NJS201 0.01 514423 514423 S 2508307 Leisingera sp. NJS204 0.01 1225770 0 S 133924 Leisingera methylohalidivorans 0.01 1225770 1225770 S1 999552 Leisingera methylohalidivorans DSM 14336 0.01 1168187 1168187 S 1396826 Leisingera aquaemixtae 0.04 4026660 224381 G 34008 Rhodovulum 0.02 2213386 1518 G1 2631432 unclassified Rhodovulum 0.01 1271404 1271404 S 1564506 Rhodovulum sp. P5 0.01 940464 940464 S 308754 Rhodovulum sp. MB263 0.02 1588893 1569625 S 35806 Rhodovulum sulfidophilum 0.00 19268 19268 S1 1188256 Rhodovulum sulfidophilum DSM 1374 0.04 3874148 129735 G 2433 Roseobacter 0.01 1327596 0 S 42443 Roseobacter litoralis 0.01 1327596 1327596 S1 391595 Roseobacter litoralis Och 149 0.01 1213619 1213619 S 1891787 Roseobacter ponti 0.01 1203198 1196812 S 2434 Roseobacter denitrificans 0.00 6386 6386 S1 375451 Roseobacter denitrificans OCh 114 0.03 2994024 43324 G 354203 Yangia 0.02 1527811 0 G1 2645800 unclassified Yangia 0.02 1527811 1527811 S 1792508 Yangia sp. CCB-MM3 0.02 1422889 1422889 S 311180 Yangia pacifica 0.03 2841296 6870 G 152161 Stappia 0.02 1460218 1460218 S 538381 Stappia indica 0.02 1374208 0 G1 2629676 unclassified Stappia 0.02 1374208 1374208 S 1881061 Stappia sp. ES.058 0.03 2721002 0 G 227873 Pannonibacter 0.03 2721002 2207630 S 121719 Pannonibacter phragmitetus 0.01 513372 513372 S1 1402210 Pannonibacter phragmitetus BB 0.03 2417786 0 G 93682 Roseivivax 0.03 2417786 1131978 G1 2639302 unclassified Roseivivax 0.01 1104850 1104850 S 2587852 Roseivivax sp. THAF30 0.00 99328 99328 S 2588299 Roseivivax sp. THAF197b 0.00 81630 81630 S 2587858 Roseivivax sp. THAF40 0.02 2162551 0 G 1649279 Epibacterium 0.02 2162551 1337067 S 379347 Epibacterium mobile 0.01 825484 825484 S1 1265309 Epibacterium mobile F1926 0.02 1873966 0 G 258255 Pseudovibrio 0.02 1873966 0 G1 2627060 unclassified Pseudovibrio 0.02 1873966 1873966 S 911045 Pseudovibrio sp. FO-BEG1 0.02 1794642 9139 G 92944 Ketogulonicigenium 0.01 981684 976370 S 92945 Ketogulonicigenium vulgare 0.00 4693 4693 S1 880591 Ketogulonicigenium vulgare Y25 0.00 621 621 S1 759362 Ketogulonicigenium vulgare WSH-001 0.01 803819 803819 S 92947 Ketogulonicigenium robustum 0.02 1651804 0 G 1434019 Mameliella 0.02 1651804 1651804 S 561184 Mameliella alba 0.02 1576424 0 G 74032 Antarctobacter 0.02 1576424 1576424 S 74033 Antarctobacter heliothermus 0.02 1551426 0 G 2738399 Parasedimentitalea 0.02 1551426 1551426 S 2483033 Parasedimentitalea marina 0.02 1530284 0 G 436357 Thalassococcus 0.02 1530284 0 G1 2633072 unclassified Thalassococcus 0.02 1530284 1530284 S 2017482 Thalassococcus sp. S3 0.02 1515847 0 G 58842 Sagittula 0.02 1515847 0 G1 2624628 unclassified Sagittula 0.02 1515847 1515847 S 2009329 Sagittula sp. P11 0.02 1470135 0 G 2683599 Paraoceanicella 0.02 1470135 1470135 S 2579971 Paraoceanicella profunda 0.02 1430124 0 G 367771 Marinovum 0.02 1430124 0 S 42444 Marinovum algicola 0.02 1430124 1430124 S1 988812 Marinovum algicola DG 898 0.02 1415777 0 G 263377 Salipiger 0.02 1415777 1415777 S 1229727 Salipiger profundus 0.02 1397253 0 G 360528 Pelagibaca 0.02 1397253 1397253 S 1250539 Pelagibaca abyssi 0.02 1359044 0 G 188905 Jannaschia 0.02 1359044 0 G1 2645469 unclassified Jannaschia 0.02 1359044 1359044 S 290400 Jannaschia sp. CCS1 0.01 1351774 0 G 1579315 Halocynthiibacter 0.01 1351774 1351774 S 1579316 Halocynthiibacter arcticus 0.01 1338169 0 G 1759417 Pseudohalocynthiibacter 0.01 1338169 1338169 S 1591409 Pseudohalocynthiibacter aestuariivivens 0.01 1335751 0 G 1097466 Defluviimonas 0.01 1335751 1335751 S 1335048 Defluviimonas alba 0.01 1310312 0 G 1443919 Tabrizicola 0.01 1310312 1310312 S 2494374 Tabrizicola piscis 0.01 1304664 0 G 299261 Tateyamaria 0.01 1304664 1304664 S 299262 Tateyamaria omphalii 0.01 1298131 0 G 1955420 Silicimonas 0.01 1298131 1298131 S 1826607 Silicimonas algicola 0.01 1269055 0 G 238783 Pseudorhodobacter 0.01 1269055 0 G1 2644082 unclassified Pseudorhodobacter 0.01 1269055 1269055 S 2500533 Pseudorhodobacter sp. S12M18 0.01 1222219 0 G 309512 Dinoroseobacter 0.01 1222219 0 S 215813 Dinoroseobacter shibae 0.01 1222219 1222219 S1 398580 Dinoroseobacter shibae DFL 12 = DSM 16493 0.01 1216264 0 G 285107 Thioclava 0.01 1216264 1216264 S 1915078 Thioclava nitratireducens 0.01 1212741 0 G 366614 Haematobacter 0.01 1212741 1212741 S 195105 Haematobacter massiliensis 0.01 1209486 0 G 252301 Oceanicola 0.01 1209486 0 G1 2628660 unclassified Oceanicola 0.01 1209486 1209486 S 2587163 Oceanicola sp. D3 0.01 1208002 0 G 204456 Gemmobacter 0.01 1208002 0 G1 2636157 unclassified Gemmobacter 0.01 1208002 1208002 S 2169400 Gemmobacter sp. HYN0069 0.01 1201939 0 G 335927 Thalassobius 0.01 1201939 1201939 S 53501 Thalassobius gelatinovorus 0.01 1198283 0 G 947567 Litoreibacter 0.01 1198283 0 G1 2620315 unclassified Litoreibacter 0.01 1198283 1198283 S 2599296 Litoreibacter sp. LN3S51 0.01 1196058 0 G 119541 Rhodobaca 0.01 1196058 1196058 S 441209 Rhodobaca barguzinensis 0.01 1162522 0 G 1648497 Boseongicola 0.01 1162522 0 G1 2634418 unclassified Boseongicola 0.01 1162522 1162522 S 2552942 Boseongicola sp. CCM32 0.01 1140543 0 G 2211641 Yoonia 0.01 1140543 1140543 S 245188 Yoonia vestfoldensis 0.01 1102883 0 G 1609958 Confluentimicrobium 0.01 1102883 0 G1 2643318 unclassified Confluentimicrobium 0.01 1102883 1102883 S 1609966 Confluentimicrobium sp. EMB200-NS6 0.01 1038964 0 G 2029873 Monaibacterium 0.01 1038964 0 G1 2637785 unclassified Monaibacterium 0.01 1038964 1038964 S 2715211 Monaibacterium sp. ALG8 0.01 1033110 0 G 1284657 Planktomarina 0.01 1033110 0 S 1284658 Planktomarina temperata 0.01 1033110 1033110 S1 666509 Planktomarina temperata RCA23 0.01 1027502 0 G 159345 Roseibacterium 0.01 1027502 0 S 159346 Roseibacterium elongatum 0.01 1027502 1027502 S1 1294273 Roseibacterium elongatum DSM 19469 0.01 1001356 0 G 387095 Maribius 0.01 1001356 0 G1 2639808 unclassified Maribius 0.01 1001356 1001356 S 2587842 Maribius sp. THAF1 0.01 937912 0 G 1855413 Brevirhabdus 0.01 937912 937912 S 1267768 Brevirhabdus pacifica 0.01 808759 0 G 1759396 Marivivens 0.01 808759 0 G1 2622455 unclassified Marivivens 0.01 808759 808759 S 1920883 Marivivens sp. JLT3646 0.09 8479655 2703 F 69657 Hyphomonadaceae 0.04 3521425 39811 G 85 Hyphomonas 0.03 2369734 357 G1 2630699 unclassified Hyphomonas 0.01 1225142 1225142 S 1873716 Hyphomonas sp. CACIAM 19H1 0.01 1144235 1144235 S 1906738 Hyphomonas sp. Mor2 0.01 1111880 0 S 81032 Hyphomonas neptunium 0.01 1111880 1111880 S1 228405 Hyphomonas neptunium ATCC 15444 0.02 1859120 0 G 2004661 Hyphobacterium 0.02 1859120 0 G1 2638931 unclassified Hyphobacterium 0.02 1859120 1859120 S 2749086 Hyphobacterium sp. CCMP332 0.01 1130534 0 G 2723 Hirschia 0.01 1130534 0 S 2724 Hirschia baltica 0.01 1130534 1130534 S1 582402 Hirschia baltica ATCC 49814 0.01 1039267 0 G 74317 Maricaulis 0.01 1039267 0 S 74318 Maricaulis maris 0.01 1039267 1039267 S1 394221 Maricaulis maris MCS10 0.01 926606 0 G 1433402 Glycocaulis 0.01 926606 926606 S 1434191 Glycocaulis alkaliphilus 1.75 157529402 810694 O 204457 Sphingomonadales 1.40 126703319 1821732 F 41297 Sphingomonadaceae 0.55 49944357 1173117 G 13687 Sphingomonas 0.33 29748726 293820 G1 196159 unclassified Sphingomonas 0.02 1517247 1517247 S 2735134 Sphingomonas sp. AP4-R1 0.02 1459380 1459380 S 304378 Sphingomonas sp. IC081 0.02 1435733 1435733 S 1327635 Sphingomonas sp. Cra20 0.01 1254806 1254806 S 2711156 Sphingomonas sp. MK52 0.01 1238493 1238493 S 2319844 Sphingomonas sp. YZ-8 0.01 1227103 1227103 S 2681549 Sphingomonas sp. LMO-1 0.01 1222155 1222155 S 2653203 Sphingomonas sp. CL5.1 0.01 1216085 1216085 S 2492837 Sphingomonas sp. C8-2 0.01 1208548 1208548 S 1523415 Sphingomonas sp. AAP5 0.01 1184532 1184532 S 2599297 Sphingomonas sp. XS-10 0.01 1176583 1176583 S 1030157 Sphingomonas sp. KC8 0.01 1170887 1170887 S 2565555 Sphingomonas sp. PAMC26645 0.01 1155729 1155729 S 1938607 Sphingomonas sp. LM7 0.01 1101202 1101202 S 745310 Sphingomonas sp. MM-1 0.01 1047724 1047724 S 1517554 Sphingomonas sp. HMP9 0.01 1042545 1042545 S 1390395 Sphingomonas sp. LK11 0.01 1025135 1025135 S 1517551 Sphingomonas sp. HMP6 0.01 973292 973292 S 1813879 Sphingomonas sp. HKS19 0.01 958645 958645 S 2219696 Sphingomonas sp. FARSPH 0.01 923177 923177 S 2596913 Sphingomonas sp. NBWT7 0.01 905568 905568 S 2698828 Sphingomonas sp. CSW-10 0.01 818164 818164 S 2714943 Sphingomonas sp. HDW15B 0.01 807261 807261 S 2698679 Sphingomonas sp. C33 0.01 728617 728617 S 2764186 Sphingomonas sp. sand1-3 0.01 705631 705631 S 2714942 Sphingomonas sp. HDW15A 0.01 657184 657184 S 2594473 Sphingomonas sp. AE3 0.01 603118 603118 S 2714944 Sphingomonas sp. HDW15C 0.01 588652 588652 S 1961362 Sphingomonas sp. NIC1 0.00 65211 65211 S 1628059 Sphingomonas sp. JE1 0.00 30461 30461 S 1381597 Sphingomonas sp. ERG5 0.00 3181 3181 S 849864 Sphingomonas sp. SH 0.00 2857 2857 S 90322 Sphingomonas sp. A1 0.03 2955205 2955205 S 653931 Sphingomonas alpina 0.02 1741410 0 S 397260 Sphingomonas sanxanigenens 0.02 1741410 1741410 S1 1123269 Sphingomonas sanxanigenens DSM 19645 = NX02 0.02 1501007 1501007 S 1560345 Sphingomonas panacis 0.02 1451845 1451845 S 1609977 Sphingomonas hengshuiensis 0.01 1283618 1283618 S 93064 Sphingomonas koreensis 0.01 1249393 0 S 160791 Sphingomonas wittichii 0.01 1249393 1249393 S1 392499 Sphingomonas wittichii RW1 0.01 1156775 1156775 S 13689 Sphingomonas paucimobilis 0.01 1052328 1052328 S 1549858 Sphingomonas taxi 0.01 1016271 1016271 S 424800 Sphingomonas insulae 0.01 893130 893130 S 1176646 Sphingomonas daechungensis 0.01 871432 871432 S 363835 Sphingomonas ginsengisoli An et al. 2013 0.01 826812 826812 S 386874 Sphingomonas sediminicola 0.01 795100 618070 S 152682 Sphingomonas melonis 0.00 177030 177030 S1 621456 Sphingomonas melonis TY 0.01 784701 784701 S 941907 Sphingomonas indica 0.01 741057 741057 S 2071607 Sphingomonas rhizophila 0.01 702195 702195 S 1045317 Sphingomonas lutea 0.00 127 127 S 59803 Sphingomonas echinoides 0.00 108 108 S 330920 Sphingomonas azotifigens 0.29 26114617 3949156 G 165695 Sphingobium 0.12 11117159 328461 G1 2611147 unclassified Sphingobium 0.02 1394510 1394510 S 1315974 Sphingobium sp. TKS 0.02 1382832 1382832 S 2082188 Sphingobium sp. YG1 0.01 1349423 1349423 S 2072936 Sphingobium sp. SCG-1 0.01 1223163 1223163 S 627192 Sphingobium sp. SYK-6 0.01 1174432 1174432 S 1843368 Sphingobium sp. RAC03 0.01 1162724 1162724 S 1855519 Sphingobium sp. EP60837 0.01 1070846 1070846 S 2676077 Sphingobium sp. CAP-1 0.01 951506 951506 S 407020 Sphingobium sp. MI1205 0.00 358394 358394 S 2565554 Sphingobium sp. PAMC28499 0.00 357583 357583 S 484429 Sphingobium sp. YBL2 0.00 275578 275578 S 520734 Sphingobium sp. RSMS 0.00 87707 87707 S 2185111 Sphingobium sp. LF-16 0.04 3531382 3531382 S 13690 Sphingobium yanoikuyae 0.01 1105140 1105140 S 1332080 Sphingobium baderi 0.01 1075132 0 S 46429 Sphingobium chlorophenolicum 0.01 1075132 1075132 S1 690566 Sphingobium chlorophenolicum L-1 0.01 1064958 1064958 S 1673076 Sphingobium hydrophobicum 0.01 1026932 1026932 S 135719 Sphingobium amiense 0.01 979011 979011 S 120107 Sphingobium cloacae 0.01 971699 971699 S 76947 Sphingobium herbicidovorans 0.01 496225 0 S 332056 Sphingobium japonicum 0.01 496225 496225 S1 452662 Sphingobium japonicum UT26S 0.00 414808 0 S 336203 Sphingobium fuliginis 0.00 414808 414808 S1 1208342 Sphingobium fuliginis ATCC 27551 0.00 364769 0 S 332055 Sphingobium indicum 0.00 364769 364769 S1 861109 Sphingobium indicum B90A 0.00 13571 13571 S 56193 Sphingobium chungbukense 0.00 3341 3341 S 595605 Sphingobium wenxiniae 0.00 1334 0 S 121428 Sphingobium xenophagum 0.00 1334 1334 S1 1192759 Sphingobium xenophagum QYY 0.17 15025202 1477935 G 165697 Sphingopyxis 0.08 7483234 132557 G1 2614943 unclassified Sphingopyxis 0.01 1218966 1218966 S 292913 Sphingopyxis sp. 113P3 0.01 1197966 1197966 S 2486273 Sphingopyxis sp. OPL5 0.01 1053688 1053688 S 2565556 Sphingopyxis sp. PAMC25046 0.01 1025854 1025854 S 1357916 Sphingopyxis sp. QXT-31 0.01 908090 908090 S 1874061 Sphingopyxis sp. EG6 0.01 877369 877369 S 1914525 Sphingopyxis sp. FD7 0.01 798234 798234 S 1913578 Sphingopyxis sp. LPB0140 0.00 270510 270510 S 1866325 Sphingopyxis sp. MG 0.03 2369205 2369205 S 33050 Sphingopyxis macrogoltabida 0.01 1269396 1269396 S 1515612 Sphingopyxis fribergensis 0.01 1063914 1063914 S 2054227 Sphingopyxis lindanitolerans 0.01 773686 0 S 117207 Sphingopyxis alaskensis 0.01 773686 773686 S1 317655 Sphingopyxis alaskensis RB2256 0.01 587832 587832 S 267128 Sphingopyxis granuli 0.15 13564789 535790 G 165696 Novosphingobium 0.08 6768588 9869 G1 2644732 unclassified Novosphingobium 0.02 1926835 1926835 S 1609758 Novosphingobium sp. P6W 0.01 1334899 1334899 S 1016987 Novosphingobium sp. THN1 0.01 1265861 1265861 S 2571749 Novosphingobium sp. ABRDHK2 0.01 1115419 1115419 S 2675225 Novosphingobium sp. Gsoil 351 0.01 1074016 1074016 S 702113 Novosphingobium sp. PP1Y 0.00 41689 41689 S 164608 Novosphingobium sp. KA1 0.02 1895996 1895996 S 158500 Novosphingobium resinovorum 0.01 1244889 0 S 169176 Novosphingobium tardaugens 0.01 1244889 1244889 S1 1219035 Novosphingobium tardaugens NBRC 16725 0.01 1176591 33987 S 48935 Novosphingobium aromaticivorans 0.01 1142604 1142604 S1 279238 Novosphingobium aromaticivorans DSM 12444 0.01 1030669 0 S 205844 Novosphingobium pentaromativorans 0.01 1030669 1030669 S1 1088721 Novosphingobium pentaromativorans US6-1 0.01 912266 912266 S 1176536 Novosphingobium ginsenosidimutans 0.06 5334689 756 G 1434046 Sphingorhabdus 0.05 4252480 105025 G1 2614947 unclassified Sphingorhabdus 0.01 1155918 1155918 S 2077182 Sphingorhabdus sp. YGSMI21 0.01 1023080 1023080 S 2725558 Sphingorhabdus sp. JK6 0.01 992137 992137 S 2584094 Sphingorhabdus sp. SMR4y 0.01 976320 976320 S 1806885 Sphingorhabdus sp. M41 0.01 1081453 1081453 S 392610 Sphingorhabdus lacus 0.03 3022495 165 G 335405 Sphingosinicella 0.02 1819030 0 G1 2644549 unclassified Sphingosinicella 0.02 1819030 1819030 S 1892855 Sphingosinicella sp. BN140058 0.01 1203300 1203300 S 335406 Sphingosinicella microcystinivorans 0.02 2009042 6073 G 1234545 Parasphingopyxis 0.01 1088734 1088734 S 2026624 Parasphingopyxis algicola 0.01 914235 0 G1 2621071 unclassified Parasphingopyxis 0.01 914235 914235 S 2724527 Parasphingopyxis sp. CP4 0.02 1955872 0 G 541 Zymomonas 0.02 1955872 676318 S 542 Zymomonas mobilis 0.01 662359 295543 S1 120045 Zymomonas mobilis subsp. mobilis 0.00 213479 213479 S2 627344 Zymomonas mobilis subsp. mobilis ATCC 29191 0.00 76878 76878 S2 622759 Zymomonas mobilis subsp. mobilis NCIMB 11163 0.00 74676 74676 S2 555217 Zymomonas mobilis subsp. mobilis ATCC 10988 0.00 1327 1327 S2 627343 Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 0.00 440 440 S2 264203 Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 0.00 16 16 S2 1194424 Zymomonas mobilis subsp. mobilis NRRL B-12526 0.01 617195 0 S1 120044 Zymomonas mobilis subsp. pomaceae 0.01 617195 617195 S2 579138 Zymomonas mobilis subsp. pomaceae ATCC 29192 0.02 1708616 764156 G 150203 Blastomonas 0.01 528266 0 G1 2626550 unclassified Blastomonas 0.01 528266 528266 S 1842535 Blastomonas sp. RAC04 0.00 416194 416194 S 1550728 Blastomonas fulva 0.02 1360168 0 G 1649486 Rhizorhabdus 0.02 1360168 1360168 S 1850238 Rhizorhabdus dicambivorans 0.01 1084323 0 G 2676233 Sphingosinithalassobacter 0.01 1084323 0 G1 2676235 unclassified Sphingosinithalassobacter 0.01 1084323 1084323 S 2711215 Sphingosinithalassobacter sp. zrk23 0.01 979865 0 G 2685927 Tardibacter 0.01 979865 979865 S 1921510 Tardibacter chloracetimidivorans 0.01 959241 0 G 56358 Sandaracinobacter 0.01 959241 0 G1 2634456 unclassified Sandaracinobacter 0.01 959241 959241 S 2759707 Sandaracinobacter sp. M6 0.01 914914 0 G 72173 Citromicrobium 0.01 914914 0 G1 2630544 unclassified Citromicrobium 0.01 914914 914914 S 1634516 Citromicrobium sp. JL477 0.01 903397 0 G 2709686 Novosphingopyxis 0.01 903397 0 G1 2709689 unclassified Novosphingopyxis 0.01 903397 903397 S 2762729 Novosphingopyxis sp. pb63 0.33 30015389 312418 F 335929 Erythrobacteraceae 0.13 11357931 102069 G 1041 Erythrobacter 0.04 3539721 6903 G1 2633097 unclassified Erythrobacter 0.01 998879 998879 S 2011159 Erythrobacter sp. KY5 0.01 940602 940602 S 2587851 Erythrobacter sp. THAF29 0.01 818123 818123 S 1798193 Erythrobacter sp. HL-111 0.01 775214 775214 S 2502843 Erythrobacter sp. HKB08 0.02 1738068 896988 S 39960 Erythrobacter litoralis 0.01 841080 841080 S1 314225 Erythrobacter litoralis HTCC2594 0.02 1488494 1488494 S 192812 Erythrobacter flavus 0.01 987911 987911 S 2182384 Erythrobacter aureus 0.01 956248 956248 S 1648404 Erythrobacter atlanticus 0.01 881060 881060 S 2739433 Erythrobacter mangrovi 0.01 854980 854980 S 266951 Erythrobacter seohaensis 0.01 809380 809380 S 502682 Erythrobacter gangjinensis 0.11 10298177 40945 G 361177 Altererythrobacter 0.05 4380350 5352 G1 2614945 unclassified Altererythrobacter 0.01 1084526 1084526 S 2060312 Altererythrobacter sp. B11 0.01 883477 883477 S 2604537 Altererythrobacter sp. BO-6 0.01 871854 871854 S 2185142 Altererythrobacter sp. ZODW24 0.01 783073 783073 S 2338327 Altererythrobacter sp. NS1 0.01 752068 752068 S 2067415 Altererythrobacter sp. TH136 0.01 992945 992945 S 1267766 Altererythrobacter atlanticus 0.01 869744 869744 S 692370 Altererythrobacter dongtanensis 0.01 836400 836400 S 543877 Altererythrobacter marensis 0.01 827743 827743 S 476157 Altererythrobacter ishigakiensis 0.01 805020 805020 S 361183 Altererythrobacter epoxidivorans 0.01 790695 790695 S 1982042 Altererythrobacter mangrovi 0.01 754335 754335 S 645517 Altererythrobacter namhicola 0.05 4612589 36634 G 1111 Porphyrobacter 0.04 3727555 71248 G1 2683265 unclassified Porphyrobacter 0.01 1021328 1021328 S 2547601 Porphyrobacter sp. YT40 0.01 929427 929427 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.01 900865 900865 S 2023229 Porphyrobacter sp. HT-58-2 0.01 804687 804687 S 1896196 Porphyrobacter sp. LM 6 0.01 848400 848400 S 1112 Porphyrobacter neustonensis 0.03 2740637 3912 G 1295327 Croceicoccus 0.02 1738362 1738362 S 450378 Croceicoccus marinus 0.01 998363 998363 S 1348774 Croceicoccus naphthovorans 0.01 693637 0 G 1855416 Qipengyuania 0.01 693637 693637 S 1532023 Qipengyuania sediminis 1.15 103810403 39444 O 204441 Rhodospirillales 0.61 55071723 125709 F 41295 Rhodospirillaceae 0.26 23134934 2940858 G 191 Azospirillum 0.07 6189014 5291731 S 192 Azospirillum brasilense 0.01 897283 897283 S1 1064539 Azospirillum brasilense Sp245 0.04 4011027 36897 G1 2630922 unclassified Azospirillum 0.02 1537762 1537762 S 652764 Azospirillum sp. TSH100 0.02 1449700 1449700 S 709810 Azospirillum sp. TSA2s 0.01 986668 986668 S 664962 Azospirillum sp. TSH58 0.03 2838426 17636 S 193 Azospirillum lipoferum 0.02 1646294 1646294 S1 137722 Azospirillum sp. B510 0.01 1174496 1174496 S1 862719 Azospirillum lipoferum 4B 0.02 1783630 1783630 S 2202148 Azospirillum thermophilum 0.02 1749512 1749512 S 528244 Azospirillum thiophilum 0.01 1267408 1267408 S 1226968 Azospirillum humicireducens 0.01 1218651 1218651 S 682998 Azospirillum ramasamyi 0.01 1136408 1136408 S 286727 Azospirillum oryzae 0.06 5574953 202240 G 13134 Magnetospirillum 0.03 2341569 226666 G1 2617991 unclassified Magnetospirillum 0.01 1118189 1118189 S 1663591 Magnetospirillum sp. XM-1 0.01 996714 996714 S 1639348 Magnetospirillum sp. ME-1 0.02 1742952 1231269 S 55518 Magnetospirillum gryphiswaldense 0.01 511683 72 S1 431944 Magnetospirillum gryphiswaldense MSR-1 0.01 511611 511611 S2 1430440 Magnetospirillum gryphiswaldense MSR-1 v2 0.01 1288192 1192 S 84159 Magnetospirillum magneticum 0.01 1287000 1287000 S1 342108 Magnetospirillum magneticum AMB-1 0.05 4624934 31411 G 168934 Thalassospira 0.02 1699490 1699490 S 2048283 Thalassospira marina 0.02 1459363 0 S 220697 Thalassospira xiamenensis 0.02 1459363 1459363 S1 1123366 Thalassospira xiamenensis M-5 = DSM 17429 0.02 1434670 1434670 S 1891279 Thalassospira indica 0.04 3428965 67988 G 2705399 Hypericibacter 0.02 1697249 1697249 S 2602015 Hypericibacter terrae 0.02 1663728 1663728 S 2602016 Hypericibacter adhaerens 0.03 2542047 102 G 1081 Rhodospirillum 0.01 1316686 1299111 S 1085 Rhodospirillum rubrum 0.00 17066 17066 S1 269796 Rhodospirillum rubrum ATCC 11170 0.00 509 509 S1 1036743 Rhodospirillum rubrum F11 0.01 1225259 0 S 34018 Rhodospirillum centenum 0.01 1225259 1225259 S1 414684 Rhodospirillum centenum SW 0.02 2197916 0 G 1543705 Nitrospirillum 0.02 2197916 0 S 28077 Nitrospirillum amazonense 0.02 2197916 2197916 S1 1441467 Nitrospirillum amazonense CBAmc 0.02 1904906 0 G 171436 Tistrella 0.02 1904906 0 S 171437 Tistrella mobilis 0.02 1904906 1904906 S1 1110502 Tistrella mobilis KA081020-065 0.02 1841439 0 G 1543704 Niveispirillum 0.02 1841439 1841439 S 1612173 Niveispirillum cyanobacteriorum 0.02 1716553 0 G 204447 Skermanella 0.02 1716553 1716553 S 2233999 Skermanella pratensis 0.02 1598114 0 G 2478349 Indioceanicola 0.02 1598114 1598114 S 2220096 Indioceanicola profundi 0.01 1280795 0 G 1231242 Ferrovibrio 0.01 1280795 1280795 S 2594003 Ferrovibrio terrae 0.01 1236299 0 G 1182780 Magnetospira 0.01 1236299 0 G1 2685734 unclassified Magnetospira 0.01 1236299 1236299 S 1288970 Magnetospira sp. QH-2 0.01 1145693 0 G 1612157 Pararhodospirillum 0.01 1145693 0 S 1084 Pararhodospirillum photometricum 0.01 1145693 1145693 S1 1150469 Pararhodospirillum photometricum DSM 122 0.01 1071038 0 F1 41296 unclassified Rhodospirillaceae 0.01 1071038 1071038 S 2728875 Rhodospirillaceae bacterium B3 0.01 883306 0 G 1263978 Candidatus Endolissoclinum 0.01 883306 10938 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 444968 444968 S1 1401328 Candidatus Endolissoclinum faulkneri L5 0.00 427400 427400 S1 1193729 Candidatus Endolissoclinum faulkneri L2 0.01 764122 0 G 1804663 Haematospirillum 0.01 764122 764122 S 1549855 Haematospirillum jordaniae 0.54 48699236 410932 F 433 Acetobacteraceae 0.14 12701218 2583953 G 434 Acetobacter 0.02 2209602 0 G1 151157 Acetobacter subgen. Acetobacter 0.02 2209602 2209602 S 435 Acetobacter aceti 0.02 1559713 1132891 S 438 Acetobacter pasteurianus 0.00 277443 277406 S1 481145 Acetobacter pasteurianus subsp. pasteurianus 0.00 37 37 S2 634458 Acetobacter pasteurianus IFO 3283-01-42C 0.00 75936 75936 S1 1006554 Acetobacter pasteurianus NBRC 101655 0.00 73443 73443 S1 1266844 Acetobacter pasteurianus 386B 0.01 1127696 1127696 S 1076596 Acetobacter persici 0.01 986883 986883 S 146474 Acetobacter orientalis 0.01 921593 0 G1 2628570 unclassified Acetobacter 0.01 917118 917118 S 2592655 Acetobacter sp. KACC 21233 0.00 4475 4475 S 2259883 Acetobacter sp. JWB 0.01 874775 874775 S 481146 Acetobacter ascendens 0.01 847159 847159 S 431306 Acetobacter ghanensis 0.01 562206 562206 S 104102 Acetobacter tropicalis 0.01 525010 525010 S 446692 Acetobacter senegalensis 0.00 298725 298725 S 2500548 Acetobacter oryzoeni 0.00 162737 162737 S 1633874 Acetobacter oryzifermentans 0.00 41090 41090 S 65959 Acetobacter pomorum 0.00 76 76 S 104097 Acetobacter estunensis 0.10 9430622 1620754 G 1434011 Komagataeibacter 0.03 2394554 1583810 S 28448 Komagataeibacter xylinus 0.01 810744 810744 S1 1296990 Komagataeibacter xylinus E25 0.01 1310406 1310406 S 265959 Komagataeibacter saccharivorans 0.01 1019485 0 S 436 Komagataeibacter hansenii 0.01 1019485 1019485 S1 714995 Komagataeibacter hansenii ATCC 23769 0.01 831227 0 S 1177712 Komagataeibacter medellinensis 0.01 831227 831227 S1 634177 Komagataeibacter medellinensis NBRC 3288 0.01 821289 821289 S 33995 Komagataeibacter europaeus 0.01 742508 742508 S 265960 Komagataeibacter nataicola 0.01 618879 618879 S 65958 Komagataeibacter oboediens 0.00 71520 71520 S 215221 Komagataeibacter rhaeticus 0.04 3992280 681853 G 441 Gluconobacter 0.02 1854204 802279 S 442 Gluconobacter oxydans 0.01 525517 525517 S1 1288313 Gluconobacter oxydans DSM 3504 0.01 486421 486421 S1 290633 Gluconobacter oxydans 621H 0.00 39987 39987 S1 1224746 Gluconobacter oxydans H24 0.01 958305 958305 S 318683 Gluconobacter albidus 0.01 497918 497918 S 257438 Gluconobacter thailandicus 0.03 3009619 0 F1 41293 unclassified Acetobacteraceae 0.03 3009619 3009619 S 1909293 Acetobacteraceae bacterium 0.03 3003851 1166624 G 125216 Roseomonas 0.01 1225348 1225348 S 257708 Roseomonas gilardii 0.00 308675 308675 S 207340 Roseomonas mucosa 0.00 303204 0 G1 2617492 unclassified Roseomonas 0.00 303204 303204 S 2018065 Roseomonas sp. FDAARGOS_362 0.03 2506088 0 G 364409 Granulibacter 0.03 2506088 2417058 S 364410 Granulibacter bethesdensis 0.00 89023 89023 S1 1052095 Granulibacter bethesdensis CGDNIH4 0.00 7 7 S1 391165 Granulibacter bethesdensis CGDNIH1 0.02 1709054 0 G 93 Stella 0.02 1709054 1709054 S 94 Stella humosa 0.02 1443774 803853 G 522 Acidiphilium 0.00 349371 1544 S 62140 Acidiphilium multivorum 0.00 347827 347827 S1 926570 Acidiphilium multivorum AIU301 0.00 290550 0 S 524 Acidiphilium cryptum 0.00 290550 290550 S1 349163 Acidiphilium cryptum JF-5 0.02 1404167 0 G 153497 Kozakia 0.02 1404167 1404167 S 153496 Kozakia baliensis 0.02 1403498 52 G 1223423 Neokomagataea 0.01 799391 799391 S 661191 Neokomagataea tanensis 0.01 604055 0 G1 2637481 unclassified Neokomagataea 0.01 604055 604055 S 2558360 Neokomagataea sp. Ha5 0.01 1295846 15 G 1649499 Swingsia 0.01 679385 679385 S 1293412 Swingsia samuiensis 0.01 616446 0 G1 2637697 unclassified Swingsia 0.01 616446 616446 S 2558361 Swingsia sp. F3b2 0.01 1283873 0 G 89583 Gluconacetobacter 0.01 1283873 0 S 33996 Gluconacetobacter diazotrophicus 0.01 1283873 1283873 S1 272568 Gluconacetobacter diazotrophicus PA1 5 0.01 1128593 0 G 2603324 Acidibrevibacterium 0.01 1128593 1128593 S 1969806 Acidibrevibacterium fodinaquatile 0.01 1017244 0 G 320496 Neoasaia 0.01 1017244 1017244 S 320497 Neoasaia chiangmaiensis 0.01 986611 0 G 91914 Asaia 0.01 986611 0 S 91915 Asaia bogorensis 0.01 986611 986611 S1 1231624 Asaia bogorensis NBRC 16594 0.01 732914 0 G 1079922 Commensalibacter 0.01 732914 446417 G1 2630218 unclassified Commensalibacter 0.00 152061 152061 S 2478912 Commensalibacter sp. AMU001 0.00 134436 134436 S 2070537 Commensalibacter sp. ESL0284 0.01 624915 0 G 1602345 Parasaccharibacter 0.01 624915 624915 S 1510841 Parasaccharibacter apium 0.01 614137 0 G 1654741 Bombella 0.01 614137 0 G1 2644098 unclassified Bombella 0.01 614137 614137 S 2697033 Bombella sp. KACC 21507 0.36 32680365 0 O 204458 Caulobacterales 0.36 32680365 105372 F 76892 Caulobacteraceae 0.15 13902347 542982 G 75 Caulobacter 0.05 4275088 54198 G1 2648921 unclassified Caulobacter 0.02 1535058 1535058 S 366602 Caulobacter sp. K31 0.02 1444432 1444432 S 2708539 Caulobacter sp. Ji-3-8 0.01 1241400 1241400 S 69665 Caulobacter sp. FWC26 0.03 2360859 2360423 S 155892 Caulobacter vibrioides 0.00 344 344 S1 190650 Caulobacter vibrioides CB15 0.00 92 92 S1 565050 Caulobacter vibrioides NA1000 0.02 1524644 1524644 S 1679497 Caulobacter flavus 0.02 1522863 1522863 S 2010972 Caulobacter rhizosphaerae 0.01 1311003 1311003 S 69666 Caulobacter mirabilis 0.01 1235015 1233580 S 88688 Caulobacter segnis 0.00 1435 1435 S1 509190 Caulobacter segnis ATCC 21756 0.01 1129893 1129893 S 69395 Caulobacter henricii 0.13 11894623 1459084 G 41275 Brevundimonas 0.06 5478634 815637 G1 2622653 unclassified Brevundimonas 0.01 985043 985043 S 1938605 Brevundimonas sp. LM2 0.01 940154 940154 S 2591463 Brevundimonas sp. M20 0.01 783069 783069 S 2561924 Brevundimonas sp. MF30-B 0.01 527789 527789 S 2579977 Brevundimonas sp. SGAir0440 0.00 423738 423738 S 1827469 Brevundimonas sp. GW460-12-10-14-LB2 0.00 371659 371659 S 2562582 Brevundimonas sp. 'scallop' 0.00 330244 330244 S 1532555 Brevundimonas sp. DS20 0.00 301301 301301 S 2560058 Brevundimonas sp. Bb-A 0.02 1719905 1719905 S 588932 Brevundimonas naejangsanensis 0.01 952539 0 S 74313 Brevundimonas subvibrioides 0.01 952539 952539 S1 633149 Brevundimonas subvibrioides ATCC 15264 0.01 815508 815508 S 74329 Brevundimonas mediterranea 0.01 733843 733843 S 293 Brevundimonas diminuta 0.01 471564 471564 S 41276 Brevundimonas vesicularis 0.00 263546 263546 S 1325724 Brevundimonas vancanneytii 0.03 2350732 0 G 76890 Asticcacaulis 0.03 2350732 1160089 S 78587 Asticcacaulis excentricus 0.01 1190643 1190643 S1 573065 Asticcacaulis excentricus CB 48 0.02 2079041 2730 G 20 Phenylobacterium 0.01 1237114 0 S 284016 Phenylobacterium zucineum 0.01 1237114 1237114 S1 450851 Phenylobacterium zucineum HLK1 0.01 839197 0 G1 2640670 unclassified Phenylobacterium 0.01 839197 839197 S 2201350 Phenylobacterium sp. HYN0004 0.01 1186258 0 G 2768684 Terricaulis 0.01 1186258 1186258 S 2686094 Terricaulis silvestris 0.01 1161992 0 F1 81440 unclassified Caulobacteraceae 0.01 1161992 1161992 S 1759059 Caulobacteraceae bacterium OTSz_A_272 0.21 19144882 2441 O 766 Rickettsiales 0.12 10994495 2506 F 942 Anaplasmataceae 0.06 5243016 0 F1 952 Wolbachieae 0.06 5243016 713446 G 953 Wolbachia 0.05 4110655 1007783 G1 2640676 unclassified Wolbachia 0.01 465626 465626 S 169402 Wolbachia endosymbiont of Folsomia candida 0.00 351338 351338 S 2732593 Wolbachia endosymbiont of Ctenocephalides felis wCfeT 0.00 310542 310542 S 2732594 Wolbachia endosymbiont of Ctenocephalides felis wCfeJ 0.00 286246 286246 S 246273 Wolbachia endosymbiont of Cimex lectularius 0.00 273633 273633 S 80850 Wolbachia endosymbiont of Litomosoides sigmodontis 0.00 248673 248673 S 1812115 Wolbachia endosymbiont of Dirofilaria (Dirofilaria) immitis 0.00 248519 248519 S 1812111 Wolbachia endosymbiont of Cruorifilaria tuberocauda 0.00 214972 214972 S 1812112 Wolbachia endosymbiont of Dipetalonema caudispina 0.00 156849 156849 S 125593 Wolbachia endosymbiont of Trichogramma pretiosum 0.00 137211 137211 S 116598 Wolbachia endosymbiont of Diaphorina citri 0.00 64233 64233 S 215173 Wolbachia endosymbiont of Bemisia tabaci 0.00 58158 0 S 263437 Wolbachia endosymbiont of Culex quinquefasciatus 0.00 58158 58158 S1 570417 Wolbachia endosymbiont of Culex quinquefasciatus Pel 0.00 50666 50512 S 80849 Wolbachia endosymbiont of Brugia malayi 0.00 154 154 S1 292805 Wolbachia endosymbiont strain TRS of Brugia malayi 0.00 48267 48267 S 96495 Wolbachia endosymbiont of Brugia pahangi 0.00 37943 459 S 77038 Wolbachia endosymbiont of Drosophila simulans 0.00 13775 13775 S1 1236909 Wolbachia endosymbiont of Drosophila simulans wHa 0.00 11981 11981 S1 225364 Wolbachia endosymbiont of Drosophila simulans wAu 0.00 11728 11728 S1 1236908 Wolbachia endosymbiont of Drosophila simulans wNo 0.00 36555 36555 S 1335053 Wolbachia endosymbiont of Chrysomya megacephala 0.00 35555 35555 S 2591635 Wolbachia endosymbiont of Carposina sasakii 0.00 29924 0 S 77551 Wolbachia endosymbiont of Onchocerca volvulus 0.00 29924 29924 S1 1410384 Wolbachia endosymbiont of Onchocerca volvulus str. Cameroon 0.00 29186 29186 S 100901 Wolbachia endosymbiont of Onchocerca ochengi 0.00 10135 10135 S 1633785 Wolbachia endosymbiont of Drosophila incompta 0.00 6276 6276 S 109663 Wolbachia endosymbiont of Drosophila mauritiana 0.00 1237 1237 S 307502 Wolbachia endosymbiont of Drosophila ananassae 0.00 1045 1045 S 66084 Wolbachia sp. wRi 0.00 83 83 S 163164 Wolbachia endosymbiont of Drosophila melanogaster 0.00 418915 418140 S 955 Wolbachia pipientis 0.00 775 775 S1 1116230 Wolbachia pipientis wAlbB 0.03 2473837 90434 G 943 Ehrlichia 0.02 2136610 16862 G1 106178 canis group 0.01 1128181 1049214 S 779 Ehrlichia ruminantium 0.00 77616 77616 S1 302409 Ehrlichia ruminantium str. Gardel 0.00 1351 1351 S1 254945 Ehrlichia ruminantium str. Welgevonden 0.00 379120 367069 S 944 Ehrlichia canis 0.00 12051 12051 S1 269484 Ehrlichia canis str. Jake 0.00 357991 347733 S 945 Ehrlichia chaffeensis 0.00 3093 3093 S1 1249656 Ehrlichia chaffeensis str. Wakulla 0.00 1751 1751 S1 1249652 Ehrlichia chaffeensis str. Jax 0.00 1534 1534 S1 1249653 Ehrlichia chaffeensis str. Liberty 0.00 1520 1520 S1 1249654 Ehrlichia chaffeensis str. Osceola 0.00 1260 1260 S1 205920 Ehrlichia chaffeensis str. Arkansas 0.00 987 987 S1 1249655 Ehrlichia chaffeensis str. Saint Vincent 0.00 69 69 S1 1249650 Ehrlichia chaffeensis str. West Paces 0.00 44 44 S1 1249651 Ehrlichia chaffeensis str. Heartland 0.00 254456 0 S 35795 Ehrlichia muris 0.00 254456 254456 S1 1423892 Ehrlichia muris AS145 0.00 246793 0 G1 106181 unclassified Ehrlichia 0.00 246793 246793 S 391036 Ehrlichia sp. HF 0.02 2245666 133171 G 768 Anaplasma 0.01 767203 0 G1 106179 phagocytophilum group 0.01 767203 524669 S 948 Anaplasma phagocytophilum 0.00 136289 136289 S1 1392506 Anaplasma phagocytophilum str. Norway variant1 0.00 101398 101398 S1 1392507 Anaplasma phagocytophilum str. Norway variant2 0.00 2405 2405 S1 1173064 Anaplasma phagocytophilum str. JM 0.00 2401 2401 S1 1184254 Anaplasma phagocytophilum str. Dog2 0.00 28 28 S1 1184253 Anaplasma phagocytophilum str. HZ2 0.00 13 13 S1 212042 Anaplasma phagocytophilum str. HZ 0.00 377724 377724 S 949 Anaplasma platys 0.00 358319 317825 S 770 Anaplasma marginale 0.00 17624 17624 S1 234826 Anaplasma marginale str. St. Maries 0.00 17079 17079 S1 320483 Anaplasma marginale str. Florida 0.00 3153 3153 S1 1412840 Anaplasma marginale str. Gypsy Plains 0.00 2638 2638 S1 1412841 Anaplasma marginale str. Dawn 0.00 349868 0 S 142058 Anaplasma ovis 0.00 349868 349868 S1 1248439 Anaplasma ovis str. Haibei 0.00 259381 0 S 769 Anaplasma centrale 0.00 259381 259381 S1 574556 Anaplasma centrale str. Israel 0.01 1029470 59373 G 33993 Neorickettsia 0.00 277034 0 S 33994 Neorickettsia helminthoeca 0.00 277034 277034 S1 1286528 Neorickettsia helminthoeca str. Oregon 0.00 247823 247823 S 2686014 Neorickettsia findlayensis 0.00 223850 0 S 950 Neorickettsia risticii 0.00 223850 223850 S1 434131 Neorickettsia risticii str. Illinois 0.00 221390 0 S 951 Neorickettsia sennetsu 0.00 221390 221390 S1 222891 Neorickettsia sennetsu str. Miyayama 0.07 6136472 141 F 775 Rickettsiaceae 0.06 5687958 579 F1 33988 Rickettsieae 0.05 4428919 292550 G 780 Rickettsia 0.03 2730592 1001501 G1 114277 spotted fever group 0.00 227117 17040 S 42862 Rickettsia felis 0.00 210077 210077 S1 315456 Rickettsia felis URRWXCal2 0.00 183564 0 S 786 Rickettsia akari 0.00 183564 183564 S1 293614 Rickettsia akari str. Hartford 0.00 169158 0 S 787 Rickettsia australis 0.00 169158 169158 S1 1105110 Rickettsia australis str. Cutlack 0.00 163565 0 G2 2750824 unclassified spotted fever group 0.00 163565 163565 S 444612 Rickettsia endosymbiont of Ixodes scapularis 0.00 140511 140147 S 33989 Rickettsia amblyommatis 0.00 354 354 S1 1105111 Rickettsia amblyommatis str. GAT-30V 0.00 10 10 S1 933950 Rickettsia amblyommatis str. AaR/SC 0.00 92055 17832 S 35791 Rickettsia massiliae 0.00 39730 39730 S1 416276 Rickettsia massiliae MTU5 0.00 34493 34493 S1 1105112 Rickettsia massiliae str. AZT80 0.00 81577 66094 S 33992 Rickettsia rhipicephali 0.00 15483 15483 S1 1105113 Rickettsia rhipicephali str. 3-7-female6-CWPP 0.00 80622 80622 S 369822 Rickettsia raoultii 0.00 71138 0 S 35789 Rickettsia helvetica 0.00 71138 71138 S1 1144888 Rickettsia helvetica C9P9 0.00 69247 0 S 33991 Rickettsia montanensis 0.00 69247 69247 S1 1105114 Rickettsia montanensis str. OSU 85-930 0.00 66578 66578 S 109232 Rickettsia monacensis 0.00 63624 63624 S 238800 Rickettsia asiatica 0.00 51740 32148 S 35792 Rickettsia parkeri 0.00 19592 19592 S1 1105108 Rickettsia parkeri str. Portsmouth 0.00 43310 28661 S 783 Rickettsia rickettsii 0.00 11060 11060 S1 1105101 Rickettsia rickettsii str. Hlp#2 0.00 1692 1692 S1 1105102 Rickettsia rickettsii str. Colombia 0.00 1339 1339 S1 1105104 Rickettsia rickettsii str. Brazil 0.00 245 245 S1 1105105 Rickettsia rickettsii str. Arizona 0.00 122 122 S1 392021 Rickettsia rickettsii str. 'Sheila Smith' 0.00 58 58 S1 1338411 Rickettsia rickettsii str. R 0.00 38 38 S1 1105100 Rickettsia rickettsii str. Hino 0.00 36 36 S1 1105103 Rickettsia rickettsii str. Hauke 0.00 30 30 S1 1337396 Rickettsia rickettsii str. Morgan 0.00 29 29 S1 452659 Rickettsia rickettsii str. Iowa 0.00 34541 0 S 35788 Rickettsia africae 0.00 34541 34541 S1 347255 Rickettsia africae ESF-5 0.00 33729 0 S 47589 Rickettsia peacockii 0.00 33729 33729 S1 562019 Rickettsia peacockii str. Rustic 0.00 31479 31371 S 226665 Rickettsia heilongjiangensis 0.00 108 108 S1 1032845 Rickettsia heilongjiangensis 054 0.00 29321 0 S 781 Rickettsia conorii 0.00 29321 29321 S1 272944 Rickettsia conorii str. Malish 7 0.00 29116 28516 S 35790 Rickettsia japonica 0.00 600 600 S1 652620 Rickettsia japonica YH 0.00 27360 0 G2 266068 Rickettsia sibirica subgroup 0.00 27360 0 S 35793 Rickettsia sibirica 0.00 27360 27360 S1 272951 Rickettsia sibirica 246 0.00 17580 17292 S 35794 Rickettsia slovaca 0.00 252 252 S1 941638 Rickettsia slovaca 13-B 0.00 36 36 S1 1105109 Rickettsia slovaca str. D-CWPP 0.00 16633 0 S 1105106 Rickettsia philipii 0.00 16633 16633 S1 481009 Rickettsia philipii str. 364D 0.00 5526 5526 S 1068590 Rickettsia asembonensis 0.01 659387 494 G1 1129742 belli group 0.00 330049 310805 S 33990 Rickettsia bellii 0.00 10884 10884 S1 391896 Rickettsia bellii OSU 85-389 0.00 8360 8360 S1 336407 Rickettsia bellii RML369-C 0.00 328844 202496 S 788 Rickettsia canadensis 0.00 64321 64321 S1 293613 Rickettsia canadensis str. McKiel 0.00 62027 62027 S1 1105107 Rickettsia canadensis str. CA410 0.01 525821 52534 G1 114292 typhus group 0.00 240736 236074 S 782 Rickettsia prowazekii 0.00 1245 1245 S1 1290427 Rickettsia prowazekii str. NMRC Madrid E 0.00 940 940 S1 1105098 Rickettsia prowazekii str. GvV257 0.00 824 824 S1 1290428 Rickettsia prowazekii str. Breinl 0.00 662 662 S1 1105099 Rickettsia prowazekii str. RpGvF24 0.00 380 380 S1 1105096 Rickettsia prowazekii str. BuV67-CWPP 0.00 238 238 S1 272947 Rickettsia prowazekii str. Madrid E 0.00 153 153 S1 449216 Rickettsia prowazekii str. Rp22 0.00 122 122 S1 1105095 Rickettsia prowazekii str. Katsinyian 0.00 52 52 S1 1105097 Rickettsia prowazekii str. Dachau 0.00 46 46 S1 1105094 Rickettsia prowazekii str. Chernikova 0.00 232551 232347 S 785 Rickettsia typhi 0.00 94 94 S1 1003202 Rickettsia typhi str. B9991CWPP 0.00 67 67 S1 257363 Rickettsia typhi str. Wilmington 0.00 43 43 S1 1003201 Rickettsia typhi str. TH1527 0.00 220569 0 G1 114295 unclassified Rickettsia 0.00 198710 0 S 337479 Rickettsia endosymbiont of Bemisia tabaci 0.00 198710 198710 S1 1182263 Rickettsia sp. MEAM1 (Bemisia tabaci) 0.00 21859 21859 S 1133329 Rickettsia endosymbiont of Ixodes pacificus 0.01 1069249 0 G 69474 Orientia 0.01 1069249 819104 S 784 Orientia tsutsugamushi 0.00 130479 130479 S1 357244 Orientia tsutsugamushi str. Boryong 0.00 85480 85480 S1 1359184 Orientia tsutsugamushi str. Gilliam 0.00 34186 34186 S1 334380 Orientia tsutsugamushi str. Ikeda 0.00 189211 0 G 2601645 Candidatus Sneabacter 0.00 189211 189211 S 2601646 Candidatus Sneabacter namystus 0.00 448373 0 G 2115980 Candidatus Phycorickettsia 0.00 448373 448373 S 2115978 Candidatus Phycorickettsia trachydisci 0.01 1062164 40 O1 1699067 unclassified Rickettsiales 0.01 537541 537541 S 1528098 Rickettsiales bacterium Ac37b 0.01 524583 524583 S 2486578 Rickettsiales endosymbiont of Stachyamoeba lipophora 0.01 600279 14 F 1328881 Candidatus Midichloriaceae 0.00 342647 0 G 411566 Candidatus Midichloria 0.00 342647 0 S 234827 Candidatus Midichloria mitochondrii 0.00 342647 342647 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.00 257618 0 G 1802983 Candidatus Fokinia 0.00 257618 257618 S 1802984 Candidatus Fokinia solitaria 0.00 349031 0 F 2603433 Candidatus Deianiraeaceae 0.00 349031 0 G 2603321 Candidatus Deianiraea 0.00 349031 349031 S 2163644 Candidatus Deianiraea vastatrix 0.09 8528175 638 C1 82117 Alphaproteobacteria incertae sedis 0.05 4858775 30928 G 1632780 Phreatobacter 0.02 2112740 2112740 S 1940610 Phreatobacter stygius 0.02 1455988 0 G1 2644610 unclassified Phreatobacter 0.02 1455988 1455988 S 2570229 Phreatobacter sp. NMCR1094 0.01 1259119 1259119 S 1868589 Phreatobacter cathodiphilus 0.02 1480793 0 G 213485 Micavibrio 0.02 1480793 86098 S 349221 Micavibrio aeruginosavorus 0.01 701476 701476 S1 856793 Micavibrio aeruginosavorus ARL-13 0.01 693219 693219 S1 349215 Micavibrio aeruginosavorus EPB 0.01 1313066 0 G 991903 Polymorphum 0.01 1313066 0 S 991904 Polymorphum gilvum 0.01 1313066 1313066 S1 991905 Polymorphum gilvum SL003B-26A1 0.01 874903 0 C2 62654 SAR116 cluster 0.01 874903 0 G 767891 Candidatus Puniceispirillum 0.01 874903 0 S 767892 Candidatus Puniceispirillum marinum 0.01 874903 874903 S1 488538 Candidatus Puniceispirillum marinum IMCC1322 0.04 3340683 1118 O 54526 Pelagibacterales 0.03 3055292 9019 F 1655514 Pelagibacteraceae 0.03 2320439 50684 G 198251 Candidatus Pelagibacter 0.02 1666163 6940 G1 2647897 unclassified Candidatus Pelagibacter 0.00 352923 352923 S 1977865 Candidatus Pelagibacter sp. RS40 0.00 341635 341635 S 2268451 Candidatus Pelagibacter sp. FZCC0015 0.00 335662 335662 S 1388755 Candidatus Pelagibacter sp. HIMB1321 0.00 331635 331635 S 1002672 Candidatus Pelagibacter sp. IMCC9063 0.00 297368 297368 S 1977864 Candidatus Pelagibacter sp. RS39 0.00 309445 309445 S 2563896 Candidatus Pelagibacter giovannonii 0.00 294147 0 S 198252 Candidatus Pelagibacter ubique 0.00 294147 294147 S1 335992 Candidatus Pelagibacter ubique HTCC1062 0.01 725834 32 F1 1655516 unclassified Pelagibacteraceae 0.00 392728 392728 S 744985 alpha proteobacterium HIMB59 0.00 333074 333074 S 859653 alpha proteobacterium HIMB5 0.00 284273 0 G 2045213 Candidatus Fonsibacter 0.00 284273 284273 S 1925548 Candidatus Fonsibacter ubiquis 0.03 2327742 53 O 1921002 Holosporales 0.01 1014262 201 F 44746 Holosporaceae 0.01 485822 0 F1 204454 unclassified Holosporaceae 0.01 485822 485822 S 86106 endosymbiont of Acanthamoeba sp. UWC8 0.00 356374 679 G 2601574 Candidatus Cytomitobacter 0.00 182583 182583 S 2066024 Candidatus Cytomitobacter primus 0.00 173112 173112 S 2601575 Candidatus Cytomitobacter indipagum 0.00 171865 0 G 2601651 Candidatus Nesciobacter 0.00 171865 171865 S 2601668 Candidatus Nesciobacter abundans 0.01 752203 0 F 1777752 Candidatus Paracaedibacteraceae 0.01 752203 0 G 1521255 Candidatus Paracaedibacter 0.01 752203 752203 S 91604 Candidatus Paracaedibacter acanthamoebae 0.01 561224 0 F 2100208 Caedimonadaceae 0.01 561224 0 G 1509243 Candidatus Nucleicultrix 0.01 561224 0 S 1509244 Candidatus Nucleicultrix amoebiphila 0.01 561224 561224 S1 1414854 Candidatus Nucleicultrix amoebiphila FS5 0.03 2285029 0 O 2066490 Emcibacterales 0.03 2285029 0 F 2066491 Emcibacteraceae 0.03 2285029 543 G 1602338 Emcibacter 0.01 1304120 1304120 S 2043170 Emcibacter congregatus 0.01 980366 0 G1 2644914 unclassified Emcibacter 0.01 980366 980366 S 2582913 Emcibacter sp. MEBiC09520 0.02 1402507 0 O 1191478 Magnetococcales 0.02 1402507 0 F 1191479 Magnetococcaceae 0.02 1402507 255 G 162171 Magnetococcus 0.02 1389988 0 S 1124597 Magnetococcus marinus 0.02 1389988 1389988 S1 156889 Magnetococcus marinus MC-1 0.00 12264 12264 S 451514 Candidatus Magnetococcus massalia 0.01 907585 0 O 255473 Parvularculales 0.01 907585 0 F 255474 Parvularculaceae 0.01 907585 0 G 208215 Parvularcula 0.01 907585 0 S 208216 Parvularcula bermudensis 0.01 907585 907585 S1 314260 Parvularcula bermudensis HTCC2503 0.00 9 0 C1 33807 unclassified Alphaproteobacteria 0.00 9 9 S 538945 alpha proteobacterium endosymbiont of Amoeba proteus 7.59 684832712 1522420 C 28216 Betaproteobacteria 6.16 555428248 2910856 O 80840 Burkholderiales 2.87 258688905 3015395 F 119060 Burkholderiaceae 1.12 101306953 8812811 G 32008 Burkholderia 0.54 48573781 8370712 G1 87882 Burkholderia cepacia complex 0.07 6445692 5979726 S 95486 Burkholderia cenocepacia 0.00 329549 329549 S1 406425 Burkholderia cenocepacia MC0-3 0.00 110131 110131 S1 1055524 Burkholderia cenocepacia H111 0.00 23287 23287 S1 331272 Burkholderia cenocepacia HI2424 0.00 2902 2902 S1 331271 Burkholderia cenocepacia AU 1054 0.00 97 97 S1 216591 Burkholderia cenocepacia J2315 0.05 4567450 2567785 S 292 Burkholderia cepacia 0.01 1115633 1115633 S1 1395570 Burkholderia cepacia JBK9 0.01 883328 883328 S1 1009846 Burkholderia cepacia GG4 0.00 704 704 S1 983594 Burkholderia cepacia ATCC 25416 0.04 4057969 3898141 S 87883 Burkholderia multivorans 0.00 159807 159807 S1 395019 Burkholderia multivorans ATCC 17616 0.00 21 21 S1 985079 Burkholderia multivorans ATCC BAA-247 0.04 3564240 3296690 S 101571 Burkholderia ubonensis 0.00 267550 267550 S1 1249668 Burkholderia ubonensis MSMB22 0.03 3074581 3074581 S 482957 Burkholderia lata 0.03 3015549 3015549 S 488447 Burkholderia contaminans 0.03 2369297 2369297 S 95485 Burkholderia stabilis 0.02 1843699 1843699 S 60550 Burkholderia pyrrocinia 0.02 1467912 1467912 S 1503055 Burkholderia territorii 0.01 1266463 1266463 S 1503054 Burkholderia stagnalis 0.01 1144443 42168 S 152480 Burkholderia ambifaria 0.01 726763 726763 S1 339670 Burkholderia ambifaria AMMD 0.00 375512 375512 S1 398577 Burkholderia ambifaria MC40-6 0.01 1094346 1094346 S 265293 [Pseudomonas] mesoacidophila 0.01 1051169 1049283 S 152500 Burkholderia dolosa 0.00 1852 1852 S1 1385930 Burkholderia dolosa PC543 0.00 34 34 S1 350701 Burkholderia dolosa AU0158 0.01 986722 986673 S 60552 Burkholderia vietnamiensis 0.00 49 49 S1 1449978 Burkholderia vietnamiensis LMG 10929 0.01 932508 932508 S 488731 Burkholderia seminalis 0.01 920134 920134 S 488729 Burkholderia metallica 0.01 800290 800290 S 179879 Burkholderia anthina 0.01 767565 767565 S 488732 Burkholderia diffusa 0.01 572710 572710 S 1207504 Burkholderia pseudomultivorans 0.00 260330 260330 S 488446 Burkholderia latens 0.23 20835828 3746081 G1 2613784 unclassified Burkholderia 0.03 2313978 2313978 S 2571746 Burkholderia sp. DHOD12 0.02 1963811 1963811 S 758782 Burkholderia sp. THE68 0.02 1706340 1706340 S 640512 Burkholderia sp. CCGE1003 0.02 1382815 1382815 S 1740163 Burkholderia sp. Bp7605 0.01 1207731 1207731 S 1705310 Burkholderia sp. IDO3 0.01 1127864 1127864 S 2217913 Burkholderia sp. JP2-270 0.01 1105137 1105137 S 1795043 Burkholderia sp. PAMC 26561 0.01 1006089 1006089 S 1855726 Burkholderia sp. KK1 0.01 816815 816815 S 1637862 Burkholderia sp. LA-2-3-30-S1-D2 0.01 781359 781359 S 1637869 Burkholderia sp. MSMB0856 0.01 776439 776439 S 1097668 Burkholderia sp. YI23 0.01 750178 750178 S 1637853 Burkholderia sp. NRF60-BP8 0.01 713157 713157 S 758796 Burkholderia sp. RPE67 0.01 702397 702397 S 1795874 Burkholderia sp. PAMC 28687 0.00 290623 290623 S 1179675 Burkholderia sp. KBS0801 0.00 222082 222082 S 2732364 Burkholderia sp. MBR-1 0.00 133777 133777 S 416344 Burkholderia sp. KJ006 0.00 75197 75197 S 640510 Burkholderia sp. CCGE1001 0.00 13222 13222 S 326454 Burkholderia sp. M701 0.00 508 508 S 1468409 Burkholderia sp. 2002721687 0.00 228 228 S 1740162 Burkholderia sp. Bp5365 0.14 12606727 3277079 G1 111527 pseudomallei group 0.05 4162583 3574414 S 28450 Burkholderia pseudomallei 0.00 52421 52421 S1 1249475 Burkholderia pseudomallei MSHR840 0.00 49618 49618 S1 1249658 Burkholderia pseudomallei PB08298010 0.00 43756 43756 S1 1437000 Burkholderia pseudomallei MSHR1153 0.00 42211 42211 S1 1249469 Burkholderia pseudomallei MSHR1328 0.00 41168 41168 S1 1249470 Burkholderia pseudomallei MSHR1079 0.00 40799 40799 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.00 38630 38630 S1 1435365 Burkholderia pseudomallei TSV 48 0.00 37867 37867 S1 1439852 Burkholderia pseudomallei K42 0.00 36108 36108 S1 1241583 Burkholderia pseudomallei NCTC 13179 0.00 34253 34253 S1 331978 Burkholderia pseudomallei Pasteur 52237 0.00 29615 29615 S1 1249472 Burkholderia pseudomallei MSHR2543 0.00 29227 29227 S1 272560 Burkholderia pseudomallei K96243 0.00 20017 20017 S1 1306418 Burkholderia pseudomallei HBPUB10134a 0.00 16718 16718 S1 1249477 Burkholderia pseudomallei NAU35A-3 0.00 15541 15541 S1 1435372 Burkholderia pseudomallei MSHR3965 0.00 14632 14632 S1 557724 Burkholderia pseudomallei 576 0.00 12953 12953 S1 1229785 Burkholderia pseudomallei BPC006 0.00 6255 6255 S1 1306419 Burkholderia pseudomallei HBPUB10303a 0.00 6169 6169 S1 797300 Burkholderia pseudomallei Bp22 0.00 3597 3597 S1 1435984 Burkholderia pseudomallei MSHR62 0.00 3570 3570 S1 1435994 Burkholderia pseudomallei MSHR2243 0.00 3541 3541 S1 357347 Burkholderia pseudomallei 1106b 0.00 2890 2890 S1 1306417 Burkholderia pseudomallei MSHR5858 0.00 1799 1799 S1 320371 Burkholderia pseudomallei 1710a 0.00 996 996 S1 1435985 Burkholderia pseudomallei MSHR435 0.00 862 862 S1 1249659 Burkholderia pseudomallei MSHR520 0.00 596 596 S1 1249473 Burkholderia pseudomallei MSHR491 0.00 474 474 S1 1249476 Burkholderia pseudomallei NAU20B-16 0.00 355 355 S1 1249474 Burkholderia pseudomallei MSHR511 0.00 269 269 S1 1335307 Burkholderia pseudomallei MSHR305 0.00 243 243 S1 1249471 Burkholderia pseudomallei MSHR146 0.00 203 203 S1 884204 Burkholderia pseudomallei 1026b 0.00 154 154 S1 1306421 Burkholderia pseudomallei MSHR5855 0.00 153 153 S1 320372 Burkholderia pseudomallei 1710b 0.00 124 124 S1 1439855 Burkholderia pseudomallei A79A 0.00 105 105 S1 360118 Burkholderia pseudomallei 406e 0.00 91 91 S1 1306420 Burkholderia pseudomallei MSHR5848 0.00 77 77 S1 320373 Burkholderia pseudomallei 668 0.00 47 47 S1 1439854 Burkholderia pseudomallei B03 0.00 35 35 S1 441156 Burkholderia pseudomallei 7894 0.00 24 24 S1 357348 Burkholderia pseudomallei 1106a 0.00 6 6 S1 536230 Burkholderia pseudomallei MSHR346 0.02 1630288 1586299 S 57975 Burkholderia thailandensis 0.00 33394 33394 S1 1249665 Burkholderia thailandensis E254 0.00 5575 5575 S1 271848 Burkholderia thailandensis E264 0.00 1356 1356 S1 1249662 Burkholderia thailandensis E444 0.00 1250 1250 S1 1249664 Burkholderia thailandensis 34 0.00 694 694 S1 1249663 Burkholderia thailandensis H0587 0.00 432 432 S1 1241582 Burkholderia thailandensis 2002721723 0.00 428 428 S1 1250339 Burkholderia thailandensis MSMB59 0.00 403 403 S1 1249661 Burkholderia thailandensis MSMB121 0.00 379 379 S1 1249667 Burkholderia thailandensis USAMRU Malaysia #20 0.00 78 78 S1 1249660 Burkholderia thailandensis 2002721643 0.01 1118485 908488 S 342113 Burkholderia oklahomensis 0.00 209827 209827 S1 441162 Burkholderia oklahomensis C6786 0.00 170 170 S1 441163 Burkholderia oklahomensis EO147 0.01 868669 868669 S 1385592 Burkholderia sp. BDU8 0.01 760838 760838 S 1385591 Burkholderia sp. BDU6 0.00 237652 237652 S 1637837 Burkholderia sp. MSMB0266 0.00 203387 203387 S 1636423 Burkholderia sp. MSMB1588 0.00 169263 169263 S 1637841 Burkholderia sp. MSMB0852 0.00 117368 117368 S 1637831 Burkholderia sp. MSMB617WGS 0.00 60439 59353 S 13373 Burkholderia mallei 0.00 901 901 S1 320389 Burkholderia mallei NCTC 10247 0.00 130 130 S1 243160 Burkholderia mallei ATCC 23344 0.00 45 45 S1 320388 Burkholderia mallei SAVP1 0.00 10 10 S1 412022 Burkholderia mallei NCTC 10229 0.00 676 676 S 430531 Burkholderia humptydooensis 0.05 4699902 3542180 S 28095 Burkholderia gladioli 0.01 665065 665065 S1 999541 Burkholderia gladioli BSR3 0.01 492657 492657 S1 32009 Burkholderia gladioli pv. gladioli 0.02 2073270 1846545 S 337 Burkholderia glumae 0.00 107856 107856 S1 1176514 Burkholderia glumae AU6208 0.00 94726 94726 S1 626418 Burkholderia glumae BGR1 0.00 24143 24143 S1 1176492 Burkholderia glumae LMG 2196 = ATCC 33617 0.02 1955059 1955059 S 41899 Burkholderia plantarii 0.02 1749575 1749575 S 758793 Burkholderia insecticola 0.66 59735972 5160441 G 1822464 Paraburkholderia 0.18 15896935 138055 G1 2615204 unclassified Paraburkholderia 0.03 2691512 2691512 S 2547399 Paraburkholderia sp. 7MH5 0.02 2023513 2023513 S 2571747 Paraburkholderia sp. 7Q-K02 0.02 2023444 2023444 S 1926494 Paraburkholderia sp. SOS3 0.02 1978268 1978268 S 2571748 Paraburkholderia sp. DHF22 0.02 1927437 1927437 S 2735434 Paraburkholderia sp. PGU19 0.02 1864899 1864899 S 640511 Paraburkholderia sp. CCGE1002 0.02 1755692 1755692 S 2735433 Paraburkholderia sp. PGU16 0.02 1494115 1494115 S 2604047 Paraburkholderia sp. Msb3 0.05 4241837 4241837 S 2026199 Paraburkholderia aromaticivorans 0.04 4021460 2709459 S 75105 Paraburkholderia caribensis 0.01 1312001 1312001 S1 1323664 Paraburkholderia caribensis MBA4 0.04 3631125 5159 S 261302 Paraburkholderia phytofirmans 0.02 2009023 2009023 S1 1417228 Paraburkholderia phytofirmans OLGA172 0.02 1616943 1616943 S1 398527 Paraburkholderia phytofirmans PsJN 0.03 2705456 2705456 S 134537 Paraburkholderia fungorum 0.03 2614365 2614365 S 169430 Paraburkholderia hospita 0.02 2174982 2174982 S 92647 Paraburkholderia tropica 0.02 2134739 2134739 S 420953 Paraburkholderia megapolitana 0.02 2121562 0 S 148447 Paraburkholderia phymatum 0.02 2121562 2121562 S1 391038 Paraburkholderia phymatum STM815 0.02 1954142 1954142 S 1761016 Paraburkholderia caffeinilytica 0.02 1858572 0 S 948107 Paraburkholderia sprentiae 0.02 1858572 1858572 S1 754502 Paraburkholderia sprentiae WSM5005 0.02 1831584 0 S 36873 Paraburkholderia xenovorans 0.02 1831584 1831584 S1 266265 Paraburkholderia xenovorans LB400 0.02 1806842 1806842 S 134536 Paraburkholderia caledonica 0.02 1749830 0 S 252970 Paraburkholderia phenoliruptrix 0.02 1749830 1749830 S1 1229205 Paraburkholderia phenoliruptrix BR3459a 0.02 1738978 1738978 S 60548 Paraburkholderia graminis 0.02 1615141 1615141 S 169427 Paraburkholderia terricola 0.02 1424322 1424322 S 311230 Paraburkholderia terrae 0.01 1053659 1053659 S 2211211 Paraburkholderia dokdonella 0.43 38457443 5386836 G 106589 Cupriavidus 0.10 9117857 8949022 S 164546 Cupriavidus taiwanensis 0.00 168835 168835 S1 977880 Cupriavidus taiwanensis LMG 19424 0.05 4842588 2134339 S 106590 Cupriavidus necator 0.02 1518780 1518780 S1 1042878 Cupriavidus necator N-1 0.01 1189469 1189469 S1 381666 Cupriavidus necator H16 0.04 3411924 3411924 S 96344 Cupriavidus oxalaticus 0.04 3337442 3337442 S 82633 Cupriavidus pauculus 0.03 2991895 2991768 S 119219 Cupriavidus metallidurans 0.00 127 127 S1 266264 Cupriavidus metallidurans CH34 0.03 2257009 2257009 S 68895 Cupriavidus basilensis 0.02 1902087 0 S 248026 Cupriavidus pinatubonensis 0.02 1902087 1902087 S1 264198 Cupriavidus pinatubonensis JMP134 0.02 1718280 1372866 S 82541 Cupriavidus gilardii 0.00 345414 345414 S1 1267562 Cupriavidus gilardii CR3 0.02 1634643 1634643 S 151783 Cupriavidus campinensis 0.01 779102 779102 S 1796606 Cupriavidus nantongensis 0.01 753004 112658 G1 2640874 unclassified Cupriavidus 0.00 389656 389656 S 876364 Cupriavidus sp. USMAA2-4 0.00 250690 250690 S 1389192 Cupriavidus sp. USMAHM13 0.00 299758 299758 S 367825 Cupriavidus malaysiensis 0.00 25018 25018 S 1040979 Cupriavidus neocaledonicus 0.20 17889694 4327890 G 48736 Ralstonia 0.08 7443135 6349496 S 305 Ralstonia solanacearum 0.01 637039 637039 S1 859655 Ralstonia solanacearum CMR15 0.00 125949 125949 S1 859657 Ralstonia solanacearum PSI07 0.00 124729 124729 S1 1394180 Ralstonia solanacearum Rs-09-161 0.00 100107 100107 S1 1457195 Ralstonia solanacearum Rs-10-244 0.00 87228 87228 S1 859656 Ralstonia solanacearum CFBP2957 0.00 12898 12898 S1 1429399 Ralstonia solanacearum OE1-1 0.00 3838 3838 S1 1262456 Ralstonia solanacearum FQY_4 0.00 1002 1002 S1 267608 Ralstonia solanacearum GMI1000 0.00 511 511 S1 1130828 Ralstonia solanacearum FJAT-1458 0.00 323 323 S1 1130829 Ralstonia solanacearum FJAT-91 0.00 15 15 S1 1031711 Ralstonia solanacearum Po82 0.03 2306719 2306719 S 190721 Ralstonia insidiosa 0.03 2268356 855739 S 329 Ralstonia pickettii 0.01 770797 770797 S1 428406 Ralstonia pickettii 12D 0.01 641820 641820 S1 402626 Ralstonia pickettii 12J 0.01 1249173 1249173 S 105219 Ralstonia mannitolilytica 0.00 151204 151204 S 1310165 Ralstonia pseudosolanacearum 0.00 143217 0 G1 209769 unclassified Ralstonia 0.00 143217 143217 S 1944648 blood disease bacterium A2-HR MARDI 0.20 17880710 1037556 G 93217 Pandoraea 0.03 2435182 2348780 S 93220 Pandoraea pnomenusa 0.00 86402 86402 S1 1416914 Pandoraea pnomenusa 3kgm 0.02 1757756 1757756 S 93218 Pandoraea apista 0.02 1667223 1667223 S 93219 Pandoraea norimbergensis 0.02 1524098 1524098 S 93221 Pandoraea pulmonicola 0.02 1444941 1444941 S 656178 Pandoraea vervacti 0.02 1412775 1412775 S 656179 Pandoraea faecigallinarum 0.02 1378212 1378212 S 573737 Pandoraea oxalativorans 0.02 1361707 1361707 S 1891094 Pandoraea fibrosis 0.01 1296616 0 G1 2624094 unclassified Pandoraea 0.01 1296616 1296616 S 2518599 Pandoraea sp. XY-2 0.01 1291428 1291428 S 445709 Pandoraea thiooxydans 0.01 1273216 1273216 S 93222 Pandoraea sputorum 0.12 10617578 128360 G 44013 Polynucleobacter 0.05 4161116 3703404 S 576610 Polynucleobacter necessarius 0.01 457712 457712 S1 452638 Polynucleobacter necessarius STIR1 0.02 1683293 1597866 S 576611 Polynucleobacter asymbioticus 0.00 85427 85427 S1 312153 Polynucleobacter asymbioticus QLW-P1DMWA-1 0.01 1279712 476 G1 2640945 unclassified Polynucleobacter 0.01 661219 661219 S 1743162 Polynucleobacter sp. LimPoW16 0.01 618017 618017 S 1743174 Polynucleobacter sp. MWH-UH21B 0.01 916044 916044 S 2527775 Polynucleobacter paneuropaeus 0.01 650953 650953 S 1743168 Polynucleobacter wuianus 0.01 617549 617549 S 556054 Polynucleobacter difficilis 0.01 594888 594888 S 1835254 Polynucleobacter duraquae 0.01 585663 585663 S 556053 Polynucleobacter acidiphobus 0.03 2938335 0 G 1827195 Caballeronia 0.03 2938335 2292331 G1 2646786 unclassified Caballeronia 0.00 387449 387449 S 2705547 Caballeronia sp. SBC2 0.00 258555 258555 S 2705548 Caballeronia sp. SBC1 0.02 1580527 0 G 240411 Chitinimonas 0.02 1580527 1580527 S 2594795 Chitinimonas arctica 0.02 1353772 47229 G 1810868 Mycoavidus 0.01 779334 779334 S 1553431 Mycoavidus cysteinexigens 0.01 527209 0 G1 2649241 unclassified Mycoavidus 0.01 527209 527209 S 2651972 Mycoavidus sp. B2-EB 0.01 1086428 0 G 2571159 Mycetohabitans 0.01 1086428 0 S 412963 Paraburkholderia rhizoxinica 0.01 1086428 1086428 S1 882378 Paraburkholderia rhizoxinica HKI 454 0.01 1050033 0 G 131079 Limnobacter 0.01 1050033 0 G1 2630203 unclassified Limnobacter 0.01 1050033 1050033 S 2732163 Limnobacter sp. SAORIC-580 0.01 940653 0 G 47670 Lautropia 0.01 940653 940653 S 47671 Lautropia mirabilis 0.01 835412 0 G 2680021 Ephemeroptericola 0.01 835412 835412 S 2268024 Ephemeroptericola cinctiostellae 1.29 116781171 2796244 F 80864 Comamonadaceae 0.30 27264242 988272 G 34072 Variovorax 0.19 17513222 2014354 G1 663243 unclassified Variovorax 0.02 2066455 2066455 S 1034889 Variovorax sp. HW608 0.02 1778332 1778332 S 2762322 Variovorax sp. PAMC26660 0.02 1608146 1608146 S 2126319 Variovorax sp. PMC12 0.02 1588104 1588104 S 207745 Variovorax sp. WDL1 0.02 1581376 1581376 S 434008 Variovorax sp. PBS-H4 0.02 1527249 1527249 S 662548 Variovorax sp. RA8 0.02 1364786 1364786 S 434009 Variovorax sp. PBL-H6 0.01 1326969 1326969 S 2762323 Variovorax sp. PAMC28562 0.01 1143789 1143789 S 1795631 Variovorax sp. PAMC 28711 0.01 842999 842999 S 282217 Variovorax sp. SRS16 0.01 669302 669302 S 434014 Variovorax sp. PBL-E5 0.00 724 724 S 1179817 Variovorax sp. DB1 0.00 319 319 S 1816235 Variovorax sp. PV24 0.00 318 318 S 1816232 Variovorax sp. HW80 0.08 7409327 3172448 S 34073 Variovorax paradoxus 0.02 1516738 1516738 S1 595537 Variovorax paradoxus EPS 0.02 1428294 1428294 S1 1246301 Variovorax paradoxus B4 0.01 1291847 1291847 S1 543728 Variovorax paradoxus S110 0.01 1353421 1353421 S 436515 Variovorax boronicumulans 0.20 17689637 1070194 G 12916 Acidovorax 0.09 8531883 183158 G1 2684926 unclassified Acidovorax 0.02 1401450 1401450 S 2518343 Acidovorax sp. JMULE5 0.02 1358712 1358712 S 2478662 Acidovorax sp. 1608163 0.01 1288681 1288681 S 2743470 Acidovorax sp. 16-35-5 0.01 1262947 1262947 S 358220 Acidovorax sp. KKS102 0.01 1135236 1135236 S 1842533 Acidovorax sp. RAC01 0.01 828117 828117 S 1858609 Acidovorax sp. T1 0.01 810371 810371 S 2714923 Acidovorax sp. HDW3 0.00 263211 263211 S 232721 Acidovorax sp. JS42 0.03 3134661 0 S 80867 Acidovorax avenae 0.03 3134661 2982210 S1 80870 Acidovorax avenae subsp. avenae 0.00 152451 152451 S2 643561 Acidovorax avenae subsp. avenae ATCC 19860 0.02 1813490 1813490 S 553814 Acidovorax carolinensis 0.01 1152237 1152237 S 1926868 Acidovorax monticola 0.01 1005464 1004369 S 80869 Acidovorax citrulli 0.00 1095 1095 S1 397945 Acidovorax citrulli AAC00-1 0.01 759604 759604 S 80868 Acidovorax cattleyae 0.00 222104 0 S 721785 Acidovorax ebreus 0.00 222104 222104 S1 535289 Acidovorax ebreus TPSY 0.15 13388497 1039126 G 283 Comamonas 0.04 3717358 3314691 S 285 Comamonas testosteroni 0.00 395862 395862 S1 1392005 Comamonas testosteroni TK102 0.00 6805 6805 S1 543891 Comamonas testosteroni CNB-1 0.02 1838116 1838116 S 363952 Comamonas thiooxydans 0.02 1358011 1358011 S 1562974 Comamonas piscis 0.01 1325231 1325231 S 160825 Comamonas koreensis 0.01 1280006 1280006 S 1082851 Comamonas serinivorans 0.01 989267 989267 S 225992 Comamonas kerstersii 0.01 970841 970841 S 225991 Comamonas aquatica 0.01 870541 0 G1 2638500 unclassified Comamonas 0.01 855503 855503 S 2597701 Comamonas sp. NLF-7-7 0.00 15038 15038 S 1232667 Comamonas sp. 7D-2 0.13 11770441 750710 G 47420 Hydrogenophaga 0.10 8927197 186807 G1 2610897 unclassified Hydrogenophaga 0.02 1885396 1885396 S 2651974 Hydrogenophaga sp. BPS33 0.02 1448653 1448653 S 2565558 Hydrogenophaga sp. PAMC20947 0.01 1319888 1319888 S 795665 Hydrogenophaga sp. PBC 0.01 1224590 1224590 S 434010 Hydrogenophaga sp. PBL-H3 0.01 1194564 1194564 S 1842537 Hydrogenophaga sp. RAC07 0.01 1113551 1113551 S 2716225 Hydrogenophaga sp. BA0156 0.01 553748 553748 S 2184519 Hydrogenophaga sp. NH-16 0.02 1480227 1480227 S 1763535 Hydrogenophaga crassostreae 0.01 612307 612307 S 47421 Hydrogenophaga pseudoflava 0.10 9301190 15891 G 28065 Rhodoferax 0.03 2685844 2685844 S 2509614 Rhodoferax sediminis 0.02 1609147 1609147 S 1842727 Rhodoferax koreense 0.02 1498923 0 S 192843 Rhodoferax ferrireducens 0.02 1498923 1498923 S1 338969 Rhodoferax ferrireducens T118 0.01 1255273 1255273 S 1484693 Rhodoferax saidenbachensis 0.01 1191595 1191595 S 81479 Rhodoferax antarcticus 0.01 1044517 0 G1 2627954 unclassified Rhodoferax 0.01 1044517 1044517 S 2741720 Rhodoferax sp. BAB1 0.08 6950367 96727 G 238749 Diaphorobacter 0.04 3794026 44828 G1 2649760 unclassified Diaphorobacter 0.02 1821092 1821092 S 2714924 Diaphorobacter sp. HDW4A 0.02 1716093 1716093 S 2714925 Diaphorobacter sp. HDW4B 0.00 212013 212013 S 2735554 Diaphorobacter sp. JS3050 0.02 1428935 1428935 S 1715720 Diaphorobacter ruginosibacter 0.01 1285867 1285867 S 1288495 Diaphorobacter aerolatus 0.00 344812 344812 S 1546149 Diaphorobacter polyhydroxybutyrativorans 0.06 5649609 17072 G 52972 Polaromonas 0.03 2988826 1279787 G1 2638319 unclassified Polaromonas 0.02 1706466 1706466 S 296591 Polaromonas sp. JS666 0.00 1346 1346 S 2082385 Polaromonas sp. Pch-P 0.00 1227 1227 S 2268087 Polaromonas sp. SP1 0.02 1507331 0 S 216465 Polaromonas naphthalenivorans 0.02 1507331 1507331 S1 365044 Polaromonas naphthalenivorans CJ2 0.01 1136380 1136380 S 37448 Polaromonas vacuolata 0.06 5182461 1908906 G 80865 Delftia 0.01 1321318 1321318 S 180282 Delftia tsuruhatensis 0.01 1246829 844550 S 80866 Delftia acidovorans 0.00 402279 402279 S1 398578 Delftia acidovorans SPH-1 0.01 705408 50690 G1 2613839 unclassified Delftia 0.00 374545 374545 S 742013 Delftia sp. Cs1-4 0.00 278180 278180 S 1920191 Delftia sp. HK171 0.00 1993 1993 S 1170710 Delftia sp. KV29 0.03 2406802 0 G 174951 Ramlibacter 0.03 2406802 1353572 S 94132 Ramlibacter tataouinensis 0.01 1053230 1053230 S1 365046 Ramlibacter tataouinensis TTB310 0.02 1929682 0 G 665874 Limnohabitans 0.02 1929682 3612 G1 2626134 unclassified Limnohabitans 0.01 1002244 1002244 S 1678128 Limnohabitans sp. 63ED37-2 0.01 923826 923826 S 1678129 Limnohabitans sp. 103DPR2 0.02 1872828 1133 G 219181 Ottowia 0.01 1064272 1064272 S 2109914 Ottowia oryzae 0.01 807423 0 G1 2645081 unclassified Ottowia 0.01 807423 807423 S 1658672 Ottowia sp. oral taxon 894 0.02 1519441 0 G 364316 Verminephrobacter 0.02 1519441 0 S 364317 Verminephrobacter eiseniae 0.02 1519441 1519441 S1 391735 Verminephrobacter eiseniae EF01-2 0.02 1497429 0 G 201096 Alicycliphilus 0.02 1497429 1116707 S 179636 Alicycliphilus denitrificans 0.00 200898 200898 S1 596154 Alicycliphilus denitrificans K601 0.00 179824 179824 S1 596153 Alicycliphilus denitrificans BC 0.02 1408963 47952 G 2490452 Serpentinomonas 0.01 685994 685994 S 1458426 Serpentinomonas mccroryi 0.01 675017 675017 S 1458425 Serpentinomonas raichei 0.01 1321001 0 G 281915 Curvibacter 0.01 1321001 0 G1 2685271 unclassified Curvibacter 0.01 1321001 1321001 S 1844971 Curvibacter sp. AEP1-3 0.01 1170905 0 G 352450 Simplicispira 0.01 1170905 1170905 S 2109915 Simplicispira suum 0.01 1081211 0 G 232523 Hylemonella 0.01 1081211 1081211 S 80880 Hylemonella gracilis 0.01 911666 0 G 1436289 Candidatus Symbiobacter 0.01 911666 0 S 1436290 Candidatus Symbiobacter mobilis 0.01 911666 911666 S1 946483 Candidatus Symbiobacter mobilis CR 0.01 880749 0 G 1649468 Melaminivora 0.01 880749 0 G1 2641902 unclassified Melaminivora 0.01 880749 880749 S 2109913 Melaminivora sp. SC2-9 0.01 787806 0 G 2678886 Pulveribacter 0.01 787806 787806 S 2116657 Pulveribacter suum 0.87 78411454 687375 F 506 Alcaligenaceae 0.30 27138948 3458982 G 222 Achromobacter 0.10 8667384 7090261 S 85698 Achromobacter xylosoxidans 0.02 1383491 1383491 S1 762376 Achromobacter xylosoxidans A8 0.00 193632 193632 S1 1167634 Achromobacter xylosoxidans NH44784-1996 0.05 4388714 14924 G1 2626865 unclassified Achromobacter 0.02 1503528 1503528 S 1758194 Achromobacter sp. AONIH1 0.02 1477767 1477767 S 2282475 Achromobacter sp. B7 0.02 1392495 1392495 S 1881016 Achromobacter sp. MFA1 R4 0.05 4342466 4342466 S 217203 Achromobacter spanius 0.03 2602943 2602943 S 32002 Achromobacter denitrificans 0.03 2300457 2300457 S 217204 Achromobacter insolitus 0.01 1321804 1321804 S 1353889 Achromobacter pestifer 0.00 56198 56198 S 72557 Achromobacter ruhlandii 0.28 24974237 2570723 G 517 Bordetella 0.05 4830455 2824 G1 2630031 unclassified Bordetella 0.02 2017924 2017924 S 1746199 Bordetella sp. N 0.02 1500858 1500858 S 1697043 Bordetella sp. H567 0.01 1308849 1308849 S 2163011 Bordetella sp. HZ20 0.02 1809239 1809239 S 463025 Bordetella bronchialis 0.02 1708673 1708673 S 103855 Bordetella hinzii 0.02 1694079 1694079 S 463014 Bordetella flabilis 0.02 1675618 1675618 S 1416806 Bordetella genomosp. 8 0.02 1547036 1547036 S 1416803 Bordetella genomosp. 9 0.02 1501141 1501141 S 123899 Bordetella trematum 0.02 1406406 1406406 S 463040 Bordetella genomosp. 13 0.01 1320537 1312333 S 521 Bordetella avium 0.00 8204 8204 S1 360910 Bordetella avium 197N 0.01 1310187 1310187 S 94624 Bordetella petrii 0.01 1108334 1072929 S 518 Bordetella bronchiseptica 0.00 23661 23661 S1 1208658 Bordetella bronchiseptica MO149 0.00 11715 11715 S1 568707 Bordetella bronchiseptica 253 0.00 29 29 S1 257310 Bordetella bronchiseptica RB50 0.01 983413 983155 S 35814 Bordetella holmesii 0.00 231 231 S1 1266729 Bordetella holmesii F627 0.00 27 27 S1 1281885 Bordetella holmesii H558 0.01 939854 939854 S 1331258 Bordetella pseudohinzii 0.00 269039 269039 S 463024 Bordetella genomosp. 6 0.00 160174 71166 S 519 Bordetella parapertussis 0.00 88986 88986 S1 1208660 Bordetella parapertussis Bpp5 0.00 22 22 S1 257311 Bordetella parapertussis 12822 0.00 139329 138692 S 520 Bordetella pertussis 0.00 245 245 S1 743278 Bordetella pertussis B1920 0.00 201 201 S1 257313 Bordetella pertussis Tohama I 0.00 72 72 S1 1403053 Bordetella pertussis 137 0.00 59 59 S1 568706 Bordetella pertussis 18323 0.00 51 51 S1 743277 Bordetella pertussis B1917 0.00 9 9 S1 1017264 Bordetella pertussis CS 0.08 7334583 1215288 G 507 Alcaligenes 0.06 5529294 5529294 S 511 Alcaligenes faecalis 0.01 590001 590001 S 323284 Alcaligenes aquatilis 0.04 3592563 971 G 152267 Pigmentiphaga 0.02 1865692 1865692 S 1940612 Pigmentiphaga aceris 0.02 1725900 0 G1 2626614 unclassified Pigmentiphaga 0.02 1725900 1725900 S 2488560 Pigmentiphaga sp. H8 0.04 3282827 0 G 305976 Pusillimonas 0.04 3282827 5561 G1 2640016 unclassified Pusillimonas 0.01 1196825 1196825 S 1007105 Pusillimonas sp. T7-7 0.01 1075980 1075980 S 2028345 Pusillimonas sp. ye3 0.01 1004461 1004461 S 2716226 Pusillimonas sp. DMV24BSW_D 0.03 2825782 46018 G 290425 Advenella 0.02 1440114 0 S 302406 Advenella mimigardefordensis 0.02 1440114 1440114 S1 1247726 Advenella mimigardefordensis DPN7 0.01 1339650 0 S 310575 Advenella kashmirensis 0.01 1339650 1339650 S1 1036672 Advenella kashmirensis WT001 0.01 1325311 0 G 1921582 Orrella 0.01 1325311 1325311 S 1851544 Orrella dioscoreae 0.01 1166294 0 G 257820 Kerstersia 0.01 1166294 1166294 S 206506 Kerstersia gyiorum 0.01 1103353 14566 G 29574 Taylorella 0.01 599129 598134 S 29575 Taylorella equigenitalis 0.00 995 995 S1 743973 Taylorella equigenitalis ATCC 35865 0.01 489658 0 S 84590 Taylorella asinigenitalis 0.01 489658 489658 S1 1008459 Taylorella asinigenitalis MCE3 0.01 1040561 0 F1 83496 unclassified Alcaligenaceae 0.01 1040561 1040561 S 2593958 Alcaligenaceae bacterium SJ-26 0.01 1028497 0 G 359336 Castellaniella 0.01 1028497 0 S 75697 Castellaniella defragrans 0.01 1028497 1028497 S1 1437824 Castellaniella defragrans 65Phen 0.01 842461 0 G 1100891 Paenalcaligenes 0.01 842461 842461 S 643674 Paenalcaligenes hominis 0.01 763915 0 G 90243 Oligella 0.01 763915 763915 S 90245 Oligella urethralis 0.01 703806 0 G 106146 Pelistega 0.01 703806 0 G1 2652175 unclassified Pelistega 0.01 703806 703806 S 2652177 Pelistega sp. NLN63 0.01 600941 0 G 1472344 Basilea 0.01 600941 0 S 1472345 Basilea psittacipulmonis 0.01 600941 600941 S1 1072685 Basilea psittacipulmonis DSM 24701 0.79 70924275 583447 F 75682 Oxalobacteraceae 0.26 23360055 990240 G 149698 Massilia 0.07 6316085 1467233 G1 2609279 unclassified Massilia 0.02 1762493 1762493 S 1678028 Massilia sp. NR 4-1 0.02 1604502 1604502 S 1707785 Massilia sp. WG5 0.02 1400479 1400479 S 1593482 Massilia sp. YMA4 0.00 41078 41078 S 2709302 Massilia sp. Dwa41.01b 0.00 40300 40300 S 2709303 Massilia sp. Se16.2.3 0.02 2138873 2138873 S 2045208 Massilia violaceinigra 0.02 2014975 2014975 S 1141883 Massilia putida 0.02 1925461 1925461 S 321985 Massilia lutea 0.02 1821556 1821556 S 871742 Massilia flava 0.02 1799317 1799317 S 864828 Massilia umbonata 0.02 1793347 1793347 S 321983 Massilia albidiflava 0.02 1591981 1591981 S 945844 Massilia oculi 0.02 1550554 1550554 S 321984 Massilia plicata 0.02 1417666 1417666 S 2072590 Massilia armeniaca 0.16 13998280 1583151 G 29580 Janthinobacterium 0.08 7133392 93610 G1 2610881 unclassified Janthinobacterium 0.02 1376422 1376422 S 1236179 Janthinobacterium sp. B9-8 0.01 1343248 1343248 S 1644131 Janthinobacterium sp. 1_2014MBL_MicDiv 0.01 1200786 1200786 S 375286 Janthinobacterium sp. Marseille 0.01 1170911 1170911 S 2497863 Janthinobacterium sp. 17J80-10 0.01 999006 999006 S 1938606 Janthinobacterium sp. LM6 0.01 949409 949409 S 2590869 Janthinobacterium sp. SNU WT3 0.03 2744563 1084214 S 55508 Janthinobacterium agaricidamnosum 0.02 1660349 1660349 S1 1349767 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 0.02 1588643 1588643 S 29581 Janthinobacterium lividum 0.01 948531 948531 S 368607 Janthinobacterium svalbardensis 0.14 12530621 533407 G 963 Herbaspirillum 0.03 2630489 1470494 S 80842 Herbaspirillum rubrisubalbicans 0.01 920699 920699 S1 1235827 Herbaspirillum rubrisubalbicans Os34 0.00 239296 239296 S1 1078773 Herbaspirillum rubrisubalbicans M1 0.03 2277867 2274116 S 964 Herbaspirillum seropedicae 0.00 3751 3751 S1 757424 Herbaspirillum seropedicae SmR1 0.02 1577687 0 G1 2624150 unclassified Herbaspirillum 0.02 1577687 1577687 S 2025949 Herbaspirillum sp. meg3 0.02 1400233 1400233 S 92645 Herbaspirillum frisingense 0.02 1396282 1396282 S 863372 Herbaspirillum huttiense 0.02 1380790 1380790 S 2014887 Herbaspirillum robiniae 0.01 1333866 0 S 341045 Herbaspirillum hiltneri 0.01 1333866 1333866 S1 1262470 Herbaspirillum hiltneri N3 0.09 7787160 239973 G 202907 Collimonas 0.03 2953511 2953511 S 279058 Collimonas arenae 0.03 2540942 1504919 S 158899 Collimonas fungivorans 0.01 1036023 1036023 S1 1005048 Collimonas fungivorans Ter331 0.02 2052734 2052734 S 279113 Collimonas pratensis 0.05 4950845 2400 G 401469 Undibacterium 0.04 3461621 676759 G1 2630295 unclassified Undibacterium 0.02 1397774 1397774 S 2058625 Undibacterium sp. YM2 0.02 1387088 1387088 S 2058624 Undibacterium sp. KW1 0.02 1486824 1486824 S 401471 Undibacterium parvum 0.04 3506293 0 G 75654 Duganella 0.04 3506293 1989 G1 2636909 unclassified Duganella 0.02 1864710 1864710 S 2728021 Duganella sp. AF9R3 0.02 1639594 1639594 S 2728020 Duganella sp. GN2-R2 0.02 2100269 8897 G 303379 Herminiimonas 0.01 1116254 1116254 S 1809410 Herminiimonas arsenitoxidans 0.01 975118 975118 S 204773 Herminiimonas arsenicoxydans 0.01 1350474 0 G 1344552 Noviherbaspirillum 0.01 1350474 0 G1 2617509 unclassified Noviherbaspirillum 0.01 1350474 1350474 S 2601898 Noviherbaspirillum sp. UKPF54 0.01 756831 0 G 846 Oxalobacter 0.01 756831 756474 S 847 Oxalobacter formigenes 0.00 357 357 S1 556269 Oxalobacter formigenes OXCC13 0.25 22617937 99727 O1 224471 Burkholderiales genera incertae sedis 0.05 4218526 849413 G 32012 Thiomonas 0.02 1682475 442994 G1 2625466 unclassified Thiomonas 0.01 1238451 1238451 S 1050370 Thiomonas sp. X19 0.00 386 386 S 554131 Thiomonas sp. CB2 0.00 359 359 S 2493107 Thiomonas sp. OC7 0.00 151 151 S 2493108 Thiomonas sp. Bio17B3 0.00 134 134 S 2493109 Thiomonas sp. Sup16B3 0.01 1282751 923941 S 926 Thiomonas intermedia 0.00 358810 358810 S1 75379 Thiomonas intermedia K12 0.00 403887 403887 S 426114 Thiomonas arsenitoxydans 0.02 1897749 412212 G 316612 Methylibium 0.01 818229 0 S 105560 Methylibium petroleiphilum 0.01 818229 818229 S1 420662 Methylibium petroleiphilum PM1 0.01 667308 22831 G1 2633235 unclassified Methylibium 0.01 640715 640715 S 2082386 Methylibium sp. Pch-M 0.00 3507 3507 S 1430884 Methylibium sp. T29 0.00 255 255 S 1437443 Methylibium sp. T29-B 0.02 1880147 1880147 S 413882 [Polyangium] brachysporum 0.02 1809428 0 G 212743 Rhizobacter 0.02 1809428 1809428 S 946333 Rhizobacter gummiphilus 0.02 1735096 0 G 65047 Mitsuaria 0.02 1735096 0 G1 2648776 unclassified Mitsuaria 0.02 1735096 1735096 S 1658665 Mitsuaria sp. 7 0.02 1660952 0 G 93681 Roseateles 0.02 1660952 1660952 S 76731 Roseateles depolymerans 0.02 1605581 0 G 54066 Xylophilus 0.02 1605581 0 G1 2646274 unclassified Xylophilus 0.02 1605581 1605581 S 2697032 Xylophilus sp. KACC 21265 0.02 1506870 0 G 318147 Paucibacter 0.02 1506870 0 G1 2642959 unclassified Paucibacter 0.02 1506870 1506870 S 1768242 Paucibacter sp. KCTC 42545 0.01 1325030 0 G 88 Leptothrix 0.01 1325030 0 S 34029 Leptothrix cholodnii 0.01 1325030 1325030 S1 395495 Leptothrix cholodnii SP-6 0.01 1309309 0 G 28067 Rubrivivax 0.01 1309309 0 S 28068 Rubrivivax gelatinosus 0.01 1309309 1309309 S1 983917 Rubrivivax gelatinosus IL144 0.01 1212786 0 G 92793 Aquabacterium 0.01 1212786 1212786 S 1296669 Aquabacterium olei 0.01 1205226 0 G 644355 Inhella 0.01 1205226 1205226 S 392593 Inhella inkyongensis 0.01 1151510 0 G 34102 Sphaerotilus 0.01 1151510 0 S 34103 Sphaerotilus natans 0.01 1151510 1151510 S1 639200 Sphaerotilus natans subsp. sulfidivorans 0.04 3379909 48 O1 80841 unclassified Burkholderiales 0.02 1577456 1577456 S 864051 Burkholderiales bacterium JOSHI_001 0.01 933227 933227 S 1469502 Burkholderiales bacterium GJ-E10 0.01 869178 869178 S 1834205 Burkholderiales bacterium YL45 0.02 1713741 0 F 995019 Sutterellaceae 0.02 1713741 3204 G 40544 Sutterella 0.01 879116 879116 S 2584944 Sutterella faecalis 0.01 831421 831421 S 2494234 Sutterella megalosphaeroides 0.63 57085770 49560 O 206351 Neisseriales 0.33 29761401 184811 F 481 Neisseriaceae 0.21 18672443 2503020 G 482 Neisseria 0.02 1832134 1406 G1 2623750 unclassified Neisseria 0.01 633509 633509 S 1853276 Neisseria sp. 10022 0.01 613922 613922 S 655307 Neisseria sp. KEM232 0.01 583297 0 S 641148 Neisseria sp. oral taxon 014 0.01 583297 583297 S1 641149 Neisseria sp. oral taxon 014 str. F0314 0.01 1179167 941635 S 495 Neisseria elongata 0.00 237532 237171 S1 88719 Neisseria elongata subsp. glycolytica 0.00 361 361 S2 546263 Neisseria elongata subsp. glycolytica ATCC 29315 0.01 1023173 913156 S 487 Neisseria meningitidis 0.00 35159 495 S1 135720 Neisseria meningitidis serogroup C 0.00 20758 20758 S2 374833 Neisseria meningitidis 053442 0.00 12455 12455 S2 604162 Neisseria meningitidis 8013 0.00 1451 1451 S2 272831 Neisseria meningitidis FAM18 0.00 26361 26361 S1 662598 Neisseria meningitidis alpha14 0.00 11553 11553 S1 935588 Neisseria meningitidis M01-240355 0.00 8591 13 S1 491 Neisseria meningitidis serogroup B 0.00 7331 7331 S2 630588 Neisseria meningitidis alpha710 0.00 962 962 S2 909420 Neisseria meningitidis H44/76 0.00 285 285 S2 122586 Neisseria meningitidis MC58 0.00 6930 6930 S1 1386087 Neisseria meningitidis LNP21362 0.00 6038 6038 S1 942513 Neisseria meningitidis WUE 2594 0.00 4702 4702 S1 935590 Neisseria meningitidis M0579 0.00 4389 60 S1 65699 Neisseria meningitidis serogroup A 0.00 4329 4329 S2 122587 Neisseria meningitidis Z2491 0.00 1943 1943 S1 935591 Neisseria meningitidis M01-240149 0.00 1833 1833 S1 935593 Neisseria meningitidis M04-240196 0.00 1490 1490 S1 935599 Neisseria meningitidis G2136 0.00 771 771 S1 935589 Neisseria meningitidis NZ-05/33 0.00 257 257 S1 1095685 Neisseria meningitidis M7124 0.01 782204 782204 S 326522 Neisseria animaloris 0.01 769309 769309 S 1815583 Neisseria musculi 0.01 738304 738304 S 488 Neisseria mucosa 0.01 720174 720174 S 194197 Neisseria dentiae 0.01 698331 698331 S 640030 Neisseria zalophi 0.01 694746 694746 S 1853278 Neisseria chenwenguii 0.01 678875 678875 S 607712 Neisseria shayeganii 0.01 669078 669078 S 28091 Neisseria weaveri 0.01 646030 646030 S 2666100 Neisseria brasiliensis 0.01 636242 636242 S 267212 Neisseria bacilliformis 0.01 628583 628583 S 492 Neisseria animalis 0.01 616516 616516 S 28449 Neisseria subflava 0.01 615361 615361 S 326523 Neisseria zoodegmatis 0.01 588498 588498 S 607711 Neisseria wadsworthii 0.01 578153 578153 S 493 Neisseria canis 0.01 511095 441589 S 486 Neisseria lactamica 0.00 69506 69506 S1 489653 Neisseria lactamica 020-06 0.01 473280 473280 S 490 Neisseria sicca 0.00 397193 388663 S 485 Neisseria gonorrhoeae 0.00 5440 5440 S1 242231 Neisseria gonorrhoeae FA 1090 0.00 1575 1575 S1 528354 Neisseria gonorrhoeae MS11 0.00 934 934 S1 1247414 Neisseria gonorrhoeae NG-k51.05 0.00 581 581 S1 521006 Neisseria gonorrhoeae NCCP11945 0.00 288985 288985 S 483 Neisseria cinerea 0.00 263798 263798 S 484 Neisseria flavescens 0.00 140194 140194 S 489 Neisseria polysaccharea 0.02 1870973 4 G 59 Vitreoscilla 0.01 1078647 1078647 S 63 Vitreoscilla filiformis 0.01 792322 0 G1 2627922 unclassified Vitreoscilla 0.01 792322 792322 S 96942 Vitreoscilla sp. C1 0.02 1588515 1558 G 32257 Kingella 0.01 875181 875181 S 504 Kingella kingae 0.01 711776 711776 S 505 Kingella oralis 0.02 1583647 144890 G 538 Eikenella 0.01 1002930 1002930 S 539 Eikenella corrodens 0.00 435827 435827 S 2528037 Eikenella exigua 0.01 1279249 0 G 1055692 Chitinolyticbacter 0.01 1279249 1279249 S 682798 Chitinolyticbacter meiyuanensis 0.01 895799 0 G 1654931 Crenobacter 0.01 895799 895799 S 2290923 Crenobacter cavernae 0.01 876826 0 F1 421605 unclassified Neisseriaceae 0.01 876826 876826 S 2052837 Neisseriaceae bacterium DSM 100970 0.01 754348 0 G 1193515 Snodgrassella 0.01 754348 0 S 1196083 Snodgrassella alvi 0.01 754348 754348 S1 1196094 Snodgrassella alvi wkB2 0.01 714225 0 G 194195 Alysiella 0.01 714225 714225 S 194196 Alysiella filiformis 0.01 681435 0 G 71 Simonsiella 0.01 681435 0 S 72 Simonsiella muelleri 0.01 681435 681435 S1 641147 Simonsiella muelleri ATCC 29453 0.01 659130 0 G 334107 Conchiformibius 0.01 659130 659130 S 153493 Conchiformibius steedae 0.30 27274809 140294 F 1499392 Chromobacteriaceae 0.13 12090164 280 F1 90153 Chromobacterium group 0.11 9661995 1714995 G 535 Chromobacterium 0.04 3651008 893907 G1 2641838 unclassified Chromobacterium 0.01 1232236 1232236 S 2059672 Chromobacterium sp. ATCC 53434 0.01 1021669 1021669 S 2605945 Chromobacterium sp. 257-1 0.00 251627 251627 S 2202142 Chromobacterium sp. IIBBL 274-1 0.00 251569 251569 S 2202141 Chromobacterium sp. IIBBL 112-1 0.02 1857222 1857222 S 1108595 Chromobacterium vaccinii 0.02 1715218 1487707 S 536 Chromobacterium violaceum 0.00 227511 227511 S1 243365 Chromobacterium violaceum ATCC 12472 0.00 386430 386430 S 394935 Chromobacterium haemolyticum 0.00 337122 337122 S 1778675 Chromobacterium rhizoryzae 0.03 2427889 10863 G 32014 Iodobacter 0.01 1303648 1303648 S 537 Iodobacter fluviatilis 0.01 1113378 0 G1 235634 unclassified Iodobacter 0.01 1113378 1113378 S 2496266 Iodobacter sp. H11R3 0.05 4727890 419745 G 407217 Aquitalea 0.02 2183018 15289 G1 2628611 unclassified Aquitalea 0.01 1160917 1160917 S 1537400 Aquitalea sp. THG-DN7.12 0.01 1006812 1006812 S 1590041 Aquitalea sp. USM4 0.01 1076292 1076292 S 332411 Aquitalea magnusonii 0.01 1048835 1048835 S 519081 Aquitalea denitrificans 0.02 2202220 17344 G 230666 Chitinibacter 0.01 1104260 1104260 S 1737446 Chitinibacter fontanus 0.01 1080616 0 G1 2619399 unclassified Chitinibacter 0.01 1080616 1080616 S 2739434 Chitinibacter sp. 2T18 0.01 1330288 0 G 168470 Laribacter 0.01 1330288 971798 S 168471 Laribacter hongkongensis 0.00 358490 358490 S1 557598 Laribacter hongkongensis HLHK9 0.01 1191994 0 G 568394 Pseudogulbenkiania 0.01 1191994 0 G1 2642558 unclassified Pseudogulbenkiania 0.01 1191994 1191994 S 748280 Pseudogulbenkiania sp. NH8B 0.01 1181383 0 G 57479 Microvirgula 0.01 1181383 1181383 S 57480 Microvirgula aerodenitrificans 0.01 1164078 0 G 57739 Vogesella 0.01 1164078 0 G1 2684990 unclassified Vogesella 0.01 1164078 1164078 S 1192162 Vogesella sp. LIG4 0.01 1136160 0 G 187 Aquaspirillum 0.01 1136160 0 G1 2620219 unclassified Aquaspirillum 0.01 1136160 1136160 S 1938604 Aquaspirillum sp. LM1 0.01 1062382 0 G 885864 Jeongeupia 0.01 1062382 0 G1 2619593 unclassified Jeongeupia 0.01 1062382 1062382 S 1906741 Jeongeupia sp. USM3 0.01 1047956 0 G 400947 Deefgea 0.01 1047956 0 G1 2649748 unclassified Deefgea 0.01 1047956 1047956 S 2739061 Deefgea sp. D17 0.43 38679306 28742 O 32003 Nitrosomonadales 0.11 9950973 2045 F 206379 Nitrosomonadaceae 0.08 6948478 501012 G 914 Nitrosomonas 0.02 1618119 1630 G1 2609265 unclassified Nitrosomonas 0.01 1121121 1121121 S 261292 Nitrosomonas sp. Is79A3 0.01 494278 494278 S 153948 Nitrosomonas sp. AL212 0.00 1090 1090 S 42353 Nitrosomonas sp. 0.01 1274777 1274777 S 44577 Nitrosomonas ureae 0.01 1190485 1190485 S 44574 Nitrosomonas communis 0.01 838135 0 S 915 Nitrosomonas europaea 0.01 838135 838135 S1 228410 Nitrosomonas europaea ATCC 19718 0.01 823638 0 S 916 Nitrosomonas eutropha 0.01 823638 823638 S1 335283 Nitrosomonas eutropha C91 0.01 702312 702312 S 1444684 Nitrosomonas stercoris 0.03 3000450 6718 G 35798 Nitrosospira 0.01 1010532 1010532 S 1288494 Nitrosospira lacus 0.01 995385 0 S 1231 Nitrosospira multiformis 0.01 995385 995385 S1 323848 Nitrosospira multiformis ATCC 25196 0.01 987815 0 S 35799 Nitrosospira briensis 0.01 987815 987815 S1 1266925 Nitrosospira briensis C-128 0.09 8569030 6070 F 32011 Methylophilaceae 0.03 3042470 168598 G 1679002 Candidatus Methylopumilus 0.01 1082336 1082336 S 2588536 Candidatus Methylopumilus universalis 0.01 795001 795001 S 1581557 Candidatus Methylopumilus planktonicus 0.01 545009 545009 S 1581680 Candidatus Methylopumilus turicensis 0.01 451526 451526 S 2588535 Candidatus Methylopumilus rimovensis 0.02 1755107 1793 G 359407 Methylotenera 0.01 954920 0 S 1055487 Methylotenera versatilis 0.01 954920 954920 S1 666681 Methylotenera versatilis 301 0.01 798394 0 S 359408 Methylotenera mobilis 0.01 798394 798394 S1 583345 Methylotenera mobilis JLW8 0.02 1524943 1923 G 16 Methylophilus 0.01 807544 807544 S 2588534 Methylophilus medardicus 0.01 715476 0 G1 2630143 unclassified Methylophilus 0.01 715476 715476 S 1662285 Methylophilus sp. TWE2 0.02 1369831 467448 G 81682 Methylovorus 0.01 486762 0 S 266009 Methylovorus glucosotrophus 0.01 486762 486762 S1 582744 Methylovorus glucosetrophus SIP3-4 0.00 415621 0 G1 2634027 unclassified Methylovorus 0.00 415621 415621 S 887061 Methylovorus sp. MP688 0.01 870609 0 G 404 Methylobacillus 0.01 870609 0 S 405 Methylobacillus flagellatus 0.01 870609 870609 S1 265072 Methylobacillus flagellatus KT 0.08 7550734 5247 F 90627 Gallionellaceae 0.03 2933284 3966 G 1778653 Sulfuriferula 0.01 1023128 1023128 S 171865 Sulfuriferula plumbiphila 0.01 1020426 1020426 S 2675298 Sulfuriferula nivalis 0.01 885764 0 G1 2637784 unclassified Sulfuriferula 0.01 885764 885764 S 1985873 Sulfuriferula sp. AH1 0.01 985400 0 G 935200 Sulfuricella 0.01 985400 0 S 649841 Sulfuricella denitrificans 0.01 985400 985400 S1 1163617 Sulfuricella denitrificans skB26 0.01 959608 0 G 96 Gallionella 0.01 959608 0 S 370405 Gallionella capsiferriformans 0.01 959608 959608 S1 395494 Gallionella capsiferriformans ES-2 0.01 923283 0 G 453161 Candidatus Nitrotoga 0.01 923283 0 G1 2647919 unclassified Candidatus Nitrotoga 0.01 923283 923283 S 2559597 Candidatus Nitrotoga sp. AM1P 0.01 915296 0 G 314343 Sideroxydans 0.01 915296 0 S 63745 Sideroxydans lithotrophicus 0.01 915296 915296 S1 580332 Sideroxydans lithotrophicus ES-1 0.01 828616 0 G 1443590 Ferriphaselus 0.01 828616 828616 S 1188319 Ferriphaselus amnicola 0.08 6934131 13817 F 2008793 Sterolibacteriaceae 0.02 2240261 31527 G 311181 Denitratisoma 0.01 1225610 1225610 S 311182 Denitratisoma oestradiolicum 0.01 983124 0 G1 2609272 unclassified Denitratisoma 0.01 983124 983124 S 1981880 Denitratisoma sp. DHT3 0.02 1526432 74005 F1 2211107 unclassified Sterolibacteriaceae 0.01 752562 752562 S 2211108 Sterolibacteriaceae bacterium J5B 0.01 699865 699865 S 2496847 Sterolibacteriaceae bacterium M52 0.01 1149239 0 G 378210 Methyloversatilis 0.01 1149239 0 G1 2639971 unclassified Methyloversatilis 0.01 1149239 1149239 S 1842540 Methyloversatilis sp. RAC08 0.01 1112965 0 G 1054211 Sulfuritalea 0.01 1112965 0 S 748811 Sulfuritalea hydrogenivorans 0.01 1112965 1112965 S1 1223802 Sulfuritalea hydrogenivorans sk43H 0.01 891417 0 G 157591 Sterolibacterium 0.01 891417 891417 S 157592 Sterolibacterium denitrificans 0.04 4041675 398363 O1 1660158 unclassified Nitrosomonadales 0.01 1325212 1325212 S 2732067 Nitrosomonadales bacterium 0125_3 0.01 1168846 1168846 S 2732487 Nitrosomonadales bacterium Swamp67 0.01 1149224 1149224 S 2715678 Nitrosomonadales bacterium skT11 0.00 16 16 S 1623449 Methylophilales bacterium MBRSG12 0.00 14 14 S 1623448 Methylophilales bacterium MBRSF5 0.02 1604021 624 F 2008790 Thiobacillaceae 0.01 845135 0 G 919 Thiobacillus 0.01 842183 0 S 36861 Thiobacillus denitrificans 0.01 842183 842183 S1 292415 Thiobacillus denitrificans ATCC 25259 0.00 2952 0 G1 2646513 unclassified Thiobacillus 0.00 2952 2952 S 924 Thiobacillus sp. 0.01 758262 0 G 1938335 Sulfuritortus 0.01 758262 758262 S 1914471 Sulfuritortus calidifontis 0.29 25739925 827615 O 206389 Rhodocyclales 0.20 17742591 193935 F 2008794 Zoogloeaceae 0.13 11789522 100776 G 12960 Azoarcus 0.09 7918371 164794 G1 2629479 unclassified Azoarcus 0.02 1658637 1658637 S 748247 Azoarcus sp. KH32C 0.02 1386108 1386108 S 2027405 Azoarcus sp. DD4 0.01 1349941 1349941 S 198107 Azoarcus sp. CIB 0.01 1238999 1238999 S 356837 Azoarcus sp. DN11 0.01 1219820 1219820 S 2016596 Azoarcus sp. M9-3-2 0.01 900072 900072 S 2067960 Azoarcus sp. SY39 0.03 2345041 2345041 S 41977 Azoarcus communis 0.02 1425334 1425334 S 418699 Azoarcus olearius 0.06 5572749 253118 G 33057 Thauera 0.03 2510049 9132 G1 2609274 unclassified Thauera 0.02 1367446 1367446 S 2005884 Thauera sp. K11 0.01 1133471 1133471 S 85643 Thauera sp. MZ1T 0.01 1110521 1110521 S 1134435 Thauera humireducens 0.01 764823 764823 S 96773 Thauera chlorobenzoica 0.01 744230 0 S 59405 Thauera aromatica 0.01 744230 744230 S1 44139 Thauera aromatica K172 0.00 190008 190008 S 2184083 Thauera hydrothermalis 0.00 186385 0 F1 2080468 unclassified Zoogloeaceae 0.00 186385 186385 S 2080469 Zoogloeaceae bacteirum Par-f-2 0.05 4858044 9938 F 75787 Rhodocyclaceae 0.02 1599650 655846 G 146937 Azospira 0.01 508023 0 G1 2609269 unclassified Azospira 0.01 508023 508023 S 1765049 Azospira sp. I09 0.00 435781 0 S 146939 Dechlorosoma suillum 0.00 435781 435781 S1 640081 Azospira oryzae PS 0.01 1293036 0 G 551759 Aromatoleum 0.01 1293036 0 S 551760 Aromatoleum aromaticum 0.01 1293036 1293036 S1 76114 Aromatoleum aromaticum EbN1 0.01 1011414 0 G 1911577 Oryzomicrobium 0.01 1011414 1011414 S 1735038 Oryzomicrobium terrae 0.01 944006 714985 F1 75788 unclassified Rhodocyclaceae 0.00 172011 172011 S 1898103 Rhodocyclaceae bacterium 0.00 34977 34977 S 1816604 Rhodocyclaceae bacterium ICHIJ1 0.00 22033 22033 S 1816615 Rhodocyclaceae bacterium ICHIAU1 0.03 2311675 0 F 2008795 Azonexaceae 0.03 2311675 15005 G 73029 Dechloromonas 0.01 1338602 0 S 259537 Dechloromonas aromatica 0.01 1338602 1338602 S1 159087 Dechloromonas aromatica RCB 0.01 958068 0 G1 2633351 unclassified Dechloromonas 0.01 958068 958068 S 2231055 Dechloromonas sp. HYN0024 0.05 4395868 159 C1 119066 Betaproteobacteria incertae sedis 0.02 1556394 0 G 327159 Candidatus Accumulibacter 0.02 1556394 0 S 327160 Candidatus Accumulibacter phosphatis 0.02 1556394 1556394 S1 522306 Candidatus Accumulibacter phosphatis clade IIA str. UW-1 0.01 1346471 0 F 2705999 Casimicrobiaceae 0.01 1346471 0 G 2706000 Casimicrobium 0.01 1346471 1346471 S 2591109 Casimicrobium huifangae 0.01 1332225 17571 G 33055 Candidatus Kinetoplastibacterium 0.00 232352 0 S 994692 Candidatus Kinetoplastibacterium desouzaii 0.00 232352 232352 S1 1208919 Candidatus Kinetoplastibacterium desouzaii TCC079E 0.00 229877 229389 S 33056 Candidatus Kinetoplastibacterium crithidii 0.00 264 264 S1 1267577 Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255) 0.00 224 224 S1 1208918 Candidatus Kinetoplastibacterium crithidii TCC036E 0.00 229456 229221 S 233181 Candidatus Kinetoplastibacterium blastocrithidii 0.00 132 132 S1 1208922 Candidatus Kinetoplastibacterium blastocrithidii TCC012E 0.00 103 103 S1 1208923 Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis) 0.00 227675 0 S 994695 Candidatus Kinetoplastibacterium galatii 0.00 227675 227675 S1 1208921 Candidatus Kinetoplastibacterium galatii TCC219 0.00 219814 0 S 994696 Candidatus Kinetoplastibacterium oncopeltii 0.00 219814 219814 S1 1208920 Candidatus Kinetoplastibacterium oncopeltii TCC290E 0.00 175480 175480 S 1576550 Candidatus Kinetoplastibacterium sorsogonicusi 0.00 96821 0 G 1381133 Candidatus Profftella 0.00 96821 96821 S 669502 Candidatus Profftella armatura 0.00 42524 0 G 189384 Candidatus Tremblaya 0.00 42524 42375 S 189385 Candidatus Tremblaya princeps 0.00 79 79 S1 1053648 Candidatus Tremblaya princeps PCVAL 0.00 70 70 S1 891398 Candidatus Tremblaya princeps PCIT 0.00 21274 0 G 1301080 Candidatus Nasuia 0.00 21274 10874 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 10400 10400 S1 1343077 Candidatus Nasuia deltocephalinicola str. NAS-ALF 0.02 1981175 0 C1 33809 unclassified Betaproteobacteria 0.02 1399450 1399450 S 1904640 Betaproteobacteria bacterium GR16-43 0.01 581725 581725 S 543913 beta proteobacterium CB 2.89 261130139 3484 P1 68525 delta/epsilon subdivisions 1.96 177114724 96893 C 28221 Deltaproteobacteria 0.80 72075454 32487 O 29 Myxococcales 0.42 38254941 208112 O1 80811 Cystobacterineae 0.21 19226416 769513 F 31 Myxococcaceae 0.12 11198337 170895 G 32 Myxococcus 0.06 5499302 4474532 S 34 Myxococcus xanthus 0.01 1024770 1024770 S1 246197 Myxococcus xanthus DK 1622 0.03 3071484 0 S 83455 Myxococcus stipitatus 0.03 3071484 3071484 S1 1278073 Myxococcus stipitatus DSM 14675 0.03 2450890 2450890 S 1297742 Myxococcus hansupus 0.00 5766 5766 S 33 Myxococcus fulvus 0.08 7258566 16408 G 83461 Corallococcus 0.05 4638111 2773893 S 184914 Corallococcus coralloides 0.02 1864218 1864218 S1 1144275 Corallococcus coralloides DSM 2259 0.03 2604047 1989878 S 35 Corallococcus macrosporus 0.01 614169 614169 S1 1189310 Myxococcus macrosporus DSM 14697 0.15 13377235 245527 F 39 Archangiaceae 0.04 3673070 0 G 47 Archangium 0.04 3673070 3673070 S 48 Archangium gephyra 0.04 3554132 0 G 42 Cystobacter 0.04 3554132 3554132 S 43 Cystobacter fuscus 0.03 3068419 0 G 40 Stigmatella 0.03 3068419 0 S 41 Stigmatella aurantiaca 0.03 3068419 3068419 S1 378806 Stigmatella aurantiaca DW4/3-1 0.03 2836087 0 G 44 Melittangium 0.03 2836087 0 S 83453 Melittangium boletus 0.03 2836087 2836087 S1 1294270 Melittangium boletus DSM 14713 0.05 4106482 0 F 1524215 Anaeromyxobacteraceae 0.05 4106482 773727 G 161492 Anaeromyxobacter 0.02 1933359 1724 G1 2620896 unclassified Anaeromyxobacter 0.02 1421976 1421976 S 404589 Anaeromyxobacter sp. Fw109-5 0.01 509659 509659 S 447217 Anaeromyxobacter sp. K 0.02 1399396 75934 S 161493 Anaeromyxobacter dehalogenans 0.01 837124 837124 S1 290397 Anaeromyxobacter dehalogenans 2CP-C 0.01 486338 486338 S1 455488 Anaeromyxobacter dehalogenans 2CP-1 0.01 1336696 0 F 1524213 Vulgatibacteraceae 0.01 1336696 0 G 1524214 Vulgatibacter 0.01 1336696 1336696 S 1391653 Vulgatibacter incomptus 0.34 31103030 36269 O1 80812 Sorangiineae 0.22 19755223 13680 F 49 Polyangiaceae 0.17 15683183 0 G 39643 Sorangium 0.17 15683183 10316728 S 56 Sorangium cellulosum 0.03 3072671 3072671 S1 448385 Sorangium cellulosum So ce56 0.03 2293784 2293784 S1 1254432 Sorangium cellulosum So0157-2 0.04 3483967 0 G 50 Chondromyces 0.04 3483967 3483967 S 52 Chondromyces crocatus 0.01 574393 0 G 1882917 Pajaroellobacter 0.01 574393 574393 S 1882918 Pajaroellobacter abortibovis 0.05 4765377 0 O2 215910 Sorangiineae incertae sedis 0.05 4765377 0 G 1649470 Minicystis 0.05 4765377 4765377 S 888845 Minicystis rosea 0.04 3820241 0 F 1524216 Labilitrichaceae 0.04 3820241 0 G 1524217 Labilithrix 0.04 3820241 3820241 S 1391654 Labilithrix luteola 0.03 2725920 0 F 1055686 Sandaracinaceae 0.03 2725920 0 G 1055688 Sandaracinus 0.03 2725920 2725920 S 927083 Sandaracinus amylolyticus 0.03 2684996 0 O1 224462 Nannocystineae 0.03 2684996 0 F 224464 Kofleriaceae 0.03 2684996 0 G 162027 Haliangium 0.03 2684996 0 S 80816 Haliangium ochraceum 0.03 2684996 2684996 S1 502025 Haliangium ochraceum DSM 14365 0.41 36543548 14526 O 213115 Desulfovibrionales 0.37 33576832 125344 F 194924 Desulfovibrionaceae 0.27 24567310 1332504 G 872 Desulfovibrio 0.04 3877052 1048448 G1 2593640 unclassified Desulfovibrio 0.01 1201285 1201285 S 2583823 Desulfovibrio sp. IOR2 0.01 1021071 1021071 S 2666132 Desulfovibrio sp. 86 0.00 225554 225554 S 631220 Desulfovibrio sp. G11 0.00 204956 204956 S 2661839 Desulfovibrio sp. DSM 106783 0.00 175738 175738 S 2661838 Desulfovibrio sp. DSM 107105 0.03 2640192 1164040 S 881 Desulfovibrio vulgaris 0.01 1217187 1217187 S1 883 Desulfovibrio vulgaris str. 'Miyazaki F' 0.00 251135 251135 S1 391774 Desulfovibrio vulgaris DP4 0.00 7623 7623 S1 882 Desulfovibrio vulgaris str. Hildenborough 0.00 207 207 S1 573059 Desulfovibrio vulgaris RCH1 0.02 2206948 981612 S 876 Desulfovibrio desulfuricans 0.01 1103161 1103161 S1 641491 Desulfovibrio desulfuricans ND132 0.00 122175 122175 S1 525146 Desulfovibrio desulfuricans ATCC 27774 0.02 1484146 1484146 S 370038 Desulfovibrio marinus 0.01 1342480 0 S 880 Desulfovibrio salexigens 0.01 1342480 1342480 S1 526222 Desulfovibrio salexigens DSM 2638 0.01 1304197 0 S 63561 Desulfovibrio sulfodismutans 0.01 1304197 1304197 S1 1121464 Desulfovibrio sulfodismutans DSM 3696 0.01 1232671 0 S 345370 Desulfovibrio carbinoliphilus 0.01 1232671 1232671 S1 694327 Desulfovibrio carbinoliphilus subsp. oakridgensis 0.01 1183326 1183326 S 241368 Desulfovibrio ferrophilus 0.01 1167702 0 S 184917 Desulfovibrio magneticus 0.01 1167702 1167702 S1 573370 Desulfovibrio magneticus RS-1 0.01 1165521 0 S 879 Desulfovibrio gigas 0.01 1165521 1165521 S1 1121448 Desulfovibrio gigas DSM 1382 = ATCC 19364 0.01 1141061 0 S 191026 Desulfovibrio hydrothermalis 0.01 1141061 1141061 S1 1121451 Desulfovibrio hydrothermalis AM13 = DSM 14728 0.01 1113805 1113805 S 44742 Desulfovibrio fairfieldensis 0.01 1110993 0 S 58180 Desulfovibrio alaskensis 0.01 1110993 1110993 S1 207559 Desulfovibrio alaskensis G20 0.01 989108 989108 S 296842 Desulfovibrio carbinolicus 0.01 842491 842491 S 901 Desulfovibrio piger 0.00 433113 433113 S 1725232 Candidatus Desulfovibrio trichonymphae 0.08 7080588 44282 G 2035811 Pseudodesulfovibrio 0.03 2461700 3624 G1 2661612 unclassified Pseudodesulfovibrio 0.01 1271979 1271979 S 2725288 Pseudodesulfovibrio sp. zrk46 0.01 1186097 1186097 S 2678688 Pseudodesulfovibrio sp. SRB007 0.01 1224417 1224417 S 57320 Pseudodesulfovibrio profundus 0.01 1140614 1140614 S 1716143 Pseudodesulfovibrio indicus 0.01 1140192 0 S 879567 Pseudodesulfovibrio piezophilus 0.01 1140192 1140192 S1 1322246 Pseudodesulfovibrio piezophilus C1TLV30 0.01 1069383 0 S 182210 Pseudodesulfovibrio aespoeensis 0.01 1069383 1069383 S1 643562 Pseudodesulfovibrio aespoeensis Aspo-2 0.01 1301259 0 G 2582840 Desulfocurvibacter 0.01 1301259 0 S 873 Desulfocurvibacter africanus 0.01 1301259 0 S1 1511600 Desulfocurvibacter africanus subsp. africanus 0.01 1301259 1301259 S2 690850 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay 0.01 502331 0 G 41707 Lawsonia 0.01 502331 502033 S 29546 Lawsonia intracellularis 0.00 172 172 S1 1234378 Lawsonia intracellularis N343 0.00 126 126 S1 363253 Lawsonia intracellularis PHE/MN1-00 0.02 2050101 0 F 213116 Desulfomicrobiaceae 0.02 2050101 2603 G 898 Desulfomicrobium 0.01 1216214 0 S 899 Desulfomicrobium baculatum 0.01 1216214 1216214 S1 525897 Desulfomicrobium baculatum DSM 4028 0.01 831284 0 S 132132 Desulfomicrobium orale 0.01 831284 831284 S1 888061 Desulfomicrobium orale DSM 12838 0.01 902089 0 F 213117 Desulfohalobiaceae 0.01 902089 0 G 45662 Desulfohalobium 0.01 902089 0 S 45663 Desulfohalobium retbaense 0.01 902089 902089 S1 485915 Desulfohalobium retbaense DSM 5692 0.31 27666380 2186 O 213118 Desulfobacterales 0.20 18438608 15644 F 213119 Desulfobacteraceae 0.09 7943395 36541 G 2299 Desulfosarcina 0.04 3445237 1222670 S 83564 Desulfosarcina ovata 0.01 1230527 1230527 S1 885957 Desulfosarcina ovata subsp. sediminis 0.01 992040 992040 S1 2752305 Desulfosarcina ovata subsp. ovata 0.02 2246644 2246644 S 947919 Desulfosarcina widdelii 0.02 2214973 2214973 S 571177 Desulfosarcina alkanivorans 0.03 2655483 56681 G 2289 Desulfobacter 0.02 1469680 1469680 S 2291 Desulfobacter hydrogenophilus 0.01 1129122 0 S 2293 Desulfobacter postgatei 0.01 1129122 1129122 S1 879212 Desulfobacter postgatei 2ac9 0.03 2606628 235 G 896 Desulfococcus 0.02 1377483 1377483 S 897 Desulfococcus multivorans 0.01 1228910 0 S 181663 Desulfococcus oleovorans 0.01 1228910 1228910 S1 96561 Desulfococcus oleovorans Hxd3 0.02 2033630 0 G 218207 Desulfatibacillum 0.02 2033630 2033630 S 218208 Desulfatibacillum aliphaticivorans 0.02 1720160 0 G 2295 Desulfobacterium 0.02 1720160 0 S 2296 Desulfobacterium autotrophicum 0.02 1720160 1720160 S1 177437 Desulfobacterium autotrophicum HRM2 0.02 1463668 0 G 28222 Desulfobacula 0.02 1463668 0 S 28223 Desulfobacula toluolica 0.02 1463668 1463668 S1 651182 Desulfobacula toluolica Tol2 0.10 9225586 2185 F 213121 Desulfobulbaceae 0.04 3856398 0 G 429014 Desulfopila 0.04 3856398 2726 G1 2622240 unclassified Desulfopila 0.02 2106119 2106119 S 2569541 Desulfopila sp. IMCC35005 0.02 1747553 1747553 S 2569540 Desulfopila sp. IMCC35004 0.02 2036331 714 G 893 Desulfobulbus 0.01 1197282 0 S 894 Desulfobulbus propionicus 0.01 1197282 1197282 S1 577650 Desulfobulbus propionicus DSM 2032 0.01 838335 838335 S 1986146 Desulfobulbus oralis 0.01 1252731 0 G 53318 Desulfocapsa 0.01 1252731 0 S 65555 Desulfocapsa sulfexigens 0.01 1252731 1252731 S1 1167006 Desulfocapsa sulfexigens DSM 10523 0.01 1119409 0 G 109168 Desulfotalea 0.01 1119409 0 S 84980 Desulfotalea psychrophila 0.01 1119409 1119409 S1 177439 Desulfotalea psychrophila LSv54 0.01 958532 0 G 427922 Desulfurivibrio 0.01 958532 0 S 427923 Desulfurivibrio alkaliphilus 0.01 958532 958532 S1 589865 Desulfurivibrio alkaliphilus AHT 2 0.28 25299279 27266 O 69541 Desulfuromonadales 0.21 18506836 1879 F 213422 Geobacteraceae 0.19 17393743 774919 G 28231 Geobacter 0.06 5190392 9567 G1 2627627 unclassified Geobacter 0.02 1540948 1540948 S 443143 Geobacter sp. M18 0.01 1247288 1247288 S 1277350 Geobacter sp. DSM 9736 0.01 1246749 1246749 S 2597769 Geobacter sp. FeAm09 0.01 1145840 1145840 S 443144 Geobacter sp. M21 0.02 1883598 1715543 S 35554 Geobacter sulfurreducens 0.00 99415 99415 S1 243231 Geobacter sulfurreducens PCA 0.00 68640 68640 S1 663917 Geobacter sulfurreducens KN400 0.02 1550190 0 S 351604 Geobacter uraniireducens 0.02 1550190 1550190 S1 351605 Geobacter uraniireducens Rf4 0.01 1347521 0 S 1203471 Geobacter daltonii 0.01 1347521 1347521 S1 316067 Geobacter daltonii FRC-32 0.01 1241378 0 S 313985 Geobacter lovleyi 0.01 1241378 1241378 S1 398767 Geobacter lovleyi SZ 0.01 1214900 1214900 S 60035 Geobacter bremensis 0.01 1198917 0 S 28232 Geobacter metallireducens 0.01 1198917 1198917 S1 269799 Geobacter metallireducens GS-15 0.01 1115075 0 S 225194 Geobacter bemidjiensis 0.01 1115075 1115075 S1 404380 Geobacter bemidjiensis Bem 0.01 1068981 1068981 S 345632 Geobacter pickeringii 0.01 807872 807872 S 1340425 Geobacter anodireducens 0.01 1111214 0 G 392332 Geoalkalibacter 0.01 1111214 1111214 S 483547 Geoalkalibacter subterraneus 0.07 6765177 3638 F 213421 Desulfuromonadaceae 0.05 4394137 13165 G 18 Pelobacter 0.01 1267868 0 S 29543 Pelobacter propionicus 0.01 1267868 1267868 S1 338966 Pelobacter propionicus DSM 2379 0.01 1137317 0 S 19 Pelobacter carbinolicus 0.01 1137317 1137317 S1 338963 Pelobacter carbinolicus DSM 2380 0.01 1000762 0 G1 2620299 unclassified Pelobacter 0.01 1000762 1000762 S 1842532 Pelobacter sp. SFB93 0.01 975025 975025 S 29542 Pelobacter acetylenicus 0.03 2367402 3322 G 890 Desulfuromonas 0.01 1202257 1202257 S 1603606 Desulfuromonas soudanensis 0.01 1161823 0 G1 2614637 unclassified Desulfuromonas 0.01 1161823 1161823 S 1823759 Desulfuromonas sp. DDH964 0.07 6636588 260 O 213462 Syntrophobacterales 0.04 4056669 72 F 213468 Syntrophaceae 0.02 2032831 0 G 2357 Desulfomonile 0.02 2032831 0 S 2358 Desulfomonile tiedjei 0.02 2032831 2032831 S1 706587 Desulfomonile tiedjei DSM 6799 0.01 1032036 0 G 60892 Desulfobacca 0.01 1032036 0 S 60893 Desulfobacca acetoxidans 0.01 1032036 1032036 S1 880072 Desulfobacca acetoxidans DSM 11109 0.01 991730 0 G 43773 Syntrophus 0.01 991730 0 S 316277 Syntrophus aciditrophicus 0.01 991730 991730 S1 56780 Syntrophus aciditrophicus SB 0.03 2579659 421 F 213465 Syntrophobacteraceae 0.02 1549592 0 G 29526 Syntrophobacter 0.02 1549592 0 S 119484 Syntrophobacter fumaroxidans 0.02 1549592 1549592 S1 335543 Syntrophobacter fumaroxidans MPOB 0.01 1029646 0 G 361106 Desulfoglaeba 0.01 1029646 0 S 361111 Desulfoglaeba alkanexedens 0.01 1029646 1029646 S1 980445 Desulfoglaeba alkanexedens ALDC 0.07 5948064 300 O 1779134 Bradymonadales 0.04 4059252 2955 F 1779135 Bradymonadaceae 0.03 2477275 0 G 2766927 Persicimonas 0.03 2477275 2477275 S 2292766 Persicimonas caeni 0.02 1579022 0 G 1779136 Bradymonas 0.02 1579022 1579022 S 1548548 Bradymonas sediminis 0.02 1888512 0 O1 2099666 unclassified Bradymonadales 0.02 1888512 1888512 S 2600177 Bradymonadales bacterium V1718 0.01 1094643 0 O 453227 Desulfarculales 0.01 1094643 0 F 453228 Desulfarculaceae 0.01 1094643 0 G 453229 Desulfarculus 0.01 1094643 0 S 453230 Desulfarculus baarsii 0.01 1094643 1094643 S1 644282 Desulfarculus baarsii DSM 2075 0.01 1003624 0 O 213113 Desulfurellales 0.01 1003624 101 F 117942 Desulfurellaceae 0.01 505059 0 G 33001 Desulfurella 0.01 505059 0 S 33002 Desulfurella acetivorans 0.01 505059 505059 S1 694431 Desulfurella acetivorans A63 0.01 498464 0 G 84404 Hippea 0.01 498464 0 S 84405 Hippea maritima 0.01 498464 498464 S1 760142 Hippea maritima DSM 10411 0.01 750251 0 F 1902584 Candidatus Desulfofervidaceae 0.01 750251 0 G 1902583 Candidatus Desulfofervidus 0.01 750251 750251 S 1621989 Candidatus Desulfofervidus auxilii 0.93 84011931 12692 C 29547 Epsilonproteobacteria 0.90 81090389 61038 O 213849 Campylobacterales 0.60 54380409 40672 F 72294 Campylobacteraceae 0.31 27824845 2174215 G 194 Campylobacter 0.04 3408291 253997 G1 2593542 unclassified Campylobacter 0.01 575036 575036 S 2517362 Campylobacter sp. CCUG 57310 0.01 520849 520849 S 1032243 Campylobacter sp. RM6914 0.01 510401 510401 S 1660080 Campylobacter sp. RM16192 0.01 463149 463149 S 2561898 Campylobacter sp. CGEMS 0.00 422172 422172 S 1660073 Campylobacter sp. RM6137 0.00 259948 259948 S 1500960 Campylobacter sp. RM16704 0.00 212626 212626 S 1660074 Campylobacter sp. RM8964 0.00 176287 176287 S 1660076 Campylobacter sp. RM12175 0.00 3120 3120 S 2572074 Campylobacter sp. CFSAN093224 0.00 2655 2655 S 2572069 Campylobacter sp. CFSAN093227 0.00 2333 2333 S 2572050 Campylobacter sp. CFSAN093246 0.00 1650 1650 S 2572075 Campylobacter sp. CFSAN093257 0.00 954 954 S 2572084 Campylobacter sp. CFSAN093238 0.00 882 882 S 2572082 Campylobacter sp. CFSAN093256 0.00 777 777 S 2572085 Campylobacter sp. CFSAN093260 0.00 543 543 S 2572059 Campylobacter sp. CFSAN093241 0.00 540 540 S 2572065 Campylobacter sp. CFSAN093226 0.00 372 372 S 2572083 Campylobacter sp. CFSAN093259 0.02 1482084 1091075 S 199 Campylobacter concisus 0.00 391009 391009 S1 360104 Campylobacter concisus 13826 0.01 1302884 752116 S 201 Campylobacter lari 0.00 203301 154390 S1 488545 Campylobacter lari subsp. concheus 0.00 48911 48911 S2 1031536 Campylobacter lari subsp. concheus LMG 11760 0.00 87907 87907 S1 1453988 Campylobacter lari RM16712 0.00 57538 57538 S1 1388749 Campylobacter lari NCTC 11845 0.00 57358 57358 S1 1453989 Campylobacter lari RM16701 0.00 53411 53411 S1 1388750 Campylobacter lari CCUG 22395 0.00 52308 52308 S1 306263 Campylobacter lari RM2100 0.00 38945 38945 S1 650054 Campylobacter lari subsp. lari 0.01 1203059 1079154 S 197 Campylobacter jejuni 0.00 120662 49730 S1 32022 Campylobacter jejuni subsp. jejuni 0.00 55402 55402 S2 683082 Campylobacter jejuni subsp. jejuni 1336 0.00 4337 4337 S2 478547 Campylobacter jejuni subsp. jejuni CG8421 0.00 4204 4204 S2 1408176 Campylobacter jejuni subsp. jejuni F38011 0.00 1480 1480 S2 567106 Campylobacter jejuni subsp. jejuni IA3902 0.00 1072 1072 S2 718271 Campylobacter jejuni subsp. jejuni S3 0.00 1001 1001 S2 1349827 Campylobacter jejuni subsp. jejuni M129 0.00 857 857 S2 1340842 Campylobacter jejuni subsp. jejuni str. RM3420 0.00 521 521 S2 354242 Campylobacter jejuni subsp. jejuni 81-176 0.00 521 521 S2 1349826 Campylobacter jejuni subsp. jejuni D42a 0.00 376 376 S2 1201032 Campylobacter jejuni subsp. jejuni PT14 0.00 333 333 S2 407148 Campylobacter jejuni subsp. jejuni 81116 0.00 271 271 S2 1383068 Campylobacter jejuni subsp. jejuni 00-2544 0.00 246 246 S2 1295010 Campylobacter jejuni subsp. jejuni R14 0.00 216 216 S2 645464 Campylobacter jejuni subsp. jejuni M1 0.00 80 63 S2 192222 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 0.00 10 10 S3 1211776 Campylobacter jejuni subsp. jejuni NCTC 11168-BN148 0.00 7 7 S3 1385721 Campylobacter jejuni subsp. jejuni NCTC 11168-mcK12E5 0.00 15 15 S2 1380767 Campylobacter jejuni subsp. jejuni 00-2426 0.00 2991 2991 S1 1338035 Campylobacter jejuni 32488 0.00 243 243 S1 1347340 Campylobacter jejuni 4031 0.00 9 9 S1 195099 Campylobacter jejuni RM1221 0.01 1178355 577422 S 196 Campylobacter fetus 0.01 489423 451225 S1 1507806 Campylobacter fetus subsp. testudinum 0.00 38198 38198 S2 1244529 Campylobacter fetus subsp. testudinum Sp3 0.00 60986 30519 S1 32020 Campylobacter fetus subsp. venerealis 0.00 13968 13968 S2 1273266 Campylobacter fetus subsp. venerealis cfvi03/293 0.00 9042 9042 S2 688354 Campylobacter fetus subsp. venerealis str. 84-112 0.00 6930 6930 S2 1093099 Campylobacter fetus subsp. venerealis 97/608 0.00 527 527 S2 983328 Campylobacter fetus subsp. venerealis NCTC 10354 0.00 50524 24905 S1 32019 Campylobacter fetus subsp. fetus 0.00 25335 25335 S2 1240980 Campylobacter fetus subsp. fetus 04/554 0.00 284 284 S2 360106 Campylobacter fetus subsp. fetus 82-40 0.01 1042682 685254 S 195 Campylobacter coli 0.00 293497 293497 S1 1367491 Campylobacter coli 76339 0.00 44021 44021 S1 1183379 Campylobacter coli RM4661 0.00 13405 13405 S1 1183378 Campylobacter coli RM1875 0.00 3697 3697 S1 1273173 Campylobacter coli CVM N29710 0.00 1850 1850 S1 1358410 Campylobacter coli 15-537360 0.00 644 644 S1 1183380 Campylobacter coli RM5611 0.00 314 314 S1 306254 Campylobacter coli RM2228 0.01 1040162 482685 S 198 Campylobacter hyointestinalis 0.00 419289 287621 S1 91353 Campylobacter hyointestinalis subsp. lawsonii 0.00 131668 131668 S2 1031752 Campylobacter hyointestinalis subsp. lawsonii CCUG 27631 0.00 138188 138188 S1 91352 Campylobacter hyointestinalis subsp. hyointestinalis 0.01 1026180 1026180 S 204 Campylobacter showae 0.01 948581 188791 S 1965231 Campylobacter pinnipediorum 0.00 438257 438257 S1 1660067 Campylobacter pinnipediorum subsp. pinnipediorum 0.00 321533 321533 S1 1874362 Campylobacter pinnipediorum subsp. caledonicus 0.01 945317 945287 S 200 Campylobacter curvus 0.00 30 30 S1 360105 Campylobacter curvus 525.92 0.01 889602 711433 S 206 Campylobacter sputorum 0.00 66335 0 S1 593874 Campylobacter sputorum biovar paraureolyticus 0.00 66335 66335 S2 1032066 Campylobacter sputorum bv. paraureolyticus LMG 11764 0.00 63014 62958 S1 32024 Campylobacter sputorum biovar sputorum 0.00 56 56 S2 1031754 Campylobacter sputorum bv. sputorum RM3237 0.00 48820 0 S1 1031919 Campylobacter sputorum biovar faecalis 0.00 48820 48820 S2 1031920 Campylobacter sputorum bv. faecalis CCUG 20703 0.01 810124 649707 S 827 Campylobacter ureolyticus 0.00 160417 160417 S1 1032069 Campylobacter ureolyticus RIGS 9880 0.01 740083 740083 S 1244531 Campylobacter iguaniorum 0.01 686896 686896 S 824 Campylobacter gracilis 0.01 686168 686168 S 75658 Campylobacter lanienae 0.01 685171 510082 S 202 Campylobacter mucosalis 0.00 175089 175089 S1 1032067 Campylobacter mucosalis CCUG 21559 0.01 684917 628344 S 28080 Campylobacter upsaliensis 0.00 56573 56573 S1 1031733 Campylobacter upsaliensis RM3940 0.01 638193 638193 S 203 Campylobacter rectus 0.01 579431 579431 S 1780362 Campylobacter geochelonis 0.01 543167 543167 S 28898 Campylobacter helveticus 0.01 487546 487546 S 2042961 Campylobacter blaseri 0.01 478898 0 S 522485 Campylobacter avium 0.01 478898 478898 S1 522484 Campylobacter avium LMG 24591 0.01 475104 0 S 374106 Campylobacter cuniculorum 0.01 475104 475104 S1 1121267 Campylobacter cuniculorum DSM 23162 = LMG 24588 0.01 472601 472601 S 1448857 Campylobacter corcagiensis 0.00 441526 441526 S 449520 Campylobacter canadensis 0.00 412053 412053 S 260714 Campylobacter insulaenigrae 0.00 409458 0 S 76517 Campylobacter hominis 0.00 409458 409458 S1 360107 Campylobacter hominis ATCC BAA-381 0.00 397957 224645 S 497724 Campylobacter subantarcticus 0.00 93736 93736 S1 1388752 Campylobacter subantarcticus LMG 24377 0.00 79576 79576 S1 1388751 Campylobacter subantarcticus LMG 24374 0.00 341324 341324 S 1813019 Campylobacter hepaticus 0.00 336109 336109 S 2505970 Campylobacter armoricus 0.00 321234 321200 S 1031542 Campylobacter volucris 0.00 34 34 S1 580033 Campylobacter volucris LMG 24379 0.00 310831 0 S 488546 Campylobacter peloridis 0.00 310831 310831 S1 1388753 Campylobacter peloridis LMG 23910 0.00 244642 244642 S 1848766 Campylobacter ornithocola 0.22 20115246 1477083 F1 2321108 Arcobacter group 0.17 15125296 968274 G 28196 Arcobacter 0.02 1497031 1094498 S 28198 Arcobacter cryaerophilus 0.00 327355 327355 S1 1032070 Arcobacter cryaerophilus ATCC 43158 0.00 75178 75178 S1 1032071 Arcobacter cryaerophilus D2610 0.01 1124697 768364 S 28197 Arcobacter butzleri 0.00 143776 143776 S1 1036172 Arcobacter butzleri 7h1h 0.00 128389 128389 S1 888827 Arcobacter butzleri JV22 0.00 84158 84158 S1 944546 Arcobacter butzleri ED-1 0.00 10 10 S1 367737 Arcobacter butzleri RM4018 0.01 936382 936382 S 1904463 Arcobacter lekithochrous 0.01 824782 0 S 28199 Arcobacter nitrofigilis 0.01 824782 824782 S1 572480 Arcobacter nitrofigilis DSM 7299 0.01 771982 771982 S 877500 Arcobacter anaerophilus 0.01 715502 715502 S 1054033 Arcobacter venerupis 0.01 701491 0 S 603050 Arcobacter mytili 0.01 701491 701491 S1 1032238 Arcobacter mytili LMG 24559 0.01 640255 640255 S 1080223 Arcobacter pacificus 0.01 636225 0 S 1032072 Arcobacter molluscorum 0.01 636225 636225 S1 870501 Arcobacter molluscorum LMG 25693 0.01 633230 633230 S 255507 Arcobacter cibarius 0.01 619919 619919 S 197482 Arcobacter halophilus 0.01 557113 0 S 1278212 Arcobacter suis 0.01 557113 557113 S1 663365 Arcobacter suis CECT 7833 0.01 538417 538417 S 913109 Arcobacter ellisii 0.01 523923 523923 S 1355374 Arcobacter lanthieri 0.01 502686 363909 S 28200 Arcobacter skirrowii 0.00 138777 138777 S1 1032239 Arcobacter skirrowii CCUG 10374 0.01 483689 483689 S 1054034 Arcobacter cloacae 0.00 429294 429294 S 505249 Arcobacter marinus 0.00 429188 0 S 708186 Arcobacter trophiarum 0.00 429188 429188 S1 1032241 Arcobacter trophiarum LMG 25534 0.00 426970 426970 S 1315211 Arcobacter aquimarinus 0.00 421615 421615 S 1912871 Arcobacter canalis 0.00 345655 0 S 544718 Arcobacter thereius 0.00 345655 345655 S1 1032240 Arcobacter thereius LMG 24486 0.00 200786 200786 S 2320140 Arcobacter peruensis 0.00 196190 196190 S 873191 Arcobacter defluvii 0.02 1515008 2361 G 2321115 Halarcobacter 0.01 829079 829079 S 1462615 Halarcobacter ebronensis 0.01 683568 683568 S 663364 Halarcobacter bivalviorum 0.01 892978 1655 G 2321111 Aliiarcobacter 0.01 536549 536549 S 1564138 Aliiarcobacter faecis 0.00 354774 354774 S 1935204 [Arcobacter] porcinus 0.01 694648 0 G 2321113 Pseudoarcobacter 0.01 694648 694648 S 1849015 Pseudoarcobacter acticola 0.00 410233 41 F2 2321207 unclassified Arcobacter group 0.00 214062 214062 S 1850254 Arcobacter sp. LPB0137 0.00 196130 196130 S 944547 Arcobacter sp. L 0.07 6399646 366796 G 57665 Sulfurospirillum 0.03 2525963 1392413 G1 2618290 unclassified Sulfurospirillum 0.01 763172 763172 S 1581011 Sulfurospirillum sp. UCH001 0.00 333590 333590 S 220622 Sulfurospirillum sp. JPD-1 0.00 14468 14468 S 1854493 Sulfurospirillum sp. ACSTCE 0.00 14287 14287 S 1854492 Sulfurospirillum sp. ACSDCE 0.00 4570 4570 S 2013514 Sulfurospirillum sp. SL2-2 0.00 3463 3463 S 1986224 Sulfurospirillum sp. SL2-1 0.01 799206 799206 S 366522 Sulfurospirillum cavolei 0.01 732813 0 S 44674 Sulfurospirillum barnesii 0.01 732813 732813 S1 760154 Sulfurospirillum barnesii SES-3 0.01 666510 665803 S 66821 Sulfurospirillum multivorans 0.00 707 707 S1 1150621 Sulfurospirillum multivorans DSM 12446 0.01 665953 0 S 65553 Sulfurospirillum deleyianum 0.01 665953 665953 S1 525898 Sulfurospirillum deleyianum DSM 6946 0.01 642405 0 S 194424 Sulfurospirillum halorespirans 0.01 642405 642405 S1 1193502 Sulfurospirillum halorespirans DSM 13726 0.22 19604883 953 F 72293 Helicobacteraceae 0.21 18942802 366346 G 209 Helicobacter 0.10 8631679 7257414 S 210 Helicobacter pylori 0.00 138221 138221 S1 907239 Helicobacter pylori SouthAfrica7 0.00 87328 87328 S1 1055532 Helicobacter pylori Aklavik86 0.00 51098 51098 S1 907238 Helicobacter pylori India7 0.00 50829 50829 S1 1055530 Helicobacter pylori SNT49 0.00 47332 47332 S1 1055531 Helicobacter pylori Aklavik117 0.00 43137 43137 S1 907240 Helicobacter pylori Gambia94/24 0.00 40945 40945 S1 1321939 Helicobacter pylori UM037 0.00 39896 39896 S1 637913 Helicobacter pylori v225d 0.00 37618 34983 S1 869727 Helicobacter pylori 908 0.00 1380 1380 S2 985080 Helicobacter pylori 2018 0.00 1255 1255 S2 985081 Helicobacter pylori 2017 0.00 37339 37339 S1 1055529 Helicobacter pylori Puno135 0.00 37130 37130 S1 1055528 Helicobacter pylori Puno120 0.00 37041 37041 S1 765963 Helicobacter pylori PeCan4 0.00 32790 32790 S1 907237 Helicobacter pylori Lithuania75 0.00 32083 32083 S1 1163742 Helicobacter pylori PeCan18 0.00 31930 31930 S1 1321940 Helicobacter pylori UM066 0.00 31599 31599 S1 570508 Helicobacter pylori P12 0.00 31295 31295 S1 563041 Helicobacter pylori G27 0.00 30518 30518 S1 1163743 Helicobacter pylori HUP-B14 0.00 30069 30069 S1 357544 Helicobacter pylori HPAG1 0.00 28870 28870 S1 592205 Helicobacter pylori B38 0.00 28779 28779 S1 1426844 Helicobacter pylori NY40 0.00 28503 28503 S1 765962 Helicobacter pylori SJM180 0.00 28070 28070 S1 684950 Helicobacter pylori 52 0.00 27131 27131 S1 290847 Helicobacter pylori 51 0.00 26429 26429 S1 102608 Helicobacter pylori F32 0.00 26268 26268 S1 1055527 Helicobacter pylori ELS37 0.00 25319 25319 S1 1248726 Helicobacter pylori OK310 0.00 24137 24137 S1 585538 Helicobacter pylori 83 0.00 21995 21995 S1 1382922 Helicobacter pylori oki128 0.00 20315 20315 S1 794851 Helicobacter pylori Sat464 0.00 20305 20305 S1 1163739 Helicobacter pylori Shi417 0.00 19789 19789 S1 1248725 Helicobacter pylori OK113 0.00 18224 18224 S1 866345 Helicobacter pylori F30 0.00 18222 18222 S1 102611 Helicobacter pylori J166 0.00 17702 17702 S1 765964 Helicobacter pylori Cuz20 0.00 16934 16934 S1 866346 Helicobacter pylori F57 0.00 16689 16689 S1 512562 Helicobacter pylori Shi470 0.00 16588 16588 S1 1163740 Helicobacter pylori Shi112 0.00 15035 15035 S1 866344 Helicobacter pylori F16 0.00 14359 14359 S1 1163741 Helicobacter pylori Shi169 0.00 8098 8098 S1 1382925 Helicobacter pylori oki673 0.00 6616 6616 S1 1382920 Helicobacter pylori oki102 0.00 5757 5757 S1 1382926 Helicobacter pylori oki828 0.00 5706 5706 S1 1382921 Helicobacter pylori oki112 0.00 5240 5240 S1 1382923 Helicobacter pylori oki154 0.00 5166 5166 S1 1382927 Helicobacter pylori oki898 0.00 4957 4957 S1 1382924 Helicobacter pylori oki422 0.00 3736 3736 S1 85963 Helicobacter pylori J99 0.00 410 410 S1 85962 Helicobacter pylori 26695 0.00 147 65 S1 1391726 Helicobacter pylori 26695-1 0.00 48 48 S2 1391727 Helicobacter pylori 26695-1CL 0.00 34 34 S2 1391728 Helicobacter pylori 26695-1CH 0.00 101 101 S1 1407463 Helicobacter pylori BM012S 0.00 79 79 S1 1234365 Helicobacter pylori Rif1 0.00 78 78 S1 1234600 Helicobacter pylori Rif2 0.00 62 62 S1 1311573 Helicobacter pylori UM032 0.00 60 60 S1 544406 Helicobacter pylori B128 0.00 49 49 S1 693745 Helicobacter pylori B8 0.00 44 44 S1 102617 Helicobacter pylori SS1 0.00 38 38 S1 1407462 Helicobacter pylori BM012A 0.00 34 34 S1 1231719 Helicobacter pylori A45 0.00 18 18 S1 102618 Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 0.00 8 8 S1 1431450 Helicobacter pylori PMSS1 0.01 993018 39371 S 138563 Helicobacter cetorum 0.01 507222 507222 S1 182217 Helicobacter cetorum MIT 00-7128 0.00 446425 446425 S1 1163745 Helicobacter cetorum MIT 99-5656 0.01 810445 799423 S 213 Helicobacter cinaedi 0.00 11022 11022 S1 1172562 Helicobacter cinaedi PAGU611 0.01 725635 725635 S 37372 Helicobacter bilis 0.01 591170 591170 S 29419 Helicobacter canis 0.01 577322 577322 S 104628 Helicobacter suis 0.01 574049 574049 S 135569 Helicobacter apodemus 0.01 543018 0 S 56877 Helicobacter bizzozeronii 0.01 543018 543018 S1 1002804 Helicobacter bizzozeronii CIII-1 0.01 537525 537525 S 1591088 Helicobacter himalayensis 0.01 532008 532008 S 76936 Helicobacter typhlonius 0.01 512952 0 S 214 Helicobacter felis 0.01 512952 512952 S1 936155 Helicobacter felis ATCC 49179 0.01 501429 0 S 35817 Helicobacter heilmannii 0.01 501429 501429 S1 1216962 Helicobacter heilmannii ASB1.4 0.01 494778 0 S 32025 Helicobacter hepaticus 0.01 494778 494778 S1 235279 Helicobacter hepaticus ATCC 51449 0.01 492366 492366 S 35818 Helicobacter pullorum 0.01 460054 460054 S 123841 Helicobacter canadensis 0.01 459085 0 G1 2593540 unclassified Helicobacter 0.01 459085 459085 S 222136 Helicobacter sp. MIT 01-6242 0.01 457575 457516 S 217 Helicobacter mustelae 0.00 59 59 S1 679897 Helicobacter mustelae 12198 0.00 403795 403795 S 45498 Helicobacter cholecystus 0.00 278553 260222 S 212 Helicobacter acinonychis 0.00 18331 18331 S1 382638 Helicobacter acinonychis str. Sheeba 0.01 661128 0 G 843 Wolinella 0.01 661128 660736 S 844 Wolinella succinogenes 0.00 392 392 S1 273121 Wolinella succinogenes DSM 1740 0.06 5036981 526 F 2771471 Thiovulaceae 0.05 4161951 22205 G 202746 Sulfurimonas 0.02 2015177 407400 G1 2623549 unclassified Sulfurimonas 0.01 678894 678894 S 2590022 Sulfurimonas sp. GYSZ_1 0.01 661370 661370 S 2509341 Sulfurimonas sp. NW10 0.00 134848 134848 S 2283483 Sulfurimonas sp. CVO 0.00 132665 132665 S 2590021 Sulfurimonas sp. 1-1N 0.01 874559 0 S 1176482 Sulfurimonas gotlandica 0.01 874559 874559 S1 929558 Sulfurimonas gotlandica GD1 0.01 632575 0 S 39766 Sulfurimonas denitrificans 0.01 632575 632575 S1 326298 Sulfurimonas denitrificans DSM 1251 0.01 617435 0 S 202747 Sulfurimonas autotrophica 0.01 617435 617435 S1 563040 Sulfurimonas autotrophica DSM 16294 0.01 874504 0 G 286130 Sulfuricurvum 0.01 874504 0 S 148813 Sulfuricurvum kujiense 0.01 874504 874504 S1 709032 Sulfuricurvum kujiense DSM 16994 0.02 2007078 320 F 2771472 Sulfurovaceae 0.01 1347935 127229 G 265570 Sulfurovum 0.01 662846 0 G1 2646778 unclassified Sulfurovum 0.01 662846 662846 S 387093 Sulfurovum sp. NBC37-1 0.01 557860 557860 S 206403 Sulfurovum lithotrophicum 0.01 658823 0 G 269260 Nitratifractor 0.01 658823 0 S 269261 Nitratifractor salsuginis 0.01 658823 658823 S1 749222 Nitratifractor salsuginis DSM 16511 0.02 1791674 0 O 235899 Nautiliales 0.02 1791674 6912 F 224467 Nautiliaceae 0.01 913195 16469 G 191291 Nautilia 0.01 466803 0 G1 2632186 unclassified Nautilia 0.01 466803 466803 S 2579250 Nautilia sp. PV-1 0.00 429923 0 S 244787 Nautilia profundicola 0.00 429923 429923 S1 598659 Nautilia profundicola AmH 0.01 483923 0 G 1775691 Cetia 0.01 483923 483923 S 1424653 Cetia pacifica 0.00 387644 0 G 191301 Caminibacter 0.00 387644 0 S 291048 Caminibacter mediatlanticus 0.00 387644 387644 S1 391592 Caminibacter mediatlanticus TB-2 0.01 1117176 0 C1 34035 Epsilonproteobacteria incertae sedis 0.01 1117176 620 G 269258 Nitratiruptor 0.01 562830 0 G1 2624044 unclassified Nitratiruptor 0.01 562830 562830 S 387092 Nitratiruptor sp. SB155-2 0.01 553726 553726 S 2706014 Nitratiruptor labii 0.16 14568568 298 C 1553900 Oligoflexia 0.10 8747622 0 O 213481 Bdellovibrionales 0.10 8747622 0 F 213483 Bdellovibrionaceae 0.10 8747622 16537 G 958 Bdellovibrio 0.05 4336324 2215439 S 959 Bdellovibrio bacteriovorus 0.01 993627 993627 S1 1069642 Bdellovibrio bacteriovorus str. Tiberius 0.01 936225 936225 S1 765869 Bdellovibrio bacteriovorus W 0.00 191033 191033 S1 264462 Bdellovibrio bacteriovorus HD100 0.04 3565020 241069 G1 2633795 unclassified Bdellovibrio 0.01 1244076 1244076 S 2220073 Bdellovibrio sp. NC01 0.01 1065975 1065975 S 2231053 Bdellovibrio sp. ZAP7 0.01 1013900 1013900 S 2748865 Bdellovibrio sp. KM01 0.01 829741 0 S 453816 Bdellovibrio exovorus 0.01 829741 829741 S1 1184267 Bdellovibrio exovorus JSS 0.04 3852496 566 O 2024979 Bacteriovoracales 0.03 2441421 0 F 1652132 Halobacteriovoraceae 0.03 2441421 1072 G 1652133 Halobacteriovorax 0.02 1449333 1072766 S 97084 Halobacteriovorax marinus 0.00 376567 376567 S1 862908 Halobacteriovorax marinus SJ 0.01 991016 0 G1 2639665 unclassified Halobacteriovorax 0.01 991016 991016 S 2109558 Halobacteriovorax sp. BALOs_7 0.02 1410509 0 F 263369 Bacteriovoracaceae 0.02 1410509 0 G 146784 Bacteriovorax 0.02 1410509 1410509 S 960 Bacteriovorax stolpii 0.02 1968152 2578 O 2024973 Silvanigrellales 0.01 1035218 0 O1 2493640 unclassified Silvanigrellales 0.01 1035218 1035218 S 2493639 Silvanigrellales bacterium RF1110005 0.01 930356 0 F 2024974 Silvanigrellaceae 0.01 930356 0 G 2024975 Silvanigrella 0.01 930356 930356 S 1915309 Silvanigrella aquatica 0.06 5622290 0 C 1807140 Acidithiobacillia 0.06 5622290 0 O 225057 Acidithiobacillales 0.06 5622290 0 F 225058 Acidithiobacillaceae 0.06 5622290 896220 G 119977 Acidithiobacillus 0.02 1491686 993475 S 160808 Acidithiobacillus ferrivorans 0.01 498211 498211 S1 743299 Acidithiobacillus ferrivorans SS3 0.01 1222301 934540 S 33059 Acidithiobacillus caldus 0.00 194290 194290 S1 637389 Acidithiobacillus caldus ATCC 51756 0.00 93471 93471 S1 990288 Acidithiobacillus caldus SM-1 0.01 1004311 0 S 930 Acidithiobacillus thiooxidans 0.01 1004311 1004311 S1 637390 Acidithiobacillus thiooxidans ATCC 19377 0.01 795765 655091 S 920 Acidithiobacillus ferrooxidans 0.00 108169 108169 S1 243159 Acidithiobacillus ferrooxidans ATCC 23270 0.00 32505 32505 S1 380394 Acidithiobacillus ferrooxidans ATCC 53993 0.00 124159 124159 S 1232575 Acidithiobacillus ferridurans 0.00 87848 0 G1 2614800 unclassified Acidithiobacillus 0.00 87848 87848 S 2614801 Acidithiobacillus sp. 'AMD consortium' 0.02 1523728 0 C 580370 Zetaproteobacteria 0.02 1523728 0 O 580371 Mariprofundales 0.02 1523728 0 F 580372 Mariprofundaceae 0.02 1523728 8751 G 377315 Mariprofundus 0.01 794886 794886 S 1921086 Mariprofundus aestuarium 0.01 720091 720091 S 1921087 Mariprofundus ferrinatatus 0.01 699990 0 C 2008785 Hydrogenophilalia 0.01 699990 0 O 119069 Hydrogenophilales 0.01 699990 0 F 206349 Hydrogenophilaceae 0.01 699990 0 G 70774 Hydrogenophilus 0.01 699990 699990 S 297 Hydrogenophilus thermoluteolus 0.00 185 0 P1 32045 Proteobacteria incertae sedis 0.00 185 0 P2 45359 unclassified pseudomonads 0.00 185 185 S 47660 Pseudomonas sp. ADP 32.05 2892269224 1838621 D1 1783272 Terrabacteria group 16.45 1484028964 478762 P 201174 Actinobacteria 16.03 1446238557 14141416 C 1760 Actinobacteria 4.45 401816705 0 O 85011 Streptomycetales 4.45 401816705 3179798 F 2062 Streptomycetaceae 4.26 384588252 54596663 G 1883 Streptomyces 1.50 135792830 19378086 G1 2593676 unclassified Streptomyces 0.03 2530596 2530596 S 2136173 Streptomyces sp. So13.3 0.03 2427163 2427163 S 1855352 Streptomyces sp. TLI_053 0.03 2377722 2377722 S 2768066 Streptomyces sp. CRXT-G-22 0.03 2350965 2350965 S 2742137 Streptomyces sp. NA02950 0.03 2313313 2313313 S 2184053 Streptomyces sp. ZFG47 0.02 2232425 2232425 S 2653200 Streptomyces sp. GY16 0.02 2202056 2202056 S 1725411 Streptomyces sp. CdTB01 0.02 2136953 2136953 S 2135430 Streptomyces sp. P3 0.02 2107368 2107368 S 2175864 Streptomyces sp. NHF165 0.02 2074076 2074076 S 2686304 Streptomyces sp. T44 0.02 2052298 2052298 S 2136401 Streptomyces sp. YIM 121038 0.02 2018278 2018278 S 2730915 Streptomyces sp. Z423-1 0.02 2000786 2000786 S 2742136 Streptomyces sp. NA04227 0.02 1984612 1984612 S 2692234 Streptomyces sp. GS7 0.02 1943956 1943956 S 1882757 Streptomyces sp. 3214.6 0.02 1927454 1927454 S 1841249 Streptomyces sp. RTd22 0.02 1911650 1911650 S 2721244 Streptomyces sp. RPA4-2 0.02 1894474 1894474 S 646637 Streptomyces sp. M2 0.02 1872274 1872274 S 2721173 Streptomyces sp. DSM 40868 0.02 1845020 1845020 S 2717324 Streptomyces sp. QMT-12 0.02 1820783 1820783 S 2768068 Streptomyces sp. CRPJ-33 0.02 1812268 1812268 S 1849967 Streptomyces sp. SAT1 0.02 1740411 1740411 S 1938841 Streptomyces sp. 2323.1 0.02 1694430 1694430 S 2684468 Streptomyces sp. QHH-9511 0.02 1691330 1691330 S 2750011 Streptomyces sp. Rer75 0.02 1676978 1676978 S 2662397 Streptomyces sp. QMT-28 0.02 1673335 1673335 S 1736046 Streptomyces sp. SM18 0.02 1662069 1662069 S 2751189 Streptomyces sp. NEAU-sy36 0.02 1660751 1660751 S 2203204 Streptomyces sp. WAC 01438 0.02 1635770 1635770 S 2695266 Streptomyces sp. HM190 0.02 1626308 1626308 S 1442032 Streptomyces sp. Z022 0.02 1617259 1617259 S 2305220 Streptomyces sp. W1SF4 0.02 1595668 1595668 S 862751 Streptomyces sp. SirexAA-E 0.02 1583519 1583519 S 2203205 Streptomyces sp. WAC 01529 0.02 1565443 1565443 S 1264596 Streptomyces sp. SCSIO 3032 0.02 1564200 1564200 S 2721246 Streptomyces sp. S1D4-11 0.02 1541557 1541557 S 2585716 Streptomyces sp. C8S0 0.02 1497301 1497301 S 1262452 Streptomyces sp. 769 0.02 1491224 1491224 S 2676871 Streptomyces sp. Tu 2975 0.02 1457624 1457624 S 2072505 Streptomyces sp. Go-475 0.02 1429492 1429492 S 2705439 Streptomyces sp. S4.7 0.02 1427290 1427290 S 2721243 Streptomyces sp. RLB1-33 0.02 1402520 1402520 S 2684469 Streptomyces sp. SCUT-3 0.02 1391570 1391570 S 1812480 Streptomyces sp. fd1-xmd 0.02 1370453 1370453 S 2714844 Streptomyces sp. JB150 0.01 1345299 1345299 S 2607753 Streptomyces sp. INR7 0.01 1312674 1312674 S 2662065 Streptomyces sp. SYP-A7193 0.01 1297688 1297688 S 2202000 Streptomyces sp. NEAU-S7GS2 0.01 1257807 1257807 S 234612 Streptomyces sp. TN58 0.01 1240305 1240305 S 2721245 Streptomyces sp. RPA4-5 0.01 1225517 1225517 S 2059884 Streptomyces sp. CMB-StM0423 0.01 1196816 1196816 S 2582831 Streptomyces sp. SUK 48 0.01 1195862 1195862 S 2726118 Streptomyces sp. jing01 0.01 1156559 1156559 S 2742130 Streptomyces sp. NA00687 0.01 1135976 1135976 S 1522758 Streptomyces sp. ADI95-16 0.01 1073579 1073579 S 2005885 Streptomyces sp. S063 0.01 1056538 1056538 S 2692233 Streptomyces sp. HF10 0.01 1052659 1052659 S 2083284 Streptomyces sp. CB09001 0.01 1037558 1037558 S 465541 Streptomyces sp. Mg1 0.01 1002363 1002363 S 2763006 Streptomyces sp. AC541 0.01 999665 999665 S 1661694 Streptomyces sp. Tue 6075 0.01 988658 988658 S 1561022 Streptomyces sp. CCM_MD2014 0.01 915426 915426 S 2153485 Streptomyces sp. endophyte_N2 0.01 900448 900448 S 2203210 Streptomyces sp. WAC 06738 0.01 874970 874970 S 444103 Streptomyces sp. CNQ-509 0.01 870605 870605 S 1964449 Streptomyces sp. 3211 0.01 853735 853735 S 1837283 Streptomyces sp. S8 0.01 726104 726104 S 1961713 Streptomyces sp. MOE7 0.01 696486 696486 S 1851167 Streptomyces sp. 11-1-2 0.01 686192 686192 S 2748873 Streptomyces sp. CB04723 0.01 640713 640713 S 1972846 Streptomyces sp. Sge12 0.01 620756 620756 S 1495638 Streptomyces sp. M56 0.01 603511 603511 S 1649184 Streptomyces sp. CFMR 7 0.00 419963 419963 S 1914992 Streptomyces sp. DUT11 0.00 405938 405938 S 355249 Streptomyces sp. Tu6071 0.00 354556 354556 S 2742133 Streptomyces sp. NA02536 0.00 354420 354420 S 1821625 Streptomyces sp. VN1 0.00 321225 321225 S 1984801 Streptomyces sp. CLI2509 0.00 321063 321063 S 2109593 Streptomyces sp. SGAir0924 0.00 297711 297711 S 2094021 Streptomyces sp. WAC00288 0.00 291387 291387 S 2563602 Streptomyces sp. SS52 0.00 286207 286207 S 2487422 Streptomyces sp. WAC06273 0.00 277129 277129 S 2742134 Streptomyces sp. NA03103 0.00 249494 249494 S 2692235 Streptomyces sp. GF20 0.00 234167 234167 S 2420135 Streptomyces sp. S501 0.00 233403 233403 S 1265601 Streptomyces sp. PAMC 26508 0.00 220225 220225 S 1881022 Streptomyces sp. 2114.2 0.00 211507 211507 S 1476754 Streptomyces sp. 604F 0.00 204140 204140 S 2594459 Streptomyces sp. S1A1-7 0.00 202889 202889 S 2305221 Streptomyces sp. KPB2 0.00 174857 174857 S 206662 Streptomyces sp. FR-008 0.00 154970 154970 S 2594462 Streptomyces sp. S1D4-20 0.00 152824 152824 S 2594455 Streptomyces sp. RLB3-17 0.00 136820 136820 S 349971 Streptomyces sp. FR1 0.00 123139 123139 S 1218177 Streptomyces sp. GBA 94-10 0.00 109773 109773 S 1436085 Streptomyces sp. F8 0.00 102985 102985 S 1436084 Streptomyces sp. F12 0.00 102762 102762 S 2594457 Streptomyces sp. RLB3-6 0.00 98464 98464 S 1225337 Streptomyces sp. PVA_94-07 0.00 85011 85011 S 317660 Streptomyces sp. F2 0.00 75839 75839 S 2594454 Streptomyces sp. RLB1-9 0.00 69581 69581 S 2306165 Streptomyces sp. CC0208 0.00 61824 61824 S 2594461 Streptomyces sp. S1D4-14 0.00 52537 52537 S 2594463 Streptomyces sp. S1D4-23 0.00 36076 36076 S 1442159 Streptomyces sp. 14R-10 0.00 32897 32897 S 2099583 Streptomyces sp. ICC1 0.00 30260 30260 S 565560 Streptomyces sp. SM17 0.00 26171 26171 S 2099584 Streptomyces sp. ICC4 0.00 20034 20034 S 682410 Streptomyces sp. W9 0.00 19930 19930 S 1170711 Streptomyces sp. W75 0.00 18514 18514 S 319318 Streptomyces sp. F11 0.00 11770 11770 S 405041 Streptomyces sp. HK1 0.00 9135 9135 S 364102 Streptomyces sp. 44030 0.00 6168 6168 S 364103 Streptomyces sp. 44414 0.00 3797 3797 S 211464 Streptomyces sp. EN27 0.00 3666 3666 S 319426 Streptomyces sp. FQ1 0.00 3358 3358 S 701045 Streptomyces sp. Y27 0.00 2221 2221 S 682314 Streptomyces sp. x3 0.00 2070 2070 S 706422 Streptomyces sp. x4(2010) 0.00 1974 1974 S 2594456 Streptomyces sp. RLB3-5 0.00 1384 1384 S 1187849 Streptomyces sp. X335 0.00 513 513 S 2594460 Streptomyces sp. S1A1-8 0.00 283 283 S 2594453 Streptomyces sp. RLB1-8 0.00 252 252 S 2594458 Streptomyces sp. S1A1-3 0.14 12373337 12369640 S 54571 Streptomyces venezuelae 0.00 3697 3697 S1 953739 Streptomyces venezuelae ATCC 10712 0.07 6522324 243620 G1 629295 Streptomyces griseus group 0.03 2577822 0 G2 1482596 Streptomyces griseus subgroup 0.03 2577822 0 S 1911 Streptomyces griseus 0.03 2577822 1166847 S1 67263 Streptomyces griseus subsp. griseus 0.02 1410975 1410975 S2 455632 Streptomyces griseus subsp. griseus NBRC 13350 0.02 1880115 0 G2 1482558 Streptomyces albovinaceus subgroup 0.02 1880115 1056202 S 1908 Streptomyces globisporus 0.01 823913 823913 S1 1172567 Streptomyces globisporus C-1027 0.02 1490043 0 G2 1482561 Streptomyces anulatus subgroup 0.02 1490043 1490043 S 1892 Streptomyces anulatus 0.00 327542 0 G2 1482566 Streptomyces bacillaris subgroup 0.00 327542 327542 S 68179 Streptomyces bacillaris 0.00 3182 0 G2 1482593 Streptomyces flavovirens subgroup 0.00 3182 3182 S 52258 Streptomyces flavovirens 0.06 5176509 5176509 S 47763 Streptomyces lydicus 0.05 4664469 3173548 S 1969 Streptomyces chartreusis 0.02 1490921 1490921 S1 1079985 Streptomyces chartreusis NRRL 3882 0.04 4046572 4046572 S 1888 Streptomyces albus 0.04 4027907 4026311 S 83656 Streptomyces tsukubensis 0.00 1596 1596 S1 1114943 Streptomyces tsukubensis NRRL18488 0.04 3523361 1853871 S 1912 Streptomyces hygroscopicus 0.01 837634 837634 S1 264445 Streptomyces hygroscopicus subsp. limoneus 0.01 831856 754103 S1 311982 Streptomyces hygroscopicus subsp. jinggangensis 0.00 76920 76920 S2 1133850 Streptomyces hygroscopicus subsp. jinggangensis 5008 0.00 833 833 S2 1203460 Streptomyces hygroscopicus subsp. jinggangensis TL01 0.04 3452184 1534418 S 193462 Streptomyces niveus 0.02 1917766 1917766 S1 1352941 Streptomyces niveus NCIMB 11891 0.04 3300733 3300733 S 67304 Streptomyces griseorubiginosus 0.04 3181645 3181645 S 68270 Streptomyces spectabilis 0.03 3033426 3033426 S 73044 Streptomyces seoulensis 0.03 2990510 0 S 379067 Streptomyces bingchenggensis 0.03 2990510 2990510 S1 749414 Streptomyces bingchenggensis BCW-1 0.03 2363378 2362672 S 1927 Streptomyces rimosus 0.00 706 706 S1 1421017 Streptomyces rimosus R6-500 0.03 2361498 2361498 S 68214 Streptomyces griseochromogenes 0.03 2361477 2361477 S 1901 Streptomyces clavuligerus 0.03 2336822 2336822 S 68570 Streptomyces albulus 0.03 2311649 2311649 S 1893 Streptomyces atratus 0.02 2255250 1493071 S 68202 Streptomyces fulvissimus 0.01 762179 762179 S1 1303692 Streptomyces fulvissimus DSM 40593 0.02 2240911 2240911 S 2496836 Streptomyces cyaneochromogenes 0.02 2226676 2226676 S 1915 Streptomyces lincolnensis 0.02 2208213 2208213 S 2548456 Streptomyces aquilus 0.02 2202695 0 S 1930 Streptomyces scabiei 0.02 2202695 2202695 S1 680198 Streptomyces scabiei 87.22 0.02 2143793 2143793 S 67267 Streptomyces alboflavus 0.02 2109495 0 S 348043 Streptomyces davaonensis 0.02 2109495 2109495 S1 1214101 Streptomyces davaonensis JCM 4913 0.02 2097268 0 S 68246 Streptomyces olivoreticuli 0.02 2097268 2097268 S1 284034 Streptomyces olivoreticuli subsp. olivoreticuli 0.02 2090154 2090154 S 1535768 Streptomyces lunaelactis 0.02 2086153 2086153 S 66871 Streptomyces aureoverticillatus 0.02 2063293 0 S 1898 Streptomyces cacaoi 0.02 2063293 2063293 S1 249586 Streptomyces cacaoi subsp. asoensis 0.02 2054270 2054270 S 2282738 Streptomyces paludis 0.02 2030614 2030614 S 1077946 Streptomyces hundungensis 0.02 2013544 0 S 285450 Streptomyces roseochromogenus 0.02 2013544 0 S1 149682 Streptomyces roseochromogenus subsp. oscitans 0.02 2013544 2013544 S2 1352936 Streptomyces roseochromogenus subsp. oscitans DS 12.976 0.02 1988357 0 S 29303 Streptomyces cattleya 0.02 1988357 1988357 S1 1003195 Streptomyces cattleya NRRL 8057 = DSM 46488 0.02 1985040 0 S 33903 Streptomyces avermitilis 0.02 1985040 1985040 S1 227882 Streptomyces avermitilis MA-4680 = NBRC 14893 0.02 1958791 1958791 S 2049881 Streptomyces dengpaensis 0.02 1953455 1953455 S 1904616 Streptomyces fodineus 0.02 1934382 1934382 S 362257 Streptomyces vietnamensis 0.02 1914560 1914560 S 45398 Streptomyces griseoviridis 0.02 1896194 1896194 S 553510 Streptomyces gilvosporeus 0.02 1874141 1874141 S 1967 Streptomyces kanamyceticus 0.02 1872659 0 S 1950 Streptomyces peucetius 0.02 1872659 0 S1 55158 Streptomyces peucetius subsp. caesius 0.02 1872659 1872659 S2 316280 Streptomyces peucetius subsp. caesius ATCC 27952 0.02 1854682 1854682 S 1940 Streptomyces albireticuli 0.02 1854491 1854491 S 40318 Streptomyces nodosus 0.02 1828392 1435120 S 1889 Streptomyces ambofaciens 0.00 393272 393272 S1 278992 Streptomyces ambofaciens ATCC 23877 0.02 1822032 1822032 S 67296 Streptomyces finlayi 0.02 1818375 1818375 S 173860 Streptomyces rectiverticillatus 0.02 1805696 1805696 S 1355015 Streptomyces pluripotens 0.02 1799039 856 S 1914 Streptomyces lavendulae 0.02 1798183 1798183 S1 58340 Streptomyces lavendulae subsp. lavendulae 0.02 1776561 1776561 S 66425 Streptomyces luteoverticillatus 0.02 1753184 1753184 S 1890 Streptomyces antibioticus 0.02 1750834 1750834 S 2599401 Streptomyces qinzhouensis 0.02 1708786 1708786 S 1616117 Streptomyces formicae 0.02 1684935 1684935 S 28894 Streptomyces nitrosporeus 0.02 1662636 0 S 1038928 Streptomyces xinghaiensis 0.02 1662636 1662636 S1 1038929 Streptomyces xinghaiensis S187 0.02 1635326 1635326 S 68223 Streptomyces katrae 0.02 1633174 1633174 S 1783515 Streptomyces qaidamensis 0.02 1628438 1628438 S 1905 Streptomyces exfoliatus 0.02 1611230 1611230 S 1885 Streptomyces actuosus 0.02 1603253 1603253 S 116188 Streptomyces coeruleorubidus 0.02 1597167 1582407 S 38300 Streptomyces pristinaespiralis 0.00 14760 14760 S1 457429 Streptomyces pristinaespiralis ATCC 25486 0.02 1593585 1593585 S 33899 Streptomyces galilaeus 0.02 1592845 1592845 S 67345 Streptomyces prasinus 0.02 1591592 1591592 S 68209 Streptomyces globosus 0.02 1579767 1579767 S 1960 Streptomyces vinaceus 0.02 1559391 1559391 S 1827580 Streptomyces nigra 0.02 1551786 1551786 S 1977088 Streptomyces ficellus 0.02 1550663 1550663 S 68175 Streptomyces antimycoticus 0.02 1536665 1536665 S 132473 Streptomyces alboniger 0.02 1530369 1530369 S 67305 Streptomyces hawaiiensis 0.02 1504916 1504916 S 36818 Streptomyces subrutilus 0.02 1498877 0 S 42684 Streptomyces collinus 0.02 1498877 1498877 S1 1214242 Streptomyces collinus Tu 365 0.02 1495086 1495086 S 68249 Streptomyces pactum 0.02 1484061 1484061 S 1932 Streptomyces tendae 0.02 1476326 0 S 68280 Streptomyces violaceusniger 0.02 1476326 1476326 S1 653045 Streptomyces violaceusniger Tu 4113 0.02 1467695 1467695 S 2174846 Streptomyces tirandamycinicus 0.02 1463652 1463652 S 408015 Streptomyces xiamenensis 0.02 1453948 1453948 S 1907 Streptomyces glaucescens 0.02 1434093 1434093 S 285570 Streptomyces asterosporus 0.02 1434078 1434078 S 1690221 Streptomyces spongiicola 0.02 1423342 1423342 S 146923 Streptomyces parvulus 0.02 1362254 3440 S 67581 Streptomyces viridosporus 0.02 1358814 1358814 S1 665577 Streptomyces viridosporus T7A 0.01 1342970 1342970 S 1176198 Streptomyces harbinensis 0.01 1309061 0 S 1971 Streptomyces noursei 0.01 1309061 1309061 S1 316284 Streptomyces noursei ATCC 11455 0.01 1279161 1279161 S 53451 Streptomyces rutgersensis 0.01 1087605 1087605 S 58346 Streptomyces platensis 0.01 1057023 1057023 S 1437453 Streptomyces leeuwenhoekii 0.01 1015708 1015708 S 1928 Streptomyces rochei 0.01 939110 0 S 68192 Streptomyces cyaneogriseus 0.01 939110 939110 S1 477245 Streptomyces cyaneogriseus subsp. noncyanogenus 0.01 835246 835246 S 188770 Streptomyces koyangensis 0.01 817629 24649 G1 1477431 Streptomyces albidoflavus group 0.00 341899 249848 S 1902 Streptomyces coelicolor 0.00 92051 92051 S1 100226 Streptomyces coelicolor A3(2) 0.00 284274 284274 S 1886 Streptomyces albidoflavus 0.00 166807 166807 S 42239 Streptomyces sampsonii 0.01 707606 707606 S 1935 Streptomyces violaceoruber 0.01 611312 611312 S 67258 Streptomyces cavourensis 0.01 575079 575079 S 48665 Streptomyces viridifaciens 0.01 525802 525802 S 92644 Streptomyces malaysiensis 0.00 446692 446692 S 75293 Streptomyces autolyticus 0.00 334291 334291 S 68203 Streptomyces fungicidicus 0.00 330650 330650 S 47716 Streptomyces olivaceus 0.00 328142 0 S 1169025 Streptomyces pratensis 0.00 328142 328142 S1 591167 Streptomyces pratensis ATCC 33331 0.00 233628 233628 S 67260 Streptomyces cinereoruber 0.00 232991 1436 S 1906 Streptomyces fradiae 0.00 231555 231555 S1 1319510 Streptomyces fradiae ATCC 10745 = DSM 40063 0.00 221361 139640 S 1916 Streptomyces lividans 0.00 74367 74367 S1 1200984 Streptomyces lividans 1326 0.00 7354 7354 S1 457428 Streptomyces lividans TK24 0.00 181518 181518 S 285473 Streptomyces rubrolavendulae 0.00 107656 107656 S 1642299 Streptomyces alfalfae 0.00 13960 0 S 285530 Streptomyces sviceus 0.00 13960 13960 S1 463191 Streptomyces sviceus ATCC 29083 0.00 11282 11282 S 67381 Streptomyces violascens 0.00 4419 4419 S 39478 Streptomyces laurentii 0.00 3166 3166 S 1923 Streptomyces phaeochromogenes 0.00 2830 2830 S 68242 Streptomyces natalensis 0.00 1930 1930 S 1904 Streptomyces cyaneus 0.09 7900613 261282 G 2063 Kitasatospora 0.05 4078260 7536 G1 2633591 unclassified Kitasatospora 0.03 2302172 2302172 S 2018025 Kitasatospora sp. MMS16-BH015 0.02 1768552 1768552 S 2742135 Kitasatospora sp. NA04385 0.02 1787660 0 S 2066 Kitasatospora setae 0.02 1787660 1787660 S1 452652 Kitasatospora setae KM-6054 0.02 1378901 1378901 S 68173 Kitasatospora albolonga 0.00 394510 394510 S 1894 Kitasatospora aureofaciens 0.07 6148042 6959 G 228398 Streptacidiphilus 0.05 4339490 85556 G1 2643834 unclassified Streptacidiphilus 0.03 2347821 2347821 S 2704468 Streptacidiphilus sp. P02-A3a 0.02 1906113 1906113 S 2705012 Streptacidiphilus sp. PB12-B1b 0.02 1801593 1801593 S 2126346 Streptacidiphilus bronchialis 4.15 374163341 1497978 O 85007 Corynebacteriales 1.89 170343258 7447260 F 1762 Mycobacteriaceae 0.82 74435022 5210448 G 1763 Mycobacterium 0.18 16576476 1262041 G1 2642494 unclassified Mycobacterium 0.02 2082158 2082158 S 212767 Mycobacterium sp. JS623 0.02 1915766 1915766 S 1936029 Mycobacterium sp. MS1601 0.02 1663518 1663518 S 2487344 Mycobacterium sp. DL90 0.02 1569715 1569715 S 2675523 Mycobacterium sp. DL440 0.02 1562459 1562459 S 1545728 Mycobacterium sp. EPa45 0.02 1525646 1525646 S 1682113 Mycobacterium sp. YC-RL4 0.02 1405375 1405375 S 1547487 Mycobacterium sp. ELW1 0.02 1360380 1360380 S 2675524 Mycobacterium sp. DL592 0.01 632258 632258 S 2587868 Mycobacterium sp. THAF192 0.00 415209 415209 S 2051552 Mycobacterium sp. PYR15 0.00 409653 409653 S 1920667 Mycobacterium sp. WY10 0.00 384558 384558 S 189918 Mycobacterium sp. KMS 0.00 316461 316461 S 1561223 Mycobacterium sp. QIA-37 0.00 71279 71279 S 1168287 Mycobacterium sp. MOTT36Y 0.14 12604995 262332 G1 2249310 Mycobacterium simiae complex 0.02 2043526 2043526 S 120959 Mycobacterium kubicae 0.02 1588770 1588770 S 1784 Mycobacterium simiae 0.02 1576800 1576800 S 220927 Mycobacterium saskatchewanense 0.02 1538588 1538588 S 470076 Mycobacterium stomatepiae 0.02 1535046 1535046 S 292462 Mycobacterium florentinum 0.02 1445233 1445233 S 185642 Mycobacterium parmense 0.02 1414694 1414694 S 722731 Mycobacterium shigaense 0.01 1200006 1200006 S 53376 Mycobacterium heidelbergense 0.11 9850586 1481586 G1 120793 Mycobacterium avium complex (MAC) 0.02 1988249 849068 S 1764 Mycobacterium avium 0.01 794579 766717 S1 439334 Mycobacterium avium subsp. hominissuis 0.00 27862 27862 S2 1229671 Mycobacterium avium subsp. hominissuis TH135 0.00 194121 193007 S1 1770 Mycobacterium avium subsp. paratuberculosis 0.00 863 863 S2 1199187 Mycobacterium avium subsp. paratuberculosis MAP4 0.00 251 251 S2 262316 Mycobacterium avium subsp. paratuberculosis K-10 0.00 149485 149485 S1 243243 Mycobacterium avium 104 0.00 996 996 S1 44454 Mycobacterium avium subsp. avium 0.02 1471138 1471138 S 560555 Mycobacterium mantenii 0.01 1281403 0 S 339268 Mycobacterium colombiense 0.01 1281403 1281403 S1 1041522 Mycobacterium colombiense CECT 3035 0.01 1225208 1225208 S 701042 Mycobacterium marseillense 0.01 1014552 1014552 S 222805 Mycobacterium chimaera 0.01 806761 381070 S 1767 Mycobacterium intracellulare 0.00 181917 107190 S1 1203599 Mycobacterium intracellulare subsp. yongonense 0.00 74727 74727 S2 1138871 Mycobacterium intracellulare subsp. yongonense 05-1390 0.00 140854 0 S1 35617 Mycobacterium intracellulare subsp. intracellulare 0.00 140854 140854 S2 1232724 Mycobacterium intracellulare subsp. intracellulare MTCC 9506 0.00 63745 63745 S1 487521 Mycobacterium intracellulare ATCC 13950 0.00 39175 39175 S1 1138382 Mycobacterium intracellulare MOTT-02 0.00 430532 430532 S 64667 Mycobacterium lepraemurium 0.00 151157 151157 S 1138383 Mycobacterium paraintracellulare 0.03 2392682 1148503 G1 77643 Mycobacterium tuberculosis complex 0.01 855181 245742 S 78331 Mycobacterium canettii 0.00 256597 256597 S1 1205674 Mycobacterium canettii CIPT 140070010 0.00 250706 250706 S1 1205677 Mycobacterium canettii CIPT 140070017 0.00 65603 65603 S1 1205675 Mycobacterium canettii CIPT 140070008 0.00 20890 20890 S1 1048245 Mycobacterium canettii CIPT 140010059 0.00 15643 15643 S1 1205676 Mycobacterium canettii CIPT 140060008 0.00 388998 281129 S 1773 Mycobacterium tuberculosis 0.00 24687 12022 S1 1765 Mycobacterium tuberculosis variant bovis 0.00 11408 4950 S2 33892 Mycobacterium tuberculosis variant bovis BCG 0.00 5310 5310 S3 998092 Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743 0.00 697 697 S3 413996 Mycobacterium tuberculosis variant bovis BCG str. Moreau RDJ 0.00 276 276 S3 561275 Mycobacterium tuberculosis variant bovis BCG str. Tokyo 172 0.00 143 143 S3 717522 Mycobacterium tuberculosis variant bovis BCG str. Mexico 0.00 26 26 S3 410289 Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2 0.00 6 6 S3 1206780 Mycobacterium tuberculosis variant bovis BCG str. Korea 1168P 0.00 1257 1257 S2 233413 Mycobacterium tuberculosis variant bovis AF2122/97 0.00 11291 7421 S1 33894 Mycobacterium tuberculosis variant africanum 0.00 3870 3870 S2 572418 Mycobacterium tuberculosis variant africanum GM041182 0.00 5750 5750 S1 115862 Mycobacterium tuberculosis variant caprae 0.00 4894 4894 S1 1306414 Mycobacterium tuberculosis EAI5 0.00 2702 2702 S1 83331 Mycobacterium tuberculosis CDC1551 0.00 1711 1711 S1 1334083 Mycobacterium tuberculosis 1821ADB44 0.00 1674 1674 S1 1334075 Mycobacterium tuberculosis TRS29 0.00 1512 1512 S1 443150 Mycobacterium tuberculosis CCDC5180 0.00 1442 1442 S1 652616 Mycobacterium tuberculosis str. Erdman = ATCC 35801 0.00 1343 1343 S1 1138877 Mycobacterium tuberculosis 7199-99 0.00 1220 1220 S1 1334081 Mycobacterium tuberculosis 1821ADB41 0.00 1219 1219 S1 1334057 Mycobacterium tuberculosis TRS11 0.00 1195 1195 S1 1334047 Mycobacterium tuberculosis TRS1 0.00 1193 1193 S1 747369 Mycobacterium tuberculosis R1207 0.00 1158 1158 S1 1452723 Mycobacterium tuberculosis 18b 0.00 1137 1137 S1 1334067 Mycobacterium tuberculosis TRS21 0.00 1118 1118 S1 1445606 Mycobacterium tuberculosis str. Kurono 0.00 1116 1116 S1 1334052 Mycobacterium tuberculosis TRS6 0.00 1101 1101 S1 1334074 Mycobacterium tuberculosis TRS28 0.00 1078 1078 S1 336982 Mycobacterium tuberculosis F11 0.00 1008 1008 S1 1334084 Mycobacterium tuberculosis 1821ADB45 0.00 1003 1003 S1 1097669 Mycobacterium tuberculosis UT205 0.00 988 988 S1 1334058 Mycobacterium tuberculosis TRS12 0.00 981 981 S1 1249615 Mycobacterium tuberculosis K 0.00 977 977 S1 1334066 Mycobacterium tuberculosis TRS20 0.00 974 974 S1 1334062 Mycobacterium tuberculosis TRS16 0.00 958 958 S1 747368 Mycobacterium tuberculosis X122 0.00 923 923 S1 1352600 Mycobacterium tuberculosis PanR1101 0.00 902 902 S1 1352596 Mycobacterium tuberculosis PanR0908 0.00 892 892 S1 1334079 Mycobacterium tuberculosis 1821ADB38 0.00 884 884 S1 1334054 Mycobacterium tuberculosis TRS8 0.00 874 874 S1 1346773 Mycobacterium tuberculosis PanR0403 0.00 847 847 S1 1334065 Mycobacterium tuberculosis TRS19 0.00 827 827 S1 1334055 Mycobacterium tuberculosis TRS9 0.00 824 824 S1 1334053 Mycobacterium tuberculosis TRS7 0.00 822 822 S1 1334051 Mycobacterium tuberculosis TRS5 0.00 810 810 S1 1334078 Mycobacterium tuberculosis 1821ADB37 0.00 798 798 S1 1334070 Mycobacterium tuberculosis TRS24 0.00 794 794 S1 1010835 Mycobacterium tuberculosis BT2 0.00 790 790 S1 1346774 Mycobacterium tuberculosis PanR0402 0.00 789 789 S1 1344043 Mycobacterium tuberculosis PanR0203 0.00 768 768 S1 1010836 Mycobacterium tuberculosis BT1 0.00 722 722 S1 1352577 Mycobacterium tuberculosis PanR0605 0.00 714 714 S1 1346786 Mycobacterium tuberculosis PanR0305 0.00 697 697 S1 1334050 Mycobacterium tuberculosis TRS4 0.00 668 668 S1 1334071 Mycobacterium tuberculosis TRS25 0.00 661 661 S1 443149 Mycobacterium tuberculosis CCDC5079 0.00 658 658 S1 1334082 Mycobacterium tuberculosis 1821ADB42 0.00 658 658 S1 1352574 Mycobacterium tuberculosis PanR0602 0.00 644 644 S1 1352591 Mycobacterium tuberculosis PanR0902 0.00 638 638 S1 1334072 Mycobacterium tuberculosis TRS26 0.00 633 633 S1 1352578 Mycobacterium tuberculosis PanR0606 0.00 630 630 S1 1352587 Mycobacterium tuberculosis PanR0801 0.00 619 619 S1 1334061 Mycobacterium tuberculosis TRS15 0.00 587 587 S1 707235 Mycobacterium tuberculosis CTRI-2 0.00 565 323 S1 83332 Mycobacterium tuberculosis H37Rv 0.00 151 151 S2 757421 Mycobacterium tuberculosis H37RvLP 0.00 47 47 S2 757419 Mycobacterium tuberculosis H37RvCO 0.00 24 24 S2 757417 Mycobacterium tuberculosis H37RvAE 0.00 15 15 S2 1437856 Mycobacterium tuberculosis H37RvSiena 0.00 5 5 S2 757418 Mycobacterium tuberculosis H37RvMA 0.00 528 528 S1 1346787 Mycobacterium tuberculosis PanR0304 0.00 512 512 S1 395095 Mycobacterium tuberculosis str. Haarlem 0.00 503 503 S1 1010834 Mycobacterium tuberculosis HKBS1 0.00 495 495 S1 1427516 Mycobacterium tuberculosis 49-02 0.00 492 492 S1 1334073 Mycobacterium tuberculosis TRS27 0.00 488 488 S1 1334048 Mycobacterium tuberculosis TRS2 0.00 469 469 S1 1334056 Mycobacterium tuberculosis TRS10 0.00 317 317 S1 1346778 Mycobacterium tuberculosis PanR0315 0.00 288 288 S1 1346776 Mycobacterium tuberculosis PanR0317 0.00 288 288 S1 419947 Mycobacterium tuberculosis H37Ra 0.00 270 270 S1 478435 Mycobacterium tuberculosis KZN 605 0.00 266 266 S1 1334059 Mycobacterium tuberculosis TRS13 0.00 254 254 S1 478434 Mycobacterium tuberculosis KZN 1435 0.00 250 250 S1 1352590 Mycobacterium tuberculosis PanR0805 0.00 234 234 S1 1344048 Mycobacterium tuberculosis PanR0209 0.00 230 230 S1 1346770 Mycobacterium tuberculosis PanR0407 0.00 187 187 S1 1352573 Mycobacterium tuberculosis PanR0601 0.00 182 182 S1 1346781 Mycobacterium tuberculosis PanR0311 0.00 154 154 S1 1341711 Mycobacterium tuberculosis PanR0202 0.00 147 147 S1 478433 Mycobacterium tuberculosis KZN 4207 0.00 147 147 S1 1346765 Mycobacterium tuberculosis PanR0412 0.00 138 138 S1 1334068 Mycobacterium tuberculosis TRS22 0.00 131 131 S1 659019 Mycobacterium tuberculosis W-148 0.00 128 128 S1 1346788 Mycobacterium tuberculosis PanR0301 0.00 125 125 S1 1346784 Mycobacterium tuberculosis PanR0307 0.00 123 123 S1 1352595 Mycobacterium tuberculosis PanR0907 0.00 121 121 S1 1266446 Mycobacterium tuberculosis PanR0704 0.00 121 121 S1 1346777 Mycobacterium tuberculosis PanR0316 0.00 121 121 S1 1334077 Mycobacterium tuberculosis 1821ADB36 0.00 114 114 S1 1346785 Mycobacterium tuberculosis PanR0306 0.00 113 113 S1 1352598 Mycobacterium tuberculosis PanR1006 0.00 103 103 S1 1352589 Mycobacterium tuberculosis PanR0804 0.00 99 99 S1 1344046 Mycobacterium tuberculosis PanR0207 0.00 99 99 S1 1352576 Mycobacterium tuberculosis PanR0604 0.00 96 96 S1 1334076 Mycobacterium tuberculosis 1821ADB35 0.00 92 92 S1 1352571 Mycobacterium tuberculosis PanR0503 0.00 92 92 S1 1334063 Mycobacterium tuberculosis TRS17 0.00 89 89 S1 1346766 Mycobacterium tuberculosis PanR0411 0.00 87 87 S1 1334060 Mycobacterium tuberculosis TRS14 0.00 86 86 S1 1352599 Mycobacterium tuberculosis PanR1007 0.00 83 83 S1 1352583 Mycobacterium tuberculosis PanR0702 0.00 82 82 S1 1346783 Mycobacterium tuberculosis PanR0308 0.00 79 79 S1 1352594 Mycobacterium tuberculosis PanR0906 0.00 76 76 S1 1352588 Mycobacterium tuberculosis PanR0803 0.00 76 76 S1 1344047 Mycobacterium tuberculosis PanR0208 0.00 74 74 S1 1352592 Mycobacterium tuberculosis PanR0903 0.00 74 74 S1 1346771 Mycobacterium tuberculosis PanR0405 0.00 73 73 S1 1352585 Mycobacterium tuberculosis PanR0707 0.00 70 70 S1 1334069 Mycobacterium tuberculosis TRS23 0.00 69 69 S1 1346775 Mycobacterium tuberculosis PanR0401 0.00 68 68 S1 1346782 Mycobacterium tuberculosis PanR0309 0.00 67 67 S1 1262529 Mycobacterium tuberculosis PanR1005 0.00 66 66 S1 1352593 Mycobacterium tuberculosis PanR0904 0.00 64 64 S1 1344044 Mycobacterium tuberculosis PanR0205 0.00 63 63 S1 1352579 Mycobacterium tuberculosis PanR0607 0.00 61 61 S1 1352581 Mycobacterium tuberculosis PanR0610 0.00 61 61 S1 1346780 Mycobacterium tuberculosis PanR0313 0.00 59 59 S1 1352575 Mycobacterium tuberculosis PanR0603 0.00 57 57 S1 747367 Mycobacterium tuberculosis HN878 0.00 56 56 S1 1352570 Mycobacterium tuberculosis PanR0501 0.00 53 53 S1 1346772 Mycobacterium tuberculosis PanR0404 0.00 52 52 S1 882098 Mycobacterium tuberculosis S96-129 0.00 48 48 S1 1352572 Mycobacterium tuberculosis PanR0505 0.00 48 48 S1 663886 Mycobacterium tuberculosis KZN R506 0.00 45 45 S1 882100 Mycobacterium tuberculosis BTB05-559 0.00 44 44 S1 1352597 Mycobacterium tuberculosis PanR0909 0.00 44 44 S1 882099 Mycobacterium tuberculosis BTB05-552 0.00 42 42 S1 1262525 Mycobacterium tuberculosis PanR0201 0.00 38 38 S1 1352582 Mycobacterium tuberculosis PanR0611 0.00 37 37 S1 1352586 Mycobacterium tuberculosis PanR0708 0.00 37 37 S1 1346768 Mycobacterium tuberculosis PanR0409 0.00 35 35 S1 1352584 Mycobacterium tuberculosis PanR0703 0.00 35 35 S1 1344045 Mycobacterium tuberculosis PanR0206 0.00 31 31 S1 663887 Mycobacterium tuberculosis KZN V2475 0.00 18 18 S1 1346767 Mycobacterium tuberculosis PanR0410 0.00 16 16 S1 1334064 Mycobacterium tuberculosis TRS18 0.00 14 14 S1 1334080 Mycobacterium tuberculosis 1821ADB40 0.00 6 6 S1 1262526 Mycobacterium tuberculosis PanR0802 0.00 1 1 S1 1352580 Mycobacterium tuberculosis PanR0609 0.02 2196328 2196328 S 482462 Mycobacterium dioxanotrophicus 0.02 1965687 1965351 S 1768 Mycobacterium kansasii 0.00 336 336 S1 557599 Mycobacterium kansasii ATCC 12478 0.02 1929020 1929020 S 1389713 Mycobacterium paragordonae 0.02 1794061 1794061 S 1778 Mycobacterium gordonae 0.02 1618895 1618895 S 43348 Mycobacterium branderi 0.02 1613538 1613538 S 44010 Mycobacterium conspicuum 0.02 1563618 1563618 S 2094119 Mycobacterium basiliense 0.02 1490994 1490994 S 1775 Mycobacterium cookii 0.02 1438725 1438725 S 1552759 Mycobacterium grossiae 0.02 1379004 1379004 S 39689 Mycobacterium gallinarum 0.01 1319436 1319436 S 1789 Mycobacterium xenopi 0.01 1316226 1316226 S 459858 Mycobacterium noviomagense 0.01 1293570 1293570 S 169765 Mycobacterium lacus 0.01 1171140 0 S 29311 Mycobacterium haemophilum 0.01 1171140 1171140 S1 1202450 Mycobacterium haemophilum DSM 44634 0.01 1169521 1169521 S 590652 Mycobacterium paraseoulense 0.01 1128483 1128483 S 398694 Mycobacterium shinjukuense 0.01 998895 998895 S 386911 Mycobacterium seoulense 0.01 979217 703425 S 1781 Mycobacterium marinum 0.00 228913 228913 S1 216594 Mycobacterium marinum M 0.00 38855 38855 S1 1131442 Mycobacterium marinum E11 0.00 8024 8024 S1 459420 Mycobacterium marinum DL240490 0.01 967982 965922 S 1769 Mycobacterium leprae 0.00 1121 1121 S1 1008298 Mycobacterium leprae Kyoto-2 0.00 476 476 S1 561304 Mycobacterium leprae Br4923 0.00 463 463 S1 272631 Mycobacterium leprae TN 0.00 295001 164096 S 1809 Mycobacterium ulcerans 0.00 126454 126454 S1 1124626 Mycobacterium ulcerans subsp. shinshuense 0.00 4451 4451 S1 362242 Mycobacterium ulcerans Agy99 0.00 85050 0 S 261524 Mycobacterium liflandii 0.00 85050 85050 S1 459424 Mycobacterium liflandii 128FXT 0.00 79154 0 S 265949 Mycobacterium pseudoshottsii 0.00 79154 79154 S1 1136880 Mycobacterium pseudoshottsii JCM 15466 0.00 6290 6290 S 28045 Mycobacterium celatum 0.77 69895893 1916528 G 1866885 Mycolicibacterium 0.04 3208285 3208285 S 1791 Mycolicibacterium aurum 0.03 2740963 2740963 S 758802 Mycolicibacterium litorale 0.03 2670600 2140062 S 1772 Mycolicibacterium smegmatis 0.01 529336 529336 S1 1214915 Mycolicibacterium smegmatis MKD8 0.00 1202 1202 S1 246196 Mycolicibacterium smegmatis MC2 155 0.02 2180953 2180953 S 53462 Mycolicibacterium mageritense 0.02 1984328 1984328 S 258505 Mycolicibacterium fluoranthenivorans 0.02 1787511 1787511 S 134601 Mycolicibacterium goodii 0.02 1777988 1048604 S 1804 Mycolicibacterium gilvum 0.00 384970 384970 S1 350054 Mycolicibacterium gilvum PYR-GCK 0.00 344414 344414 S1 278137 Mycolicibacterium gilvum Spyr1 0.02 1751280 1751280 S 1286181 Mycolicibacterium arabiense 0.02 1747628 1747628 S 39695 Mycolicibacterium tokaiense 0.02 1716975 1716975 S 1534349 Mycolicibacterium helvum 0.02 1697184 0 S 36814 Mycolicibacterium rhodesiae 0.02 1697184 1697184 S1 710685 Mycolicibacterium rhodesiae NBB3 0.02 1692174 1692174 S 39691 Mycolicibacterium moriokaense 0.02 1675087 1675087 S 1286180 Mycolicibacterium sediminis 0.02 1661684 1661684 S 319707 Mycolicibacterium aubagnense 0.02 1659643 1659643 S 117567 Mycolicibacterium frederiksbergense 0.02 1639230 0 S 1800 Mycolicibacterium chubuense 0.02 1639230 1639230 S1 710421 Mycolicibacterium chubuense NBB4 0.02 1625644 1625644 S 28047 Mycolicibacterium confluentis 0.02 1616006 0 S 1810 Mycolicibacterium vaccae 0.02 1616006 1616006 S1 1354275 Mycolicibacterium vaccae 95051 0.02 1615198 0 S 110539 Mycolicibacterium vanbaalenii 0.02 1615198 1615198 S1 350058 Mycolicibacterium vanbaalenii PYR-1 0.02 1610404 1610404 S 212765 Mycolicibacterium madagascariense 0.02 1576789 1576789 S 1766 Mycolicibacterium fortuitum 0.02 1571404 1571404 S 146017 Mycolicibacterium boenickei 0.02 1558247 1558247 S 39692 Mycolicibacterium parafortuitum 0.02 1541388 1541388 S 1431246 Mycolicibacterium anyangense 0.02 1508279 1508279 S 319706 Mycolicibacterium phocaicum 0.02 1495276 1495276 S 216929 Mycolicibacterium psychrotolerans 0.02 1490138 1490138 S 39688 Mycolicibacterium duvalii 0.02 1478991 1478991 S 370526 Mycolicibacterium rutilum 0.02 1468468 1468468 S 36813 Mycolicibacterium pulveris 0.02 1449265 1449265 S 67081 Mycolicibacterium alvei 0.02 1431244 1431244 S 1792 Mycolicibacterium chitae 0.01 1318822 0 S 46351 Mycolicibacterium hassiacum 0.01 1318822 1318822 S1 1122247 Mycolicibacterium hassiacum DSM 44199 0.01 1302601 1302601 S 1249101 Mycolicibacterium celeriflavum 0.01 1302053 1302053 S 1797 Mycolicibacterium thermoresistibile 0.01 1299453 1299453 S 1771 Mycolicibacterium phlei 0.01 1288462 1288462 S 1794 Mycolicibacterium gadium 0.01 1283602 1283602 S 1799 Mycolicibacterium aichiense 0.01 1238048 1238048 S 1534348 Mycolicibacterium sarraceniae 0.01 1214221 1214221 S 444597 Mycolicibacterium insubricum 0.01 1021673 1021673 S 1793 Mycolicibacterium fallax 0.01 995652 995652 S 126673 Mycolicibacterium doricum 0.01 564392 564392 S 39694 Mycolicibacterium poriferae 0.00 386128 386128 S 85693 Mycolicibacterium monacense 0.00 135280 0 G1 2636767 unclassified Mycolicibacterium 0.00 135280 135280 S 1968788 Mycolicibacterium sp. CBMA 213 0.00 724 662 S 1795 Mycolicibacterium neoaurum 0.00 62 62 S1 700508 Mycolicibacterium neoaurum VKM Ac-1815D 0.12 11146839 468216 G 670516 Mycobacteroides 0.05 4633471 4249496 S 36809 Mycobacteroides abscessus 0.00 198656 67 S1 319705 Mycobacteroides abscessus subsp. bolletii 0.00 174989 174989 S2 1091046 Mycobacteroides abscessus subsp. bolletii BD 0.00 23585 23585 S2 1303024 Mycobacteroides abscessus subsp. bolletii 50594 0.00 15 15 S2 1087469 Mycobacteroides abscessus subsp. bolletii INCQS 00594 0.00 101830 57934 S1 1962118 Mycobacteroides abscessus subsp. massiliense 0.00 43666 43666 S2 1001714 Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300 0.00 230 230 S2 1198627 Mycobacteroides abscessus subsp. massiliense str. GO 06 0.00 83431 83431 S1 1132508 Mycobacteroides abscessus UC22 0.00 58 58 S1 561007 Mycobacteroides abscessus ATCC 19977 0.02 1471580 1471580 S 83262 Mycobacteroides immunogenum 0.01 1255479 1255479 S 404941 Mycobacteroides salmoniphilum 0.01 1210821 1210821 S 1578165 Mycobacteroides saopaulense 0.01 1161320 828185 S 1774 Mycobacteroides chelonae 0.00 332846 332846 S1 2480908 [Mycobacterium] chelonae subsp. gwanakae 0.00 232 232 S1 2099321 [Mycobacterium] chelonae subsp. chelonae 0.00 57 57 S1 1460372 Mycobacteroides chelonae CCUG 47445 0.01 945952 945952 S 1520670 [Mycobacterium] stephanolepidis 0.05 4786347 115728 G 1073531 Mycolicibacter 0.01 1202824 1202824 S 875328 Mycolicibacter sinensis 0.01 1165123 1165123 S 29314 Mycolicibacter hiberniae 0.01 1158002 1158002 S 1118379 Mycolicibacter minnesotensis 0.01 1144670 1144670 S 1788 Mycolicibacter terrae 0.02 1526713 0 G 697025 Hoyosella 0.02 1526713 0 S 639313 Hoyosella subflava 0.02 1526713 1526713 S1 443218 Hoyosella subflava DQS3-9A1 0.01 1105184 0 G 2126281 Mycolicibacillus 0.01 1105184 1105184 S 1069220 Mycolicibacillus koreensis 1.08 97002870 186392 F 85025 Nocardiaceae 0.62 56096400 11167079 G 1827 Rhodococcus 0.24 22066302 2708209 G1 192944 unclassified Rhodococcus 0.02 1770431 1770431 S 1302308 Rhodococcus sp. P1Y 0.02 1596269 1596269 S 1805827 Rhodococcus sp. MTM3W5.2 0.02 1544331 1544331 S 2742603 Rhodococcus sp. W8901 0.02 1439826 1439826 S 2507582 Rhodococcus sp. ABRD24 0.02 1436725 1436725 S 2663121 Rhodococcus sp. WAY2 0.02 1431811 1431811 S 1564114 Rhodococcus sp. B7740 0.01 1351797 1351797 S 1990687 Rhodococcus sp. S2-17 0.01 1313376 1313376 S 679318 Rhodococcus sp. WMMA185 0.01 1309834 1309834 S 2567884 Rhodococcus sp. SGAir0479 0.01 1203768 1203768 S 1653478 Rhodococcus sp. PBTS 1 0.01 1041007 1041007 S 2499145 Rhodococcus sp. X156 0.01 626059 626059 S 1653479 Rhodococcus sp. PBTS 2 0.01 594809 594809 S 2594007 Rhodococcus sp. WB9 0.00 381700 381700 S 2722825 Rhodococcus sp. DMU1 0.00 323692 323692 S 1045808 Rhodococcus sp. YL-1 0.00 303498 303498 S 1723645 Rhodococcus sp. 008 0.00 284751 284751 S 1570939 Rhodococcus sp. 2G 0.00 276306 276306 S 2054902 Rhodococcus sp. AQ5-07 0.00 268189 268189 S 1807790 Rhodococcus sp. BH4 0.00 266916 266916 S 2490853 Rhodococcus sp. NJ-530 0.00 207016 207016 S 935199 Rhodococcus sp. p52 0.00 204700 204700 S 1727214 Rhodococcus sp. H-CA8f 0.00 158169 158169 S 1033922 Rhodococcus sp. WB1 0.00 21437 21437 S 402236 Rhodococcus sp. NS1 0.00 1509 1509 S 233067 Rhodococcus sp. B264-1 0.00 88 88 S 2565561 Rhodococcus sp. PAMC28705 0.00 79 79 S 2565560 Rhodococcus sp. PAMC28707 0.05 4774396 2733994 S 37919 Rhodococcus opacus 0.02 2040402 2040402 S1 632772 Rhodococcus opacus B4 0.04 3326253 675361 S 1828 Rhodococcus fascians 0.01 997766 997766 S1 1443893 Rhodococcus fascians A21d2 0.01 968990 968990 S1 1443894 Rhodococcus fascians A25f 0.01 684136 684136 S1 1051973 Rhodococcus fascians D188 0.02 2231101 2231101 S 1829 Rhodococcus rhodochrous 0.02 2175266 1868414 S 43767 Rhodococcus hoagii 0.00 192307 192307 S1 525370 Rhodococcus hoagii ATCC 33707 0.00 114545 114545 S1 685727 Rhodococcus hoagii 103S 0.02 2041275 2041275 S 1830 Rhodococcus ruber 0.02 1624269 0 S 132919 Rhodococcus jostii 0.02 1624269 1624269 S1 101510 Rhodococcus jostii RHA1 0.02 1603114 949854 S 1833 Rhodococcus erythropolis 0.00 267550 267550 S1 1289591 Rhodococcus erythropolis R138 0.00 252991 252991 S1 234621 Rhodococcus erythropolis PR4 0.00 132719 132719 S1 1136179 Rhodococcus erythropolis CCM2595 0.02 1357141 1357141 S 300028 Rhodococcus triatomae 0.01 1329764 1329764 S 38310 Rhodococcus coprophilus 0.01 849243 849243 S 262776 Rhodococcus imtechensis 0.01 778083 593074 S 103816 Rhodococcus pyridinivorans 0.00 185009 185009 S1 1435356 Rhodococcus pyridinivorans SB3094 0.00 367430 364473 S 191292 Rhodococcus aetherivorans 0.00 2957 2957 S1 1036179 Rhodococcus aetherivorans I24 0.00 291337 291337 S 334542 Rhodococcus qingshengii 0.00 114347 114347 S 1500843 Rhodococcus biphenylivorans 0.45 40720078 896452 G 1817 Nocardia 0.07 6314638 4497577 S 37326 Nocardia brasiliensis 0.02 1817061 1817061 S1 1133849 Nocardia brasiliensis ATCC 700358 0.05 4869807 2481 G1 2637762 unclassified Nocardia 0.03 2487919 2487919 S 1047172 Nocardia sp. CS682 0.03 2376123 2376123 S 2755382 Nocardia sp. WCH-YHL-001 0.00 1883 1883 S 312532 Nocardia sp. C-14-1 0.00 1401 1401 S 373212 Nocardia sp. 107 0.05 4280203 2867859 S 135487 Nocardia cyriacigeorgica 0.02 1412344 1412344 S1 1127134 Nocardia cyriacigeorgica GUH-2 0.05 4271056 4271056 S 455432 Nocardia terpenica 0.03 2908649 2908649 S 228602 Nocardia arthritidis 0.03 2435050 0 S 37330 Nocardia nova 0.03 2435050 2435050 S1 1415166 Nocardia nova SH22a 0.02 2199403 2199403 S 37332 Nocardia seriolae 0.02 2193642 2193642 S 480035 Nocardia wallacei 0.02 2185874 1696036 S 37329 Nocardia farcinica 0.01 489838 489838 S1 247156 Nocardia farcinica IFM 10152 0.02 2155241 2155241 S 1823 Nocardia otitidiscaviarum 0.02 2132794 2132794 S 2382165 Nocardia yunnanensis 0.02 2026301 2026301 S 2213200 Nocardia mangyaensis 0.02 1849582 1849582 S 1824 Nocardia asteroides 0.00 1386 1386 S 257277 Nocardia aobensis 0.80 72424813 615890 F 1653 Corynebacteriaceae 0.79 71653633 3256769 G 1716 Corynebacterium 0.12 10878838 19568 G1 2624378 unclassified Corynebacterium 0.01 979910 979910 S 2675219 Corynebacterium sp. 2039 0.01 841975 841975 S 2684405 Corynebacterium sp. 4H37-19 0.01 820483 820483 S 699041 Corynebacterium sp. NML93-0612 0.01 787025 787025 S 2675218 Corynebacterium sp. 2019 0.01 763929 763929 S 2675216 Corynebacterium sp. 1959 0.01 719717 719717 S 2487892 Corynebacterium sp. LMM-1652 0.01 714637 714637 S 2080740 Corynebacterium sp. 2183 0.01 703541 703541 S 702967 Corynebacterium sp. NML98-0116 0.01 701796 701796 S 2599641 Corynebacterium sp. sy039 0.01 699626 699626 S 2684406 Corynebacterium sp. 23H37-10 0.01 697928 697928 S 2754725 Corynebacterium sp. Marseille-Q3630 0.01 678214 678214 S 2768834 Corynebacterium sp. zg-320 0.01 678165 678165 S 2079535 Corynebacterium sp. 2184 0.01 662698 662698 S 2763010 Corynebacterium sp. zg-917 0.00 401238 401238 S 1487956 Corynebacterium sp. ATCC 6931 0.00 8388 8388 S 373068 Corynebacterium sp. L2-79-05 0.03 2459043 2193643 S 65058 Corynebacterium ulcerans 0.00 125664 125664 S1 1006579 Corynebacterium ulcerans FRC11 0.00 57128 57128 S1 945711 Corynebacterium ulcerans 809 0.00 55543 55543 S1 945712 Corynebacterium ulcerans BR-AD22 0.00 26976 26976 S1 1408268 Corynebacterium ulcerans FRC58 0.00 89 89 S1 996634 Corynebacterium ulcerans 0102 0.02 1691704 1486805 S 1717 Corynebacterium diphtheriae 0.00 36945 36945 S1 698973 Corynebacterium diphtheriae BH8 0.00 34922 34922 S1 698968 Corynebacterium diphtheriae HC02 0.00 31600 31600 S1 698962 Corynebacterium diphtheriae 31A 0.00 25613 25613 S1 698965 Corynebacterium diphtheriae CDCE 8392 0.00 24432 24432 S1 698972 Corynebacterium diphtheriae INCA 402 0.00 18140 18140 S1 698969 Corynebacterium diphtheriae HC03 0.00 16186 16186 S1 698971 Corynebacterium diphtheriae VA01 0.00 10556 10556 S1 698970 Corynebacterium diphtheriae HC04 0.00 5408 0 S1 1806053 Corynebacterium diphtheriae bv. mitis 0.00 5408 5408 S2 1450520 Corynebacterium diphtheriae bv. mitis str. ISS 3319 0.00 487 487 S1 698963 Corynebacterium diphtheriae C7 (beta) 0.00 262 262 S1 698966 Corynebacterium diphtheriae 241 0.00 210 210 S1 698964 Corynebacterium diphtheriae PW8 0.00 77 77 S1 698967 Corynebacterium diphtheriae HC01 0.00 61 61 S1 257309 Corynebacterium diphtheriae NCTC 13129 0.01 1342384 1043445 S 38289 Corynebacterium jeikeium 0.00 298939 298939 S1 306537 Corynebacterium jeikeium K411 0.01 1339824 1218199 S 1718 Corynebacterium glutamicum 0.00 116688 116688 S1 340322 Corynebacterium glutamicum R 0.00 2156 2156 S1 1204414 Corynebacterium glutamicum K051 0.00 1073 1073 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.00 1066 1066 S1 196627 Corynebacterium glutamicum ATCC 13032 0.00 326 326 S1 1232384 Corynebacterium glutamicum ZL-6 0.00 249 249 S1 1232383 Corynebacterium glutamicum SCgG2 0.00 38 38 S1 1232381 Corynebacterium glutamicum SCgG1 0.00 29 29 S1 1310161 Corynebacterium glutamicum MB001 0.01 1306124 1306124 S 43770 Corynebacterium striatum 0.01 1247603 1247603 S 43768 Corynebacterium matruchotii 0.01 1209123 1209123 S 1725 Corynebacterium xerosis 0.01 1170040 1156709 S 1719 Corynebacterium pseudotuberculosis 0.00 5293 5293 S1 1089446 Corynebacterium pseudotuberculosis 267 0.00 2413 2413 S1 1161911 Corynebacterium pseudotuberculosis Cp162 0.00 1987 1987 S1 1087452 Corynebacterium pseudotuberculosis 3/99-5 0.00 1719 1719 S1 1117942 Corynebacterium pseudotuberculosis P54B96 0.00 1104 1104 S1 935298 Corynebacterium pseudotuberculosis PAT10 0.00 356 356 S1 765874 Corynebacterium pseudotuberculosis FRC41 0.00 179 179 S1 681645 Corynebacterium pseudotuberculosis C231 0.00 140 140 S1 1087453 Corynebacterium pseudotuberculosis 42/02-A 0.00 36 36 S1 935697 Corynebacterium pseudotuberculosis CIP 52.97 0.00 29 29 S1 889513 Corynebacterium pseudotuberculosis I19 0.00 25 25 S1 1087451 Corynebacterium pseudotuberculosis 31 0.00 22 22 S1 1074485 Corynebacterium pseudotuberculosis 316 0.00 19 19 S1 1168865 Corynebacterium pseudotuberculosis 258 0.00 9 9 S1 679896 Corynebacterium pseudotuberculosis 1002 0.01 1097575 0 S 1404244 Corynebacterium glyciniphilum 0.01 1097575 1097575 S1 1404245 Corynebacterium glyciniphilum AJ 3170 0.01 1093544 1093544 S 571915 Corynebacterium mustelae 0.01 1090351 1090351 S 1705 Corynebacterium stationis 0.01 990797 990797 S 2506452 Corynebacterium suranareeae 0.01 970747 970747 S 1724 Corynebacterium renale 0.01 948729 948729 S 1862358 Corynebacterium choanis 0.01 946614 0 S 1727 Corynebacterium variabile 0.01 946614 946614 S1 858619 Corynebacterium variabile DSM 44702 0.01 944702 944702 S 146827 Corynebacterium simulans 0.01 942473 0 S 152794 Corynebacterium efficiens 0.01 942473 942473 S1 196164 Corynebacterium efficiens YS-314 0.01 937424 937424 S 35757 Corynebacterium cystitidis 0.01 933942 933942 S 1737425 Corynebacterium provencense 0.01 916647 916647 S 1652495 Corynebacterium crudilactis 0.01 910399 0 S 225326 Corynebacterium halotolerans 0.01 910399 910399 S1 1121362 Corynebacterium halotolerans YIM 70093 = DSM 44683 0.01 896739 0 S 1032851 Corynebacterium nuruki 0.01 896739 896739 S1 863239 Corynebacterium nuruki S6-4 0.01 883101 0 S 203263 Corynebacterium aquilae 0.01 883101 883101 S1 1431546 Corynebacterium aquilae DSM 44791 0.01 873508 0 S 160386 Corynebacterium casei 0.01 873508 873508 S1 1285583 Corynebacterium casei LMG S-19264 0.01 873308 1333 S 1721 Corynebacterium callunae 0.01 871975 871975 S1 1121353 Corynebacterium callunae DSM 20147 0.01 862012 862012 S 161895 Corynebacterium phocae 0.01 857727 0 S 1408191 Corynebacterium deserti 0.01 857727 857727 S1 931089 Corynebacterium deserti GIMN1.010 0.01 843765 0 S 1231000 Corynebacterium lactis 0.01 843765 843765 S1 1408189 Corynebacterium lactis RW2-5 0.01 832882 0 S 575200 Corynebacterium maris 0.01 832882 832882 S1 1224163 Corynebacterium maris DSM 45190 0.01 832415 832415 S 1697 Corynebacterium ammoniagenes 0.01 831445 831445 S 35755 Corynebacterium kutscheri 0.01 824126 0 S 38305 Corynebacterium vitaeruminis 0.01 824126 824126 S1 1224164 Corynebacterium vitaeruminis DSM 20294 0.01 822758 822758 S 1050174 Corynebacterium epidermidicanis 0.01 820375 674774 S 43771 Corynebacterium urealyticum 0.00 145234 145234 S1 1267754 Corynebacterium urealyticum DSM 7111 0.00 367 367 S1 504474 Corynebacterium urealyticum DSM 7109 0.01 813724 813724 S 28028 Corynebacterium flavescens 0.01 808810 808810 S 136857 Corynebacterium testudinoris 0.01 788726 0 S 89154 Corynebacterium terpenotabidum 0.01 788726 788726 S1 1200352 Corynebacterium terpenotabidum Y-11 0.01 780210 0 S 169292 Corynebacterium aurimucosum 0.01 780210 780210 S1 548476 Corynebacterium aurimucosum ATCC 700975 0.01 779046 779046 S 161899 Corynebacterium singulare 0.01 776425 0 S 161879 Corynebacterium kroppenstedtii 0.01 776425 776425 S1 645127 Corynebacterium kroppenstedtii DSM 44385 0.01 772388 0 S 258224 Corynebacterium resistens 0.01 772388 772388 S1 662755 Corynebacterium resistens DSM 45100 0.01 771887 0 S 1121358 Corynebacterium doosanense 0.01 771887 771887 S1 558173 Corynebacterium doosanense CAU 212 = DSM 45436 0.01 755920 755920 S 156976 Corynebacterium riegelii 0.01 747830 747830 S 2488819 Corynebacterium endometrii 0.01 744925 744925 S 38301 Corynebacterium minutissimum 0.01 741935 741935 S 187491 Corynebacterium glaucum 0.01 737290 737290 S 156978 Corynebacterium imitans 0.01 731834 731834 S 441500 Corynebacterium timonense 0.01 729562 729562 S 161896 Corynebacterium camporealensis 0.01 722389 0 S 1223514 Corynebacterium humireducens 0.01 722389 722389 S1 1223515 Corynebacterium humireducens NBRC 106098 = DSM 45392 0.01 716787 716787 S 1072256 Corynebacterium uterequi 0.01 712689 712689 S 43990 Corynebacterium segmentosum 0.01 709536 0 S 349751 Corynebacterium marinum 0.01 709536 709536 S1 1224162 Corynebacterium marinum DSM 44953 0.01 695592 0 S 38288 Corynebacterium genitalium 0.01 695592 695592 S1 585529 Corynebacterium genitalium ATCC 33030 0.01 691488 0 S 1230998 Corynebacterium frankenforstense 0.01 691488 691488 S1 1437875 Corynebacterium frankenforstense DSM 45800 0.01 686463 686463 S 191610 Corynebacterium atypicum 0.01 673922 673922 S 2079234 Corynebacterium geronticis 0.01 637282 637282 S 2594913 Corynebacterium sanguinis 0.01 634003 634003 S 401472 Corynebacterium ureicelerivorans 0.01 631943 0 S 191493 Corynebacterium sphenisci 0.01 631943 631943 S1 1437874 Corynebacterium sphenisci DSM 44792 0.01 628179 0 S 42817 Corynebacterium argentoratense 0.01 628179 628179 S1 1348662 Corynebacterium argentoratense DSM 44202 0.01 621827 621827 S 1471400 Corynebacterium pelargi 0.01 610854 610854 S 2080757 Corynebacterium pseudopelargi 0.01 594673 594673 S 38302 Corynebacterium mycetoides 0.01 523891 523891 S 2719119 Corynebacterium rouxii 0.00 1355 1355 S 38304 Corynebacterium tuberculostearicum 0.00 691 184 S 92706 [Brevibacterium] flavum 0.00 507 507 S1 1232385 [Brevibacterium] flavum ZL-1 0.00 155290 0 F1 42818 unclassified Corynebacteriaceae 0.00 155290 155290 S 1164002 Corynebacteriaceae bacterium 'ARUP UnID 227' 0.22 19562868 0 F 85026 Gordoniaceae 0.22 19562868 2437378 G 2053 Gordonia 0.07 5887019 38183 G1 2657482 unclassified Gordonia 0.02 1489652 1489652 S 337191 Gordonia sp. KTR9 0.01 1279759 1279759 S 1737359 Gordonia sp. 1D 0.01 1149230 1149230 S 2059875 Gordonia sp. YC-JH1 0.01 952258 952258 S 2597659 Gordonia sp. HY186 0.01 541463 541463 S 2698900 Gordonia sp. JH63 0.00 436474 436474 S 2676309 Gordonia sp. 135 0.02 1949333 1949333 S 2055 Gordonia terrae 0.02 1715684 1715684 S 2420509 Gordonia insulae 0.02 1713879 0 S 84595 Gordonia polyisoprenivorans 0.02 1713879 1713879 S1 1112204 Gordonia polyisoprenivorans VH2 0.02 1578700 1578700 S 36822 Gordonia rubripertincta 0.02 1489654 1489603 S 2054 Gordonia bronchialis 0.00 51 51 S1 526226 Gordonia bronchialis DSM 43247 0.01 1251551 1251551 S 1136941 Gordonia phthalatica 0.01 1133491 1133491 S 1004901 Gordonia iterans 0.00 388591 388591 S 84096 Gordonia alkanivorans 0.00 17588 17588 S 158898 Gordonia westfalica 0.06 5148921 0 F 85029 Dietziaceae 0.06 5148921 305868 G 37914 Dietzia 0.02 1860954 1027761 G1 2617939 unclassified Dietzia 0.01 804093 804093 S 712270 Dietzia sp. oral taxon 368 0.00 28302 28302 S 912801 Dietzia sp. DQ12-45-1b 0.00 798 798 S 2052657 Dietzia sp. JS16-p6b 0.01 1075426 1075426 S 139021 Dietzia psychralcaliphila 0.01 1058571 1058571 S 499555 Dietzia timorensis 0.01 848102 848102 S 546160 Dietzia lutea 0.05 4251543 0 F 85028 Tsukamurellaceae 0.05 4251543 197399 G 2060 Tsukamurella 0.03 2421435 1148096 S 2061 Tsukamurella paurometabola 0.01 1273339 1273339 S1 521096 Tsukamurella paurometabola DSM 20162 0.02 1632709 1632709 S 57704 Tsukamurella tyrosinosolvens 0.03 2967029 19 O1 697024 Corynebacteriales incertae sedis 0.03 2284571 0 G 741759 Tomitella 0.03 2284571 81148 G1 2645312 unclassified Tomitella 0.01 1146633 1146633 S 2760083 Tomitella sp. HY172 0.01 1056790 1056790 S 2597660 Tomitella sp. HY188 0.01 682439 0 G 1847725 Lawsonella 0.01 682439 682439 S 1528099 Lawsonella clevelandensis 0.01 964061 0 F 316606 Segniliparaceae 0.01 964061 0 G 286801 Segniliparus 0.01 964061 0 S 286802 Segniliparus rotundus 0.01 964061 964061 S1 640132 Segniliparus rotundus DSM 44985 3.06 275803123 1692575 O 85006 Micrococcales 1.30 117426255 1774822 F 85023 Microbacteriaceae 0.45 40170535 2507970 G 33882 Microbacterium 0.20 17932347 959678 G1 2609290 unclassified Microbacterium 0.01 1248305 1248305 S 1714373 Microbacterium sp. No. 7 0.01 1097174 1097174 S 2567934 Microbacterium sp. 4R-513 0.01 1050101 1050101 S 2709304 Microbacterium sp. Se63.02b 0.01 994488 994488 S 2603598 Microbacterium sp. CBA3102 0.01 945032 945032 S 367477 Microbacterium sp. XT11 0.01 941850 941850 S 1906742 Microbacterium sp. BH-3-3-3 0.01 936222 936222 S 1938334 Microbacterium sp. TPU 3598 0.01 924620 924620 S 2268461 Microbacterium sp. ABRD_28 0.01 923334 923334 S 2048898 Microbacterium sp. Y-01 0.01 922364 922364 S 2614638 Microbacterium sp. ST-M6 0.01 912823 912823 S 2489212 Microbacterium sp. RG1 0.01 899446 899446 S 2614639 Microbacterium sp. L-031 0.01 853738 853738 S 2014534 Microbacterium sp. PM5 0.01 847845 847845 S 2483401 Microbacterium sp. 10M-3C3 0.01 782278 782278 S 912630 Microbacterium sp. LKL04 0.01 730657 730657 S 2606451 Microbacterium sp. 1S1 0.01 588371 588371 S 2766784 Microbacterium sp. Nx66 0.01 477177 477177 S 1795053 Microbacterium sp. PAMC 28756 0.00 284343 284343 S 1916917 Microbacterium sp. 1.5R 0.00 271665 271665 S 1696072 Microbacterium sp. CGR1 0.00 203294 203294 S 2070348 Microbacterium sp. SGAir0570 0.00 137542 137542 S 2103230 Microbacterium sp. str. 'China' 0.03 2729505 2729505 S 104336 Microbacterium foliorum 0.02 1993822 1993822 S 162426 Microbacterium hominis 0.02 1877751 1877751 S 82380 Microbacterium oxydans 0.02 1718248 1718248 S 273677 Microbacterium oleivorans 0.01 1093266 0 S 2033 Microbacterium testaceum 0.01 1093266 1093266 S1 979556 Microbacterium testaceum StLB037 0.01 1087479 1087479 S 2509458 Microbacterium protaetiae 0.01 1035383 1035383 S 370764 Microbacterium pygmaeum 0.01 958474 958474 S 1072463 Microbacterium lemovicicum 0.01 952209 952209 S 2541726 Microbacterium wangchenii 0.01 934829 934829 S 57043 Microbacterium esteraromaticum 0.01 904572 904572 S 1526412 Microbacterium endophyticum 0.01 876824 876824 S 36805 Microbacterium aurum 0.01 847437 847437 S 84292 Microbacterium chocolatum 0.01 820885 820885 S 743009 Microbacterium oryzae 0.01 783001 783001 S 936337 Microbacterium amylolyticum 0.01 749614 749614 S 904291 Microbacterium sediminis 0.00 185734 185734 S 300019 Microbacterium paludicola 0.00 181185 181185 S 199592 Microbacterium paraoxydans 0.11 10112713 820710 G 33886 Rathayibacter 0.05 4314481 687389 G1 2609250 unclassified Rathayibacter 0.01 1021423 1021423 S 2609252 Rathayibacter sp. VKM Ac-2759 0.01 934653 934653 S 2609253 Rathayibacter sp. VKM Ac-2760 0.01 684581 684581 S 2609257 Rathayibacter sp. VKM Ac-2804 0.01 504767 504767 S 2609255 Rathayibacter sp. VKM Ac-2801 0.00 246406 246406 S 2609258 Rathayibacter sp. VKM Ac-2805 0.00 235262 235262 S 2609254 Rathayibacter sp. VKM Ac-2762 0.01 1110382 745337 S 110937 Rathayibacter festucae 0.00 365045 365045 S1 1328866 Rathayibacter festucae DSM 15932 0.01 941966 941966 S 59737 Rathayibacter iranicus 0.01 803121 803121 S 1671680 Rathayibacter tanaceti 0.01 719626 719626 S 33888 Rathayibacter tritici 0.01 717045 717045 S 145458 Rathayibacter toxicus 0.01 685382 685382 S 33887 Rathayibacter rathayi 0.08 7172004 71371 G 33877 Agromyces 0.04 3915173 36280 G1 2639701 unclassified Agromyces 0.01 1105475 1105475 S 2498704 Agromyces sp. LHK192 0.01 1017042 1017042 S 2592652 Agromyces sp. KACC 19306 0.01 946115 946115 S 2585717 Agromyces sp. HY052 0.01 810261 810261 S 2080742 Agromyces sp. MF30-A 0.01 1195934 1195934 S 453304 Agromyces aureus 0.01 997185 997185 S 2509455 Agromyces protaetiae 0.01 992341 992341 S 589382 Agromyces flavus 0.08 6897301 258277 G 2034 Curtobacterium 0.04 3903793 627439 G1 257496 unclassified Curtobacterium 0.01 903453 903453 S 1905847 Curtobacterium sp. BH-2-1-1 0.01 787859 787859 S 2070337 Curtobacterium sp. SGAir0471 0.01 771871 771871 S 1561023 Curtobacterium sp. MR_MD2014 0.00 439905 439905 S 2495430 Curtobacterium sp. Csp2 0.00 373266 373266 S 2588937 Curtobacterium sp. csp3 0.02 1595499 0 S 2035 Curtobacterium flaccumfaciens 0.02 1595499 1595499 S1 138532 Curtobacterium flaccumfaciens pv. flaccumfaciens 0.01 1139732 1139732 S 69373 Curtobacterium pusillum 0.08 6867418 105123 G 110932 Leifsonia 0.04 3252640 1153702 G1 2663824 unclassified Leifsonia 0.01 1137835 1137835 S 2724914 Leifsonia sp. PS1209 0.01 960798 960798 S 1798223 Leifsonia sp. 21MFCrub1.1 0.00 69 69 S 1798221 Leifsonia sp. 466MF 0.00 64 64 S 1798216 Leifsonia sp. 98AMF 0.00 55 55 S 1798222 Leifsonia sp. 157MF 0.00 45 45 S 1798220 Leifsonia sp. 467MF 0.00 37 37 S 1798219 Leifsonia sp. 509MF 0.00 35 35 S 1798217 Leifsonia sp. 197AMF 0.03 2261253 1074101 S 1575 Leifsonia xyli 0.01 596009 0 S1 59736 Leifsonia xyli subsp. xyli 0.01 596009 596009 S2 281090 Leifsonia xyli subsp. xyli str. CTCB07 0.01 591143 0 S1 31966 Leifsonia xyli subsp. cynodontis 0.01 591143 591143 S2 1389489 Leifsonia xyli subsp. cynodontis DSM 46306 0.01 1248402 1248402 S 150026 Leifsonia shinshuensis 0.06 5612087 20600 G 55968 Leucobacter 0.04 3872204 42363 G1 2621730 unclassified Leucobacter 0.01 1104710 1104710 S 2714935 Leucobacter sp. HDW9C 0.01 975200 975200 S 2714933 Leucobacter sp. HDW9A 0.01 887950 887950 S 2714934 Leucobacter sp. HDW9B 0.01 861981 861981 S 1935379 Leucobacter sp. DSM 101948 0.01 970694 970694 S 1784719 Leucobacter triazinivorans 0.01 748589 748589 S 683042 Leucobacter denitrificans 0.04 3779008 0 G 1573 Clavibacter 0.04 3779008 645800 S 28447 Clavibacter michiganensis 0.01 853004 786257 S1 33013 Clavibacter michiganensis subsp. michiganensis 0.00 66747 66747 S2 443906 Clavibacter michiganensis subsp. michiganensis NCPPB 382 0.01 763772 763772 S1 1874630 Clavibacter michiganensis subsp. capsici 0.01 594839 594839 S1 31964 Clavibacter michiganensis subsp. sepedonicus 0.01 495692 495692 S1 33014 Clavibacter michiganensis subsp. insidiosus 0.00 425901 425135 S1 31963 Clavibacter michiganensis subsp. nebraskensis 0.00 766 766 S2 1097677 Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 0.04 3340023 315850 G 69578 Cryobacterium 0.01 1083201 0 G1 2649013 unclassified Cryobacterium 0.01 1083201 1083201 S 1978566 Cryobacterium sp. LW097 0.01 980550 980550 S 2220095 Cryobacterium soli 0.01 960422 960422 S 670052 Cryobacterium arcticum 0.03 2642382 539470 G 190323 Plantibacter 0.02 1413842 211997 G1 2624265 unclassified Plantibacter 0.01 620714 620714 S 2583822 Plantibacter sp. M259 0.01 581131 581131 S 2480625 Plantibacter sp. PA-3-X8 0.01 689070 689070 S 150123 Plantibacter flavus 0.03 2634309 0 G 235888 Salinibacterium 0.03 2634309 5563 G1 2632331 unclassified Salinibacterium 0.01 938259 938259 S 2508880 Salinibacterium sp. UTAS2018 0.01 860189 860189 S 2079791 Salinibacterium sp. CGMCC 1.16371 0.01 830298 830298 S 2603292 Salinibacterium sp. dk2585 0.03 2578921 0 F1 1655488 Luna cluster 0.03 2578921 969 F2 1655489 Luna-1 subcluster 0.02 1603699 5888 G 529883 Rhodoluna 0.01 686455 686455 S 232537 Rhodoluna limnophila 0.01 456050 456050 S 529884 Rhodoluna lacicola 0.01 455306 455306 S 535712 Candidatus Rhodoluna planktonica 0.01 974253 0 G 529881 Candidatus Aquiluna 0.01 974253 652 G1 2617988 unclassified Candidatus Aquiluna 0.01 535963 535963 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red 0.00 437638 437638 S 2499157 Candidatus Aquiluna sp. 15G-AUS-rot 0.03 2394102 67233 G 46352 Agrococcus 0.01 853724 853724 S 399736 Agrococcus jejuensis 0.01 764201 0 G1 2615065 unclassified Agrococcus 0.01 764201 764201 S 2070347 Agrococcus sp. SGAir0287 0.01 708944 708944 S 684552 Agrococcus carbonis 0.03 2362516 0 G 447237 Frondihabitans 0.03 2362516 7533 G1 2626248 unclassified Frondihabitans 0.02 1388699 1388699 S 1795630 Frondihabitans sp. PAMC 28766 0.01 966284 966284 S 1446794 Frondihabitans sp. 762G35 0.02 2038129 0 G 518733 Microterricola 0.02 2038129 2038129 S 412690 Microterricola viridarii 0.02 2024158 0 G 76634 Mycetocola 0.02 2024158 325 G1 2685235 unclassified Mycetocola 0.01 1058471 1058471 S 2116510 Mycetocola sp. JXN-3 0.01 965362 965362 S 2079792 Mycetocola sp. 449 0.02 1707708 0 G 427753 Humibacter 0.02 1707708 65 G1 2635918 unclassified Humibacter 0.01 1230058 1230058 S 2599293 Humibacter sp. WJ7-1 0.01 477585 477585 S 2282656 Humibacter sp. BT305 0.02 1600054 16887 G 2680004 Protaetiibacter 0.01 812078 812078 S 2419774 Protaetiibacter intestinalis 0.01 771089 0 G1 2680006 unclassified Protaetiibacter 0.01 771089 771089 S 2759943 Protaetiibacter sp. SSC-01 0.02 1502493 80446 G 1705353 Aurantimicrobium 0.01 981205 3509 G1 2623385 unclassified Aurantimicrobium 0.01 539171 539171 S 1987356 Aurantimicrobium sp. MWH-Mo1 0.00 438525 438525 S 2079575 Aurantimicrobium sp. MWH-Uga1 0.00 440842 440842 S 708131 Aurantimicrobium minutum 0.01 1277429 0 G 881616 Herbiconiux 0.01 1277429 0 G1 2618217 unclassified Herbiconiux 0.01 1277429 1277429 S 2735133 Herbiconiux sp. SALV-R1 0.01 1061098 0 G 1195526 Gryllotalpicola 0.01 1061098 1061098 S 2419771 Gryllotalpicola protaetiae 0.01 1040930 0 G 1649454 Glaciihabitans 0.01 1040930 0 G1 2645362 unclassified Glaciihabitans 0.01 1040930 1040930 S 2596912 Glaciihabitans sp. INWT7 0.01 969861 0 G 1230698 Marisediminicola 0.01 969861 969861 S 674079 Marisediminicola antarctica 0.01 948985 0 G 1433997 Diaminobutyricimonas 0.01 948985 0 G1 2643261 unclassified Diaminobutyricimonas 0.01 948985 948985 S 2683590 Diaminobutyricimonas sp. LJ205 0.01 895082 0 G 96492 Frigoribacterium 0.01 895082 0 G1 2627005 unclassified Frigoribacterium 0.01 895082 895082 S 2596916 Frigoribacterium sp. NBH87 0.01 764811 0 G 337004 Microcella 0.01 764811 764811 S 279828 Microcella alkaliphila 0.01 717727 0 G 1331730 Chryseoglobus 0.01 717727 0 G1 2642974 unclassified Chryseoglobus 0.01 717727 717727 S 2750620 Chryseoglobus sp. CTD02-10-2 0.01 683984 0 G 1434018 Lysinimonas 0.01 683984 0 G1 2621488 unclassified Lysinimonas 0.01 683984 683984 S 2592654 Lysinimonas sp. KACC 19322 0.01 658602 0 F1 90316 unclassified Microbacteriaceae 0.01 658602 658602 S 1804990 Microbacteriaceae bacterium WY83 0.01 628723 0 G 1759331 Cnuibacter 0.01 628723 628723 S 1619308 Cnuibacter physcomitrellae 0.01 568340 0 G 1434032 Pontimonas 0.01 568340 568340 S 1159327 Pontimonas salivibrio 0.78 70814447 2750966 F 1268 Micrococcaceae 0.30 27307045 1179504 G 1663 Arthrobacter 0.20 17936901 346732 G1 235627 unclassified Arthrobacter 0.02 1529426 1529426 S 2575374 Arthrobacter sp. 24S4-2 0.02 1471126 1471126 S 2020486 Arthrobacter sp. YN 0.02 1444626 1444626 S 1704044 Arthrobacter sp. ERGS1:01 0.02 1426158 1426158 S 1357915 Arthrobacter sp. QXT-31 0.02 1372583 1372583 S 1494608 Arthrobacter sp. PAMC 25486 0.02 1367373 1367373 S 290399 Arthrobacter sp. FB24 0.01 1287357 1287357 S 1849032 Arthrobacter sp. U41 0.01 1195420 1195420 S 2079227 Arthrobacter sp. PGP41 0.01 1156426 1156426 S 1652545 Arthrobacter sp. YC-RL1 0.01 1141658 1141658 S 2565366 Arthrobacter sp. PAMC25564 0.01 1067608 1067608 S 904039 Arthrobacter sp. NEB 688 0.01 893987 893987 S 2578107 Arthrobacter sp. KBS0702 0.01 834508 834508 S 2600159 Arthrobacter sp. UKPF54-2 0.01 537801 537801 S 1806905 Arthrobacter sp. ZXY-2 0.00 421066 421066 S 1118963 Arthrobacter sp. Rue61a 0.00 165405 165405 S 1667 Arthrobacter sp. 0.00 139931 139931 S 2184581 Arthrobacter sp. AQ5-05 0.00 33298 33298 S 311808 Arthrobacter sp. 68b 0.00 28353 28353 S 415095 Arthrobacter sp. AK-1 0.00 20300 20300 S 347209 Arthrobacter sp. J3.40 0.00 15457 15457 S 447032 Arthrobacter sp. Chr15 0.00 15118 15118 S 347213 Arthrobacter sp. J3.49 0.00 12624 12624 S 347208 Arthrobacter sp. J3.37 0.00 11994 11994 S 347202 Arthrobacter sp. 31.31 0.00 566 566 S 347215 Arthrobacter sp. J3.53 0.03 2823761 2823761 S 656366 Arthrobacter alpinus 0.02 1603973 1603973 S 1670 Arthrobacter citreus 0.02 1495639 1495639 S 37928 Arthrobacter crystallopoietes 0.01 1298621 1298621 S 2211210 Arthrobacter dokdonellae 0.01 962773 962773 S 37921 Arthrobacter agilis 0.00 4242 4242 S 122866 Arthrobacter keyseri 0.00 1631 1631 S 71253 Arthrobacter rhombi 0.11 10076863 752465 G 1742993 Pseudarthrobacter 0.05 4850796 984092 G1 2647000 unclassified Pseudarthrobacter 0.01 1169183 1169183 S 2697569 Pseudarthrobacter sp. YJ56 0.01 922080 922080 S 2596911 Pseudarthrobacter sp. NBSH8 0.01 900746 900746 S 2590775 Pseudarthrobacter sp. NIBRBAC000502772 0.00 440762 440762 S 2590785 Pseudarthrobacter sp. NIBRBAC000502770 0.00 433933 433933 S 2590774 Pseudarthrobacter sp. NIBRBAC000502771 0.01 1231096 0 S 85085 Pseudarthrobacter chlorophenolicus 0.01 1231096 1231096 S1 452863 Pseudarthrobacter chlorophenolicus A6 0.01 1216207 0 S 361575 Pseudarthrobacter phenanthrenivorans 0.01 1216207 1216207 S1 930171 Pseudarthrobacter phenanthrenivorans Sphe3 0.01 1055741 1055741 S 728066 Pseudarthrobacter equi 0.01 970558 970558 S 121292 Pseudarthrobacter sulfonivorans 0.10 8737528 1342945 G 57493 Kocuria 0.03 2278060 18542 G1 2649579 unclassified Kocuria 0.01 925773 925773 S 2711328 Kocuria sp. TGY1127_2 0.01 885195 885195 S 2711329 Kocuria sp. TGY1120_3 0.00 290737 290737 S 2719588 Kocuria sp. KD4 0.00 157813 157813 S 1702043 Kocuria sp. BT304 0.01 1273640 1273640 S 1275 Kocuria rosea 0.01 1016038 1016038 S 388357 Kocuria turfanensis 0.01 873382 873382 S 446860 Kocuria flava 0.01 820852 820852 S 71999 Kocuria palustris 0.01 701404 701404 S 1272 Kocuria varians 0.00 286250 286250 S 1049583 Kocuria indica 0.00 144957 144725 S 72000 Kocuria rhizophila 0.00 232 232 S1 378753 Kocuria rhizophila DC2201 0.07 6053640 856770 G 1742989 Glutamicibacter 0.02 1459569 1459569 S 1933880 Glutamicibacter halophytocola 0.01 1068304 0 S 256701 Glutamicibacter arilaitensis 0.01 1068304 1068304 S1 861360 Glutamicibacter arilaitensis Re117 0.01 987575 987575 S 1775880 Glutamicibacter mishrai 0.01 974344 974344 S 162496 Glutamicibacter creatinolyticus 0.00 369089 369089 S 37929 Glutamicibacter nicotianae 0.00 337989 0 G1 2627139 unclassified Glutamicibacter 0.00 337989 337989 S 1155384 Glutamicibacter sp. ZJUTW 0.05 4828602 118330 G 32207 Rothia 0.02 1501446 1213716 S 43675 Rothia mucilaginosa 0.00 287730 287730 S1 680646 Rothia mucilaginosa DY-18 0.01 1340762 1034412 S 2047 Rothia dentocariosa 0.00 306350 306350 S1 762948 Rothia dentocariosa ATCC 17931 0.01 1092757 1092757 S 172042 Rothia aeria 0.01 775307 775307 S 85336 Rothia nasimurium 0.03 2656397 615513 G 1269 Micrococcus 0.02 1893050 1892334 S 1270 Micrococcus luteus 0.00 716 716 S1 465515 Micrococcus luteus NCTC 2665 0.00 147834 16135 G1 2620948 unclassified Micrococcus 0.00 69752 69752 S 1179670 Micrococcus sp. KBS0714 0.00 25964 25964 S 404582 Micrococcus sp. V7 0.00 11382 11382 S 404583 Micrococcus sp. A1 0.00 10856 10856 S 161213 Micrococcus sp. 28 0.00 6898 6898 S 376418 Micrococcus sp. A7 0.00 6847 6847 S 936902 Micrococcus sp. MG-2010-D12 0.01 1281126 0 G 596707 Sinomonas 0.01 1281126 1281126 S 37927 Sinomonas atrocyanea 0.01 1128881 0 G 2078575 Psychromicrobium 0.01 1128881 1128881 S 1618207 Psychromicrobium lacuslunae 0.01 972358 0 G 1645 Renibacterium 0.01 972358 972033 S 1646 Renibacterium salmoninarum 0.00 325 325 S1 288705 Renibacterium salmoninarum ATCC 33209 0.01 956078 0 G 169133 Citricoccus 0.01 956078 955509 G1 2632435 unclassified Citricoccus 0.00 286 286 S 2567883 Citricoccus sp. SGAir0453 0.00 283 283 S 2567881 Citricoccus sp. SGAir0253 0.01 909798 1359 G 1742992 Paenarthrobacter 0.00 442820 442820 S 37931 Paenarthrobacter ureafaciens 0.00 434889 0 S 43663 Paenarthrobacter aurescens 0.00 434889 434889 S1 290340 Paenarthrobacter aurescens TC1 0.00 30730 30730 S 29320 Paenarthrobacter nicotinovorans 0.01 832964 0 G 57494 Nesterenkonia 0.01 832964 0 G1 2629769 unclassified Nesterenkonia 0.01 832964 832964 S 2600320 Nesterenkonia sp. NBAIMH1 0.01 831789 0 G 1868332 Neomicrococcus 0.01 831789 831789 S 556325 Neomicrococcus aestuarii 0.01 824744 0 G 1160973 Auritidibacter 0.01 824744 0 G1 2634694 unclassified Auritidibacter 0.01 824744 824744 S 2170745 Auritidibacter sp. NML130574 0.01 665668 0 G 370735 Zhihengliuella 0.01 665668 0 G1 2626589 unclassified Zhihengliuella 0.01 665668 665668 S 2058657 Zhihengliuella sp. ISTPL4 0.21 19134831 196157 F 85021 Intrasporangiaceae 0.05 4684811 195053 G 265976 Serinicoccus 0.01 955522 0 G1 2643101 unclassified Serinicoccus 0.01 955522 955522 S 2593973 Serinicoccus sp. W204 0.01 925601 925601 S 1078471 Serinicoccus profundi 0.01 906828 906828 S 767452 Serinicoccus chungangensis 0.01 876448 876448 S 1758689 Serinicoccus hydrothermalis 0.01 825359 0 S 247333 Serinicoccus marinus 0.01 825359 825359 S1 1123251 Serinicoccus marinus DSM 15273 0.05 4467441 16256 G 125287 Ornithinimicrobium 0.04 3435824 8256 G1 2615080 unclassified Ornithinimicrobium 0.01 1221354 1221354 S 2594265 Ornithinimicrobium sp. H23M54 0.01 1114041 1114041 S 2508882 Ornithinimicrobium sp. HY006 0.01 1092173 1092173 S 2283195 Ornithinimicrobium sp. AMA3305 0.01 1015361 1015361 S 1288636 Ornithinimicrobium flavum 0.04 3334937 543169 G 53457 Janibacter 0.01 981560 981560 S 53458 Janibacter limosus 0.01 962834 962834 S 262209 Janibacter melonis 0.00 427886 427886 S 857417 Janibacter indicus 0.00 419488 0 G1 2649294 unclassified Janibacter 0.00 419488 419488 S 2761047 Janibacter sp. YB324 0.03 3086920 12575 G 367298 Phycicoccus 0.01 1116052 1116052 S 443156 Phycicoccus dokdonensis 0.01 1080811 0 G1 2637926 unclassified Phycicoccus 0.01 1080811 1080811 S 2714941 Phycicoccus sp. HDW14 0.01 877482 877482 S 1690220 Phycicoccus endophyticus 0.02 1378365 0 G 53357 Intrasporangium 0.02 1378365 1159357 S 53358 Intrasporangium calvum 0.00 219008 219008 S1 710696 Intrasporangium calvum DSM 43043 0.01 1002977 0 G 99479 Tetrasphaera 0.01 1002977 0 G1 2643346 unclassified Tetrasphaera 0.01 1002977 1002977 S 1813880 Tetrasphaera sp. HKS02 0.01 983223 0 G 267408 Arsenicicoccus 0.01 983223 0 G1 2663846 unclassified Arsenicicoccus 0.01 983223 983223 S 1658671 Arsenicicoccus sp. oral taxon 190 0.16 14065507 0 F 85019 Brevibacteriaceae 0.16 14065507 1262115 G 1696 Brevibacterium 0.06 5270832 87435 G1 2614124 unclassified Brevibacterium 0.01 1150888 1150888 S 2697563 Brevibacterium sp. WO024 0.01 947303 947303 S 2697565 Brevibacterium sp. o2 0.01 911139 911139 S 2575923 Brevibacterium sp. CS2 0.01 735647 735647 S 2762330 Brevibacterium sp. PAMC23299 0.01 728082 728082 S 2725563 Brevibacterium sp. 'Marine' 0.01 684954 684954 S 1496080 Brevibacterium sp. YB235 0.00 25384 25384 S 1406197 Brevibacterium sp. Ap13 0.03 2259176 2259176 S 273384 Brevibacterium aurantiacum 0.03 2256036 2256036 S 1703 Brevibacterium linens 0.01 1220473 1220473 S 629680 Brevibacterium sandarakinum 0.01 924841 924841 S 199591 Brevibacterium luteolum 0.01 872034 872034 S 1136497 Brevibacterium siliguriense 0.15 13358428 26139 F 85016 Cellulomonadaceae 0.10 9291956 172736 G 1707 Cellulomonas 0.06 5134932 24982 G1 2620175 unclassified Cellulomonas 0.01 1118481 1118481 S 2704467 Cellulomonas sp. H30R-01 0.01 1111675 1111675 S 2591145 Cellulomonas sp. Y8 0.01 979172 979172 S 2654191 Cellulomonas sp. JZ18 0.01 966822 966822 S 2729175 Cellulomonas sp. 40-2 0.01 933800 933800 S 2003551 Cellulomonas sp. PSBB021 0.01 1072565 0 S 1711 Cellulomonas flavigena 0.01 1072565 1072565 S1 446466 Cellulomonas flavigena DSM 20109 0.01 1050654 1032000 S 1708 Cellulomonas fimi 0.00 18654 18654 S1 590998 Cellulomonas fimi ATCC 484 0.01 950356 950356 S 2566013 Cellulomonas shaoxiangyii 0.01 910713 0 S 11 Cellulomonas gilvus 0.01 910713 910713 S1 593907 Cellulomonas gilvus ATCC 13127 0.01 1216654 0 G 162491 Oerskovia 0.01 1216654 0 G1 2619021 unclassified Oerskovia 0.01 1216654 1216654 S 1179673 Oerskovia sp. KBS0722 0.01 1037580 0 G 1926259 Pseudactinotalea 0.01 1037580 0 G1 2649176 unclassified Pseudactinotalea 0.01 1037580 1037580 S 2654547 Pseudactinotalea sp. HY158 0.01 935416 0 G 458839 Actinotalea 0.01 935416 0 G1 2638618 unclassified Actinotalea 0.01 935416 935416 S 2758442 Actinotalea sp. JY-7876 0.01 850683 0 G 665568 Paraoerskovia 0.01 850683 850683 S 545619 Paraoerskovia marina 0.11 10232214 3890 F 85020 Dermabacteraceae 0.08 7275665 310646 G 43668 Brachybacterium 0.02 2177267 4049 G1 2623841 unclassified Brachybacterium 0.01 1245021 1245021 S 1903186 Brachybacterium sp. P6-10-X1 0.01 928197 928197 S 2571029 Brachybacterium sp. SGAir0954 0.01 1058122 1058122 S 1331682 Brachybacterium ginsengisoli 0.01 956504 956504 S 556288 Brachybacterium saurashtrense 0.01 946058 946058 S 2017484 Brachybacterium vulturis 0.01 932488 0 S 43669 Brachybacterium faecium 0.01 932488 932488 S1 446465 Brachybacterium faecium DSM 4810 0.01 894580 894580 S 2017485 Brachybacterium avium 0.02 2009060 125511 G 36739 Dermabacter 0.01 946374 946374 S 1667168 Dermabacter jinjuensis 0.01 937175 937175 S 1630135 Dermabacter vaginalis 0.01 943599 0 G 472568 Devriesea 0.01 943599 943599 S 472569 Devriesea agamarum 0.10 8718515 85773 F 85017 Promicromonosporaceae 0.04 3744372 1019688 G 157920 Cellulosimicrobium 0.02 1524063 105778 G1 2624466 unclassified Cellulosimicrobium 0.01 1027464 1027464 S 2587808 Cellulosimicrobium sp. BI34T 0.00 198811 198811 S 2731680 Cellulosimicrobium sp. 72-3 0.00 192010 192010 S 1980001 Cellulosimicrobium sp. TH-20 0.01 1200621 1200621 S 1710 Cellulosimicrobium cellulans 0.02 2050742 7646 G 186188 Xylanimonas 0.01 1021925 1021925 S 2509459 Xylanimonas allomyrinae 0.01 1021171 0 S 186189 Xylanimonas cellulosilytica 0.01 1021171 1021171 S1 446471 Xylanimonas cellulosilytica DSM 15894 0.02 1862896 5520 G 254250 Isoptericola 0.01 1026873 0 S 372663 Isoptericola dokdonensis 0.01 1026873 1026873 S1 1300344 Isoptericola dokdonensis DS-3 0.01 830503 0 S 139208 Isoptericola variabilis 0.01 830503 830503 S1 743718 Isoptericola variabilis 225 0.01 974732 0 G 289244 Xylanimicrobium 0.01 974732 0 G1 2626399 unclassified Xylanimicrobium 0.01 974732 974732 S 2509457 Xylanimicrobium sp. FW10M-9 0.05 4194047 1757 F 145357 Dermacoccaceae 0.02 1776693 31848 G 57495 Dermacoccus 0.01 881489 0 G1 2643059 unclassified Dermacoccus 0.01 881489 881489 S 2762331 Dermacoccus sp. PAMC28757 0.01 863356 863356 S 1274 Dermacoccus nishinomiyaensis 0.02 1626783 0 G 745364 Luteipulveratus 0.02 1626783 1626783 S 571913 Luteipulveratus mongoliensis 0.01 788814 0 G 57499 Kytococcus 0.01 788814 0 S 1276 Kytococcus sedentarius 0.01 788814 788814 S1 478801 Kytococcus sedentarius DSM 20547 0.04 3222249 3134 F 1331736 Ruaniaceae 0.02 1673040 0 G 1331737 Haloactinobacterium 0.02 1673040 0 G1 2624404 unclassified Haloactinobacterium 0.02 1673040 1673040 S 2675754 Haloactinobacterium sp. HY164 0.02 1546075 0 G 626119 Ruania 0.02 1546075 0 G1 2648503 unclassified Ruania 0.02 1546075 1546075 S 2603206 Ruania sp. HY168 0.03 3087507 0 F 145358 Bogoriellaceae 0.03 3087507 7135 G 154116 Georgenia 0.02 2144592 1644 G1 2626815 unclassified Georgenia 0.01 1192110 1192110 S 2589797 Georgenia sp. Z443 0.01 950838 950838 S 2585135 Georgenia sp. Z294 0.01 935780 935780 S 2483799 Georgenia faecalis 0.03 3003956 852 F 85018 Dermatophilaceae 0.01 1129871 0 G 1184606 Austwickia 0.01 1129871 1129871 S 100225 Austwickia chelonae 0.01 1058864 0 G 984996 Mobilicoccus 0.01 1058864 0 G1 2649508 unclassified Mobilicoccus 0.01 1058864 1058864 S 2716227 Mobilicoccus sp. NJES-13 0.01 814369 0 G 1862 Dermatophilus 0.01 814369 814369 S 1863 Dermatophilus congolensis 0.03 2362482 1409 F 125316 Beutenbergiaceae 0.01 1339892 0 G 84756 Beutenbergia 0.01 1339892 0 S 84757 Beutenbergia cavernae 0.01 1339892 1339892 S1 471853 Beutenbergia cavernae DSM 12333 0.01 1021181 0 G 947525 Miniimonas 0.01 1021181 0 G1 2626367 unclassified Miniimonas 0.01 1021181 1021181 S 2171623 Miniimonas sp. S16 0.02 2138128 0 F 145360 Sanguibacteraceae 0.02 2138128 1070 G 60919 Sanguibacter 0.01 1213649 0 S 60920 Sanguibacter keddieii 0.01 1213649 1213649 S1 446469 Sanguibacter keddieii DSM 10542 0.01 923409 0 G1 2645534 unclassified Sanguibacter 0.01 923409 923409 S 2714931 Sanguibacter sp. HDW7 0.02 1481706 0 O1 577468 Micrococcales incertae sedis 0.01 1172187 0 G 754249 Luteimicrobium 0.01 1172187 1172187 S 1133546 Luteimicrobium xylanilyticum 0.00 309519 0 G 2038 Tropheryma 0.00 309519 261970 S 2039 Tropheryma whipplei 0.00 23951 23951 S1 218496 Tropheryma whipplei TW08/27 0.00 23598 23598 S1 203267 Tropheryma whipplei str. Twist 0.01 870276 0 F 85022 Jonesiaceae 0.01 870276 0 G 43673 Jonesia 0.01 870276 870259 S 43674 Jonesia denitrificans 0.00 17 17 S1 471856 Jonesia denitrificans DSM 20603 0.98 88714893 0 O 85010 Pseudonocardiales 0.98 88714893 554432 F 2070 Pseudonocardiaceae 0.29 26050822 2239470 G 1813 Amycolatopsis 0.11 10259902 20327 G1 2618356 unclassified Amycolatopsis 0.03 2741800 2741800 S 2742131 Amycolatopsis sp. Hca4 0.03 2646373 2646373 S 2653857 Amycolatopsis sp. YIM 10 0.03 2613623 2613623 S 1896961 Amycolatopsis sp. AA4 0.02 2237779 2237779 S 1911175 Amycolatopsis sp. BJA-103 0.03 2972945 2972945 S 129921 Amycolatopsis keratiniphila 0.03 2556778 2553036 S 33910 Amycolatopsis mediterranei 0.00 1785 1785 S1 1221524 Amycolatopsis mediterranei RB 0.00 1189 1189 S1 749927 Amycolatopsis mediterranei U32 0.00 768 768 S1 713604 Amycolatopsis mediterranei S699 0.03 2280409 2280409 S 31958 Amycolatopsis orientalis 0.02 2221875 2221875 S 1804986 Amycolatopsis albispora 0.02 2003867 0 S 1814 Amycolatopsis methanolica 0.02 2003867 2003867 S1 1068978 Amycolatopsis methanolica 239 0.02 1506377 1506377 S 208439 Amycolatopsis japonica 0.00 9199 9199 S 346045 Amycolatopsis benzoatilytica 0.16 14436406 134310 G 1847 Pseudonocardia 0.11 10232810 2420046 G1 2619320 unclassified Pseudonocardia 0.02 1861587 1861587 S 2736640 Pseudonocardia sp. Gen01 0.02 1659842 1659842 S 2761535 Pseudonocardia sp. CGMCC 4.1532 0.02 1619381 1619381 S 1690815 Pseudonocardia sp. HH130630-07 0.01 1331197 1331197 S 445576 Pseudonocardia sp. AL041005-10 0.01 1230167 1230167 S 1641402 Pseudonocardia sp. HH130629-09 0.00 68511 68511 S 1096868 Pseudonocardia sp. EC080625-04 0.00 33877 33877 S 1688404 Pseudonocardia sp. EC080610-09 0.00 8202 8202 S 1096856 Pseudonocardia sp. EC080619-01 0.02 2043111 0 S 240495 Pseudonocardia dioxanivorans 0.02 2043111 2043111 S1 675635 Pseudonocardia dioxanivorans CB1190 0.02 2026175 2026175 S 2074 Pseudonocardia autotrophica 0.09 8446753 280758 G 1851 Saccharomonospora 0.02 1730122 0 S 632569 Saccharomonospora marina 0.02 1730122 1730122 S1 882083 Saccharomonospora marina XMU15 0.02 1396766 0 S 40989 Saccharomonospora cyanea 0.02 1396766 1396766 S1 882082 Saccharomonospora cyanea NA-134 0.01 1325931 0 G1 2634184 unclassified Saccharomonospora 0.01 1325931 1325931 S 2528243 Saccharomonospora sp. 31sw 0.01 1269877 0 S 40988 Saccharomonospora azurea 0.01 1269877 1269877 S1 882081 Saccharomonospora azurea NA-128 0.01 1254517 0 S 1852 Saccharomonospora viridis 0.01 1254517 1254517 S1 471857 Saccharomonospora viridis DSM 43017 0.01 1188782 0 S 40990 Saccharomonospora glauca 0.01 1188782 1188782 S1 928724 Saccharomonospora glauca K62 0.09 7995658 570716 G 1835 Saccharopolyspora 0.03 2313904 0 S 1836 Saccharopolyspora erythraea 0.03 2313904 2313904 S1 405948 Saccharopolyspora erythraea NRRL 2338 0.02 1951487 1951487 S 60894 Saccharopolyspora spinosa 0.02 1738242 0 G1 2646250 unclassified Saccharopolyspora 0.02 1738242 1738242 S 2719023 Saccharopolyspora sp. ASAGF58 0.02 1416670 1416670 S 2665642 Saccharopolyspora coralli 0.00 4639 4639 S 543886 Saccharopolyspora endophytica 0.07 5989688 1993872 G 65496 Actinoalloteichus 0.02 1878549 1878549 S 340345 Actinoalloteichus hymeniacidonis 0.02 1807170 1807170 S 1470176 Actinoalloteichus hoggarensis 0.00 169641 0 G1 2644606 unclassified Actinoalloteichus 0.00 169641 169641 S 1612551 Actinoalloteichus sp. GBA129-24 0.00 140456 140456 S 1612552 Actinoalloteichus fjordicus 0.06 5563100 32063 G 2071 Saccharothrix 0.03 2934773 2934773 S 103733 Saccharothrix syringae 0.03 2596264 0 S 103731 Saccharothrix espanaensis 0.03 2596264 2596264 S1 1179773 Saccharothrix espanaensis DSM 44229 0.04 3619954 1931723 G 40566 Actinosynnema 0.02 1434121 1164597 S 42197 Actinosynnema pretiosum 0.00 269524 269524 S1 103721 Actinosynnema pretiosum subsp. pretiosum 0.00 254110 0 S 40567 Actinosynnema mirum 0.00 254110 254110 S1 446462 Actinosynnema mirum DSM 43827 0.04 3521004 0 G 2029 Kibdelosporangium 0.04 3521004 3521004 S 860235 Kibdelosporangium phytohabitans 0.03 2916832 0 G 165301 Lentzea 0.03 2916832 2916832 S 1586287 Lentzea guizhouensis 0.03 2863813 0 G 43356 Kutzneria 0.03 2863813 0 S 43357 Kutzneria albida 0.03 2863813 2863813 S1 1449976 Kutzneria albida DSM 43870 0.03 2495004 0 G 1137960 Allokutzneria 0.03 2495004 2495004 S 211114 Allokutzneria albata 0.02 2151325 0 G 674734 Alloactinosynnema 0.02 2151325 0 G1 2636053 unclassified Alloactinosynnema 0.02 2151325 2151325 S 1653480 Alloactinosynnema sp. L-07 0.02 2110102 0 G 142577 Prauserella 0.02 2110102 2110102 S 530584 Prauserella marina 0.91 82056921 81735 O 85009 Propionibacteriales 0.58 52104488 247683 F 85015 Nocardioidaceae 0.34 30949742 401234 G 1839 Nocardioides 0.22 20076206 230194 G1 2615069 unclassified Nocardioides 0.02 1510474 1510474 S 2486272 Nocardioides sp. WS12 0.02 1462865 1462865 S 196162 Nocardioides sp. JS614 0.02 1392074 1392074 S 2712223 Nocardioides sp. R-3366 0.01 1228783 1228783 S 2589074 Nocardioides sp. KUDC 5002 0.01 1173311 1173311 S 2592334 Nocardioides sp. JQ2195 0.01 1168557 1168557 S 2582905 Nocardioides sp. S-1144 0.01 1166659 1166659 S 2714939 Nocardioides sp. HDW12B 0.01 1155831 1155831 S 110319 Nocardioides sp. CF8 0.01 1140837 1140837 S 2558918 Nocardioides sp. SB3-45 0.01 1124204 1124204 S 2663857 Nocardioides sp. zg-579 0.01 1123314 1123314 S 2662361 Nocardioides sp. dk884 0.01 1086943 1086943 S 2760089 Nocardioides sp. S-713 0.01 1081900 1081900 S 2045452 Nocardioides sp. 78 0.01 1053164 1053164 S 2483798 Nocardioides sp. 603 0.01 1052566 1052566 S 2714938 Nocardioides sp. HDW12A 0.01 964729 964729 S 2575373 Nocardioides sp. dk3136 0.01 959801 959801 S 2500546 Nocardioides sp. HY056 0.02 1674506 1674506 S 449461 Nocardioides humi 0.01 1274912 1274912 S 1643322 Nocardioides ungokensis 0.01 1250280 1250280 S 433659 Nocardioides mesophilus 0.01 1135501 0 S 450734 Nocardioides dokdonensis 0.01 1135501 1135501 S1 1300347 Nocardioides dokdonensis FR1436 0.01 1126871 1126871 S 2518371 Nocardioides seonyuensis 0.01 1119863 1119863 S 2518370 Nocardioides euryhalodurans 0.01 1049417 1049417 S 419476 Nocardioides marinisabuli 0.01 948126 948126 S 402297 Nocardioides daphniae 0.01 892826 892826 S 1804624 Nocardioides baekrokdamisoli 0.08 6849200 55419 G 2040 Aeromicrobium 0.04 3945815 75611 G1 2633570 unclassified Aeromicrobium 0.01 1002094 1002094 S 2079793 Aeromicrobium sp. 592 0.01 998973 998973 S 2107713 Aeromicrobium sp. A1-2 0.01 997920 997920 S 2662028 Aeromicrobium sp. MF47 0.01 871217 871217 S 2663859 Aeromicrobium sp. zg-629 0.01 1012846 1012846 S 2041 Aeromicrobium erythreum 0.01 953613 953613 S 1736691 Aeromicrobium choanae 0.01 881507 0 S 219314 Aeromicrobium marinum 0.01 881507 881507 S1 585531 Aeromicrobium marinum DSM 15272 0.05 4624944 41499 G 182639 Kribbella 0.03 2403094 2403094 S 1544730 Kribbella qitaiheensis 0.02 2180351 0 S 182640 Kribbella flavida 0.02 2180351 2180351 S1 479435 Kribbella flavida DSM 17836 0.03 2576387 5080 G 53387 Friedmanniella 0.01 1324057 1324057 S 546871 Friedmanniella luteola 0.01 1247250 1247250 S 546874 Friedmanniella sagamiharensis 0.02 1896835 0 G 117156 Actinopolymorpha 0.02 1896835 1896835 S 117157 Actinopolymorpha singaporensis 0.02 1502209 0 G 2044 Pimelobacter 0.02 1502209 1502209 S 2045 Pimelobacter simplex 0.01 1226984 0 G 1546255 Mumia 0.01 1226984 0 G1 2621872 unclassified Mumia 0.01 1226984 1226984 S 2708082 Mumia sp. ZJ1417 0.01 1135344 0 G 116071 Micropruina 0.01 1135344 1135344 S 75385 Micropruina glycogenica 0.01 1095160 0 G 86795 Marmoricola 0.01 1095160 1095160 S 642780 Marmoricola scoriae 0.33 29870698 190194 F 31957 Propionibacteriaceae 0.08 6781433 20760 G 29404 Microlunatus 0.03 3012420 5501 G1 2619695 unclassified Microlunatus 0.02 1517632 1517632 S 2596828 Microlunatus sp. KUDC0627 0.02 1489287 1489287 S 2672569 Microlunatus sp. Gsoil 973 0.02 2034587 2034587 S 630515 Microlunatus soli 0.02 1713666 0 S 29405 Microlunatus phosphovorus 0.02 1713666 1713666 S1 1032480 Microlunatus phosphovorus NM-1 0.07 5987478 76656 G 72763 Tessaracoccus 0.01 1123258 1123258 S 1332264 Tessaracoccus aquimaris 0.01 1099821 1099821 S 1285901 Tessaracoccus defluvii 0.01 1000726 1000726 S 399497 Tessaracoccus flavescens 0.01 940527 940527 S 1610493 Tessaracoccus flavus 0.01 910174 0 G1 2635419 unclassified Tessaracoccus 0.01 910174 910174 S 1909732 Tessaracoccus sp. T2.5-30 0.01 836316 836316 S 2161816 Tessaracoccus timonensis 0.05 4098885 140167 G 1912215 Acidipropionibacterium 0.02 1537206 1432583 S 1748 Acidipropionibacterium acidipropionici 0.00 104623 104623 S1 1171373 Acidipropionibacterium acidipropionici ATCC 4875 0.02 1478750 1478750 S 1749 Acidipropionibacterium jensenii 0.01 942762 942762 S 2057246 Acidipropionibacterium virtanenii 0.04 3889847 34308 G 1743 Propionibacterium 0.02 1394710 1335784 S 1744 Propionibacterium freudenreichii 0.00 31081 23004 S1 1752 Propionibacterium freudenreichii subsp. shermanii 0.00 8077 8077 S2 754252 Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 0.00 27845 27845 S1 66712 Propionibacterium freudenreichii subsp. freudenreichii 0.01 866433 866433 S 119981 Propionibacterium australiense 0.01 840292 840292 S 556499 Propionibacterium acidifaciens 0.01 754104 0 G1 2608905 unclassified Propionibacterium 0.01 754104 754104 S 671223 Propionibacterium sp. oral taxon 193 0.04 3209549 43645 G 1912216 Cutibacterium 0.01 1291326 1254040 S 1747 Cutibacterium acnes 0.00 16046 2389 S1 1734925 Cutibacterium acnes subsp. acnes 0.00 6014 6014 S2 1114967 Cutibacterium acnes TypeIA2 P.acn17 0.00 5567 5567 S2 1114969 Cutibacterium acnes TypeIA2 P.acn31 0.00 2076 2076 S2 1114966 Cutibacterium acnes TypeIA2 P.acn33 0.00 9644 9644 S1 1234380 Cutibacterium acnes C1 0.00 3370 0 S1 1905725 Cutibacterium acnes subsp. defendens 0.00 3370 3370 S2 1091045 Cutibacterium acnes subsp. defendens ATCC 11828 0.00 2098 2098 S1 1276648 Cutibacterium acnes hdn-1 0.00 1780 1780 S1 1031709 Cutibacterium acnes 6609 0.00 1762 1762 S1 267747 Cutibacterium acnes KPA171202 0.00 1728 1728 S1 909952 Cutibacterium acnes 266 0.00 846 846 S1 1134454 Cutibacterium acnes HL096PA1 0.00 11 11 S1 1122995 Cutibacterium acnes DSM 1897 0.00 1 1 S1 553199 Cutibacterium acnes SK137 0.01 1227180 785850 S 33010 Cutibacterium avidum 0.00 441330 441330 S1 1170318 Cutibacterium avidum 44067 0.01 647398 647398 S 33011 Cutibacterium granulosum 0.02 1663763 0 G 1912217 Pseudopropionibacterium 0.02 1663763 1663648 S 1750 Pseudopropionibacterium propionicum 0.00 115 115 S1 767029 Pseudopropionibacterium propionicum F0230a 0.01 1290414 0 G 1278221 Auraticoccus 0.01 1290414 1290414 S 675864 Auraticoccus monumenti 0.01 1088875 0 G 1911549 Raineyella 0.01 1088875 0 G1 2662260 unclassified Raineyella 0.01 1088875 1088875 S 2662261 Raineyella sp. CBA3103 0.01 1037218 0 G 1085622 Propioniciclava 0.01 1037218 0 G1 2642922 unclassified Propioniciclava 0.01 1037218 1037218 S 2714937 Propioniciclava sp. HDW11 0.01 633042 0 G 203133 Propionimicrobium 0.01 633042 0 G1 2633994 unclassified Propionimicrobium 0.01 633042 633042 S 1871034 Propionimicrobium sp. Marseille-P3275 0.83 74583107 0 O 85008 Micromonosporales 0.83 74583107 1007868 F 28056 Micromonosporaceae 0.43 38800502 4030013 G 1873 Micromonospora 0.08 7075644 126399 G1 2617518 unclassified Micromonospora 0.02 1587148 1587148 S 2583243 Micromonospora sp. HM134 0.02 1451471 1451471 S 2675222 Micromonospora sp. WMMC415 0.01 1278632 1278632 S 2749844 Micromonospora sp. 28ISP2-46 0.01 1195911 1195911 S 2039870 Micromonospora sp. WMMA2032 0.01 1187682 1187682 S 2201999 Micromonospora sp. B006 0.00 248401 248401 S 648999 Micromonospora sp. L5 0.02 1975431 1975431 S 1877 Micromonospora echinospora 0.02 1672032 1672032 S 307121 Micromonospora krabiensis 0.02 1634206 1634206 S 47853 Micromonospora carbonacea 0.02 1612656 1612656 S 709883 Micromonospora zamorensis 0.02 1586572 1586572 S 356851 Micromonospora chokoriensis 0.02 1565334 1565334 S 285665 Micromonospora coriariae 0.02 1551996 1551996 S 47858 Micromonospora echinofusca 0.02 1546103 1546103 S 1881 Micromonospora viridifaciens 0.02 1545154 1545154 S 47857 Micromonospora echinaurantiaca 0.02 1463584 1463584 S 291594 Micromonospora rifamycinica 0.02 1436059 1436059 S 47865 Micromonospora inositola 0.02 1406520 1406520 S 356852 Micromonospora coxensis 0.02 1401012 1401012 S 261654 Micromonospora auratinigra 0.02 1400747 1400747 S 299146 Micromonospora narathiwatensis 0.02 1395282 1395282 S 47872 Micromonospora purpureochromogenes 0.02 1381654 1381654 S 1914461 Micromonospora terminaliae 0.02 1371546 1371546 S 299152 Micromonospora siamensis 0.01 1041713 1041713 S 479978 Micromonospora tulbaghiae 0.01 703994 406114 S 47850 Micromonospora aurantiaca 0.00 297880 297880 S1 644283 Micromonospora aurantiaca ATCC 27029 0.00 3250 3250 S 47874 Micromonospora rosaria 0.20 18245666 342763 G 1865 Actinoplanes 0.08 7657861 2527425 G1 2626549 unclassified Actinoplanes 0.03 2598960 2598960 S 649831 Actinoplanes sp. N902-109 0.03 2530102 2530102 S 946334 Actinoplanes sp. OR16 0.00 1065 1065 S 134676 Actinoplanes sp. SE50/110 0.00 309 309 S 2033844 Actinoplanes sp. SE50 0.03 3081709 3081709 S 113562 Actinoplanes derwentensis 0.03 2708155 0 S 196914 Actinoplanes friuliensis 0.03 2708155 2708155 S1 1246995 Actinoplanes friuliensis DSM 7358 0.03 2338986 0 S 1866 Actinoplanes missouriensis 0.03 2338986 2338986 S1 512565 Actinoplanes missouriensis 431 0.02 2116192 0 S 1867 Actinoplanes teichomyceticus 0.02 2116192 2116192 S1 457423 Actinoplanes teichomyceticus ATCC 31121 0.06 5400051 157544 G 907364 Phytohabitans 0.03 2642165 2642165 S 624315 Phytohabitans suffuscus 0.03 2600342 2600342 S 1076124 Phytohabitans flavus 0.05 4545617 0 G 673534 Plantactinospora 0.05 4545617 1674384 G1 2631981 unclassified Plantactinospora 0.02 1718327 1718327 S 2024580 Plantactinospora sp. KBS50 0.01 581344 581344 S 2071627 Plantactinospora sp. BB1 0.01 571562 571562 S 2108470 Plantactinospora sp. BC1 0.04 3578075 30335 G 84593 Verrucosispora 0.02 1824205 0 G1 2630859 unclassified Verrucosispora 0.02 1824205 1824205 S 2742132 Verrucosispora sp. NA02020 0.02 1723535 0 S 1003110 Verrucosispora maris 0.02 1723535 1723535 S1 263358 Verrucosispora maris AB-18-032 0.03 3003480 70930 G 168694 Salinispora 0.02 1548853 0 S 168697 Salinispora arenicola 0.02 1548853 1548853 S1 391037 Salinispora arenicola CNS-205 0.02 1383697 0 S 168695 Salinispora tropica 0.02 1383697 1383697 S1 369723 Salinispora tropica CNB-440 0.00 1848 0 G 56433 Couchioplanes 0.00 1848 0 S 56438 Couchioplanes caeruleus 0.00 1848 1848 S1 56428 Couchioplanes caeruleus subsp. azureus 0.39 35585881 53983 O 85012 Streptosporangiales 0.15 13480488 52254 F 2012 Thermomonosporaceae 0.13 11885500 165791 G 1988 Actinomadura 0.08 7329532 118667 G1 2626254 unclassified Actinomadura 0.03 2476609 2476609 S 2591108 Actinomadura sp. WMMA1423 0.03 2371093 2371093 S 1219491 Actinomadura sp. WMMB 499 0.03 2363163 2363163 S 2742128 Actinomadura sp. NAK00032 0.03 2584843 2584843 S 46165 Actinomadura verrucosospora 0.02 1805334 1805334 S 1411117 Actinomadura amylolytica 0.02 1542734 0 G 2019 Thermomonospora 0.02 1542734 0 S 2020 Thermomonospora curvata 0.02 1542734 1542734 S1 471852 Thermomonospora curvata DSM 43183 0.14 13082260 38513 F 2004 Streptosporangiaceae 0.08 6832661 18 G 83681 Nonomuraea 0.08 6817964 104787 G1 2593643 unclassified Nonomuraea 0.04 3578521 3578521 S 1909395 Nonomuraea sp. ATCC 55076 0.03 3134656 3134656 S 2656914 Nonomuraea sp. WYY166 0.00 14679 14679 S 93944 Nonomuraea gerenzanensis 0.07 6206665 100370 G 2000 Streptosporangium 0.04 3240558 0 G1 2632669 unclassified Streptosporangium 0.04 3240558 3240558 S 2202249 Streptosporangium sp. 'caverna' 0.03 2865737 0 S 2001 Streptosporangium roseum 0.03 2865737 2865737 S1 479432 Streptosporangium roseum DSM 43021 0.00 4421 0 G 29298 Planobispora 0.00 4421 4421 S 35762 Planobispora rosea 0.10 8969150 22140 F 83676 Nocardiopsaceae 0.07 6220824 36599 G 2013 Nocardiopsis 0.03 2645962 2644594 S 2014 Nocardiopsis dassonvillei 0.00 1368 0 S1 568208 Nocardiopsis dassonvillei subsp. dassonvillei 0.00 1368 1368 S2 446468 Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 0.02 1797584 0 S 280236 Nocardiopsis gilva 0.02 1797584 1797584 S1 1235441 Nocardiopsis gilva YIM 90087 0.02 1735069 0 S 53437 Nocardiopsis alba 0.02 1735069 1735069 S1 1205910 Nocardiopsis alba ATCC BAA-2165 0.00 5610 0 G1 2649073 unclassified Nocardiopsis 0.00 5610 5610 S 373213 Nocardiopsis sp. 90127 0.02 1619788 0 G 104204 Streptomonospora 0.02 1619788 0 G1 2635841 unclassified Streptomonospora 0.02 1619788 1619788 S 2498135 Streptomonospora sp. M2 0.01 1106398 0 G 83677 Thermobifida 0.01 1106398 0 S 2021 Thermobifida fusca 0.01 1106398 1106398 S1 269800 Thermobifida fusca YX 0.34 30921851 0 O 2037 Actinomycetales 0.34 30921851 40004 F 2049 Actinomycetaceae 0.19 17576205 1143541 G 1654 Actinomyces 0.10 8789879 449548 G1 2609248 unclassified Actinomyces 0.01 974583 974583 S 712122 Actinomyces sp. oral taxon 414 0.01 916998 916998 S 2081702 Actinomyces sp. oral taxon 897 0.01 909543 909543 S 2079536 Actinomyces sp. Z16 0.01 871769 871769 S 2560010 Actinomyces sp. dk561 0.01 811818 811818 S 2057798 Actinomyces sp. 432 0.01 766297 766297 S 2057743 Actinomyces sp. 299 0.01 753889 753889 S 2321394 Actinomyces sp. 2129 0.01 679294 0 S 706438 Actinomyces sp. oral taxon 171 0.01 679294 679294 S1 706439 Actinomyces sp. oral taxon 171 str. F0337 0.01 628026 628026 S 1851395 Actinomyces sp. Chiba101 0.01 534869 534869 S 712116 Actinomyces sp. oral taxon 169 0.01 493245 493245 S 2737173 Actinomyces sp. zg-325 0.01 1072344 1072344 S 2057800 Actinomyces qiguomingii 0.01 909142 909142 S 52774 Actinomyces slackii 0.01 874972 874972 S 52771 Actinomyces howellii 0.01 857158 857158 S 1656 Actinomyces viscosus 0.01 805647 805647 S 111015 Actinomyces radicidentis 0.01 787470 787470 S 1659 Actinomyces israelii 0.01 702379 702379 S 1912795 Actinomyces tangfeifanii 0.01 598694 598694 S 1852377 Actinomyces pacaensis 0.01 493686 493686 S 1960083 Actinomyces gaoshouyii 0.00 272570 272570 S 1655 Actinomyces naeslundii 0.00 268723 268723 S 544580 Actinomyces oris 0.04 3312825 15716 G 2529408 Schaalia 0.01 1239728 1239728 S 1660 Schaalia odontolytica 0.01 759494 0 G1 2691889 unclassified Schaalia 0.01 759494 759494 S 2758572 Schaalia sp. JY-X169 0.01 686515 0 S 181487 Schaalia cardiffensis 0.01 686515 686515 S1 888050 Schaalia cardiffensis F0333 0.01 611372 611372 S 52773 Schaalia meyeri 0.03 2704199 26712 G 28263 Arcanobacterium 0.02 1423972 27 G1 2631020 unclassified Arcanobacterium 0.01 829840 829840 S 2758440 Arcanobacterium sp. JY-X040 0.01 594105 594105 S 2722751 Arcanobacterium sp. 2701 0.01 653464 653414 S 28264 Arcanobacterium haemolyticum 0.00 50 50 S1 644284 Arcanobacterium haemolyticum DSM 20595 0.01 600051 600051 S 131112 Arcanobacterium phocae 0.03 2360700 8883 G 1522056 Flaviflexus 0.02 1595348 2707 G1 2623556 unclassified Flaviflexus 0.01 884194 884194 S 2496867 Flaviflexus sp. H23T48 0.01 708447 708447 S 2758573 Flaviflexus sp. dk850 0.01 756469 756469 S 1282737 Flaviflexus salsibiostraticola 0.02 2097526 915 G 1069494 Trueperella 0.02 1452876 1406616 S 1661 Trueperella pyogenes 0.00 46260 46260 S1 1435056 Trueperella pyogenes TP8 0.01 643735 643735 S 312285 Trueperella bialowiezensis 0.01 873030 0 G 76833 Actinobaculum 0.01 873030 0 G1 2609299 unclassified Actinobaculum 0.01 873030 873030 S 2495645 Actinobaculum sp. 313 0.01 682681 0 G 2050 Mobiluncus 0.01 682681 0 S 2051 Mobiluncus curtisii 0.01 682681 682681 S1 548479 Mobiluncus curtisii ATCC 43063 0.01 674065 0 G 1653174 Actinotignum 0.01 674065 674065 S 59505 Actinotignum schaalii 0.01 600616 0 G 2740557 Pauljensenia 0.01 600616 600616 S 178339 Pauljensenia hongkongensis 0.23 20863281 0 O 85004 Bifidobacteriales 0.23 20863281 9635 F 31953 Bifidobacteriaceae 0.20 18136387 1796875 G 1678 Bifidobacterium 0.03 2434191 1901632 S 216816 Bifidobacterium longum 0.00 305439 281881 S1 1682 Bifidobacterium longum subsp. infantis 0.00 23543 23543 S2 565040 Bifidobacterium longum subsp. infantis 157F 0.00 15 15 S2 391904 Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 0.00 171778 111469 S1 1679 Bifidobacterium longum subsp. longum 0.00 22127 22127 S2 1300227 Bifidobacterium longum subsp. longum GT15 0.00 14782 14782 S2 890402 Bifidobacterium longum subsp. longum BBMN68 0.00 12325 12325 S2 1035817 Bifidobacterium longum subsp. longum KACC 91563 0.00 10690 10690 S2 722911 Bifidobacterium longum subsp. longum F8 0.00 327 327 S2 759350 Bifidobacterium longum subsp. longum JDM301 0.00 26 26 S2 565042 Bifidobacterium longum subsp. longum JCM 1217 0.00 25 25 S2 1457186 Bifidobacterium longum subsp. longum EK13 0.00 7 7 S2 1457184 Bifidobacterium longum subsp. longum 72B 0.00 19162 19162 S1 206672 Bifidobacterium longum NCC2705 0.00 18684 18684 S1 1322347 Bifidobacterium longum E18 0.00 17496 17496 S1 205913 Bifidobacterium longum DJO10A 0.02 1735418 1627496 S 1685 Bifidobacterium breve 0.00 62612 62612 S1 1385940 Bifidobacterium breve JCM 7019 0.00 12443 12443 S1 1385942 Bifidobacterium breve 689b 0.00 10272 10272 S1 866777 Bifidobacterium breve ACS-071-V-Sch8b 0.00 8835 8835 S1 1385938 Bifidobacterium breve 12L 0.00 8453 8453 S1 1385939 Bifidobacterium breve JCM 7017 0.00 5123 5123 S1 936351 Bifidobacterium breve S27 0.00 162 162 S1 1385941 Bifidobacterium breve NCFB 2258 0.00 22 22 S1 518634 Bifidobacterium breve DSM 20213 = JCM 1192 0.01 1299065 1213475 S 1680 Bifidobacterium adolescentis 0.00 85590 85590 S1 367928 Bifidobacterium adolescentis ATCC 15703 0.01 1159298 398322 S 1686 Bifidobacterium catenulatum 0.01 760976 332122 S1 630129 Bifidobacterium catenulatum subsp. kashiwanohense 0.00 332333 332333 S2 1447716 Bifidobacterium kashiwanohense PV20-2 0.00 96521 96521 S2 1150460 Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854 0.01 1107175 588384 S 28025 Bifidobacterium animalis 0.00 451122 451025 S1 302912 Bifidobacterium animalis subsp. animalis 0.00 97 97 S2 703613 Bifidobacterium animalis subsp. animalis ATCC 25527 0.00 67669 1061 S1 302911 Bifidobacterium animalis subsp. lactis 0.00 58514 58514 S2 1167629 Bifidobacterium animalis subsp. lactis ATCC 27673 0.00 2829 2829 S2 1316911 Bifidobacterium animalis subsp. lactis KLDS2.0603 0.00 1986 1986 S2 552531 Bifidobacterium animalis subsp. lactis BB-12 0.00 1913 1913 S2 442563 Bifidobacterium animalis subsp. lactis AD011 0.00 595 595 S2 1042403 Bifidobacterium animalis subsp. lactis CNCM I-2494 0.00 344 344 S2 1281781 Bifidobacterium animalis subsp. lactis Bl12 0.00 163 163 S2 1075106 Bifidobacterium animalis subsp. lactis BLC1 0.00 105 105 S2 573236 Bifidobacterium animalis subsp. lactis V9 0.00 76 76 S2 742729 Bifidobacterium animalis subsp. lactis Bi-07 0.00 63 63 S2 1168290 Bifidobacterium animalis subsp. lactis B420 0.00 20 20 S2 580050 Bifidobacterium animalis subsp. lactis Bl-04 0.01 1097831 989163 S 1681 Bifidobacterium bifidum 0.00 39913 39913 S1 702459 Bifidobacterium bifidum PRL2010 0.00 38513 38513 S1 883062 Bifidobacterium bifidum S17 0.00 30222 30222 S1 484020 Bifidobacterium bifidum BGN4 0.00 20 20 S1 500634 Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 0.01 1024534 606076 S 1694 Bifidobacterium pseudolongum 0.00 250420 1508 S1 1690 Bifidobacterium pseudolongum subsp. globosum 0.00 248912 248912 S2 1410605 Bifidobacterium pseudolongum subsp. globosum DSM 20092 0.00 168038 168038 S1 1447715 Bifidobacterium pseudolongum PV8-2 0.01 895162 0 S 158787 Bifidobacterium scardovii 0.01 895162 895162 S1 1150461 Bifidobacterium scardovii JCM 12489 = DSM 13734 0.01 766137 766039 S 1689 Bifidobacterium dentium 0.00 80 80 S1 401473 Bifidobacterium dentium Bd1 0.00 18 18 S1 1150423 Bifidobacterium dentium JCM 1195 = DSM 20436 0.01 734829 574106 S 1683 Bifidobacterium angulatum 0.00 160723 160723 S1 518635 Bifidobacterium angulatum DSM 20098 = JCM 7096 0.01 690925 690925 S 33905 Bifidobacterium thermophilum 0.01 674563 674563 S 78344 Bifidobacterium gallinarum 0.01 670014 669350 S 1684 Bifidobacterium asteroides 0.00 579 579 S1 1437594 Bifidobacterium asteroides DSM 20089 0.00 85 85 S1 1147128 Bifidobacterium asteroides PRL2011 0.01 622659 622659 S 35760 Bifidobacterium choerinum 0.01 568851 0 S 638619 Bifidobacterium actinocoloniiforme 0.01 568851 568851 S1 1437605 Bifidobacterium actinocoloniiforme DSM 22766 0.01 532834 398820 S 28026 Bifidobacterium pseudocatenulatum 0.00 134014 134014 S1 547043 Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 0.00 165888 165888 S 1687 Bifidobacterium coryneforme 0.00 159991 0 S 1691 Bifidobacterium indicum 0.00 159991 159991 S1 1341694 Bifidobacterium indicum LMG 11587 = DSM 20214 0.00 147 0 G1 2608897 unclassified Bifidobacterium 0.00 147 147 S 359132 Bifidobacterium sp. A24 0.02 1555779 0 G 2701 Gardnerella 0.02 1555779 1401118 S 2702 Gardnerella vaginalis 0.00 85232 85232 S1 553190 Gardnerella vaginalis 409-05 0.00 68738 68738 S1 1009464 Gardnerella vaginalis HMP9231 0.00 562 562 S1 525284 Gardnerella vaginalis ATCC 14019 0.00 129 129 S1 585528 Gardnerella vaginalis ATCC 14018 = JCM 11026 0.01 595004 0 G 196082 Parascardovia 0.01 595004 0 S 78258 Parascardovia denticolens 0.01 595004 595004 S1 864564 Parascardovia denticolens DSM 10105 = JCM 12538 0.01 566476 0 G 196081 Scardovia 0.01 566476 0 S 78259 Scardovia inopinata 0.01 566476 566476 S1 1150468 Scardovia inopinata JCM 12537 0.16 14806859 38379 O 85013 Frankiales 0.15 13524145 478 F 74712 Frankiaceae 0.13 12086113 348920 G 1854 Frankia 0.05 4372892 5141 G1 2632575 unclassified Frankia 0.03 2543236 2543236 S 298653 Frankia sp. EAN1pec 0.02 1824515 1824515 S 710111 Frankia sp. QA3 0.03 2529589 2529589 S 298654 Frankia inefficax 0.02 1793454 0 S 1859 Frankia alni 0.02 1793454 1793454 S1 326424 Frankia alni ACN14a 0.02 1536521 1536521 S 106370 Frankia casuarinae 0.02 1498901 1498901 S 2716812 Candidatus Frankia datiscae 0.00 5836 5836 S 1856 Frankia torreyi 0.02 1437554 0 G 1434010 Jatrophihabitans 0.02 1437554 0 G1 2629395 unclassified Jatrophihabitans 0.02 1437554 1437554 S 1907575 Jatrophihabitans sp. GAS493 0.01 1244335 0 O1 1920255 unclassified Frankiales 0.01 1244335 1244335 S 1882833 Frankineae bacterium MT45 0.07 5899006 0 O 1643684 Nakamurellales 0.07 5899006 0 F 85031 Nakamurellaceae 0.07 5899006 13957 G 53460 Nakamurella 0.03 2707980 202 G1 2618968 unclassified Nakamurella 0.02 1646641 1646641 S 2762325 Nakamurella sp. PAMC28650 0.01 1061137 1061137 S 1902245 Nakamurella sp. s14-144 0.02 1688344 0 S 53461 Nakamurella multipartita 0.02 1688344 1688344 S1 479431 Nakamurella multipartita DSM 44233 0.02 1488725 1488725 S 1090615 Nakamurella panacisegetis 0.05 4816463 0 O 2039638 Candidatus Nanopelagicales 0.05 4816463 3435 F 2162846 Candidatus Nanopelagicaceae 0.04 3671895 24893 G 622681 Candidatus Planktophila 0.01 920466 920466 S 1884905 Candidatus Planktophila versatilis 0.01 861787 861787 S 1884913 Candidatus Planktophila lacus 0.01 685582 685582 S 1884914 Candidatus Planktophila dulcis 0.00 422311 422311 S 573600 Candidatus Planktophila limnetica 0.00 390631 390631 S 1884904 Candidatus Planktophila sulfonica 0.00 366225 366225 S 1884907 Candidatus Planktophila vernalis 0.01 1141133 16818 G 2039639 Candidatus Nanopelagicus 0.00 381742 381742 S 1884634 Candidatus Nanopelagicus limnes 0.00 379377 379377 S 1884915 Candidatus Nanopelagicus hibericus 0.00 363196 363196 S 1884916 Candidatus Nanopelagicus abundans 0.05 4394097 0 O 1643682 Geodermatophilales 0.05 4394097 40935 F 85030 Geodermatophilaceae 0.02 1533550 0 G 88138 Modestobacter 0.02 1533550 1533550 S 477641 Modestobacter marinus 0.02 1458839 0 G 1860 Geodermatophilus 0.02 1458839 0 S 1861 Geodermatophilus obscurus 0.02 1458839 1458839 S1 526225 Geodermatophilus obscurus DSM 43160 0.02 1360773 0 G 38501 Blastococcus 0.02 1360773 0 S 138336 Blastococcus saxobsidens 0.02 1360773 1360773 S1 1146883 Blastococcus saxobsidens DD2 0.05 4088467 0 O 1217098 Jiangellales 0.05 4088467 0 F 1217100 Jiangellaceae 0.05 4088467 170466 G 281472 Jiangella 0.02 1995046 1995046 S 419479 Jiangella alkaliphila 0.02 1922955 0 G1 2624397 unclassified Jiangella 0.02 1922955 1922955 S 1798224 Jiangella sp. DSM 45060 0.03 3078554 0 O 414714 Catenulisporales 0.03 3078554 0 F 414877 Catenulisporaceae 0.03 3078554 0 G 414878 Catenulispora 0.03 3078554 0 S 304895 Catenulispora acidiphila 0.03 3078554 3078554 S1 479433 Catenulispora acidiphila DSM 44928 0.03 2354031 3 C1 52018 unclassified Actinobacteria (class) 0.02 1559621 1559621 S 2487353 Actinobacteria bacterium YIM 96077 0.01 794407 794407 S 1650658 Actinobacteria bacterium IMCC26256 0.02 2084259 0 O 85014 Glycomycetales 0.02 2084259 0 F 85034 Glycomycetaceae 0.02 2084259 0 G 283810 Stackebrandtia 0.02 2084259 0 S 283811 Stackebrandtia nassauensis 0.02 2084259 2084259 S1 446470 Stackebrandtia nassauensis DSM 44728 0.02 1588222 0 O 622450 Actinopolysporales 0.02 1588222 0 F 622451 Actinopolysporaceae 0.02 1588222 0 G 1849 Actinopolyspora 0.02 1588222 1588222 S 414996 Actinopolyspora erythraea 0.02 1366860 0 O 622452 Kineosporiales 0.02 1366860 0 F 83778 Kineosporiaceae 0.02 1366860 0 G 33981 Kineococcus 0.02 1366860 0 S 131568 Kineococcus radiotolerans 0.02 1366860 1366860 S1 266940 Kineococcus radiotolerans SRS30216 = ATCC BAA-149 0.01 1207322 0 O 2495578 Sporichthyales 0.01 1207322 0 F 85033 Sporichthyaceae 0.01 1207322 0 G 2078948 Epidermidibacterium 0.01 1207322 1207322 S 1891644 Epidermidibacterium keratini 0.01 1151344 0 C1 1643818 Actinobacteria incertae sedis 0.01 1151344 0 G 147067 Thermobispora 0.01 1151344 0 S 2006 Thermobispora bispora 0.01 1151344 1151344 S1 469371 Thermobispora bispora DSM 43833 0.01 752554 0 O 1643683 Acidothermales 0.01 752554 0 F 85032 Acidothermaceae 0.01 752554 0 G 28048 Acidothermus 0.01 752554 0 S 28049 Acidothermus cellulolyticus 0.01 752554 752554 S1 351607 Acidothermus cellulolyticus 11B 0.20 17912568 39099 C 84998 Coriobacteriia 0.11 9789063 0 O 1643822 Eggerthellales 0.11 9789063 177383 F 1643826 Eggerthellaceae 0.02 2253228 11472 G 84111 Eggerthella 0.01 1290837 1018180 S 84112 Eggerthella lenta 0.00 272657 272657 S1 479437 Eggerthella lenta DSM 2243 0.01 950919 0 G1 2648737 unclassified Eggerthella 0.01 950919 950919 S 502558 Eggerthella sp. YY7918 0.02 1638712 231913 G 644652 Gordonibacter 0.01 704541 704541 S 1335613 Gordonibacter urolithinfaciens 0.01 702258 0 S 471189 Gordonibacter pamelaeae 0.01 702258 702258 S1 657308 Gordonibacter pamelaeae 7-10-1-b 0.02 1499549 241135 G 447020 Adlercreutzia 0.01 629415 0 S 446660 Adlercreutzia equolifaciens 0.01 629415 629415 S1 1384484 Adlercreutzia equolifaciens DSM 19450 0.01 628999 0 G1 2636013 unclassified Adlercreutzia 0.01 628999 628999 S 2707299 Adlercreutzia sp. 8CFCBH1 0.01 996859 0 G 84108 Slackia 0.01 996859 996679 S 84110 Slackia heliotrinireducens 0.00 180 180 S1 471855 Slackia heliotrinireducens DSM 20476 0.01 951259 0 G 2005386 Arabia 0.01 951259 951259 S 1870985 Arabia massiliensis 0.01 759199 0 G 79603 Denitrobacterium 0.01 759199 759199 S 79604 Denitrobacterium detoxificans 0.01 549277 0 F1 1720314 unclassified Eggerthellaceae 0.01 549277 549277 S 2734634 Eggerthellaceae bacterium zg-1050 0.01 515785 0 G 84162 Cryptobacterium 0.01 515785 0 S 84163 Cryptobacterium curtum 0.01 515785 515785 S1 469378 Cryptobacterium curtum DSM 15641 0.00 447812 0 G 1981050 Phoenicibacter 0.00 447812 447812 S 1944646 Phoenicibacter congonensis 0.09 8084406 14998 O 84999 Coriobacteriales 0.06 5186806 718746 F 1643824 Atopobiaceae 0.03 2955635 8478 G 133925 Olsenella 0.02 1608069 443 G1 2638792 unclassified Olsenella 0.01 984855 984855 S 712411 Olsenella sp. oral taxon 807 0.01 622771 622771 S 2109685 Olsenella sp. GAM18 0.01 700542 700542 S 604330 Olsenella umbonata 0.01 638546 0 S 133926 Olsenella uli 0.01 638546 638546 S1 633147 Olsenella uli DSM 7084 0.01 541925 0 G 1935188 Libanicoccus 0.01 541925 541925 S 1871022 Libanicoccus massiliensis 0.01 495420 0 G 2767353 Lancefieldella 0.01 495420 0 S 1382 Lancefieldella parvula 0.01 495420 495420 S1 521095 Atopobium parvulum DSM 20469 0.01 475080 0 G 2082587 Parolsenella 0.01 475080 475080 S 2003188 Parolsenella catena 0.03 2882602 826 F 84107 Coriobacteriaceae 0.02 1617354 0 G 102106 Collinsella 0.02 1617354 1617354 S 74426 Collinsella aerofaciens 0.01 666871 0 G 33870 Coriobacterium 0.01 666871 0 S 33871 Coriobacterium glomerans 0.01 666871 666871 S1 700015 Coriobacterium glomerans PW2 0.01 597551 0 F1 84113 unclassified Coriobacteriaceae 0.01 597551 597551 S 1531429 Coriobacteriaceae bacterium 68-1-3 0.09 8069050 0 C 84995 Rubrobacteria 0.09 8069050 267 O 84996 Rubrobacterales 0.07 6602915 0 F 84997 Rubrobacteraceae 0.07 6602915 24797 G 42255 Rubrobacter 0.03 2802214 5401 G1 2637691 unclassified Rubrobacter 0.02 1431765 1431765 S 2653851 Rubrobacter sp. SCSIO 52909 0.02 1365048 1365048 S 2653852 Rubrobacter sp. SCSIO 52915 0.02 1804898 934756 S 49319 Rubrobacter xylanophilus 0.01 870142 870142 S1 266117 Rubrobacter xylanophilus DSM 9941 0.01 1006524 1006524 S 42256 Rubrobacter radiotolerans 0.01 964482 964482 S 2051957 Rubrobacter indicoceani 0.02 1465868 0 F 2600303 Baekduiaceae 0.02 1465868 0 G 2600304 Baekduia 0.02 1465868 1465868 S 496014 Baekduia soli 0.05 4557330 1265 C 908620 Nitriliruptoria 0.02 1961924 0 O 908621 Euzebyales 0.02 1961924 0 F 908622 Euzebyaceae 0.02 1961924 0 G 908623 Euzebya 0.02 1961924 0 G1 2649358 unclassified Euzebya 0.02 1961924 1961924 S 1608957 Euzebya sp. DY32-46 0.02 1409247 0 O 1747768 Egibacterales 0.02 1409247 0 F 1747769 Egibacteraceae 0.02 1409247 0 G 1747770 Egibacter 0.02 1409247 1409247 S 1670831 Egibacter rhizosphaerae 0.01 1184894 0 O 1755823 Egicoccales 0.01 1184894 0 F 1755824 Egicoccaceae 0.01 1184894 0 G 1755825 Egicoccus 0.01 1184894 1184894 S 1670830 Egicoccus halophilus 0.04 3279980 0 C 84992 Acidimicrobiia 0.04 3279980 868 O 84993 Acidimicrobiales 0.02 1497469 0 F 2448023 Ilumatobacteraceae 0.02 1497469 0 G 682522 Ilumatobacter 0.02 1497469 0 S 467094 Ilumatobacter coccineus 0.02 1497469 1497469 S1 1313172 Ilumatobacter coccineus YM16-304 0.01 1115687 0 F 633392 Iamiaceae 0.01 1115687 0 F1 2562118 unclassified Iamiaceae 0.01 1115687 1115687 S 2664374 Iamiaceae bacterium SCSIO 58843 0.01 665956 0 F 84994 Acidimicrobiaceae 0.01 665956 0 G 53634 Acidimicrobium 0.01 665956 0 S 53635 Acidimicrobium ferrooxidans 0.01 665956 665956 S1 525909 Acidimicrobium ferrooxidans DSM 10331 0.02 1759379 1340 P1 1752188 unclassified Actinobacteria 0.01 498167 498167 S 1848755 Actinobacteria bacterium IMCC26077 0.01 452354 452354 S 1848756 Actinobacteria bacterium IMCC26103 0.00 412596 412596 S 1848754 Actinobacteria bacterium IMCC19121 0.00 394922 394922 S 1848255 Actinobacteria bacterium IMCC25003 0.02 1733338 0 C 1497346 Thermoleophilia 0.02 1733338 0 O 588673 Solirubrobacterales 0.02 1733338 0 F 320583 Conexibacteraceae 0.02 1733338 0 G 191494 Conexibacter 0.02 1733338 0 S 191495 Conexibacter woesei 0.02 1733338 1733338 S1 469383 Conexibacter woesei DSM 14684 11.79 1063576634 946204 P 1239 Firmicutes 8.44 761214994 527622 C 91061 Bacilli 5.89 531387663 802468 O 1385 Bacillales 2.69 242748727 5812845 F 186817 Bacillaceae 1.64 148156722 20977837 G 1386 Bacillus 0.38 34255897 9937811 G1 86661 Bacillus cereus group 0.09 8398534 4654503 S 1396 Bacillus cereus 0.01 1192619 1192619 S1 526986 Bacillus cereus Rock3-44 0.00 217931 217931 S1 288681 Bacillus cereus E33L 0.00 204749 204749 S1 526983 Bacillus cereus Rock3-28 0.00 190010 190010 S1 526988 Bacillus cereus Rock4-18 0.00 132347 132347 S1 526980 Bacillus cereus ATCC 10876 0.00 123554 123554 S1 405531 Bacillus cereus G9842 0.00 115352 115352 S1 222523 Bacillus cereus ATCC 10987 0.00 108100 108100 S1 526992 Bacillus cereus AH1271 0.00 107312 107312 S1 526989 Bacillus cereus F65185 0.00 104420 104420 S1 1003239 Bacillus cereus C1L 0.00 91045 91045 S1 361100 Bacillus cereus Q1 0.00 87636 0 S1 1179100 Bacillus cereus biovar anthracis 0.00 87636 87636 S2 637380 Bacillus cereus biovar anthracis str. CI 0.00 87554 87554 S1 526970 Bacillus cereus BGSC 6E1 0.00 86110 86110 S1 526984 Bacillus cereus Rock3-29 0.00 82704 82704 S1 526985 Bacillus cereus Rock3-42 0.00 76537 76537 S1 1126681 Bacillus cereus F 0.00 74736 74736 S1 526987 Bacillus cereus Rock4-2 0.00 73443 73443 S1 526973 Bacillus cereus m1293 0.00 66524 66524 S1 1217984 Bacillus cereus FRI-35 0.00 62319 62319 S1 526991 Bacillus cereus AH676 0.00 62055 62055 S1 526981 Bacillus cereus Rock1-3 0.00 58206 58206 S1 572264 Bacillus cereus 03BB102 0.00 56514 56514 S1 526967 Bacillus cereus 172560W 0.00 51636 51636 S1 526982 Bacillus cereus Rock1-15 0.00 46537 46537 S1 405532 Bacillus cereus B4264 0.00 42094 42094 S1 405535 Bacillus cereus AH820 0.00 31348 31348 S1 526969 Bacillus cereus m1550 0.00 29043 29043 S1 347495 Bacillus cereus F837/76 0.00 19500 19500 S1 526974 Bacillus cereus BDRD-ST24 0.00 15446 15446 S1 226900 Bacillus cereus ATCC 14579 0.00 11558 11558 S1 526979 Bacillus cereus 95/8201 0.00 11492 11492 S1 405534 Bacillus cereus AH187 0.00 6651 6651 S1 526978 Bacillus cereus BDRD-Cer4 0.00 5075 5075 S1 870739 Bacillus cereus VPC1401 0.00 4219 4219 S1 526993 Bacillus cereus AH1272 0.00 2911 2911 S1 526994 Bacillus cereus AH1273 0.00 2418 2418 S1 334406 Bacillus cereus NC7401 0.00 720 720 S1 526977 Bacillus cereus ATCC 4342 0.00 572 572 S1 526976 Bacillus cereus BDRD-ST196 0.00 492 492 S1 1454382 Bacillus cereus D17 0.00 313 313 S1 451709 Bacillus cereus 03BB108 0.00 229 229 S1 269801 Bacillus cereus G9241 0.08 6800292 3957355 S 1428 Bacillus thuringiensis 0.01 543323 439265 S1 257985 Bacillus thuringiensis serovar andalousiensis 0.00 104058 104058 S2 527032 Bacillus thuringiensis serovar andalousiensis BGSC 4AW1 0.00 310419 310419 S1 1195464 Bacillus thuringiensis MC28 0.00 283817 283817 S1 527019 Bacillus thuringiensis IBL 200 0.00 182522 0 S1 180882 Bacillus thuringiensis serovar monterrey 0.00 182522 182522 S2 527022 Bacillus thuringiensis serovar monterrey BGSC 4AJ1 0.00 152099 152099 S1 527021 Bacillus thuringiensis Bt407 0.00 140270 140270 S1 529122 Bacillus thuringiensis YBT-1518 0.00 139149 139149 S1 1423143 Bacillus thuringiensis Bt18247 0.00 136872 0 S1 180869 Bacillus thuringiensis serovar pakistani 0.00 136872 136872 S2 527027 Bacillus thuringiensis serovar pakistani str. T13001 0.00 134270 134270 S1 1218175 Bacillus thuringiensis HD-771 0.00 116481 116481 S1 1442 Bacillus thuringiensis serovar tolworthi 0.00 110490 0 S1 180854 Bacillus thuringiensis serovar huazhongensis 0.00 110490 110490 S2 527030 Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 0.00 103976 0 S1 180877 Bacillus thuringiensis serovar pulsiensis 0.00 103976 103976 S2 527028 Bacillus thuringiensis serovar pulsiensis BGSC 4CC1 0.00 85047 85047 S1 180850 Bacillus thuringiensis serovar indiana 0.00 83854 2122 S1 29339 Bacillus thuringiensis serovar kurstaki 0.00 43252 43252 S2 714359 Bacillus thuringiensis BMB171 0.00 18408 18408 S2 1261129 Bacillus thuringiensis serovar kurstaki str. HD-1 0.00 17293 17293 S2 570416 Bacillus thuringiensis serovar kurstaki str. YBT-1520 0.00 2286 2286 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 0.00 493 493 S2 527023 Bacillus thuringiensis serovar kurstaki str. T03a001 0.00 76638 76638 S1 1257079 Bacillus thuringiensis DAR 81934 0.00 76113 76113 S1 1440 Bacillus thuringiensis serovar alesti 0.00 64724 64724 S1 29338 Bacillus thuringiensis serovar galleriae 0.00 63540 63540 S1 1441 Bacillus thuringiensis serovar morrisoni 0.00 19782 19782 S1 1417985 Bacillus thuringiensis LM1212 0.00 5885 3511 S1 1444 Bacillus thuringiensis serovar tenebrionis 0.00 2374 2374 S2 529121 Bacillus thuringiensis serovar tenebrionis str. YBT-1765 0.00 5704 0 S1 1001229 Bacillus thuringiensis serovar chinensis 0.00 5704 5704 S2 541229 Bacillus thuringiensis serovar chinensis CT-43 0.00 2256 832 S1 1432 Bacillus thuringiensis serovar thuringiensis 0.00 968 968 S2 1286404 Bacillus thuringiensis serovar thuringiensis str. IS5056 0.00 456 456 S2 527025 Bacillus thuringiensis serovar thuringiensis str. T01001 0.00 1636 1636 S1 132264 Bacillus thuringiensis serovar darmstadiensis 0.00 1127 1127 S1 527020 Bacillus thuringiensis IBL 4222 0.00 966 966 S1 1436 Bacillus thuringiensis serovar entomocidus 0.00 733 733 S1 1430 Bacillus thuringiensis serovar israelensis 0.00 423 0 S1 180874 Bacillus thuringiensis serovar pondicheriensis 0.00 423 423 S2 527029 Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1 0.00 303 0 S1 1434 Bacillus thuringiensis serovar berliner 0.00 303 303 S2 527031 Bacillus thuringiensis serovar berliner ATCC 10792 0.00 135 0 S1 180856 [Bacillus thuringiensis] serovar konkukian 0.00 135 135 S2 281309 [Bacillus thuringiensis] serovar konkukian str. 97-27 0.00 109 109 S1 1217737 Bacillus thuringiensis HD-789 0.00 97 97 S1 412694 Bacillus thuringiensis str. Al Hakam 0.00 83 83 S1 1433 Bacillus thuringiensis serovar aizawai 0.00 80 80 S1 1452729 Bacillus thuringiensis HD1002 0.00 8 8 S1 180865 Bacillus thuringiensis serovar rongseni 0.00 6 6 S1 180855 Bacillus thuringiensis serovar canadensis 0.02 2241900 2011718 S 64104 Bacillus pseudomycoides 0.00 230182 230182 S1 527000 Bacillus pseudomycoides DSM 12442 0.02 2070519 1837547 S 1405 Bacillus mycoides 0.00 232206 232206 S1 315730 Bacillus mycoides KBAB4 0.00 766 766 S1 526997 Bacillus mycoides DSM 2048 0.02 1353639 1346723 S 580165 Bacillus cytotoxicus 0.00 6916 6916 S1 315749 Bacillus cytotoxicus NVH 391-98 0.01 746903 746903 S 2026191 Bacillus luti 0.01 701751 701751 S 1890302 Bacillus wiedmannii 0.01 587285 587285 S 2026189 Bacillus albus 0.01 463286 58578 G2 2750818 unclassified Bacillus cereus group 0.00 178592 178592 S 2217832 Bacillus sp. JAS24-2 0.00 104300 104300 S 1892404 Bacillus sp. ABP14 0.00 70238 70238 S 2053832 Bacillus sp. HBCD-sjtu 0.00 51450 51450 S 1839798 Bacillus sp. FDAARGOS_235 0.00 105 105 S 2217825 Bacillus sp. AR4-2 0.00 23 23 S 2217830 Bacillus sp. SH8-8 0.00 422540 414200 S 1392 Bacillus anthracis 0.00 2667 2667 S1 768494 Bacillus anthracis str. H9401 0.00 955 955 S1 568206 Bacillus anthracis str. CDC 684 0.00 913 913 S1 673518 Bacillus anthracis str. A16R 0.00 761 761 S1 1452727 Bacillus anthracis str. Turkey32 0.00 470 470 S1 260799 Bacillus anthracis str. Sterne 0.00 445 445 S1 743835 Bacillus anthracis str. A16 0.00 373 373 S1 1392837 Bacillus anthracis str. SVA11 0.00 338 338 S1 261591 Bacillus anthracis str. Vollum 0.00 305 305 S1 1449979 Bacillus anthracis str. V770-NP-1R 0.00 278 278 S1 1412842 Bacillus anthracis 9080-G 0.00 234 234 S1 1412843 Bacillus anthracis 8903-G 0.00 230 230 S1 1412844 Bacillus anthracis 52-G 0.00 194 194 S1 198094 Bacillus anthracis str. Ames 0.00 177 177 S1 1213182 Bacillus anthracis str. BF1 0.00 197551 197551 S 2026186 Bacillus paranthracis 0.00 96338 96338 S 2026190 Bacillus mobilis 0.00 75956 48340 S 658666 Bacillus bombysepticus 0.00 27616 27616 S1 1330043 Bacillus bombysepticus str. Wang 0.00 75820 75820 S 2026188 Bacillus tropicus 0.00 63228 63228 S 2026187 Bacillus pacificus 0.00 22544 0 S 155322 Bacillus toyonensis 0.00 22544 22544 S1 1415784 Bacillus toyonensis BCT-7112 0.29 26536299 592085 G1 185979 unclassified Bacillus 0.02 1697763 1697763 S 486398 Bacillus sp. S3 0.02 1626669 1626669 S 2567941 Bacillus sp. DSL-17 0.02 1622526 1622526 S 1705566 Bacillus sp. FJAT-18017 0.02 1519553 1519553 S 352858 Bacillus sp. Y1 0.02 1406892 1406892 S 666686 Bacillus sp. 1NLA3E 0.02 1355825 1355825 S 2011012 Bacillus sp. FJAT-45348 0.01 1284482 1284482 S 2014076 Bacillus sp. FJAT-42376 0.01 1280540 1280540 S 2709784 Bacillus sp. KH172YL63 0.01 1245529 1245529 S 1071078 Bacillus sp. NSP9.1 0.01 1232831 1232831 S 1581038 Bacillus sp. FJAT-22090 0.01 1223585 1223585 S 2587848 Bacillus sp. THAF10 0.01 1215754 1215754 S 2592382 Bacillus sp. M4U3P1 0.01 1169096 1169096 S 2760090 Bacillus sp. PAMC26568 0.01 1163395 1163395 S 1071080 Bacillus sp. SB49 0.01 1096234 1096234 S 98228 Bacillus sp. OxB-1 0.01 1023357 1023357 S 2682541 Bacillus sp. N1-1 0.01 962819 962819 S 2589818 Bacillus sp. Cs-700 0.01 962740 962740 S 1565991 Bacillus sp. X1(2014) 0.01 961385 961385 S 2728853 Bacillus sp. L13 (2020) 0.00 306283 306283 S 2666127 Bacillus sp. N3536 0.00 279580 279580 S 2499213 Bacillus sp. BD59S 0.00 270231 270231 S 756828 Bacillus sp. WP8 0.00 217239 217239 S 2529386 Bacillus sp. SYJ 0.00 138622 138622 S 2762329 Bacillus sp. PAMC26543 0.00 109540 109540 S 2009331 Bacillus sp. MD-5 0.00 108234 108234 S 1127744 Bacillus sp. JS 0.00 93656 93656 S 2683680 Bacillus sp. ms-22 0.00 71040 71040 S 2608254 Bacillus sp. BS98 0.00 40977 40977 S 1806216 Bacillus sp. RZ2MS9 0.00 40734 40734 S 2660750 Bacillus sp. A260 0.00 35313 35313 S 2665175 Bacillus sp. AM1(2019) 0.00 33159 33159 S 2576356 Bacillus sp. FDAARGOS_527 0.00 27760 27760 S 2080759 Bacillus sp. DU-106 0.00 25041 25041 S 1827146 Bacillus sp. IHB B 7164 0.00 21414 21414 S 2052936 Bacillus sp. Y-01 0.00 17485 17485 S 1774743 Bacillus sp. SDLI1 0.00 10382 10382 S 2093834 Bacillus sp. ZY-1-1 0.00 8465 8465 S 1446792 Bacillus sp. Pc3 0.00 5614 5614 S 2448811 Bacillus sp. WR11 0.00 5424 5424 S 2762328 Bacillus sp. PAMC28748 0.00 5177 5177 S 563169 Bacillus sp. SJ-10 0.00 4995 4995 S 2267265 Bacillus sp. DM2 0.00 4296 4296 S 1941347 Bacillus sp. 275 0.00 3292 3292 S 1574141 Bacillus sp. YP1 0.00 1541 1541 S 887059 Bacillus sp. BS-02 0.00 1191 1191 S 1856406 Bacillus sp. H15-1 0.00 1131 1131 S 253629 Bacillus sp. JAMB750 0.00 994 994 S 2585772 Bacillus sp. HNA3 0.00 961 961 S 1476571 Bacillus sp. #24 0.00 853 853 S 119423 Bacillus sp. B-3 0.00 481 481 S 1570330 Bacillus sp. BH072 0.00 388 388 S 2049935 Bacillus sp. Lzh-5 0.00 379 379 S 745376 Bacillus sp. BS-01 0.00 316 316 S 1837130 Bacillus sp. FJAT-14266 0.00 290 290 S 1628753 Bacillus sp. LM 4-2 0.00 223 223 S 2026248 Bacillus sp. 1s-1 0.00 220 220 S 2762327 Bacillus sp. PAMC28571 0.00 171 171 S 1409 Bacillus sp. (in: Bacteria) 0.00 108 108 S 2762326 Bacillus sp. PAMC22265 0.00 18 18 S 2582827 Bacillus sp. KBS0812 0.00 11 11 S 886284 Bacillus sp. 24 0.00 10 10 S 2709781 Bacillus sp. LUNF1 0.21 18787845 1260229 G1 653685 Bacillus subtilis group 0.06 5025703 4374567 S 1423 Bacillus subtilis 0.00 341787 187476 S1 135461 Bacillus subtilis subsp. subtilis 0.00 136663 136663 S2 1052588 Bacillus subtilis subsp. subtilis str. RO-NN-1 0.00 5009 5009 S2 224308 Bacillus subtilis subsp. subtilis str. 168 0.00 4139 4139 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 0.00 3217 3217 S2 1192196 Bacillus subtilis subsp. subtilis str. BSP1 0.00 3154 3154 S2 1404258 Bacillus subtilis subsp. subtilis str. OH 131.1 0.00 857 857 S2 535024 Bacillus subtilis subsp. subtilis str. SMY 0.00 801 693 S2 535026 Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 0.00 108 108 S3 1147161 Bacillus subtilis subsp. subtilis 6051-HGW 0.00 440 440 S2 535025 Bacillus subtilis subsp. subtilis str. JH642 0.00 31 31 S2 1221328 Bacillus subtilis subsp. subtilis str. AG1839 0.00 160656 160656 S1 483913 Bacillus subtilis subsp. inaquosorum 0.00 132482 0 S1 96241 Bacillus subtilis subsp. spizizenii 0.00 131992 131992 S2 1052585 Bacillus subtilis subsp. spizizenii TU-B-10 0.00 490 490 S2 655816 Bacillus subtilis subsp. spizizenii str. W23 0.00 9694 9694 S1 1233100 Bacillus subtilis XF-1 0.00 3588 3588 S1 936156 Bacillus subtilis BSn5 0.00 1553 1543 S1 86029 Bacillus subtilis subsp. natto 0.00 10 10 S2 645657 Bacillus subtilis subsp. natto BEST195 0.00 446 446 S1 1220533 Bacillus subtilis QB928 0.00 371 371 S1 1204342 Bacillus subtilis BEST7003 0.00 279 279 S1 1453990 Bacillus subtilis HJ5 0.00 218 218 S1 1415167 Bacillus subtilis PY79 0.00 36 36 S1 1340494 Bacillus subtilis TO-A 0.00 26 26 S1 1136873 Bacillus subtilis KCTC 1028 = ATCC 6051a 0.05 4691947 983007 G2 1938374 Bacillus amyloliquefaciens group 0.02 2203124 2121420 S 492670 Bacillus velezensis 0.00 15596 15596 S1 1225788 Bacillus velezensis AS43.3 0.00 14196 14196 S1 1114958 Bacillus velezensis CAU B946 0.00 14086 14086 S1 1449088 Bacillus velezensis TrigoCor1448 0.00 11523 11523 S1 1385727 Bacillus velezensis NAU-B3 0.00 10910 10910 S1 1338518 Bacillus velezensis UCMB5033 0.00 7401 7401 S1 1458206 Bacillus velezensis NJN-6 0.00 6961 6961 S1 1423138 Bacillus velezensis SQR9 0.00 496 496 S1 1150476 Bacillus velezensis UCMB5113 0.00 364 364 S1 1150475 Bacillus velezensis UCMB5036 0.00 106 106 S1 326423 Bacillus velezensis FZB42 0.00 65 65 S1 1155777 Bacillus velezensis YAU B9601-Y2 0.02 1491135 1448996 S 1390 Bacillus amyloliquefaciens 0.00 12223 12223 S1 1001582 Bacillus amyloliquefaciens LL3 0.00 11594 11594 S1 1333538 Bacillus amyloliquefaciens UMAF6639 0.00 10602 10602 S1 1292358 Bacillus amyloliquefaciens KHG19 0.00 3924 3924 S1 1434324 Bacillus amyloliquefaciens UMAF6614 0.00 1477 1477 S1 1415165 Bacillus amyloliquefaciens LFB112 0.00 939 939 S1 1034836 Bacillus amyloliquefaciens XH7 0.00 670 670 S1 692420 Bacillus amyloliquefaciens DSM 7 = ATCC 23350 0.00 343 343 S1 999891 Bacillus amyloliquefaciens TA208 0.00 246 246 S1 1126211 Bacillus amyloliquefaciens Y2 0.00 105 105 S1 1091041 Bacillus amyloliquefaciens IT-45 0.00 16 16 S1 1412898 Bacillus amyloliquefaciens CC178 0.00 14681 14681 S 659243 Bacillus siamensis 0.02 2044935 1892175 S 1452 Bacillus atrophaeus 0.00 152296 152296 S1 1239783 Bacillus atrophaeus UCMB-5137 0.00 258 258 S1 1529886 Bacillus atrophaeus subsp. globigii 0.00 206 206 S1 720555 Bacillus atrophaeus 1942 0.02 1612984 1611548 S 1648923 Bacillus paralicheniformis 0.00 1436 1436 S1 766760 Bacillus paralicheniformis ATCC 9945a 0.01 1222830 1222830 S 119858 Bacillus sonorensis 0.01 936109 936109 S 72361 Bacillus vallismortis 0.01 696313 696313 S 227866 Bacillus tequilensis 0.01 695791 14975 G2 653388 Bacillus mojavensis subgroup 0.01 558567 558567 S 72360 Bacillus mojavensis 0.00 122249 122249 S 260554 Bacillus halotolerans 0.01 601004 590494 S 1402 Bacillus licheniformis 0.00 10299 10299 S1 1126218 Bacillus licheniformis WX-02 0.00 211 211 S1 279010 Bacillus licheniformis DSM 13 = ATCC 14580 0.07 6455713 5031547 S 1404 Bacillus megaterium 0.00 428423 428423 S1 1006007 Bacillus megaterium WSH-002 0.00 262109 262109 S1 1138452 Bacillus megaterium NCT-2 0.00 235164 235164 S1 1348623 Bacillus megaterium NBRC 15308 = ATCC 14581 0.00 210771 210771 S1 592022 Bacillus megaterium DSM 319 0.00 193668 193668 S1 1452722 Bacillus megaterium Q3 0.00 94031 94031 S1 545693 Bacillus megaterium QM B1551 0.04 3668346 3586734 S 1408 Bacillus pumilus 0.00 81612 81612 S1 315750 Bacillus pumilus SAFR-032 0.03 2949630 2949630 S 1397 Bacillus circulans 0.03 2787267 2787267 S 189381 Bacillus marisflavi 0.03 2445634 2240048 S 1398 Bacillus coagulans 0.00 137611 137611 S1 941639 Bacillus coagulans 2-6 0.00 67975 67975 S1 345219 Bacillus coagulans 36D1 0.02 1966378 1966378 S 1664069 Bacillus glycinifermentans 0.02 1582218 1582218 S 1402861 Bacillus filamentosus 0.02 1533408 1533408 S 1670641 Bacillus ciccensis 0.02 1496574 0 S 324767 Bacillus infantis 0.02 1496574 1496574 S1 1367477 Bacillus infantis NRRL B-14911 0.02 1444194 1444194 S 33932 Bacillus cohnii 0.02 1433917 1433917 S 1742359 Bacillus dafuensis 0.02 1393204 0 S 1413 Bacillus cellulosilyticus 0.02 1393204 1393204 S1 649639 Bacillus cellulosilyticus DSM 2522 0.02 1382327 1382327 S 218284 Bacillus vietnamensis 0.02 1374791 1374791 S 1441095 Bacillus gobiensis 0.02 1372739 1372739 S 86664 Bacillus flexus 0.01 1336363 1336363 S 1467 Bacillus lentus 0.01 1328569 1222487 S 561879 Bacillus safensis 0.00 106082 106082 S1 1178541 Bacillus safensis FO-36b 0.01 1318392 1318392 S 1783501 Bacillus freudenreichii 0.01 1292433 1292433 S 79883 Bacillus horikoshii 0.01 1286605 1286605 S 1547283 Bacillus weihaiensis 0.01 1184386 74888 G1 1792192 Bacillus altitudinis complex 0.01 1068475 1068475 S 293387 Bacillus altitudinis 0.00 41023 41023 S 293389 Bacillus aerophilus 0.01 1116392 1116392 S 35841 Bacillus thermoamylovorans 0.01 1097036 1097036 S 632773 Bacillus beveridgei 0.01 1080922 1080922 S 2598861 Bacillus miscanthi 0.01 986915 0 S 1471 Bacillus methanolicus 0.01 986915 986915 S1 796606 Bacillus methanolicus MGA3 0.01 941431 941431 S 1479 Bacillus smithii 0.01 662991 662991 S 450367 [Brevibacterium] frigoritolerans 0.01 511486 511486 S 1925021 Bacillus haynesii 0.00 105193 105193 S 1178537 Bacillus xiamenensis 0.00 61042 61042 S 412384 Bacillus aryabhattai 0.00 1137 1137 S 1963032 Bacillus intestinalis 0.00 750 750 S 1178540 Bacillus zhangzhouensis 0.00 419 419 S 79881 Bacillus gibsonii 0.00 42 42 S 1400 Bacillus intermedius 0.12 11078806 735104 G 84406 Virgibacillus 0.06 5559640 7844 G1 2620237 unclassified Virgibacillus 0.02 1409416 1409416 S 1911587 Virgibacillus sp. 6R 0.02 1354979 1354979 S 2419842 Virgibacillus sp. Bac332 0.01 1021791 1021791 S 2700081 Virgibacillus sp. MSP4-1 0.01 930845 930845 S 403957 Virgibacillus sp. SK37 0.01 834765 834765 S 2419841 Virgibacillus sp. Bac330 0.02 1444406 1444406 S 1482 Virgibacillus halodenitrificans 0.01 1312555 1312555 S 163877 Virgibacillus necropolis 0.01 1236926 1236926 S 2017483 Virgibacillus phasianinus 0.01 790175 790175 S 302167 Virgibacillus dokdonensis 0.11 9800152 1914204 G 400634 Lysinibacillus 0.04 3625172 1423 G1 2636778 unclassified Lysinibacillus 0.01 1308192 1308192 S 2072025 Lysinibacillus sp. YS11 0.01 1230745 1230745 S 2070463 Lysinibacillus sp. SGAir0095 0.01 1084812 1084812 S 2169540 Lysinibacillus sp. 2017 0.02 2060723 2051409 S 1421 Lysinibacillus sphaericus 0.00 9314 9314 S1 444177 Lysinibacillus sphaericus C3-41 0.01 1239681 1239681 S 2086577 Lysinibacillus timonensis 0.01 638828 638828 S 28031 Lysinibacillus fusiformis 0.00 321544 321544 S 1145276 Lysinibacillus varians 0.10 8685912 2107560 G 129337 Geobacillus 0.02 1714050 1714050 S 129338 Geobacillus subterraneus 0.01 1197699 1125082 S 33940 Geobacillus thermodenitrificans 0.00 72617 72617 S1 420246 Geobacillus thermodenitrificans NG80-2 0.01 1165982 273651 G1 2642459 unclassified Geobacillus 0.00 199878 199878 S 391290 Geobacillus sp. E263 0.00 197547 197547 S 471223 Geobacillus sp. WCH70 0.00 193058 193058 S 1813182 Geobacillus sp. JS12 0.00 108507 108507 S 691437 Geobacillus sp. C56-T3 0.00 99160 99160 S 1233873 Geobacillus sp. GHH01 0.00 92308 92308 S 581103 Geobacillus sp. Y4.1MC1 0.00 996 996 S 1267277 Geobacillus sp. 610 0.00 445 445 S 1273699 Geobacillus sp. 1121 0.00 298 298 S 544556 Geobacillus sp. Y412MC61 0.00 134 134 S 550542 Geobacillus sp. Y412MC52 0.01 1040397 227702 G1 1505648 Geobacillus thermoleovorans group 0.00 390988 390988 S 33938 Geobacillus thermocatenulatus 0.00 217181 216437 S 33941 Geobacillus thermoleovorans 0.00 744 744 S1 1111068 Geobacillus thermoleovorans CCB_US3_UF5 0.00 150067 7611 S 1462 Geobacillus kaustophilus 0.00 84955 84955 S1 1220595 Geobacillus kaustophilus NBRC 102445 0.00 57501 57501 S1 235909 Geobacillus kaustophilus HTA426 0.00 54459 54459 S 1394 [Bacillus] caldolyticus 0.01 805719 805719 S 1921421 Geobacillus genomosp. 3 0.01 654505 568062 S 1422 Geobacillus stearothermophilus 0.00 86443 86443 S1 272567 Geobacillus stearothermophilus 10 0.08 7664946 4776 G 2675234 Alkalihalobacillus 0.03 2400799 2228677 S 79880 Alkalihalobacillus clausii 0.00 172122 172122 S1 66692 Bacillus clausii KSM-K16 0.02 1558704 1289351 S 86665 Alkalihalobacillus halodurans 0.00 269353 269353 S1 272558 Bacillus halodurans C-125 0.02 1388277 1388277 S 199441 Alkalihalobacillus krulwichiae 0.01 1294028 0 S 79885 Alkalihalobacillus pseudofirmus 0.01 1294028 1294028 S1 398511 Bacillus pseudofirmus OF4 0.01 1018362 0 S 300825 Alkalihalobacillus lehensis 0.01 1018362 1018362 S1 1246626 Bacillus lehensis G1 0.08 6864888 101154 G 2675229 Peribacillus 0.03 2403171 1309474 S 1478 Peribacillus simplex 0.01 1093697 1093697 S1 1349754 Peribacillus simplex NBRC 15720 = DSM 1321 0.02 1501985 1501985 S 421767 Peribacillus butanolivorans 0.02 1435928 1435928 S 264697 Peribacillus muralis 0.02 1422650 1422650 S 228899 Peribacillus asahii 0.05 4605095 96270 G 182709 Oceanobacillus 0.02 2184900 1178027 S 182710 Oceanobacillus iheyensis 0.01 1006873 1006873 S1 221109 Oceanobacillus iheyensis HTE831 0.01 1247963 0 G1 2630292 unclassified Oceanobacillus 0.01 1247963 1247963 S 2052660 Oceanobacillus sp. 160 0.01 1075962 0 S 746691 Oceanobacillus kimchii 0.01 1075962 1075962 S1 1238184 Oceanobacillus kimchii X50 0.05 4147678 641445 G 150247 Anoxybacillus 0.02 1450474 1104443 G1 2639704 unclassified Anoxybacillus 0.00 328850 328850 S 1636720 Anoxybacillus sp. PDR2 0.00 17125 17125 S 1490057 Anoxybacillus sp. B7M1 0.00 56 56 S 1490052 Anoxybacillus sp. B2M1 0.01 869990 869990 S 294699 Anoxybacillus amylolyticus 0.01 860639 408345 S 33934 Anoxybacillus flavithermus 0.01 452294 452294 S1 491915 Anoxybacillus flavithermus WK1 0.00 180277 0 S 196180 Anoxybacillus kamchatkensis 0.00 180277 180277 S1 1212546 Anoxybacillus kamchatkensis G10 0.00 144853 144853 S 198467 Anoxybacillus gonensis 0.04 3848352 7366 G 45667 Halobacillus 0.01 1311251 1311251 S 45668 Halobacillus litoralis 0.01 1276355 1276355 S 402384 Halobacillus mangrovi 0.01 1253380 1251982 S 1570 Halobacillus halophilus 0.00 1398 1398 S1 866895 Halobacillus halophilus DSM 2266 0.04 3265037 959 G 2675231 Mesobacillus 0.02 1828681 1828681 S 279826 Mesobacillus foraminis 0.02 1435397 1435397 S 129985 Mesobacillus jeotgali 0.04 3245077 4511 G 2675233 Metabacillus 0.02 1695796 0 G1 2675274 unclassified Metabacillus 0.02 1695796 1695796 S 2745198 Metabacillus sp. KUDC1714 0.02 1544770 1544770 S 152268 Metabacillus litoralis 0.04 3164201 483 G 2675230 Cytobacillus 0.02 1756201 0 S 665099 Cytobacillus oceanisediminis 0.02 1756201 1756201 S1 1196031 Bacillus oceanisediminis 2691 0.02 1407517 1407517 S 859143 Cytobacillus kochii 0.03 2502875 17524 G 1329200 Fictibacillus 0.01 1279066 1279066 S 1221500 Fictibacillus phosphorivorans 0.01 1206285 1206285 S 255247 Fictibacillus arsenicus 0.03 2404306 16665 G 175304 Lentibacillus 0.01 1229160 0 G1 2614679 unclassified Lentibacillus 0.01 1229160 1229160 S 2518176 Lentibacillus sp. CBA3610 0.01 1158481 1158481 S 1472767 Lentibacillus amyloliquefaciens 0.02 2194651 38685 G 2685905 Salicibibacter 0.01 1086621 1086621 S 2099786 Salicibibacter kimchii 0.01 1069345 1069345 S 2502791 Salicibibacter halophilus 0.02 2088433 20 G 2675232 Neobacillus 0.02 1758169 1758169 S 1193713 Neobacillus mesonae 0.00 330244 330244 S 1215031 Neobacillus thermocopriae 0.02 1670979 16359 G 1906945 Parageobacillus 0.01 977495 977495 S 1295642 Parageobacillus genomosp. 1 0.00 434698 228776 S 1426 Parageobacillus thermoglucosidasius 0.00 121895 121895 S1 634956 Parageobacillus thermoglucosidasius C56-YS93 0.00 84027 84027 S1 1136178 Parageobacillus thermoglucosidasius TNO-09.020 0.00 242427 0 S 153151 Parageobacillus toebii 0.00 242427 242427 S1 1223503 Parageobacillus toebii NBRC 107807 0.02 1574059 592 G 1221880 Psychrobacillus 0.01 1251668 1251668 S 2283160 Psychrobacillus glaciei 0.00 321799 0 G1 2636677 unclassified Psychrobacillus 0.00 321799 321799 S 2303505 Psychrobacillus sp. AK 1817 0.02 1550586 0 G 74385 Gracilibacillus 0.02 1550586 0 G1 2625209 unclassified Gracilibacillus 0.02 1550586 1550586 S 2663022 Gracilibacillus sp. SCU50 0.01 1213231 0 G 289201 Pontibacillus 0.01 1213231 0 G1 2628296 unclassified Pontibacillus 0.01 1213231 1213231 S 2692425 Pontibacillus sp. HMF3514 0.01 1195653 0 G 2651279 Pradoshia 0.01 1195653 0 G1 2651280 unclassified Pradoshia 0.01 1195653 1195653 S 2651284 Pradoshia sp. D12 0.01 1130631 4464 F1 197483 unclassified Bacillaceae 0.01 1103554 1103554 S 2594883 Bacillaceae bacterium TKL69 0.00 12155 12155 S 1028381 Bacillaceae bacterium JMAK1 0.00 8087 8087 S 2654326 Bacillaceae bacterium C05 0.00 2371 2371 S 2654284 Bacillaceae bacterium C02 0.01 1113605 0 G 200903 Paraliobacillus 0.01 1113605 0 G1 2627918 unclassified Paraliobacillus 0.01 1113605 1113605 S 2213194 Paraliobacillus sp. X-1125 0.01 1109128 0 G 459532 Terribacillus 0.01 1109128 1109128 S 386490 Terribacillus goriensis 0.01 1055562 0 G 1055323 Aeribacillus 0.01 1055562 1055562 S 33936 Aeribacillus pallidus 0.01 844201 0 G 351195 Salimicrobium 0.01 844201 844201 S 1230341 Salimicrobium jeotgali 0.01 760033 0 G 29331 Amphibacillus 0.01 760033 0 S 1449 Amphibacillus xylanus 0.01 760033 760033 S1 698758 Amphibacillus xylanus NBRC 15112 0.00 1083 0 G 1370 Marinococcus 0.00 1083 1083 S 1371 Marinococcus halophilus 1.88 169354022 193878 F 186822 Paenibacillaceae 1.52 136862826 10462588 G 44249 Paenibacillus 0.52 46575737 1548905 G1 185978 unclassified Paenibacillus 0.03 2659496 2659496 S 2762320 Paenibacillus sp. PAMC21692 0.02 2249374 2249374 S 2704463 Paenibacillus sp. 14171R-81 0.02 2247438 2247438 S 1536774 Paenibacillus sp. FSL H7-0357 0.02 2237868 2237868 S 1870819 Paenibacillus sp. BIHB4019 0.02 2222429 2222429 S 324057 Paenibacillus sp. JDR-2 0.02 2190699 2190699 S 2748863 Paenibacillus sp. E222 0.02 2016366 2016366 S 2211212 Paenibacillus sp. DCT19 0.02 1998441 1998441 S 2704462 Paenibacillus sp. 12200R-189 0.02 1952654 1952654 S 1536772 Paenibacillus sp. FSL R7-0273 0.02 1844206 1844206 S 1536773 Paenibacillus sp. FSL R7-0331 0.02 1735566 1735566 S 1566358 Paenibacillus sp. IHBB 10380 0.02 1676483 1676483 S 2023772 Paenibacillus sp. RUD330 0.02 1635240 1635240 S 1695218 Paenibacillus sp. 32O-W 0.02 1629354 1629354 S 2607911 Paenibacillus sp. 37 0.02 1606213 1606213 S 1536770 Paenibacillus sp. FSL R5-0345 0.02 1578196 1578196 S 1536775 Paenibacillus sp. FSL H7-0737 0.02 1571929 1571929 S 1536769 Paenibacillus sp. FSL P4-0081 0.02 1495701 1495701 S 1532905 Paenibacillus sp. CAA11 0.02 1484083 1484083 S 2660554 Paenibacillus sp. B01 0.02 1481630 1481630 S 1536771 Paenibacillus sp. FSL R5-0912 0.02 1472934 1472934 S 2741301 Paenibacillus sp. URB8-2 0.02 1363915 1363915 S 2565926 Paenibacillus sp. HB172198 0.01 1331647 1331647 S 481743 Paenibacillus sp. Y412MC10 0.01 1308710 1308710 S 2726185 Paenibacillus sp. UniB2 0.01 1218374 1218374 S 867076 Paenibacillus sp. IHB B 3084 0.01 464558 464558 S 1980674 Paenibacillus sp. Cedars 0.00 190148 190148 S 2487928 Paenibacillus sp. M-152 0.00 163180 163180 S 2069255 Paenibacillus sp. lzh-N1 0.07 6071139 5004736 S 1406 Paenibacillus polymyxa 0.01 502038 502038 S1 349520 Paenibacillus polymyxa E681 0.00 182272 182272 S1 1429244 Paenibacillus polymyxa CR1 0.00 168022 168022 S1 886882 Paenibacillus polymyxa SC2 0.00 148495 148495 S1 1052684 Paenibacillus polymyxa M1 0.00 65576 65576 S1 1413214 Paenibacillus polymyxa SQR-21 0.04 3664924 2560190 S 61624 Paenibacillus mucilaginosus 0.01 460951 460951 S1 997761 Paenibacillus mucilaginosus K02 0.00 379940 379940 S1 1036673 Paenibacillus mucilaginosus KNP414 0.00 263843 263843 S1 1116391 Paenibacillus mucilaginosus 3016 0.03 3018854 1696841 S 44251 Paenibacillus durus 0.01 1322013 1322013 S1 1333534 Paenibacillus durus ATCC 35681 0.03 2830117 2830117 S 189426 Paenibacillus odorifer 0.03 2528242 2528242 S 1778678 Paenibacillus psychroresistens 0.03 2525022 2525022 S 414771 Paenibacillus donghaensis 0.03 2292219 2292219 S 562959 Paenibacillus cellulositrophicus 0.02 2229604 2229604 S 1712516 Paenibacillus baekrokdamisoli 0.02 2176025 2176025 S 375489 Paenibacillus cellulosilyticus 0.02 2150316 2150316 S 1473112 Paenibacillus guangzhouensis 0.02 2054597 2054597 S 44250 Paenibacillus alvei 0.02 2054105 2054105 S 2495582 Paenibacillus albus 0.02 2010176 2010176 S 49283 Paenibacillus thiaminolyticus 0.02 1998419 1998419 S 2707005 Paenibacillus lutimineralis 0.02 1996875 1996875 S 1870820 Paenibacillus ihbetae 0.02 1991676 1991676 S 79263 Paenibacillus chitinolyticus 0.02 1934316 1440807 S 1464 Paenibacillus larvae 0.00 300308 260125 S1 147375 Paenibacillus larvae subsp. larvae 0.00 40183 40183 S2 697284 Paenibacillus larvae subsp. larvae DSM 25430 0.00 193201 193201 S1 1477 Paenibacillus larvae subsp. pulvifaciens 0.02 1926251 1926251 S 248903 Paenibacillus xylanilyticus 0.02 1909644 1909644 S 198119 Paenibacillus barcinonensis 0.02 1909233 1909233 S 160799 Paenibacillus borealis 0.02 1746121 1746121 S 1126833 Paenibacillus beijingensis 0.02 1720767 0 G1 2044880 Paenibacillus sonchi group 0.02 1720767 0 S 483937 Paenibacillus riograndensis 0.02 1720767 1720767 S1 1073571 Paenibacillus riograndensis SBR5 0.02 1710354 1710354 S 1616788 Paenibacillus bovis 0.02 1688664 1688664 S 169760 Paenibacillus stellifer 0.02 1687528 1687528 S 172713 Paenibacillus kribbensis 0.02 1661315 1661315 S 253703 Paenibacillus antarcticus 0.02 1606499 1606499 S 162209 Paenibacillus naphthalenovorans 0.02 1590914 1590914 S 1338368 Paenibacillus lentus 0.02 1573828 1573828 S 1178515 Paenibacillus swuensis 0.02 1506155 1506155 S 189425 Paenibacillus graminis 0.02 1453301 1453301 S 528191 Paenibacillus xylanexedens 0.02 1443828 1443828 S 1763538 Paenibacillus crassostreae 0.02 1395228 0 S 365617 Paenibacillus sabinae 0.02 1395228 1395228 S1 1268072 Paenibacillus sabinae T27 0.02 1394412 1394412 S 682956 Paenibacillus jilunlii 0.01 1345429 1345429 S 1401 Paenibacillus lautus 0.01 1292961 1292961 S 1462996 Paenibacillus yonginensis 0.01 1289151 1289151 S 2509456 Paenibacillus protaetiae 0.01 1284051 0 S 159743 Paenibacillus terrae 0.01 1284051 1284051 S1 985665 Paenibacillus terrae HPL-003 0.01 1276110 1276110 S 1619311 Paenibacillus physcomitrellae 0.01 1253131 1253131 S 128574 Paenibacillus brasilensis 0.00 449671 449671 S 59843 Paenibacillus glucanolyticus 0.00 177063 177063 S 59893 Paenibacillus peoriae 0.00 6266 2037 S 78057 Paenibacillus popilliae 0.00 4229 4229 S1 1212764 Paenibacillus popilliae ATCC 14706 0.19 16880045 2389034 G 55080 Brevibacillus 0.07 6130589 4066685 S 1393 Brevibacillus brevis 0.01 1112002 1112002 S1 358681 Brevibacillus brevis NBRC 100599 0.01 951902 951902 S1 1200792 Brevibacillus brevis X23 0.05 4276882 3751280 S 1465 Brevibacillus laterosporus 0.00 308605 308605 S1 1121121 Brevibacillus laterosporus DSM 25 0.00 216997 216997 S1 1042163 Brevibacillus laterosporus LMG 15441 0.02 1579657 1579657 S 51101 Brevibacillus agri 0.02 1504276 0 G1 2684853 unclassified Brevibacillus 0.01 1248309 1248309 S 2496837 Brevibacillus sp. SCSIO 07484 0.00 255967 255967 S 2683193 Brevibacillus sp. 7WMA2 0.01 999045 999045 S 54913 Brevibacillus formosus 0.00 562 562 S 45462 Brevibacillus borstelensis 0.09 8424045 13568 G 329857 Cohnella 0.05 4580372 24214 G1 2636738 unclassified Cohnella 0.03 2598875 2598875 S 2728023 Cohnella sp. MFER-1 0.02 1957283 1957283 S 2598458 Cohnella sp. KS 22 0.02 2189547 2189547 S 2507935 Cohnella abietis 0.02 1640558 1640558 S 2674991 Cohnella candidum 0.03 2341277 0 F1 85151 Aneurinibacillus group 0.03 2341277 1180 G 55079 Aneurinibacillus 0.01 1243011 1243011 S 1500254 Aneurinibacillus soli 0.01 1097086 0 G1 2642329 unclassified Aneurinibacillus 0.01 1097086 1097086 S 1450761 Aneurinibacillus sp. XH2 0.02 1694115 0 G 456492 Saccharibacillus 0.02 1694115 1694115 S 2583377 Saccharibacillus brassicae 0.02 1689954 0 F1 234447 unclassified Paenibacillaceae 0.02 1689954 1689954 S 1882832 Paenibacillaceae bacterium GAS479 0.01 1267882 0 G 76632 Thermobacillus 0.01 1267882 0 S 377615 Thermobacillus composti 0.01 1267882 1267882 S1 717605 Thermobacillus composti KWC4 0.54 48884785 68155 F 90964 Staphylococcaceae 0.49 43948032 5429027 G 1279 Staphylococcus 0.04 3885817 3672146 S 1280 Staphylococcus aureus 0.00 199115 72094 S1 46170 Staphylococcus aureus subsp. aureus 0.00 74911 74911 S2 869816 Staphylococcus aureus subsp. aureus JKD6159 0.00 24605 24605 S2 1381115 Staphylococcus aureus subsp. aureus Tager 104 0.00 4447 4447 S2 985006 Staphylococcus aureus subsp. aureus LGA251 0.00 2793 1955 S2 523796 Staphylococcus aureus subsp. aureus ST398 0.00 838 838 S3 1155084 Staphylococcus aureus subsp. aureus 71193 0.00 2740 2740 S2 1006543 Staphylococcus aureus subsp. aureus T0131 0.00 2059 2059 S2 1074919 Staphylococcus aureus subsp. aureus ST228 0.00 1538 1538 S2 685039 Staphylococcus aureus subsp. aureus ED133 0.00 1456 1456 S2 1392476 Staphylococcus aureus subsp. aureus 6850 0.00 1388 1388 S2 585143 Staphylococcus aureus subsp. aureus 55/2053 0.00 1358 1358 S2 548473 Staphylococcus aureus subsp. aureus TCH60 0.00 1206 1206 S2 1406863 Staphylococcus aureus subsp. aureus Z172 0.00 1155 1155 S2 548470 Staphylococcus aureus subsp. aureus MN8 0.00 1121 1121 S2 889933 Staphylococcus aureus subsp. aureus ECT-R 2 0.00 915 915 S2 1368166 Staphylococcus aureus subsp. aureus SA268 0.00 732 732 S2 1343064 Staphylococcus aureus subsp. aureus ST772-MRSA-V 0.00 606 606 S2 663951 Staphylococcus aureus subsp. aureus TW20 0.00 464 464 S2 1028799 Staphylococcus aureus subsp. aureus VC40 0.00 451 451 S2 1123523 Staphylococcus aureus subsp. aureus 11819-97 0.00 431 431 S2 681288 Staphylococcus aureus subsp. aureus ED98 0.00 417 384 S2 93061 Staphylococcus aureus subsp. aureus NCTC 8325 0.00 33 33 S3 561307 Staphylococcus aureus subsp. aureus RN4220 0.00 314 0 S2 1196216 Staphylococcus aureus subsp. aureus ST72 0.00 314 314 S3 1193576 Staphylococcus aureus subsp. aureus CN1 0.00 291 291 S2 158878 Staphylococcus aureus subsp. aureus Mu50 0.00 247 247 S2 282458 Staphylococcus aureus subsp. aureus MRSA252 0.00 233 233 S2 1201010 Staphylococcus aureus subsp. aureus SA957 0.00 208 208 S2 93062 Staphylococcus aureus subsp. aureus COL 0.00 188 188 S2 1118959 Staphylococcus aureus subsp. aureus M013 0.00 179 7 S2 367830 Staphylococcus aureus subsp. aureus USA300 0.00 159 159 S3 451516 Staphylococcus aureus subsp. aureus USA300_TCH1516 0.00 13 13 S3 450394 Staphylococcus aureus subsp. aureus USA300_TCH959 0.00 149 149 S2 546342 Staphylococcus aureus subsp. aureus str. JKD6008 0.00 114 114 S2 418127 Staphylococcus aureus subsp. aureus Mu3 0.00 80 80 S2 1194085 Staphylococcus aureus subsp. aureus SA40 0.00 62 62 S2 1241616 Staphylococcus aureus subsp. aureus DSM 20231 0.00 44 44 S2 158879 Staphylococcus aureus subsp. aureus N315 0.00 40 40 S2 359786 Staphylococcus aureus subsp. aureus JH9 0.00 25 25 S2 282459 Staphylococcus aureus subsp. aureus MSSA476 0.00 24 24 S2 426430 Staphylococcus aureus subsp. aureus str. Newman 0.00 21 21 S2 359787 Staphylococcus aureus subsp. aureus JH1 0.00 9 9 S2 1074252 Staphylococcus aureus subsp. aureus HO 5096 0412 0.00 5148 5148 S1 948563 Staphylococcus aureus O46 0.00 4123 4123 S1 273036 Staphylococcus aureus RF122 0.00 2099 2099 S1 1323661 Staphylococcus aureus CA-347 0.00 1308 1308 S1 1229492 Staphylococcus aureus 08BA02176 0.00 912 912 S1 1305598 Staphylococcus aureus M1 0.00 756 756 S1 1458279 Staphylococcus aureus USA300-ISMMS1 0.00 173 173 S1 703339 Staphylococcus aureus 04-02981 0.00 20 20 S1 1147034 Staphylococcus aureus PM1 0.00 17 17 S1 903521 Staphylococcus aureus SK6575 0.02 2109230 2085987 S 1282 Staphylococcus epidermidis 0.00 14421 14421 S1 1449752 Staphylococcus epidermidis PM221 0.00 8793 8793 S1 176280 Staphylococcus epidermidis ATCC 12228 0.00 29 29 S1 176279 Staphylococcus epidermidis RP62A 0.02 1832753 439 G1 91994 unclassified Staphylococcus 0.01 607107 607107 S 1912064 Staphylococcus sp. MI 10-1553 0.01 575176 575176 S 2583989 Staphylococcus sp. 17KM0847 0.01 523293 523293 S 2044912 Staphylococcus sp. SDB 2975 0.00 80960 80960 S 2025492 Staphylococcus sp. M0911 0.00 23196 23196 S 1715860 Staphylococcus sp. AntiMn-1 0.00 18471 18471 S 678601 Staphylococcus sp. CDC3 0.00 3718 3718 S 373067 Staphylococcus sp. 693-2 0.00 393 393 S 678600 Staphylococcus sp. CDC25 0.02 1400808 1400808 S 1288 Staphylococcus xylosus 0.02 1357070 1357070 S 29382 Staphylococcus cohnii 0.01 1323216 1242946 S 1290 Staphylococcus hominis 0.00 80270 80270 S1 145391 Staphylococcus hominis subsp. hominis 0.01 1168265 1136777 S 283734 Staphylococcus pseudintermedius 0.00 19856 19856 S1 937773 Staphylococcus pseudintermedius HKU10-03 0.00 5931 5931 S1 1266717 Staphylococcus pseudintermedius E140 0.00 5701 5701 S1 984892 Staphylococcus pseudintermedius ED99 0.01 1166305 1133960 S 29385 Staphylococcus saprophyticus 0.00 32345 27496 S1 147452 Staphylococcus saprophyticus subsp. saprophyticus 0.00 4654 4654 S2 881952 Staphylococcus saprophyticus subsp. saprophyticus MS1146 0.00 195 195 S2 342451 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 0.01 1164764 1069111 S 29388 Staphylococcus capitis 0.00 95653 95653 S1 72758 Staphylococcus capitis subsp. capitis 0.01 1160454 1143780 S 1286 Staphylococcus simulans 0.00 16674 16674 S1 1287 Staphylococcus simulans bv. staphylolyticus 0.01 1135136 1073529 S 1296 Staphylococcus sciuri 0.00 61607 61607 S1 147467 Staphylococcus sciuri subsp. sciuri 0.01 1055008 1048986 S 28035 Staphylococcus lugdunensis 0.00 4758 4758 S1 698737 Staphylococcus lugdunensis HKU09-01 0.00 1264 1264 S1 1034809 Staphylococcus lugdunensis N920143 0.01 1053176 1013371 S 1283 Staphylococcus haemolyticus 0.00 39805 39805 S1 279808 Staphylococcus haemolyticus JCSC1435 0.01 871989 871989 S 214473 Staphylococcus nepalensis 0.01 834155 812856 S 45972 Staphylococcus pasteuri 0.00 21299 21299 S1 1276282 Staphylococcus pasteuri SP1 0.01 812220 812220 S 29380 Staphylococcus caprae 0.01 788193 788193 S 46126 Staphylococcus chromogenes 0.01 782297 782297 S 61015 Staphylococcus succinus 0.01 763751 763751 S 42858 Staphylococcus lentus 0.01 760822 760822 S 985762 Staphylococcus agnetis 0.01 760799 760799 S 29384 Staphylococcus kloosii 0.01 756205 756205 S 170573 Staphylococcus pettenkoferi 0.01 744051 744051 S 1295 Staphylococcus schleiferi 0.01 738692 738692 S 308354 Staphylococcus simiae 0.01 736761 736761 S 29378 Staphylococcus arlettae 0.01 714153 714153 S 71237 Staphylococcus vitulinus 0.01 705321 705321 S 155085 Staphylococcus lutrae 0.01 704142 704142 S 46127 Staphylococcus felis 0.01 697084 697084 S 643214 Staphylococcus stepanovicii 0.01 664006 599452 S 1281 Staphylococcus carnosus 0.00 64554 0 S1 147448 Staphylococcus carnosus subsp. carnosus 0.00 64554 64554 S2 396513 Staphylococcus carnosus subsp. carnosus TM300 0.01 662625 662625 S 29379 Staphylococcus auricularis 0.01 639933 639933 S 1284 Staphylococcus hyicus 0.01 634710 634710 S 70255 Staphylococcus condimenti 0.01 615677 615677 S 1292 Staphylococcus warneri 0.01 614348 614348 S 1294 Staphylococcus muscae 0.01 566422 566422 S 246432 Staphylococcus equorum 0.01 539625 539625 S 53344 Staphylococcus delphini 0.01 520150 520150 S 70258 Staphylococcus piscifermentans 0.01 460375 460375 S 1654388 Staphylococcus schweitzeri 0.00 427936 427936 S 150056 Staphylococcus fleurettii 0.00 190561 190561 S 985002 Staphylococcus argenteus 0.03 2816132 103992 G 69965 Macrococcus 0.01 1302925 1302925 S 1855823 Macrococcus canis 0.01 738264 578983 S 69966 Macrococcus caseolyticus 0.00 159281 159281 S1 458233 Macrococcus caseolyticus JCSC5402 0.01 670951 0 G1 2619255 unclassified Macrococcus 0.01 670951 670951 S 1898474 Macrococcus sp. IME1552 0.01 861220 0 G 45669 Salinicoccus 0.01 859826 859826 S 407035 Salinicoccus halodurans 0.00 1394 0 G1 2628837 unclassified Salinicoccus 0.00 1394 1394 S 1871624 Salinicoccus sp. 0.01 680293 0 G 227979 Jeotgalicoccus 0.01 680293 680293 S 1461582 Jeotgalicoccus saudimassiliensis 0.01 510953 0 G 2005363 Auricoccus 0.01 510953 510953 S 1849491 Auricoccus indicus 0.36 32694977 42021 F 186818 Planococcaceae 0.13 11840511 1529241 G 1372 Planococcus 0.03 2902689 585 G1 2662419 unclassified Planococcus 0.01 1259172 1259172 S 2213202 Planococcus sp. Y42 0.01 849665 849665 S 1526927 Planococcus sp. PAMC 21323 0.01 789873 789873 S 2058136 Planococcus sp. MB-3u-03 0.00 3394 3394 S 378212 Planococcus sp. ZOYM 0.01 1088264 0 S 161360 Planococcus antarcticus 0.01 1088264 1088264 S1 1185653 Planococcus antarcticus DSM 14505 0.01 905185 905185 S 1302659 Planococcus versutus 0.01 867975 867975 S 1215089 Planococcus halocryophilus 0.01 851712 851712 S 414778 Planococcus donghaensis 0.01 832567 832567 S 1038856 Planococcus plakortidis 0.01 781327 781327 S 200991 Planococcus rifietoensis 0.01 717292 717292 S 1176255 Planococcus dechangensis 0.01 706401 706401 S 192421 Planococcus maritimus 0.00 326691 326691 S 1374 Planococcus kocurii 0.00 325915 325915 S 1598147 Planococcus faecalis 0.00 5252 5252 S 1373 Planococcus citreus 0.11 9915443 1175287 G 1569 Sporosarcina 0.04 3755883 3755883 S 1571 Sporosarcina ureae 0.03 2757358 740744 G1 2647733 unclassified Sporosarcina 0.01 1021830 1021830 S 2283194 Sporosarcina sp. PTS2304 0.01 538449 538449 S 2762563 Sporosarcina sp. resist 0.00 238448 238448 S 1930546 Sporosarcina sp. P37 0.00 217887 217887 S 1930764 Sporosarcina sp. P33 0.01 930824 930824 S 298596 Sporosarcina ureilytica 0.01 880956 880956 S 1474 Sporosarcina pasteurii 0.00 415135 415135 S 1476 Sporosarcina psychrophila 0.03 2833876 4322 G 648800 Solibacillus 0.02 1582507 1190252 S 76853 Solibacillus silvestris 0.00 392255 392255 S1 1002809 Solibacillus silvestris StLB046 0.01 1247047 0 G1 2637870 unclassified Solibacillus 0.01 1247047 1247047 S 2048654 Solibacillus sp. R5-41 0.02 1953958 506 G 651660 Paenisporosarcina 0.01 1199766 1199766 S 417367 Paenisporosarcina antarctica 0.01 753686 0 G1 2642018 unclassified Paenisporosarcina 0.01 753686 753686 S 2320858 Paenisporosarcina sp. K2R23-3 0.02 1683719 7224 G 1649 Kurthia 0.01 872605 0 G1 2644826 unclassified Kurthia 0.01 872605 872605 S 1750719 Kurthia sp. 11kri321 0.01 803890 803890 S 1650 Kurthia zopfii 0.01 1264913 0 G 157226 Jeotgalibacillus 0.01 1264913 1264913 S 1508404 Jeotgalibacillus malaysiensis 0.01 1216685 0 G 162291 Planomicrobium 0.01 1216685 1216685 S 459472 Planomicrobium glaciei 0.01 1020594 0 G 648802 Rummeliibacillus 0.01 1020594 1020594 S 241244 Rummeliibacillus stabekisii 0.01 923239 0 G 160795 Ureibacillus 0.01 923239 923239 S 51173 Ureibacillus thermosphaericus 0.00 18 0 G 941338 Bhargavaea 0.00 18 18 S 394098 Bhargavaea cecembensis 0.14 12465299 1023 F 186820 Listeriaceae 0.13 11350659 732576 G 1637 Listeria 0.04 3958671 3760850 S 1639 Listeria monocytogenes 0.00 119634 119634 S1 393119 Listeria monocytogenes FSL J1-208 0.00 13367 13367 S1 879089 Listeria monocytogenes SLCC2540 0.00 11627 2048 S1 1906951 Listeria monocytogenes serotype 1/2a 0.00 8994 8994 S2 1386004 Listeria monocytogenes serotype 1/2a str. 10-0819 0.00 170 170 S2 1196186 Listeria monocytogenes serotype 1/2a str. 08-7669 0.00 128 128 S2 1196176 Listeria monocytogenes serotype 1/2a str. 88-0478 0.00 99 99 S2 1196177 Listeria monocytogenes serotype 1/2a str. 95-0093 0.00 72 72 S2 1196180 Listeria monocytogenes serotype 1/2a str. 02-5993 0.00 21 21 S2 1196179 Listeria monocytogenes serotype 1/2a str. 99-6370 0.00 15 15 S2 1196192 Listeria monocytogenes serotype 1/2a str. 10-5024 0.00 13 13 S2 1196185 Listeria monocytogenes serotype 1/2a str. 08-7374 0.00 12 12 S2 1196168 Listeria monocytogenes serotype 1/2a str. 10-4758 0.00 12 12 S2 1196183 Listeria monocytogenes serotype 1/2a str. 08-6569 0.00 10 10 S2 1196182 Listeria monocytogenes serotype 1/2a str. 08-6056 0.00 9 9 S2 1196165 Listeria monocytogenes serotype 1/2a str. 10-0812 0.00 9 9 S2 1196178 Listeria monocytogenes serotype 1/2a str. 98-2035 0.00 8 8 S2 1196181 Listeria monocytogenes serotype 1/2a str. 04-5457 0.00 6 6 S2 1196184 Listeria monocytogenes serotype 1/2a str. 08-6997 0.00 1 1 S2 1196191 Listeria monocytogenes serotype 1/2a str. 10-1321 0.00 10188 10188 S1 1126011 Listeria monocytogenes 07PF0776 0.00 10179 10179 S1 879090 Listeria monocytogenes SLCC7179 0.00 10174 8407 S1 2065118 Listeria monocytogenes serotype 4b 0.00 680 680 S2 568819 Listeria monocytogenes serotype 4b str. CLIP 80459 0.00 655 655 S2 265669 Listeria monocytogenes serotype 4b str. F2365 0.00 276 276 S2 1196161 Listeria monocytogenes serotype 4b str. 81-0861 0.00 63 63 S2 1196162 Listeria monocytogenes serotype 4b str. 10-0809 0.00 57 57 S2 1196159 Listeria monocytogenes serotype 4b str. 81-0558 0.00 36 36 S2 1196160 Listeria monocytogenes serotype 4b str. 81-0592 0.00 7821 7821 S1 169963 Listeria monocytogenes EGD-e 0.00 2119 2119 S1 930782 Listeria monocytogenes J1-220 0.00 1629 1629 S1 930781 Listeria monocytogenes J1816 0.00 1603 1603 S1 863767 Listeria monocytogenes serotype 7 str. SLCC2482 0.00 1530 1530 S1 393130 Listeria monocytogenes J0161 0.00 891 891 S1 393126 Listeria monocytogenes FSL R2-561 0.00 681 681 S1 1288295 Listeria monocytogenes 6179 0.00 619 619 S1 882095 Listeria monocytogenes ATCC 19117 0.00 599 599 S1 393127 Listeria monocytogenes Finland 1998 0.00 588 588 S1 932919 Listeria monocytogenes SLCC2755 0.00 562 562 S1 882094 Listeria monocytogenes L312 0.00 453 453 S1 1457188 Listeria monocytogenes WSLC1042 0.00 426 426 S1 393133 Listeria monocytogenes 10403S 0.00 380 368 S1 2049008 Listeria monocytogenes serotype 1/2c 0.00 12 12 S2 1196194 Listeria monocytogenes serotype 1/2c str. 10-5026 0.00 378 0 S1 2291968 Listeria monocytogenes serotype 3c 0.00 378 378 S2 1196195 Listeria monocytogenes serotype 3c str. 10-5027 0.00 320 320 S1 882020 Listeria monocytogenes SLCC2479 0.00 305 305 S1 1299895 Listeria monocytogenes CFSAN002349 0.00 227 227 S1 1027396 Listeria monocytogenes str. Scott A 0.00 214 214 S1 1457187 Listeria monocytogenes WSLC1001 0.00 204 204 S1 882096 Listeria monocytogenes SLCC5850 0.00 203 203 S1 1437838 Listeria monocytogenes R479a 0.00 178 178 S1 552536 Listeria monocytogenes HCC23 0.00 135 135 S1 882097 Listeria monocytogenes SLCC2376 0.00 128 128 S1 932920 Listeria monocytogenes SLCC2372 0.00 126 126 S1 879088 Listeria monocytogenes SLCC2378 0.00 107 107 S1 563174 Listeria monocytogenes L99 0.00 83 0 S1 2559246 Listeria monocytogenes serotype 3a 0.00 83 83 S2 1386006 Listeria monocytogenes serotype 3a str. 88-1059 0.00 64 64 S1 1334565 Listeria monocytogenes EGD 0.00 45 45 S1 653938 Listeria monocytogenes 08-5578 0.00 26 26 S1 637381 Listeria monocytogenes 08-5923 0.00 8 0 S1 2291966 Listeria monocytogenes serotype 1/2b 0.00 8 8 S2 1196164 Listeria monocytogenes serotype 1/2b str. 10-0811 0.02 1408210 741318 S 1638 Listeria ivanovii 0.01 659056 659056 S1 202752 Listeria ivanovii subsp. londoniensis 0.00 7569 46 S1 202751 Listeria ivanovii subsp. ivanovii 0.00 7523 7523 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 267 267 S1 1457190 Listeria ivanovii WSLC3009 0.01 1066916 624013 S 1642 Listeria innocua 0.00 312628 312628 S1 702455 Listeria innocua FSL J1-023 0.00 130275 130275 S1 272626 Listeria innocua Clip11262 0.01 1040396 1040396 S 1006155 Listeria weihenstephanensis 0.01 1013920 710556 S 1640 Listeria seeligeri 0.00 217352 217352 S1 683837 Listeria seeligeri serovar 1/2b str. SLCC3954 0.00 86012 86012 S1 702453 Listeria seeligeri FSL N1-067 0.01 828738 828738 S 1641 Listeria grayi 0.01 685802 685659 S 1643 Listeria welshimeri 0.00 143 143 S1 386043 Listeria welshimeri serovar 6b str. SLCC5334 0.01 615430 0 G1 2642072 unclassified Listeria 0.01 615430 615430 S 1844999 Listeria sp. PSOL-1 0.01 1113617 0 G 2755 Brochothrix 0.01 1113617 1113617 S 2756 Brochothrix thermosphacta 0.10 9183616 41 O1 539002 Bacillales incertae sedis 0.07 6603523 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.07 6603523 691589 G 33986 Exiguobacterium 0.03 3093254 453432 G1 2644629 unclassified Exiguobacterium 0.01 920618 920618 S 360911 Exiguobacterium sp. AT1b 0.01 883931 883931 S 2051906 Exiguobacterium sp. N4-1P 0.01 464780 464780 S 1399115 Exiguobacterium sp. MH3 0.00 188232 188232 S 1224749 Exiguobacterium sp. ZWU0009 0.00 160083 160083 S 1849031 Exiguobacterium sp. U13-1 0.00 22178 22178 S 1389960 Exiguobacterium sp. S3-2 0.01 844236 0 S 332410 Exiguobacterium sibiricum 0.01 844236 844236 S1 262543 Exiguobacterium sibiricum 255-15 0.01 804503 804503 S 340146 Exiguobacterium mexicanum 0.01 780862 0 S 132920 Exiguobacterium antarcticum 0.01 780862 780862 S1 1087448 Exiguobacterium antarcticum B7 0.00 378179 378179 S 41170 Exiguobacterium acetylicum 0.00 10900 10900 S 518693 Exiguobacterium arabatum 0.03 2580052 0 O2 539738 Bacillales Family XI. Incertae Sedis 0.03 2580052 45978 G 1378 Gemella 0.01 1024155 1024155 S 1379 Gemella haemolysans 0.01 593297 593297 S 29391 Gemella morbillorum 0.01 460508 418620 G1 2624949 unclassified Gemella 0.00 23710 23710 S 1785995 Gemella sp. oral taxon 928 0.00 18178 18178 S 2040624 Gemella sp. ND 6198 0.01 456114 456114 S 84135 Gemella sanguinis 0.08 6853528 408 F 186823 Alicyclobacillaceae 0.03 2916130 26478 G 432330 Tumebacillus 0.02 1540265 1540265 S 1903704 Tumebacillus avium 0.01 1349387 1349387 S 1214604 Tumebacillus algifaecis 0.02 2153107 372461 G 1129704 Kyrpidia 0.01 1102224 1102224 S 2055160 Kyrpidia spormannii 0.01 678422 0 S 33943 Kyrpidia tusciae 0.01 678422 678422 S1 562970 Kyrpidia tusciae DSM 2912 0.02 1783883 0 G 29330 Alicyclobacillus 0.02 1783883 0 S 405212 Alicyclobacillus acidocaldarius 0.02 1783883 152288 S1 1388 Alicyclobacillus acidocaldarius subsp. acidocaldarius 0.01 834869 834869 S2 521098 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 0.01 796726 796726 S2 1048834 Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 0.07 6090983 2449 F 186824 Thermoactinomycetaceae 0.02 2179521 1406 G 1274351 Kroppenstedtia 0.01 1119285 1119285 S 714067 Kroppenstedtia eburnea 0.01 1058830 1058830 S 1380685 Kroppenstedtia pulmonis 0.01 1102540 0 G 1677050 Novibacillus 0.01 1102540 1102540 S 1471761 Novibacillus thermophilus 0.01 1050944 0 G 292635 Laceyella 0.01 1050944 1050944 S 37482 Laceyella sacchari 0.01 891982 0 G 2023 Thermoactinomyces 0.01 891982 891982 S 2026 Thermoactinomyces vulgaris 0.01 863547 0 G 2689589 Staphylospora 0.01 863547 863547 S 2490858 Staphylospora marina 0.03 2309258 18 F 186821 Sporolactobacillaceae 0.01 1202750 0 G 2077 Sporolactobacillus 0.01 1202750 1202750 S 269673 Sporolactobacillus terrae 0.01 1106490 0 F1 663587 Sporolactobacillaceae incertae sedis 0.01 1106490 0 S 85683 [Bacillus] selenitireducens 0.01 1106490 1106490 S1 439292 [Bacillus] selenitireducens MLS10 2.54 229299709 642761 O 186826 Lactobacillales 1.03 92795697 1843459 F 33958 Lactobacillaceae 0.86 77923310 3047737 G 1578 Lactobacillus 0.05 4494398 1249920 G1 655183 Lactobacillus casei group 0.02 1663484 1407062 S 1597 Lactobacillus paracasei 0.00 179612 123817 S1 47714 Lactobacillus paracasei subsp. paracasei 0.00 34702 34702 S2 1226298 Lactobacillus paracasei subsp. paracasei JCM 8130 0.00 21093 21093 S2 537973 Lactobacillus paracasei subsp. paracasei 8700:2 0.00 42748 42748 S1 321967 Lactobacillus paracasei ATCC 334 0.00 33162 33162 S1 1446494 Lactobacillus paracasei N1115 0.00 769 769 S1 903522 Lactobacillus paracasei TXW 0.00 131 131 S1 113557 Lactobacillus paracasei subsp. tolerans 0.01 1042097 671347 S 1582 Lactobacillus casei 0.00 345538 345538 S1 1423732 Lactobacillus casei DSM 20011 = JCM 1134 = ATCC 393 0.00 25212 25212 S1 1051650 Lactobacillus casei 12A 0.01 538897 538897 S 57037 Lactobacillus zeae 0.04 3231372 139034 G1 2620435 unclassified Lactobacillus 0.01 648171 648171 S 2695882 Lactobacillus sp. 3B(2020) 0.01 633023 633023 S 2099788 Lactobacillus sp. CBA3605 0.01 601794 601794 S 2099789 Lactobacillus sp. CBA3606 0.01 548141 548141 S 2714036 Lactobacillus sp. NFFJ11 0.00 381511 381511 S 2419772 Lactobacillus sp. BHWM-4 0.00 256251 256251 S 1545702 Lactobacillus sp. wkB8 0.00 14203 14203 S 2690380 Lactobacillus sp. JM1 0.00 7359 7359 S 2108362 Lactobacillus sp. D1501 0.00 1098 1098 S 1591 Lactobacillus sp. 0.00 787 787 S 1248330 Lactobacillus sp. PC121B 0.03 2943291 2661110 S 1598 Lactobacillus reuteri 0.00 104379 104379 S1 1358027 Lactobacillus reuteri TD1 0.00 75270 75270 S1 491077 Lactobacillus reuteri SD2112 0.00 50244 50244 S1 1340495 Lactobacillus reuteri I5007 0.00 46818 46818 S1 927703 Lactobacillus reuteri ATCC 53608 0.00 3024 3024 S1 349123 Lactobacillus reuteri 100-23 0.00 2180 2180 S1 1273150 Lactobacillus reuteri 1063 0.00 201 201 S1 557433 Lactobacillus reuteri JCM 1112 0.00 65 65 S1 557436 Lactobacillus reuteri DSM 20016 0.03 2625376 1931335 S 1589 Lactobacillus pentosus 0.01 694041 694041 S1 1136177 Lactobacillus pentosus KCA1 0.03 2329708 2265121 S 1580 Lactobacillus brevis 0.00 41604 41604 S1 1001583 Lactobacillus brevis KB290 0.00 22983 22983 S1 387344 Lactobacillus brevis ATCC 367 0.02 2056626 2000169 S 47715 Lactobacillus rhamnosus 0.00 36029 36029 S1 1380361 Lactobacillus rhamnosus DSM 14870 0.00 11031 11031 S1 1088720 Lactobacillus rhamnosus ATCC 8530 0.00 6994 6994 S1 568704 Lactobacillus rhamnosus Lc 705 0.00 1719 1719 S1 486408 Lactobacillus rhamnosus HN001 0.00 372 372 S1 1318634 Lactobacillus rhamnosus LOCK908 0.00 293 293 S1 1316933 Lactobacillus rhamnosus LOCK900 0.00 19 19 S1 568703 Lactobacillus rhamnosus GG 0.02 2010564 966660 S 1584 Lactobacillus delbrueckii 0.00 359289 235391 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 66858 66858 S2 767455 Lactobacillus delbrueckii subsp. bulgaricus ND02 0.00 23700 23700 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 16869 16869 S2 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 0.00 16471 16471 S2 353496 Lactobacillus delbrueckii subsp. bulgaricus 2038 0.00 208674 130468 S1 83684 Lactobacillus delbrueckii subsp. delbrueckii 0.00 78206 78206 S2 1423823 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 0.00 187088 150821 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 36267 36267 S2 888027 Lactobacillus delbrueckii subsp. lactis DSM 20072 0.00 138857 138857 S1 249265 Lactobacillus delbrueckii subsp. indicus 0.00 88747 88747 S1 1050107 Lactobacillus delbrueckii subsp. sunkii 0.00 61249 0 S1 1537158 Lactobacillus delbrueckii subsp. jakobsenii 0.00 61249 61249 S2 1217420 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 0.02 1889987 1693494 S 33959 Lactobacillus johnsonii 0.00 68968 68968 S1 633699 Lactobacillus johnsonii FI9785 0.00 49745 49745 S1 1408186 Lactobacillus johnsonii N6.2 0.00 43234 43234 S1 909954 Lactobacillus johnsonii DPC 6026 0.00 34546 34546 S1 257314 Lactobacillus johnsonii NCC 533 0.02 1850925 1811495 S 1599 Lactobacillus sakei 0.00 39430 1449 S1 214326 Lactobacillus sakei subsp. sakei 0.00 23819 23819 S2 314315 Lactobacillus sakei subsp. sakei 23K 0.00 14162 14162 S2 1423833 Lactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 0.02 1770487 1770487 S 231049 Lactobacillus rossiae 0.02 1769776 1619639 S 1624 Lactobacillus salivarius 0.00 90289 90289 S1 362948 Lactobacillus salivarius UCC118 0.00 59848 59848 S1 1194971 Lactobacillus salivarius str. Ren 0.02 1619554 1619554 S 304207 Lactobacillus harbinensis 0.02 1445696 1369885 S 47770 Lactobacillus crispatus 0.00 75811 75811 S1 748671 Lactobacillus crispatus ST1 0.02 1435166 1435166 S 1588 Lactobacillus hilgardii 0.02 1409020 1380038 S 28038 Lactobacillus curvatus 0.00 28982 28982 S1 1293592 Lactobacillus curvatus JCM 1096 = DSM 20019 0.01 1353176 930634 S 1610 Lactobacillus coryniformis 0.00 246427 0 S1 115542 Lactobacillus coryniformis subsp. torquens 0.00 246427 246427 S2 1423822 Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 0.00 176115 0 S1 115541 Lactobacillus coryniformis subsp. coryniformis 0.00 176115 176115 S2 913848 Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 0.01 1155206 1155206 S 60520 Lactobacillus paraplantarum 0.01 1151316 1151316 S 267363 Lactobacillus zymae 0.01 1128601 1128601 S 240427 Lactobacillus paracollinoides 0.01 1127862 752805 S 1581 Lactobacillus buchneri 0.00 349338 0 S1 2737512 Lactobacillus buchneri subsp. silagei 0.00 349338 349338 S2 1071400 Lactobacillus buchneri subsp. silagei CD034 0.00 25719 25719 S1 511437 Lactobacillus buchneri NRRL B-30929 0.01 1028819 690830 S 1604 Lactobacillus amylovorus 0.00 183408 183408 S1 1423723 Lactobacillus amylovorus DSM 20531 0.00 95531 95531 S1 695560 Lactobacillus amylovorus GRL 1112 0.00 59050 59050 S1 695562 Lactobacillus amylovorus GRL1118 0.01 1001556 623347 S 97478 Lactobacillus mucosae 0.00 378209 378209 S1 1130798 Lactobacillus mucosae LM1 0.01 965611 965611 S 1607 Lactobacillus bifermentans 0.01 955345 955345 S 88233 Lactobacillus manihotivorans 0.01 945172 945172 S 375175 Lactobacillus backii 0.01 906691 906691 S 637971 Lactobacillus koreensis 0.01 902468 902196 S 109790 Lactobacillus jensenii 0.00 272 272 S1 525329 Lactobacillus jensenii JV-V16 0.01 877465 877465 S 1605 Lactobacillus animalis 0.01 858980 858980 S 1622 Lactobacillus murinus 0.01 798089 711334 S 1587 Lactobacillus helveticus 0.00 26000 26000 S1 326425 Lactobacillus helveticus CNRZ32 0.00 21104 21104 S1 767456 Lactobacillus helveticus H9 0.00 19607 19607 S1 767462 Lactobacillus helveticus H10 0.00 13033 13033 S1 405566 Lactobacillus helveticus DPC 4571 0.00 3244 3244 S1 585520 Lactobacillus helveticus DSM 20075 = CGMCC 1.1877 0.00 2985 2985 S1 880633 Lactobacillus helveticus R0052 0.00 782 782 S1 44272 Lactobacillus helveticus subsp. jugurti 0.01 787949 787949 S 152331 Lactobacillus parabuchneri 0.01 782272 782272 S 1074467 Lactobacillus heilongjiangensis 0.01 778488 778488 S 1007676 Lactobacillus ginsenosidimutans 0.01 774130 774130 S 2292255 Lactobacillus suantsaii 0.01 765732 765732 S 2304606 Lactobacillus zhachilii 0.01 755406 755406 S 1847728 Lactobacillus allii 0.01 736946 736946 S 147802 Lactobacillus iners 0.01 723284 723284 S 1600 Lactobacillus acetotolerans 0.01 721120 721120 S 83526 Lactobacillus paralimentarius 0.01 714203 714203 S 33962 Lactobacillus kefiri 0.01 684882 683031 S 1579 Lactobacillus acidophilus 0.00 1755 1755 S1 272621 Lactobacillus acidophilus NCFM 0.00 96 96 S1 1314884 Lactobacillus acidophilus La-14 0.01 683902 683902 S 89059 Lactobacillus acidipiscis 0.01 680084 0 S 1193095 Lactobacillus hokkaidonensis 0.01 680084 680084 S1 1291742 Lactobacillus hokkaidonensis JCM 18461 0.01 672789 0 S 1602 Lactobacillus alimentarius 0.01 672789 672789 S1 1423720 Lactobacillus alimentarius DSM 20249 0.01 651620 651620 S 1138822 Lactobacillus curieae 0.01 647225 647225 S 1601 Lactobacillus agilis 0.01 629476 629476 S 392416 Lactobacillus crustorum 0.01 626135 626135 S 164393 Lactobacillus fuchuensis 0.01 609931 609931 S 1296540 Lactobacillus nenjiangensis 0.01 607021 607021 S 176292 Lactobacillus malefermentans 0.01 603918 0 S 1623 Lactobacillus ruminis 0.01 603918 603918 S1 1069534 Lactobacillus ruminis ATCC 27782 0.01 578119 0 S 1612 Lactobacillus farciminis 0.01 578119 578119 S1 936140 Lactobacillus farciminis KCTC 3681 = DSM 20184 0.01 578008 578008 S 227942 Lactobacillus gastricus 0.01 570057 559716 S 267818 Lactobacillus kefiranofaciens 0.00 7320 7320 S1 1033837 Lactobacillus kefiranofaciens ZW3 0.00 3021 3021 S1 190905 Lactobacillus kefiranofaciens subsp. kefiranofaciens 0.01 569092 569092 S 938155 Lactobacillus futsaii 0.01 562224 562224 S 1218493 Lactobacillus kullabergensis 0.01 561398 283292 S 1596 Lactobacillus gasseri 0.00 155143 155143 S1 1380360 Lactobacillus gasseri DSM 14869 0.00 122963 122963 S1 324831 Lactobacillus gasseri ATCC 33323 = JCM 1131 0.01 561039 561039 S 51664 Lactobacillus dextrinicus 0.01 559654 559654 S 1303590 Lactobacillus bombi 0.01 548708 548708 S 1633 Lactobacillus vaginalis 0.01 542843 542843 S 228229 Lactobacillus saerimneri 0.01 540409 0 S 293371 Lactobacillus oligofermentans 0.01 540409 540409 S1 1423778 Lactobacillus oligofermentans DSM 15707 = LMG 22743 0.01 536537 536537 S 83683 Lactobacillus amylolyticus 0.01 536283 536283 S 104955 Lactobacillus frumenti 0.01 519356 519356 S 35787 Lactobacillus pontis 0.01 503556 503556 S 60519 Lactobacillus graminis 0.01 503057 503057 S 303541 Lactobacillus apis 0.01 478110 478110 S 148814 Lactobacillus kunkeei 0.01 462873 0 S 1603 Lactobacillus amylophilus 0.01 462873 462873 S1 1423721 Lactobacillus amylophilus DSM 20533 = JCM 1125 0.01 459204 459204 S 2269374 Lactobacillus terrae 0.00 437520 364869 S 1625 Lactobacillus sanfranciscensis 0.00 72651 72651 S1 714313 Lactobacillus sanfranciscensis TMW 1.1304 0.00 430723 430723 S 1614 Lactobacillus fructivorans 0.00 411483 411483 S 53444 Lactobacillus lindneri 0.00 360114 281796 S 2107999 Lactobacillus paragasseri 0.00 78318 78318 S1 525326 Lactobacillus paragasseri JV-V03 0.00 238005 238005 S 1218494 Lactobacillus helsingborgensis 0.00 152333 152333 S 52242 Lactobacillus gallinarum 0.00 52 52 S 238013 Lactobacillus rennini 0.05 4762187 42676 G 1253 Pediococcus 0.02 1632424 0 G1 1670797 Pediococcus acidilactici group 0.02 1632424 1632424 S 1254 Pediococcus acidilactici 0.01 1251845 1187287 S 1255 Pediococcus pentosaceus 0.00 49593 49593 S1 1408206 Pediococcus pentosaceus SL4 0.00 14965 14965 S1 278197 Pediococcus pentosaceus ATCC 25745 0.01 664541 664541 S 51663 Pediococcus damnosus 0.01 591432 591432 S 114090 Pediococcus inopinatus 0.01 578947 573642 S 187452 Pediococcus claussenii 0.00 5305 5305 S1 701521 Pediococcus claussenii ATCC BAA-344 0.00 322 322 S 54062 Pediococcus parvulus 0.04 3658821 0 G 2767842 Lactiplantibacillus 0.04 3658821 3431959 S 1590 Lactiplantibacillus plantarum 0.00 121459 116187 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.00 5236 5236 S2 767468 Lactobacillus plantarum subsp. plantarum P-8 0.00 36 36 S2 889932 Lactobacillus plantarum subsp. plantarum ST-III 0.00 52358 52358 S1 271881 Lactiplantibacillus plantarum subsp. argentoratensis 0.00 18814 18814 S1 220668 Lactobacillus plantarum WCFS1 0.00 18455 18455 S1 1327988 Lactobacillus plantarum 16 0.00 8047 8047 S1 1304889 Lactobacillus plantarum CMPG5300 0.00 7367 7367 S1 1284663 Lactobacillus plantarum ZJ316 0.00 248 248 S1 644042 Lactobacillus plantarum JDM1 0.00 114 114 S1 1300221 Lactobacillus plantarum DOMLa 0.02 2169178 28990 G 2767888 Liquorilactobacillus 0.01 722375 722375 S 1618 Lactobacillus mali 0.01 711422 711422 S 468911 Lactobacillus hordei 0.01 706391 706391 S 82688 Liquorilactobacillus nagelii 0.02 1929338 0 G 2742598 Limosilactobacillus 0.02 1929338 1819531 S 1613 Limosilactobacillus fermentum 0.00 38889 38889 S1 1381124 Lactobacillus fermentum 3872 0.00 38632 38632 S1 334390 Lactobacillus fermentum IFO 3956 0.00 32286 32286 S1 767453 Lactobacillus fermentum F-6 0.01 509404 0 G 2767874 Acetilactobacillus 0.01 509404 509404 S 1720083 Acetilactobacillus jinshanensis 0.77 69196427 81028 F 1300 Streptococcaceae 0.66 59341401 12191992 G 1301 Streptococcus 0.06 5039282 680187 G1 2608887 unclassified Streptococcus 0.01 696181 696181 S 2173853 Streptococcus sp. Z15 0.01 474498 474498 S 712633 Streptococcus sp. oral taxon 431 0.00 399632 399632 S 712623 Streptococcus sp. oral taxon 061 0.00 286154 286154 S 1316408 Streptococcus sp. HSISM1 0.00 268755 268755 S 2610896 Streptococcus sp. LPB0220 0.00 264324 264324 S 2598453 Streptococcus sp. 116-D4 0.00 259953 259953 S 1759399 Streptococcus sp. A12 0.00 243491 243491 S 1902136 Streptococcus sp. NPS 308 0.00 157972 157972 S 1316412 Streptococcus sp. HSISS3 0.00 147019 147019 S 1316411 Streptococcus sp. HSISS2 0.00 146093 146093 S 2576376 Streptococcus sp. 1643 0.00 123062 123062 S 1940319 Streptococcus sp. DAT741 0.00 119598 119598 S 1156433 Streptococcus sp. I-P16 0.00 106647 106647 S 1156431 Streptococcus sp. I-G2 0.00 101070 101070 S 1839799 Streptococcus sp. FDAARGOS_192 0.00 97957 97957 S 2686210 Streptococcus sp. CNU G2 0.00 86784 86784 S 2763068 Streptococcus sp. NSJ-72 0.00 85786 85786 S 2698804 Streptococcus sp. CNU G3 0.00 85115 85115 S 712624 Streptococcus sp. oral taxon 064 0.00 81191 81191 S 2684658 Streptococcus sp. CNU 77-61 0.00 78349 78349 S 1316409 Streptococcus sp. HSISB1 0.00 29827 29827 S 2583584 Streptococcus sp. NCTC 11567 0.00 6155 6155 S 1316410 Streptococcus sp. HSISS1 0.00 4398 4398 S 1319 Streptococcus sp. 'group B' 0.00 3897 3897 S 2420309 Streptococcus sp. FDAARGOS_521 0.00 2967 2967 S 2420310 Streptococcus sp. FDAARGOS_522 0.00 2220 2220 S 2420308 Streptococcus sp. FDAARGOS_520 0.04 4056522 3700104 S 1307 Streptococcus suis 0.00 80773 80773 S1 1004952 Streptococcus suis D12 0.00 78867 78867 S1 1276647 Streptococcus suis TL13 0.00 75564 75564 S1 1214179 Streptococcus suis 6407 0.00 69739 69739 S1 1340847 Streptococcus suis T15 0.00 17013 17013 S1 1005042 Streptococcus suis D9 0.00 8139 8139 S1 423211 Streptococcus suis GZ1 0.00 7098 7098 S1 568814 Streptococcus suis BM407 0.00 6705 6705 S1 1005041 Streptococcus suis SS12 0.00 4113 4113 S1 993512 Streptococcus suis A7 0.00 2600 2600 S1 1007064 Streptococcus suis ST3 0.00 1709 1709 S1 945704 Streptococcus suis JS14 0.00 1308 1308 S1 672190 Streptococcus suis 05HAS68 0.00 1128 1128 S1 1004951 Streptococcus suis ST1 0.00 789 789 S1 1380773 Streptococcus suis YB51 0.00 587 587 S1 1246365 Streptococcus suis SC070731 0.00 207 207 S1 1184252 Streptococcus suis S735 0.00 47 47 S1 218494 Streptococcus suis P1/7 0.00 32 32 S1 568813 Streptococcus suis SC84 0.03 2873131 13267 G1 119603 Streptococcus dysgalactiae group 0.02 1598753 505838 S 1336 Streptococcus equi 0.01 993987 990268 S1 40041 Streptococcus equi subsp. zooepidemicus 0.00 2874 2874 S2 552526 Streptococcus equi subsp. zooepidemicus MGCS10565 0.00 458 458 S2 1403449 Streptococcus equi subsp. zooepidemicus CY 0.00 387 387 S2 1051072 Streptococcus equi subsp. zooepidemicus ATCC 35246 0.00 98928 0 S1 148942 Streptococcus equi subsp. equi 0.00 98928 98928 S2 553482 Streptococcus equi subsp. equi 4047 0.01 1261111 464196 S 1334 Streptococcus dysgalactiae 0.00 435820 435820 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.00 361095 311247 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.00 21217 21217 S2 486410 Streptococcus dysgalactiae subsp. equisimilis GGS_124 0.00 13841 13841 S2 759913 Streptococcus dysgalactiae subsp. equisimilis AC-2713 0.00 13081 13081 S2 617121 Streptococcus dysgalactiae subsp. equisimilis RE378 0.00 1709 1709 S2 663954 Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 0.03 2388486 2196895 S 1305 Streptococcus sanguinis 0.00 191591 191591 S1 388919 Streptococcus sanguinis SK36 0.02 1839639 1746056 S 1313 Streptococcus pneumoniae 0.00 20113 20113 S1 869309 Streptococcus pneumoniae SPNA45 0.00 15487 15487 S1 487214 Streptococcus pneumoniae Hungary19A-6 0.00 9366 9366 S1 488221 Streptococcus pneumoniae 70585 0.00 8575 8575 S1 574093 Streptococcus pneumoniae AP200 0.00 7390 7390 S1 512566 Streptococcus pneumoniae G54 0.00 7313 7313 S1 189423 Streptococcus pneumoniae 670-6B 0.00 4541 4541 S1 488222 Streptococcus pneumoniae JJA 0.00 4051 4051 S1 516950 Streptococcus pneumoniae CGSP14 0.00 3339 3339 S1 1130804 Streptococcus pneumoniae ST556 0.00 2889 2889 S1 1159083 Streptococcus pneumoniae PCS8235 0.00 2418 2418 S1 869216 Streptococcus pneumoniae INV200 0.00 1773 1773 S1 697283 Streptococcus pneumoniae gamPNI0373 0.00 1116 1116 S1 869269 Streptococcus pneumoniae INV104 0.00 1033 1033 S1 487213 Streptococcus pneumoniae Taiwan19F-14 0.00 810 810 S1 869303 Streptococcus pneumoniae SPN034156 0.00 692 692 S1 869312 Streptococcus pneumoniae SPN033038 0.00 614 614 S1 869304 Streptococcus pneumoniae SPN034183 0.00 577 577 S1 869311 Streptococcus pneumoniae SPN032672 0.00 409 409 S1 170187 Streptococcus pneumoniae TIGR4 0.00 334 334 S1 525381 Streptococcus pneumoniae TCH8431/19A 0.00 281 281 S1 869215 Streptococcus pneumoniae OXC141 0.00 178 178 S1 1408179 Streptococcus pneumoniae A026 0.00 119 119 S1 171101 Streptococcus pneumoniae R6 0.00 89 89 S1 488223 Streptococcus pneumoniae P1031 0.00 42 42 S1 869307 Streptococcus pneumoniae SPN994039 0.00 17 17 S1 869306 Streptococcus pneumoniae SPN994038 0.00 17 17 S1 373153 Streptococcus pneumoniae D39 0.02 1747233 1712504 S 1314 Streptococcus pyogenes 0.00 13876 0 S1 301452 Streptococcus pyogenes serotype M49 0.00 13876 13876 S2 471876 Streptococcus pyogenes NZ131 0.00 4885 4885 S1 1336746 Streptococcus pyogenes HSC5 0.00 3405 0 S1 404331 Streptococcus pyogenes serotype M4 0.00 3405 3405 S2 370554 Streptococcus pyogenes MGAS10750 0.00 2226 0 S1 404330 Streptococcus pyogenes serotype M2 0.00 2226 2226 S2 370552 Streptococcus pyogenes MGAS10270 0.00 2026 2 S1 301447 Streptococcus pyogenes serotype M1 0.00 1534 1534 S2 160490 Streptococcus pyogenes M1 GAS 0.00 336 336 S2 1207470 Streptococcus pyogenes M1 476 0.00 154 154 S2 293653 Streptococcus pyogenes MGAS5005 0.00 1783 0 S1 342023 Streptococcus pyogenes serotype M12 0.00 1201 1201 S2 1048264 Streptococcus pyogenes HKU QMH11M0907901 0.00 582 582 S2 370551 Streptococcus pyogenes MGAS9429 0.00 1581 0 S1 301450 Streptococcus pyogenes serotype M6 0.00 1581 1581 S2 286636 Streptococcus pyogenes MGAS10394 0.00 1075 0 S1 301451 Streptococcus pyogenes serotype M18 0.00 1075 1075 S2 186103 Streptococcus pyogenes MGAS8232 0.00 882 0 S1 301448 Streptococcus pyogenes serotype M3 0.00 550 550 S2 198466 Streptococcus pyogenes MGAS315 0.00 332 332 S2 193567 Streptococcus pyogenes SSI-1 0.00 541 0 S1 301449 Streptococcus pyogenes serotype M5 0.00 541 541 S2 160491 Streptococcus pyogenes str. Manfredo 0.00 520 0 S1 798299 Streptococcus pyogenes serotype M59 0.00 520 520 S2 798300 Streptococcus pyogenes MGAS15252 0.00 490 0 S1 487975 Streptococcus pyogenes serotype M53 0.00 490 490 S2 487215 Streptococcus pyogenes Alab49 0.00 370 370 S1 1437007 Streptococcus pyogenes STAB902 0.00 365 0 S1 319700 Streptococcus pyogenes serotype M28 0.00 365 365 S2 319701 Streptococcus pyogenes MGAS6180 0.00 363 363 S1 1010840 Streptococcus pyogenes MGAS1882 0.00 185 185 S1 1235829 Streptococcus pyogenes A20 0.00 122 122 S1 1150773 Streptococcus pyogenes JRS4 0.00 34 34 S1 1437008 Streptococcus pyogenes STAB1102 0.02 1706805 1706718 S 1302 Streptococcus gordonii 0.00 87 0 S1 29390 Streptococcus gordonii str. Challis 0.00 87 87 S2 467705 Streptococcus gordonii str. Challis substr. CH1 0.02 1670431 99804 G1 671232 Streptococcus anginosus group 0.01 753893 645117 S 1338 Streptococcus intermedius 0.00 54784 54784 S1 862967 Streptococcus intermedius B196 0.00 53978 53978 S1 862966 Streptococcus intermedius C270 0.00 14 14 S1 591365 Streptococcus intermedius JTH08 0.01 699873 611369 S 1328 Streptococcus anginosus 0.00 38010 38010 S1 862971 Streptococcus anginosus C238 0.00 26190 0 S1 1272910 Streptococcus anginosus subsp. whileyi 0.00 26190 26190 S2 1353243 Streptococcus anginosus subsp. whileyi MAS624 0.00 22298 22298 S1 862970 Streptococcus anginosus C1051 0.00 2006 2006 S1 1671923 Streptococcus anginosus subsp. anginosus 0.00 116861 0 S 76860 Streptococcus constellatus 0.00 116861 97626 S1 184250 Streptococcus constellatus subsp. pharyngis 0.00 19003 19003 S2 862969 Streptococcus constellatus subsp. pharyngis C1050 0.00 149 149 S2 696216 Streptococcus constellatus subsp. pharyngis C232 0.00 83 83 S2 862968 Streptococcus constellatus subsp. pharyngis C818 0.02 1492401 490316 S 1303 Streptococcus oralis 0.00 263484 263484 S1 1891914 Streptococcus oralis subsp. oralis 0.00 257244 257244 S1 1458253 Streptococcus oralis subsp. dentisani 0.00 205421 205421 S1 1077464 Streptococcus oralis subsp. tigurinus 0.00 173388 173388 S1 927666 Streptococcus oralis Uo5 0.00 102548 102548 S1 655813 Streptococcus oralis ATCC 35037 0.02 1467139 1307400 S 1304 Streptococcus salivarius 0.00 87357 87357 S1 347253 Streptococcus salivarius JIM8777 0.00 72382 72382 S1 1048332 Streptococcus salivarius CCHSS3 0.02 1420347 1223728 S 28037 Streptococcus mitis 0.00 195989 195989 S1 365659 Streptococcus mitis B6 0.00 630 630 S1 246201 Streptococcus mitis NCTC 12261 0.02 1403125 1293083 S 1308 Streptococcus thermophilus 0.00 23690 23690 S1 1433289 Streptococcus thermophilus M17PTZA496 0.00 14404 14404 S1 1433288 Streptococcus thermophilus MTH17CL396 0.00 14385 14385 S1 1435981 Streptococcus thermophilus 1F8CT 0.00 13075 13075 S1 1436725 Streptococcus thermophilus TH1477 0.00 11146 11146 S1 1051074 Streptococcus thermophilus JIM 8232 0.00 10624 10624 S1 1435972 Streptococcus thermophilus TH985 0.00 8793 8793 S1 1435974 Streptococcus thermophilus TH982 0.00 3709 3709 S1 1423145 Streptococcus thermophilus TH1436 0.00 3464 3464 S1 322159 Streptococcus thermophilus LMD-9 0.00 2614 2614 S1 264199 Streptococcus thermophilus LMG 18311 0.00 2603 2603 S1 1415776 Streptococcus thermophilus TH1435 0.00 1004 1004 S1 299768 Streptococcus thermophilus CNRZ1066 0.00 244 244 S1 767463 Streptococcus thermophilus ND03 0.00 237 237 S1 1408178 Streptococcus thermophilus ASCC 1275 0.00 50 50 S1 1187956 Streptococcus thermophilus MN-ZLW-002 0.01 1200452 531014 S 45634 Streptococcus cristatus 0.01 665767 665767 S1 889201 Streptococcus cristatus ATCC 51100 0.00 3671 3671 S1 1302863 Streptococcus cristatus AS 1.3089 0.01 966690 889412 S 1309 Streptococcus mutans 0.00 32022 32022 S1 1155071 Streptococcus mutans LJ23 0.00 24563 24563 S1 511691 Streptococcus mutans NN2025 0.00 20492 20492 S1 1198676 Streptococcus mutans GS-5 0.00 110 110 S1 210007 Streptococcus mutans UA159 0.00 91 91 S1 1437447 Streptococcus mutans UA159-FR 0.01 942390 942390 S 1340 Streptococcus porcinus 0.01 891667 891667 S 1329 Streptococcus canis 0.01 861835 861835 S 82348 Streptococcus pluranimalium 0.01 836278 836278 S 361101 Streptococcus pseudoporcinus 0.01 828491 828491 S 1310 Streptococcus sobrinus 0.01 813518 597811 S 1348 Streptococcus parauberis 0.00 114717 114717 S1 873447 Streptococcus parauberis NCFD 2020 0.00 100990 100990 S1 936154 Streptococcus parauberis KCTC 11537 0.01 804117 759941 S 1349 Streptococcus uberis 0.00 44176 44176 S1 218495 Streptococcus uberis 0140J 0.01 723922 723922 S 400065 Streptococcus merionis 0.01 708041 611419 S 1311 Streptococcus agalactiae 0.00 59306 59306 S1 1309807 Streptococcus agalactiae ILRI005 0.00 28253 28253 S1 1427374 Streptococcus agalactiae CNCTC 10/84 0.00 4284 0 S1 216495 Streptococcus agalactiae serogroup III 0.00 4284 4284 S2 211110 Streptococcus agalactiae NEM316 0.00 2144 2144 S1 1309806 Streptococcus agalactiae 09mas018883 0.00 1286 0 S1 355315 Streptococcus agalactiae serogroup Ia 0.00 1286 1286 S2 205921 Streptococcus agalactiae A909 0.00 556 556 S1 342614 Streptococcus agalactiae 515 0.00 382 382 S1 1203670 Streptococcus agalactiae GD201008-001 0.00 270 270 S1 342616 Streptococcus agalactiae COH1 0.00 141 0 S1 216466 Streptococcus agalactiae serogroup V 0.00 141 141 S2 208435 Streptococcus agalactiae 2603V/R 0.01 703965 703965 S 1335 Streptococcus equinus 0.01 659770 502204 S 315405 Streptococcus gallolyticus 0.00 157566 53317 S1 53354 Streptococcus gallolyticus subsp. gallolyticus 0.00 46444 46444 S2 990317 Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 0.00 31490 31490 S2 637909 Streptococcus gallolyticus UCN34 0.00 26295 26295 S2 981539 Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 0.00 20 20 S2 1258574 Streptococcus gallolyticus subsp. gallolyticus DSM 16831 0.01 638055 638055 S 1811193 Streptococcus pantholopis 0.01 623731 623731 S 1814128 Streptococcus halotolerans 0.01 605212 605212 S 1341 Streptococcus ratti 0.01 602111 602111 S 1346 Streptococcus iniae 0.01 585141 585141 S 1326 Streptococcus acidominimus 0.01 584179 584179 S 1825069 Streptococcus marmotae 0.01 580546 580546 S 1888195 Streptococcus himalayensis 0.01 555722 555722 S 1345 Streptococcus ferus 0.01 551486 551486 S 2021971 Streptococcus respiraculi 0.01 545139 545139 S 149016 Streptococcus urinalis 0.01 539282 152520 S 1318 Streptococcus parasanguinis 0.00 195847 195847 S1 760570 Streptococcus parasanguinis ATCC 15912 0.00 190915 190915 S1 1114965 Streptococcus parasanguinis FW213 0.01 530934 530934 S 113107 Streptococcus australis 0.00 378023 378023 S 1111760 Streptococcus troglodytae 0.00 245826 245826 S 1343 Streptococcus vestibularis 0.00 230897 0 S 257758 Streptococcus pseudopneumoniae 0.00 230897 230897 S1 1054460 Streptococcus pseudopneumoniae IS7493 0.00 216717 216717 S 1433513 Streptococcus gwangjuense 0.00 199116 27029 S 102684 Streptococcus infantarius 0.00 172087 0 S1 150054 Streptococcus infantarius subsp. infantarius 0.00 172087 172087 S2 1069533 Streptococcus infantarius subsp. infantarius CJ18 0.00 183319 183319 S 33040 Streptococcus milleri 0.00 161115 128251 S 150055 Streptococcus lutetiensis 0.00 32864 32864 S1 1076934 Streptococcus lutetiensis 033 0.00 151193 151193 S 2382163 Streptococcus koreensis 0.00 120745 101567 S 197614 Streptococcus pasteurianus 0.00 19178 19178 S1 981540 Streptococcus pasteurianus ATCC 43144 0.00 114100 114100 S 1917441 Streptococcus ruminantium 0.00 111315 111315 S 2490633 Streptococcus periodonticum 0.00 47995 0 S 59310 Streptococcus macedonicus 0.00 47995 47995 S1 1116231 Streptococcus macedonicus ACA-DC 198 0.00 1770 1770 S 68892 Streptococcus infantis 0.00 63 63 S 78535 Streptococcus viridans 0.11 9773998 300047 G 1357 Lactococcus 0.04 4024011 1490631 S 1358 Lactococcus lactis 0.01 1306378 1066655 S1 1359 Lactococcus lactis subsp. cremoris 0.00 116147 116147 S2 1295826 Lactococcus lactis subsp. cremoris KW2 0.00 77269 77269 S2 1449093 Lactococcus lactis subsp. cremoris IBB477 0.00 40359 40359 S2 1104322 Lactococcus lactis subsp. cremoris A76 0.00 3271 3271 S2 272622 Lactococcus lactis subsp. cremoris SK11 0.00 2078 2078 S2 1111678 Lactococcus lactis subsp. cremoris UC509.9 0.00 457 457 S2 416870 Lactococcus lactis subsp. cremoris MG1363 0.00 142 142 S2 746361 Lactococcus lactis subsp. cremoris NZ9000 0.01 1227002 1018215 S1 1360 Lactococcus lactis subsp. lactis 0.00 127994 127994 S2 1046624 Lactococcus lactis subsp. lactis IO-1 0.00 34852 34852 S2 44688 Lactococcus lactis subsp. lactis bv. diacetylactis 0.00 17454 17454 S2 929102 Lactococcus lactis subsp. lactis CV56 0.00 17375 17375 S2 684738 Lactococcus lactis subsp. lactis KF147 0.00 9388 9388 S2 1117941 Lactococcus lactis subsp. lactis NCDO 2118 0.00 1225 1225 S2 272623 Lactococcus lactis subsp. lactis Il1403 0.00 499 499 S2 889971 Lactococcus lactis subsp. lactis K214 0.02 1531110 1160000 S 1364 Lactococcus piscium 0.00 371110 371110 S1 297352 Lactococcus piscium MKFS47 0.02 1409149 196153 G1 2643510 unclassified Lactococcus 0.01 624279 624279 S 2419773 Lactococcus sp. 1JSPR-7 0.01 588717 588717 S 2592653 Lactococcus sp. KACC 19320 0.01 1273557 1273557 S 1366 Lactococcus raffinolactis 0.01 861325 859257 S 1363 Lactococcus garvieae 0.00 1999 1999 S1 420889 Lactococcus garvieae ATCC 49156 0.00 69 69 S1 420890 Lactococcus garvieae Lg2 0.00 374799 374799 S 1940789 Lactococcus petauri 0.36 32217893 41624 F 81852 Enterococcaceae 0.27 23957453 3469295 G 1350 Enterococcus 0.03 3074216 2924675 S 1351 Enterococcus faecalis 0.00 42993 42993 S1 699186 Enterococcus faecalis R712 0.00 40283 40283 S1 1206105 Enterococcus faecalis D32 0.00 37738 37738 S1 565651 Enterococcus faecalis ARO1/DG 0.00 13457 13457 S1 1201292 Enterococcus faecalis ATCC 29212 0.00 10125 10125 S1 1287066 Enterococcus faecalis DENG1 0.00 2566 2566 S1 226185 Enterococcus faecalis V583 0.00 2194 2194 S1 1157365 Enterococcus faecalis EnGen0107 0.00 185 185 S1 474186 Enterococcus faecalis OG1RF 0.03 2719054 2638547 S 1352 Enterococcus faecium 0.00 28419 28419 S1 565663 Enterococcus faecium Com15 0.00 26245 26245 S1 333849 Enterococcus faecium DO 0.00 21537 21537 S1 1158600 Enterococcus faecium ATCC 8459 = NRRL B-2354 0.00 3921 3921 S1 1305849 Enterococcus faecium Aus0085 0.00 385 385 S1 1344042 Enterococcus faecium T110 0.03 2707839 2707839 S 33945 Enterococcus avium 0.02 2057199 1973727 S 53346 Enterococcus mundtii 0.00 83472 83472 S1 1300150 Enterococcus mundtii QU 25 0.02 1544636 1505853 S 1354 Enterococcus hirae 0.00 38783 38783 S1 768486 Enterococcus hirae ATCC 9790 0.02 1430117 1430117 S 53345 Enterococcus durans 0.01 1176211 1176211 S 2005703 Enterococcus wangshanyuanii 0.01 1126320 1126320 S 160453 Enterococcus gilvus 0.01 1071898 53398 G1 2608891 unclassified Enterococcus 0.00 356312 356312 S 2060307 Enterococcus sp. FDAARGOS_375 0.00 271058 271058 S 2582830 Enterococcus sp. M190262 0.00 250904 250904 S 2057791 Enterococcus sp. CR-Ec1 0.00 53876 53876 S 2420313 Enterococcus sp. FDAARGOS_553 0.00 50690 50690 S 1316414 Enterococcus sp. HSIEG1 0.00 35660 35660 S 2603296 Enterococcus sp. DA9 0.01 919508 711137 S 37734 Enterococcus casseliflavus 0.00 208371 208371 S1 565655 Enterococcus casseliflavus EC20 0.01 881718 881718 S 44008 Enterococcus cecorum 0.01 768243 768243 S 1805431 Enterococcus saigonensis 0.01 741791 741791 S 417368 Enterococcus thailandicus 0.00 269408 269408 S 1353 Enterococcus gallinarum 0.05 4732791 14039 G 2737 Vagococcus 0.03 2546126 17717 G1 2648499 unclassified Vagococcus 0.01 874675 874675 S 2714947 Vagococcus sp. HDW17B 0.01 625381 625381 S 2571750 Vagococcus sp. MN-17 0.01 576104 576104 S 2562451 Vagococcus sp. CF-49 0.01 452249 452249 S 2714946 Vagococcus sp. HDW17A 0.01 872605 872605 S 218144 Vagococcus carniphilus 0.01 674405 674405 S 633807 Vagococcus penaei 0.01 625616 625616 S 519472 Vagococcus teuberi 0.03 2816254 68470 G 51668 Tetragenococcus 0.02 1400905 1265479 S 51669 Tetragenococcus halophilus 0.00 135221 135221 S1 945021 Tetragenococcus halophilus NBRC 12172 0.00 205 205 S1 1004777 Tetragenococcus halophilus HO 0.01 742257 742257 S 290335 Tetragenococcus koreensis 0.01 604251 604251 S 526944 Tetragenococcus osmophilus 0.00 371 371 S 64642 Tetragenococcus muriaticus 0.01 669771 0 G 33969 Melissococcus 0.01 669771 666224 S 33970 Melissococcus plutonius 0.00 1799 1799 S1 940190 Melissococcus plutonius ATCC 35311 0.00 893 893 S1 1090974 Melissococcus plutonius DAT561 0.00 855 855 S1 1385937 Melissococcus plutonius S1 0.21 19001664 27338 F 81850 Leuconostocaceae 0.10 9020859 110206 G 46255 Weissella 0.02 1823951 1823951 S 137591 Weissella cibaria 0.02 1480003 1480003 S 1583 Weissella confusa 0.01 923672 923672 S 2506420 Weissella cryptocerci 0.01 648866 648866 S 155866 Weissella soli 0.01 625078 625078 S 46256 Weissella hellenica 0.01 602623 602623 S 1631871 Weissella jogaejeotgali 0.01 552737 552737 S 1249 Weissella paramesenteroides 0.01 519386 435166 S 165096 Weissella koreensis 0.00 84220 84220 S1 1045854 Weissella koreensis KACC 15510 0.01 507725 507725 S 1162633 Weissella diestrammenae 0.01 471580 0 G1 2683241 unclassified Weissella 0.01 471580 471580 S 2714949 Weissella sp. HDW19 0.00 439305 439305 S 759620 Weissella ceti 0.00 315727 315727 S 1629 Weissella viridescens 0.08 7528073 1408869 G 1243 Leuconostoc 0.02 1520131 1222399 S 1245 Leuconostoc mesenteroides 0.00 237451 205449 S1 33967 Leuconostoc mesenteroides subsp. mesenteroides 0.00 31974 31974 S2 203120 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 0.00 28 28 S2 1107880 Leuconostoc mesenteroides subsp. mesenteroides J18 0.00 36280 36280 S1 33966 Leuconostoc mesenteroides subsp. dextranicum 0.00 14829 14829 S1 2026657 Leuconostoc mesenteroides subsp. jonggajibkimchii 0.00 9172 9172 S1 427140 Leuconostoc mesenteroides KFRI-MG 0.01 1228837 480916 S 1244 Leuconostoc gelidum 0.01 519890 381022 S1 115778 Leuconostoc gelidum subsp. gasicomitatum 0.00 138868 138868 S2 1165892 Leuconostoc gelidum subsp. gasicomitatum KG16-1 0.00 121375 121375 S1 1607839 Leuconostoc gelidum subsp. gelidum 0.00 106656 106656 S1 1229756 Leuconostoc gelidum JB7 0.01 865660 833827 S 33964 Leuconostoc citreum 0.00 31833 31833 S1 349519 Leuconostoc citreum KM20 0.01 785103 785103 S 1246 Leuconostoc lactis 0.01 625471 625471 S 33968 Leuconostoc pseudomesenteroides 0.01 526870 484738 S 1252 Leuconostoc carnosum 0.00 42132 42132 S1 1229758 Leuconostoc carnosum JB16 0.00 360903 360903 S 1511761 Leuconostoc suionicum 0.00 95484 35464 S 136609 Leuconostoc kimchii 0.00 60020 60020 S1 762051 Leuconostoc kimchii IMSNU 11154 0.00 79705 79705 S 255248 Leuconostoc garlicum 0.00 31040 0 G1 2685106 unclassified Leuconostoc 0.00 31040 31040 S 979982 Leuconostoc sp. C2 0.03 2425394 75915 G 46254 Oenococcus 0.01 769426 751398 S 1247 Oenococcus oeni 0.00 18028 18028 S1 203123 Oenococcus oeni PSU-1 0.01 556776 0 S 336988 Oenococcus kitaharae 0.01 556776 556776 S1 1045004 Oenococcus kitaharae DSM 17330 0.01 521040 0 G1 2636988 unclassified Oenococcus 0.01 521040 521040 S 2259623 Oenococcus sp. UCMA 16435 0.01 502237 502237 S 2203724 Oenococcus sicerae 0.11 10094308 4267 F 186828 Carnobacteriaceae 0.06 5209516 40106 G 2747 Carnobacterium 0.02 1687006 1570712 S 2751 Carnobacterium maltaromaticum 0.00 116294 116294 S1 1234679 Carnobacterium maltaromaticum LMA28 0.02 1505470 1633 G1 257487 unclassified Carnobacterium 0.01 754184 754184 S 208596 Carnobacterium sp. 17-4 0.01 749653 749653 S 1564681 Carnobacterium sp. CP1 0.01 1291893 1291893 S 2748 Carnobacterium divergens 0.01 685041 0 S 147709 Carnobacterium inhibens 0.01 685041 685041 S1 1266845 Carnobacterium inhibens subsp. gilichinskyi 0.03 3104970 392982 G 1470540 Jeotgalibaca 0.01 819846 819846 S 2496265 Jeotgalibaca ciconiae 0.01 684612 684612 S 1868793 Jeotgalibaca porci 0.01 618558 618558 S 708126 Jeotgalibaca dankookensis 0.00 305097 305097 S 1868794 Jeotgalibaca arthritidis 0.00 283875 0 G1 2621505 unclassified Jeotgalibaca 0.00 283875 283875 S 1903686 Jeotgalibaca sp. PTS2502 0.01 992058 0 G 29393 Dolosigranulum 0.01 992058 992058 S 29394 Dolosigranulum pigrum 0.01 783497 0 G 191769 Marinilactibacillus 0.01 783497 0 G1 2632303 unclassified Marinilactibacillus 0.01 783497 783497 S 1911586 Marinilactibacillus sp. 15R 0.06 5350959 468 F 186827 Aerococcaceae 0.04 3955512 201494 G 1375 Aerococcus 0.01 1082795 614165 S 1376 Aerococcus urinae 0.01 468630 468630 S1 866775 Aerococcus urinae ACS-120-V-Col10a 0.01 631015 631015 S 119206 Aerococcus sanguinicola 0.01 582361 582361 S 51665 Aerococcus urinaeequi 0.01 562338 562338 S 128944 Aerococcus urinaehominis 0.01 476250 476250 S 87541 Aerococcus christensenii 0.00 419259 419259 S 1377 Aerococcus viridans 0.01 753716 0 G 2689587 Suicoccus 0.01 753716 753716 S 2036206 Suicoccus acidiformans 0.01 641263 0 G 46123 Abiotrophia 0.01 641263 641263 S 46125 Abiotrophia defectiva 2.80 252986145 92994 C 186801 Clostridia 2.48 223591972 3670915 O 186802 Clostridiales 0.84 75436256 54947 F 31979 Clostridiaceae 0.72 64610028 5461613 G 1485 Clostridium 0.12 10474553 16252 G1 2614128 unclassified Clostridium 0.02 1817284 1817284 S 2320868 Clostridium sp. CT4 0.02 1742465 1742465 S 641107 Clostridium sp. DL-VIII 0.01 1351560 1351560 S 755731 Clostridium sp. BNL1100 0.01 1125858 1125858 S 2587161 Clostridium sp. SYSU GA15002T 0.01 921853 921853 S 2212991 Clostridium sp. AWRP 0.01 882459 882459 S 2507159 Clostridium sp. JN-9 0.01 872967 872967 S 1042156 Clostridium sp. SY8519 0.01 773263 773263 S 2068654 Clostridium sp. JN500901 0.01 771583 771583 S 2483110 Clostridium sp. JN-1 0.00 198215 198215 S 1702238 Clostridium sp. MF28 0.00 794 794 S 48257 Clostridium sp. MCF-1 0.09 8543404 6306298 S 1491 Clostridium botulinum 0.01 717381 717381 S1 929506 Clostridium botulinum BKT015925 0.01 488670 4 S1 36827 Clostridium botulinum B 0.00 353688 353688 S2 935198 Clostridium botulinum B str. Eklund 17B (NRP) 0.00 133025 0 S2 591968 Clostridium botulinum B1 0.00 133025 133025 S3 498213 Clostridium botulinum B1 str. Okra 0.00 1953 1953 S2 515621 Clostridium botulinum Ba4 str. 657 0.00 371542 371542 S1 1415774 Clostridium botulinum 202F 0.00 306675 781 S1 36826 Clostridium botulinum A 0.00 293689 293689 S2 498214 Clostridium botulinum A3 str. Loch Maree 0.00 9742 9742 S2 441770 Clostridium botulinum A str. ATCC 19397 0.00 1893 1893 S2 536232 Clostridium botulinum A2 str. Kyoto 0.00 541 541 S2 441771 Clostridium botulinum A str. Hall 0.00 29 29 S2 413999 Clostridium botulinum A str. ATCC 3502 0.00 129322 125850 S1 36831 Clostridium botulinum F 0.00 2893 2893 S2 758678 Clostridium botulinum F str. 230613 0.00 579 579 S2 441772 Clostridium botulinum F str. Langeland 0.00 92883 92883 S1 1408284 Clostridium botulinum Prevot_594 0.00 88045 88045 S1 941968 Clostridium botulinum H04402 065 0.00 32517 32517 S1 1408283 Clostridium botulinum CDC_1436 0.00 10071 0 S1 36830 Clostridium botulinum E 0.00 10071 10071 S2 508767 Clostridium botulinum E3 str. Alaska E43 0.05 4264889 4077377 S 1502 Clostridium perfringens 0.00 86500 86500 S1 883064 Clostridium perfringens F262 0.00 55506 55506 S1 195102 Clostridium perfringens str. 13 0.00 40860 40860 S1 195103 Clostridium perfringens ATCC 13124 0.00 4646 0 S1 451753 Clostridium perfringens CPE 0.00 4646 4646 S2 451756 Clostridium perfringens CPE str. F4969 0.03 2780756 2524963 S 1520 Clostridium beijerinckii 0.00 255255 255255 S1 1428454 Clostridium beijerinckii NRRL B-598 0.00 313 313 S1 290402 Clostridium beijerinckii NCIMB 8052 0.00 225 225 S1 864803 Clostridium beijerinckii ATCC 35702 0.03 2560926 1182385 S 1501 Clostridium pasteurianum 0.02 1377851 1377851 S1 86416 Clostridium pasteurianum BC1 0.00 690 690 S1 1262449 Clostridium pasteurianum DSM 525 = ATCC 6013 0.03 2411613 1708224 S 36745 Clostridium saccharoperbutylacetonicum 0.01 703389 0 S1 1335640 Clostridium saccharoperbutylacetonicum N1-4 0.01 703389 703389 S2 931276 Clostridium saccharoperbutylacetonicum N1-4(HMT) 0.03 2407056 2407056 S 1492 Clostridium butyricum 0.02 1983090 1977241 S 1534 Clostridium kluyveri 0.00 5619 5619 S1 431943 Clostridium kluyveri DSM 555 0.00 230 230 S1 583346 Clostridium kluyveri NBRC 12016 0.02 1542332 0 S 1493 Clostridium cellulovorans 0.02 1542332 1542332 S1 573061 Clostridium cellulovorans 743B 0.02 1480257 1480168 S 169679 Clostridium saccharobutylicum 0.00 89 89 S1 1345695 Clostridium saccharobutylicum DSM 13864 0.02 1391601 1391601 S 36845 Clostridium intestinale 0.02 1380509 863749 S 1561 Clostridium baratii 0.01 516760 516760 S1 1415775 Clostridium baratii str. Sullivan 0.02 1366074 0 S 238834 Clostridium estertheticum 0.02 1366074 1366074 S1 1552 Clostridium estertheticum subsp. estertheticum 0.01 1310729 1310729 S 29341 Clostridium argentinense 0.01 1296369 1296369 S 1497 Clostridium formicaceticum 0.01 1233529 0 S 217159 Clostridium carboxidivorans 0.01 1233529 1233529 S1 536227 Clostridium carboxidivorans P7 0.01 1220799 854108 S 1513 Clostridium tetani 0.00 325237 325237 S1 1231072 Clostridium tetani 12124569 0.00 41454 41454 S1 212717 Clostridium tetani E88 0.01 1210818 1210818 S 84022 Clostridium aceticum 0.01 1192597 1186944 S 1488 Clostridium acetobutylicum 0.00 3167 3167 S1 991791 Clostridium acetobutylicum DSM 1731 0.00 1362 1362 S1 272562 Clostridium acetobutylicum ATCC 824 0.00 1124 1124 S1 863638 Clostridium acetobutylicum EA 2018 0.01 1149850 501185 S 1542 Clostridium novyi 0.01 648665 648665 S1 386415 Clostridium novyi NT 0.01 1002629 1002629 S 1216932 Clostridium bornimense 0.01 888552 888552 S 1504 Clostridium septicum 0.01 864499 864499 S 1519 Clostridium tyrobutyricum 0.01 818050 818050 S 1548 Clostridium scatologenes 0.01 816213 816213 S 394958 Clostridium taeniosporum 0.01 790509 790509 S 332101 Clostridium drakei 0.01 758788 758788 S 182773 Clostridium isatidis 0.01 725700 725497 S 46867 Clostridium chauvoei 0.00 203 203 S1 1351755 Clostridium chauvoei JF4335 0.01 577696 577696 S 1494 Clostridium cochlearium 0.00 251775 0 S 1538 Clostridium ljungdahlii 0.00 251775 251775 S1 748727 Clostridium ljungdahlii DSM 13528 0.00 192296 0 S 84023 Clostridium autoethanogenum 0.00 192296 192296 S1 1341692 Clostridium autoethanogenum DSM 10061 0.00 161113 161113 S 223919 Clostridium diolis 0.00 98844 98844 S 1509 Clostridium sporogenes 0.03 2395257 295 G 114627 Alkaliphilus 0.02 1449158 0 S 208226 Alkaliphilus metalliredigens 0.02 1449158 1449158 S1 293826 Alkaliphilus metalliredigens QYMF 0.01 945804 0 S 461876 Alkaliphilus oremlandii 0.01 945804 945804 S1 350688 Alkaliphilus oremlandii OhILAs 0.02 1789407 0 G 1649459 Hungatella 0.02 1789407 0 S 154046 Hungatella hathewayi 0.02 1789407 1789407 S1 742737 Hungatella hathewayi WAL-18680 0.02 1756770 0 G 390805 Geosporobacter 0.02 1756770 1756770 S 1424294 Geosporobacter ferrireducens 0.01 932652 0 G 49082 Candidatus Arthromitus 0.01 932652 415763 G1 2638829 unclassified Candidatus Arthromitus 0.00 413239 413239 S 1041504 Candidatus Arthromitus sp. SFB-rat-Yit 0.00 53522 34811 S 49118 Candidatus Arthromitus sp. SFB-mouse 0.00 13003 13003 S1 1029718 Candidatus Arthromitus sp. SFB-mouse-Japan 0.00 5708 5708 S1 1041809 Candidatus Arthromitus sp. SFB-mouse-Yit 0.00 50128 50128 S 1508644 Candidatus Arthromitus sp. SFB-mouse-NL 0.01 838544 0 G 1848399 Crassaminicella 0.01 838544 0 G1 2633479 unclassified Crassaminicella 0.01 838544 838544 S 2599308 Crassaminicella sp. SY095 0.01 823676 0 G 44258 Caloramator 0.01 823676 0 G1 2629145 unclassified Caloramator 0.01 823676 823676 S 2576307 Caloramator sp. E03 0.01 797239 0 F1 189971 unclassified Clostridiaceae 0.01 797239 797239 S 2082193 Clostridiaceae bacterium 14S0207 0.01 740206 0 G 1769729 Hathewaya 0.01 740206 740206 S 1498 Hathewaya histolytica 0.01 690192 0 G 171003 Caloranaerobacter 0.01 690192 690192 S 116090 Caloranaerobacter azorensis 0.00 7338 0 G 580596 Butyricicoccus 0.00 7338 0 G1 2633649 unclassified Butyricicoccus 0.00 7338 7338 S 2109686 Butyricicoccus sp. GAM44 0.55 49976639 2135689 F 186803 Lachnospiraceae 0.07 6554765 1601146 G 572511 Blautia 0.03 2948901 2948796 S 33035 Blautia producta 0.00 105 105 S1 1121114 Blautia producta ATCC 27340 = DSM 2950 0.02 2004651 303 G1 2648079 unclassified Blautia 0.01 1050878 1050878 S 2479767 Blautia sp. SC05B48 0.01 953374 953374 S 1912897 Blautia sp. N6H1-15 0.00 96 96 S 1796616 Blautia sp. YL58 0.00 55 55 S 1532 Blautia coccoides 0.00 12 0 S 1322 Blautia hansenii 0.00 12 12 S1 537007 Blautia hansenii DSM 20583 0.07 6176788 5363 G 1506553 Lachnoclostridium 0.02 1480120 0 S 66219 Lachnoclostridium phytofermentans 0.02 1480120 1480120 S1 357809 Lachnoclostridium phytofermentans ISDg 0.02 1356527 1091809 S 29347 [Clostridium] scindens 0.00 264718 264718 S1 411468 [Clostridium] scindens ATCC 35704 0.01 1195953 0 S 89153 [Clostridium] hylemonae 0.01 1195953 1195953 S1 553973 [Clostridium] hylemonae DSM 15053 0.01 1101766 0 G1 2608895 unclassified Lachnoclostridium 0.01 1101766 1101766 S 1834196 Lachnoclostridium sp. YL32 0.01 1037059 1037059 S 1871021 Lachnoclostridium phocaeense 0.07 5950343 1004781 F1 186928 unclassified Lachnospiraceae 0.02 1389270 1389270 S 2093742 Lachnospiraceae bacterium KM106-2 0.01 1156906 1156906 S 2109691 Lachnospiraceae bacterium GAM79 0.01 936665 936665 S 712991 Lachnospiraceae bacterium oral taxon 500 0.01 804675 804675 S 2109690 Lachnospiraceae bacterium Choco86 0.01 658046 658046 S 1898203 Lachnospiraceae bacterium 0.06 5085609 4642 G 1843210 Anaerocolumna 0.04 3424464 1763 G1 2642604 unclassified Anaerocolumna 0.02 1746896 1746896 S 2736602 Anaerocolumna sp. CTTW 0.02 1675805 1675805 S 2696063 Anaerocolumna sp. CBA3638 0.02 1656503 1656503 S 433286 Anaerocolumna cellulosilytica 0.04 3815847 21707 G 830 Butyrivibrio 0.02 1394517 1393816 S 831 Butyrivibrio fibrisolvens 0.00 701 701 S1 889972 Butyrivibrio fibrisolvens OB157 0.02 1356938 0 S 43305 Butyrivibrio proteoclasticus 0.02 1356938 1356938 S1 515622 Butyrivibrio proteoclasticus B316 0.01 1042685 1042685 S 185008 Butyrivibrio hungatei 0.04 3405892 62013 G 2719313 Enterocloster 0.03 2698525 2698525 S 208479 Enterocloster bolteae 0.01 645354 645354 S 1531 Enterocloster clostridioformis 0.03 3076264 32394 G 207244 Anaerostipes 0.01 1069512 1069512 S 1229621 Anaerostipes rhamnosivorans 0.01 1068923 1068923 S 105841 Anaerostipes caccae 0.01 905435 905435 S 649756 Anaerostipes hadrus 0.03 3041252 44821 G 2719231 Lacrimispora 0.02 1607491 0 S 29370 Lacrimispora sphenoides 0.02 1607491 1607491 S1 1297793 [Clostridium] sphenoides JCM 1415 0.02 1388940 0 S 84030 Lacrimispora saccharolytica 0.02 1388940 1388940 S1 610130 [Clostridium] saccharolyticum WM1 0.03 2261834 13896 G 841 Roseburia 0.01 1238546 0 S 166486 Roseburia intestinalis 0.01 1238546 1238546 S1 536231 Roseburia intestinalis L1-82 0.01 1009392 1009392 S 301301 Roseburia hominis 0.02 2024573 841691 G 698776 Cellulosilyticum 0.01 605868 0 G1 2643091 unclassified Cellulosilyticum 0.01 605868 605868 S 2497860 Cellulosilyticum sp. WCF-2 0.01 577014 0 S 29360 Cellulosilyticum lentocellum 0.01 577014 577014 S1 642492 Cellulosilyticum lentocellum DSM 5427 0.01 1088188 0 G 46205 Pseudobutyrivibrio 0.01 1088188 1088188 S 185007 Pseudobutyrivibrio xylanivorans 0.01 984648 0 G 2316020 Mediterraneibacter 0.01 984648 0 S 33038 [Ruminococcus] gnavus 0.01 984648 984648 S1 411470 [Ruminococcus] gnavus ATCC 29149 0.01 970727 0 G 2569097 Anaerobutyricum 0.01 970727 970727 S 39488 Anaerobutyricum hallii 0.01 948624 0 G 2039240 Anaerotignum 0.01 948624 0 S 28446 Anaerotignum propionicum 0.01 948624 948624 S1 991789 Anaerotignum propionicum DSM 1682 0.01 865131 0 G 28050 Lachnospira 0.01 865131 0 S 39485 Lachnospira eligens 0.01 865131 865131 S1 515620 [Eubacterium] eligens ATCC 27750 0.01 823248 0 G 1164882 Lachnoanaerobaculum 0.01 823248 823248 S 617123 Lachnoanaerobaculum umeaense 0.01 767217 0 G 1663717 Herbinix 0.01 767217 767217 S 1679721 Herbinix luporum 0.31 27994835 58774 F 186807 Peptococcaceae 0.07 6607670 42047 G 79206 Desulfosporosinus 0.02 1805531 0 S 1563 Desulfosporosinus orientis 0.02 1805531 1805531 S1 768706 Desulfosporosinus orientis DSM 765 0.02 1729122 0 S 339862 Desulfosporosinus youngiae 0.02 1729122 1729122 S1 768710 Desulfosporosinus youngiae DSM 17734 0.02 1536513 0 S 885581 Desulfosporosinus acidiphilus 0.02 1536513 1536513 S1 646529 Desulfosporosinus acidiphilus SJ4 0.02 1494457 0 S 79209 Desulfosporosinus meridiei 0.02 1494457 1494457 S1 768704 Desulfosporosinus meridiei DSM 13257 0.06 5664987 76251 G 36853 Desulfitobacterium 0.02 2220286 1094055 S 49338 Desulfitobacterium hafniense 0.01 626090 626090 S1 138119 Desulfitobacterium hafniense Y51 0.01 500141 500141 S1 272564 Desulfitobacterium hafniense DCB-2 0.01 1282774 0 S 36854 Desulfitobacterium dehalogenans 0.01 1282774 1282774 S1 756499 Desulfitobacterium dehalogenans ATCC 51507 0.01 1101141 0 S 233055 Desulfitobacterium dichloroeliminans 0.01 1101141 1101141 S1 871963 Desulfitobacterium dichloroeliminans LMG P-21439 0.01 984535 0 S 142877 Desulfitobacterium metallireducens 0.01 984535 984535 S1 871968 Desulfitobacterium metallireducens DSM 15288 0.05 4166389 23169 G 1562 Desulfotomaculum 0.01 1231461 0 S 1564 Desulfotomaculum ruminis 0.01 1231461 1231461 S1 696281 Desulfotomaculum ruminis DSM 2154 0.01 1094247 0 S 59610 Desulfotomaculum reducens 0.01 1094247 1094247 S1 349161 Desulfotomaculum reducens MI-1 0.01 956474 956474 S 1833852 Desulfotomaculum ferrireducens 0.01 861038 0 S 1565 Desulfotomaculum nigrificans 0.01 861038 861038 S1 868595 Desulfotomaculum nigrificans CO-1-SRB 0.02 1991251 0 F1 208050 unclassified Peptococcaceae 0.02 1991251 1991251 S 1761012 Peptococcaceae bacterium DCMF 0.02 1694903 395038 G 56112 Dehalobacter 0.01 717839 584239 S 55583 Dehalobacter restrictus 0.00 133600 133600 S1 871738 Dehalobacter restrictus DSM 9455 0.01 582026 500250 G1 2635733 unclassified Dehalobacter 0.00 42664 42664 S 1147129 Dehalobacter sp. DCA 0.00 39112 39112 S 1131462 Dehalobacter sp. CF 0.02 1482941 0 G 2282740 Desulfallas 0.02 1482941 0 S 102134 Desulfallas gibsoniae 0.02 1482941 1482941 S1 767817 Desulfallas gibsoniae DSM 7213 0.01 1345579 0 G 2282742 Desulfofarcimen 0.01 1345579 0 S 58138 Desulfofarcimen acetoxidans 0.01 1345579 1345579 S1 485916 Desulfofarcimen acetoxidans DSM 771 0.01 1149612 0 G 2651578 Thermoanaerosceptrum 0.01 1149612 1149612 S 1712410 Thermoanaerosceptrum fracticalcis 0.01 1115512 0 G 51514 Dehalobacterium 0.01 1115512 1115512 S 51515 Dehalobacterium formicoaceticum 0.01 1023434 0 G 51196 Syntrophobotulus 0.01 1023434 0 S 51197 Syntrophobotulus glycolicus 0.01 1023434 1023434 S1 645991 Syntrophobotulus glycolicus DSM 8271 0.01 968191 0 G 278993 Thermincola 0.01 968191 0 S 863643 Thermincola potens 0.01 968191 968191 S1 635013 Thermincola potens JR 0.01 725592 0 G 471826 Candidatus Desulforudis 0.01 725592 0 S 471827 Candidatus Desulforudis audaxviator 0.01 725592 725592 S1 477974 Candidatus Desulforudis audaxviator MP104C 0.16 14084252 22415 F 541000 Ruminococcaceae 0.04 3764423 5662 G 1263 Ruminococcus 0.01 1347237 0 S 1264 Ruminococcus albus 0.01 1347237 1347237 S1 697329 Ruminococcus albus 7 = DSM 20455 0.01 891970 891970 S 1160721 Ruminococcus bicirculans 0.01 800563 800563 S 1161942 Ruminococcus champanellensis 0.01 718439 0 G1 2608920 unclassified Ruminococcus 0.01 718439 718439 S 2564099 Ruminococcus sp. JE7A12 0.00 552 552 S 1265 Ruminococcus flavefaciens 0.03 2849238 0 G 216851 Faecalibacterium 0.03 2849238 2848914 S 853 Faecalibacterium prausnitzii 0.00 324 324 S1 411483 Faecalibacterium prausnitzii A2-165 0.02 2206611 0 G 1738645 Caproiciproducens 0.02 2206611 10835 G1 2643836 unclassified Caproiciproducens 0.01 1191268 1191268 S 2721621 Caproiciproducens sp. 7D4C2 0.01 1004508 1004508 S 2507162 Caproiciproducens sp. NJN-50 0.02 1596297 0 G 946234 Flavonifractor 0.02 1596297 1596297 S 292800 Flavonifractor plautii 0.01 1320015 0 G 1905344 Ruthenibacterium 0.01 1320015 1320015 S 1550024 Ruthenibacterium lactatiformans 0.01 942937 0 G 253238 Ethanoligenens 0.01 942937 942613 S 253239 Ethanoligenens harbinense 0.00 324 324 S1 663278 Ethanoligenens harbinense YUAN-3 0.01 692925 577442 F1 2305133 unclassified Ruminococcaceae 0.00 54949 54949 S 1572656 Ruminococcaceae bacterium CPB6 0.00 44301 44301 S 2666138 Ruminococcaceae bacterium LBM 19010 0.00 16233 16233 S 2675554 Ruminococcaceae bacterium LAM 19011 0.01 689178 0 F1 552397 Ruminococcaceae incertae sedis 0.01 689178 689178 S 29343 [Clostridium] cellulosi 0.00 213 0 G 1918385 Acutalibacter 0.00 213 213 S 1796620 Acutalibacter muris 0.12 10914972 58747 F 186804 Peptostreptococcaceae 0.04 3386971 0 G 1870884 Clostridioides 0.04 3386971 3313070 S 1496 Clostridioides difficile 0.00 22107 22107 S1 499175 Clostridioides difficile ATCC 43255 0.00 17563 17563 S1 479834 Clostridioides difficile QCD-37x79 0.00 12501 12501 S1 699035 Clostridioides difficile M120 0.00 9857 9857 S1 479831 Clostridioides difficile QCD-63q42 0.00 2628 2628 S1 699033 Clostridioides difficile 2007855 0.00 2243 2243 S1 699036 Clostridioides difficile CF5 0.00 1868 1868 S1 479832 Clostridioides difficile QCD-76w55 0.00 963 963 S1 499176 Clostridioides difficile CIP 107932 0.00 935 935 S1 479833 Clostridioides difficile QCD-97b34 0.00 920 920 S1 699037 Clostridioides difficile M68 0.00 903 903 S1 455631 Clostridioides difficile QCD-66c26 0.00 672 672 S1 699034 Clostridioides difficile BI1 0.00 340 340 S1 645462 Clostridioides difficile CD196 0.00 236 236 S1 272563 Clostridioides difficile 630 0.00 98 98 S1 645463 Clostridioides difficile R20291 0.00 67 67 S1 1121308 Clostridioides difficile ATCC 9689 = DSM 1296 0.02 2232877 15451 G 1501226 Romboutsia 0.01 802353 0 G1 2626894 unclassified Romboutsia 0.01 802353 802353 S 2724150 Romboutsia sp. CE17 0.01 769760 769760 S 1507512 Romboutsia hominis 0.01 645313 645313 S 1115758 Romboutsia ilealis 0.01 959001 0 G 1849828 Paeniclostridium 0.01 959001 959001 S 1505 Paeniclostridium sordellii 0.01 916560 0 G 1849822 Paraclostridium 0.01 916560 916560 S 1490 Paraclostridium bifermentans 0.01 897174 0 G 1481960 Peptoclostridium 0.01 897174 0 S 1731 Peptoclostridium acidaminophilum 0.01 897174 897174 S1 1286171 Peptoclostridium acidaminophilum DSM 3953 0.01 800706 0 G 186831 Acetoanaerobium 0.01 800706 800706 S 1511 Acetoanaerobium sticklandii 0.01 661957 0 G 2743582 Peptacetobacter 0.01 661957 661957 S 89152 Peptacetobacter hiranonis 0.01 528821 0 G 44259 Filifactor 0.01 528821 0 S 143361 Filifactor alocis 0.01 528821 528821 S1 546269 Filifactor alocis ATCC 35896 0.01 472158 0 F1 1411023 unclassified Peptostreptococcaceae 0.01 472158 472158 S 2081703 Peptostreptococcaceae bacterium oral taxon 929 0.12 10524049 292 O1 538999 Clostridiales incertae sedis 0.06 5119712 2261 F 543314 Clostridiales Family XIII. Incertae Sedis 0.03 2935988 6129 G 2060094 Aminipila 0.02 1896294 7544 G1 2623050 unclassified Aminipila 0.01 1062753 1062753 S 2697030 Aminipila sp. CBA3637 0.01 825997 825997 S 2507160 Aminipila sp. JN-18 0.01 1033565 1033565 S 433296 Aminipila butyrica 0.01 1084367 27231 G 86331 Mogibacterium 0.01 533472 533472 S 114527 Mogibacterium diversum 0.01 523664 523664 S 86332 Mogibacterium pumilum 0.01 558157 0 S 76124 [Eubacterium] minutum 0.01 558157 558157 S1 888721 Eubacterium minutum ATCC 700079 0.01 538939 0 S 143393 [Eubacterium] sulci 0.01 538939 538939 S1 888727 Eubacterium sulci ATCC 35585 0.03 2394811 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.03 2357779 65102 G 73918 Thermaerobacter 0.02 1535417 23858 G1 2619059 unclassified Thermaerobacter 0.01 759080 759080 S 2546351 Thermaerobacter sp. FW80 0.01 752479 752479 S 2293838 Thermaerobacter sp. PB12/4term 0.01 757260 0 S 73919 Thermaerobacter marianensis 0.01 757260 757260 S1 644966 Thermaerobacter marianensis DSM 12885 0.00 37032 0 G 28033 Sulfobacillus 0.00 37032 37032 S 338644 Sulfobacillus thermotolerans 0.01 930076 0 F 543347 Clostridiales Family XVI. Incertae Sedis 0.01 930076 0 G 178898 Carboxydocella 0.01 930076 930076 S 178899 Carboxydocella thermautotrophica 0.01 901416 0 G 1918454 Flintibacter 0.01 901416 0 G1 2610894 unclassified Flintibacter 0.01 901416 901416 S 2610895 Flintibacter sp. KGMB00164 0.01 826482 0 G 2717089 Massilistercora 0.01 826482 826482 S 2086584 Massilistercora timonensis 0.00 351260 0 G 1392389 Intestinimonas 0.00 351260 351260 S 1297617 Intestinimonas butyriciproducens 0.10 8670366 815 F 186806 Eubacteriaceae 0.07 6288243 1340372 G 1730 Eubacterium 0.02 1695859 1695859 S 1736 Eubacterium limosum 0.01 1111770 0 G1 2624479 unclassified Eubacterium 0.01 1111770 1111770 S 2764325 Eubacterium sp. NSJ-61 0.01 1019903 0 S 29322 [Eubacterium] cellulosolvens 0.01 1019903 1019903 S1 633697 [Eubacterium] cellulosolvens 6 0.01 755402 755402 S 53442 Eubacterium callanderi 0.00 364937 364937 S 2041044 Eubacterium maltosivorans 0.03 2381308 10397 G 33951 Acetobacterium 0.01 1189795 0 S 33952 Acetobacterium woodii 0.01 1189795 1189795 S1 931626 Acetobacterium woodii DSM 1030 0.01 1181116 0 G1 2638182 unclassified Acetobacterium 0.01 1181116 1181116 S 2184575 Acetobacterium sp. KB-1 0.09 8091541 21570 F 2304686 Hungateiclostridiaceae 0.04 3426218 24752 G 2304692 Hungateiclostridium 0.01 1334450 0 S 288965 Hungateiclostridium clariflavum 0.01 1334450 1334450 S1 720554 Hungateiclostridium clariflavum DSM 19732 0.01 1150751 1042168 S 1515 Hungateiclostridium thermocellum 0.00 107712 107712 S1 203119 Hungateiclostridium thermocellum ATCC 27405 0.00 436 436 S1 1138384 Hungateiclostridium thermocellum AD2 0.00 249 249 S1 637887 Hungateiclostridium thermocellum DSM 1313 0.00 186 186 S1 572545 Hungateiclostridium thermocellum DSM 2360 0.01 916265 916265 S 1677857 Hungateiclostridium saccincola 0.02 1393939 0 G 2304693 Pseudoclostridium 0.02 1393939 1393939 S 84032 Pseudoclostridium thermosuccinogenes 0.01 1140994 0 G 1508657 Ruminiclostridium 0.01 1140994 0 S 1521 Ruminiclostridium cellulolyticum 0.01 1140994 1140994 S1 394503 Ruminiclostridium cellulolyticum H10 0.01 1037904 0 G 2304691 Thermoclostridium 0.01 1037904 889481 S 1510 Thermoclostridium stercorarium 0.00 71242 0 S1 160385 Thermoclostridium stercorarium subsp. leptospartum 0.00 71242 71242 S2 1346611 Thermoclostridium stercorarium subsp. leptospartum DSM 9219 0.00 46905 0 S1 29351 Thermoclostridium stercorarium subsp. thermolacticum 0.00 46905 46905 S2 1121336 Thermoclostridium stercorarium subsp. thermolacticum DSM 2910 0.00 30276 0 S1 160845 Thermoclostridium stercorarium subsp. stercorarium 0.00 30276 30276 S2 1121335 Thermoclostridium stercorarium subsp. stercorarium DSM 8532 0.01 547793 0 G 1637257 Mageeibacillus 0.01 547793 0 S 884684 Mageeibacillus indolicus 0.01 547793 547793 S1 699246 Mageeibacillus indolicus UPII9-5 0.01 522883 0 G 236752 Fastidiosipila 0.01 522883 522883 S 236753 Fastidiosipila sanguinis 0.00 240 0 F1 2305130 unclassified Hungateiclostridiaceae 0.00 240 240 S 1834198 Hungateiclostridiaceae bacterium KB18 0.04 3453431 815809 F 216572 Oscillospiraceae 0.03 2390054 1365 G 459786 Oscillibacter 0.01 1329493 0 S 351091 Oscillibacter valericigenes 0.01 1329493 1329493 S1 693746 Oscillibacter valericigenes Sjm18-20 0.01 1059196 93 G1 2629304 unclassified Oscillibacter 0.01 872846 872846 S 2763056 Oscillibacter sp. NSJ-62 0.00 186257 186257 S 2109687 Oscillibacter sp. PEA192 0.00 247568 0 G 2591381 Dysosmobacter 0.00 247568 247568 S 2093857 Dysosmobacter welbionis 0.03 2768347 83 O1 39779 unclassified Clostridiales 0.02 1756467 1756467 S 1898207 Clostridiales bacterium 0.01 1009947 1009947 S 2109688 Clostridiales bacterium CCNA10 0.00 1850 1850 S 2109689 Clostridiales bacterium Choco116 0.03 2363969 310 F 68298 Syntrophomonadaceae 0.01 903988 0 G 862 Syntrophomonas 0.01 903988 0 S 863 Syntrophomonas wolfei 0.01 903988 0 S1 370885 Syntrophomonas wolfei subsp. wolfei 0.01 903988 903988 S2 335541 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 0.01 769726 0 G 129001 Syntrophothermus 0.01 769726 0 S 86170 Syntrophothermus lipocalidus 0.01 769726 769726 S1 643648 Syntrophothermus lipocalidus DSM 12680 0.01 689945 0 G 2293313 Candidatus Syntrophocurvum 0.01 689945 689945 S 2293317 Candidatus Syntrophocurvum alkaliphilum 0.02 1867342 274 F 31984 Heliobacteriaceae 0.01 980668 0 G 79598 Heliorestis 0.01 980668 980668 S 356322 Heliorestis convoluta 0.01 886400 0 G 2697 Heliobacterium 0.01 886400 0 S 35701 Heliobacterium modesticaldum 0.01 886400 886400 S1 498761 Heliobacterium modesticaldum Ice1 0.02 1648652 0 F 990719 Christensenellaceae 0.02 1648652 50 G 990721 Christensenella 0.01 905760 905760 S 626937 Christensenella minuta 0.01 742842 0 G1 2649046 unclassified Christensenella 0.01 742842 742842 S 2086585 Christensenella sp. Marseille-P3954 0.01 1070013 0 F 543349 Symbiobacteriaceae 0.01 1070013 0 G 2733 Symbiobacterium 0.01 1070013 0 S 2734 Symbiobacterium thermophilum 0.01 1070013 1070013 S1 292459 Symbiobacterium thermophilum IAM 14863 0.01 1056393 0 F 2603322 Vallitaleaceae 0.01 1056393 0 G 2603323 Petrocella 0.01 1056393 1056393 S 2173034 Petrocella atlantisensis 0.22 19951340 17301 O 68295 Thermoanaerobacterales 0.10 9393520 57552 F 186814 Thermoanaerobacteraceae 0.03 3130155 112 F1 42857 Moorella group 0.03 2470034 22159 G 44260 Moorella 0.02 1392977 1392219 S 1525 Moorella thermoacetica 0.00 758 758 S1 264732 Moorella thermoacetica ATCC 39073 0.01 1054898 1054898 S 55779 Moorella glycerini 0.01 660009 0 G 42837 Ammonifex 0.01 660009 0 S 42838 Ammonifex degensii 0.01 660009 660009 S1 429009 Ammonifex degensii KC4 0.03 2811158 1417140 G 1754 Thermoanaerobacter 0.01 478801 478801 S 2325 Thermoanaerobacter kivui 0.00 215403 0 S 46354 Thermoanaerobacter wiegelii 0.00 215403 215403 S1 697303 Thermoanaerobacter wiegelii Rt8.B1 0.00 193220 0 S 108150 Thermoanaerobacter italicus 0.00 193220 193220 S1 580331 Thermoanaerobacter italicus Ab9 0.00 167223 0 S 583357 Thermoanaerobacter mathranii 0.00 167223 0 S1 57481 Thermoanaerobacter mathranii subsp. mathranii 0.00 167223 167223 S2 583358 Thermoanaerobacter mathranii subsp. mathranii str. A3 0.00 117815 0 S 1757 Thermoanaerobacter ethanolicus 0.00 117815 117815 S1 509192 Thermoanaerobacter ethanolicus JW 200 0.00 112330 112041 G1 2636821 unclassified Thermoanaerobacter 0.00 200 200 S 399726 Thermoanaerobacter sp. X514 0.00 89 89 S 573062 Thermoanaerobacter sp. X513 0.00 108151 0 S 106578 Thermoanaerobacter siderophilus 0.00 108151 108151 S1 880478 Thermoanaerobacter siderophilus SR4 0.00 909 0 S 496866 Thermoanaerobacter pseudethanolicus 0.00 909 909 S1 340099 Thermoanaerobacter pseudethanolicus ATCC 33223 0.00 166 0 S 29323 Thermoanaerobacter brockii 0.00 166 0 S1 29325 Thermoanaerobacter brockii subsp. finnii 0.00 166 166 S2 509193 Thermoanaerobacter brockii subsp. finnii Ako-1 0.01 1065174 0 G 202949 Thermanaeromonas 0.01 1065174 0 S 161154 Thermanaeromonas toyohensis 0.01 1065174 1065174 S1 698762 Thermanaeromonas toyohensis ToBE 0.01 880926 0 G 140458 Thermacetogenium 0.01 880926 0 S 85874 Thermacetogenium phaeum 0.01 880926 880926 S1 1089553 Thermacetogenium phaeum DSM 12270 0.01 726128 0 G 129957 Carboxydothermus 0.01 726128 0 S 129958 Carboxydothermus hydrogenoformans 0.01 726128 726128 S1 246194 Carboxydothermus hydrogenoformans Z-2901 0.01 722427 0 G 249529 Caldanaerobacter 0.01 722427 0 S 911092 Caldanaerobacter subterraneus 0.01 722427 0 S1 119072 Caldanaerobacter subterraneus subsp. tengcongensis 0.01 722427 722427 S2 273068 Caldanaerobacter subterraneus subsp. tengcongensis MB4 0.09 8520070 433 F 543371 Thermoanaerobacterales Family III. Incertae Sedis 0.05 4836817 1601643 G 44000 Caldicellulosiruptor 0.01 475757 0 S 44001 Caldicellulosiruptor saccharolyticus 0.01 475757 475757 S1 351627 Caldicellulosiruptor saccharolyticus DSM 8903 0.00 445403 445403 S 1222016 Caldicellulosiruptor changbaiensis 0.00 438269 0 S 55205 Caldicellulosiruptor owensensis 0.00 438269 438269 S1 632518 Caldicellulosiruptor owensensis OL 0.00 429380 0 S 717609 Caldicellulosiruptor obsidiansis 0.00 429380 429380 S1 608506 Caldicellulosiruptor obsidiansis OB47 0.00 418300 0 S 413888 Caldicellulosiruptor hydrothermalis 0.00 418300 418300 S1 632292 Caldicellulosiruptor hydrothermalis 108 0.00 346315 0 S 413889 Caldicellulosiruptor kronotskyensis 0.00 346315 346315 S1 632348 Caldicellulosiruptor kronotskyensis 2002 0.00 306154 0 S 31899 Caldicellulosiruptor bescii 0.00 306154 306154 S1 521460 Caldicellulosiruptor bescii DSM 6725 0.00 214511 0 S 52765 Caldicellulosiruptor kristjanssonii 0.00 214511 214511 S1 632335 Caldicellulosiruptor kristjanssonii I77R1B 0.00 161085 0 S 52766 Caldicellulosiruptor lactoaceticus 0.00 161085 161085 S1 632516 Caldicellulosiruptor lactoaceticus 6A 0.04 3682820 242977 G 28895 Thermoanaerobacterium 0.01 1318897 810909 S 1517 Thermoanaerobacterium thermosaccharolyticum 0.00 280477 280477 S1 698948 Thermoanaerobacterium thermosaccharolyticum M0795 0.00 227511 227511 S1 580327 Thermoanaerobacterium thermosaccharolyticum DSM 571 0.01 893038 0 G1 2622527 unclassified Thermoanaerobacterium 0.01 893038 893038 S 1550240 Thermoanaerobacterium sp. RBIITD 0.01 642869 642869 S 47490 Thermoanaerobacterium aotearoense 0.01 585039 0 S 29329 Thermoanaerobacterium xylanolyticum 0.01 585039 585039 S1 858215 Thermoanaerobacterium xylanolyticum LX-11 0.01 1047707 0 F 227387 Thermodesulfobiaceae 0.01 1047707 25261 G 227388 Thermodesulfobium 0.01 526358 0 S 184064 Thermodesulfobium narugense 0.01 526358 526358 S1 747365 Thermodesulfobium narugense DSM 14796 0.01 496088 496088 S 1794699 Thermodesulfobium acidiphilum 0.01 972742 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.01 972742 0 G 252965 Mahella 0.01 972742 0 S 252966 Mahella australiensis 0.01 972742 972742 S1 697281 Mahella australiensis 50-1 BON 0.06 5838293 883 O 53433 Halanaerobiales 0.04 3301903 815 F 972 Halanaerobiaceae 0.01 1328286 2293 G 2330 Halanaerobium 0.01 720239 720239 S 656519 Halanaerobium hydrogeniformans 0.01 605754 0 S 2331 Halanaerobium praevalens 0.01 605754 605754 S1 572479 Halanaerobium praevalens DSM 2228 0.01 1197333 0 G 46466 Halocella 0.01 1197333 0 G1 2640322 unclassified Halocella 0.01 1197333 1197333 S 2382161 Halocella sp. SP3-1 0.01 775469 0 G 32636 Halothermothrix 0.01 775469 0 S 31909 Halothermothrix orenii 0.01 775469 775469 S1 373903 Halothermothrix orenii H 168 0.02 1520384 390 F 53434 Halobacteroidaceae 0.01 777114 0 G 42417 Halobacteroides 0.01 777114 0 S 42422 Halobacteroides halobius 0.01 777114 777114 S1 748449 Halobacteroides halobius DSM 5150 0.01 742880 0 G 28186 Acetohalobium 0.01 742880 0 S 28187 Acetohalobium arabaticum 0.01 742880 742880 S1 574087 Acetohalobium arabaticum DSM 5501 0.01 1015123 0 O1 387655 Halanaerobiales incertae sedis 0.01 1015123 0 G 1769008 Anoxybacter 0.01 1015123 1015123 S 1323375 Anoxybacter fermentans 0.03 2555804 525 O 2770089 Thermosediminibacterales 0.02 1880851 311 F 2770092 Tepidanaerobacteraceae 0.01 1043021 0 G 2770094 Biomaibacter 0.01 1043021 1043021 S 2316383 Biomaibacter acetigenes 0.01 837519 0 G 499228 Tepidanaerobacter 0.01 837519 0 S 499229 Tepidanaerobacter acetatoxydans 0.01 837519 837519 S1 1209989 Tepidanaerobacter acetatoxydans Re1 0.01 674428 0 F 2770093 Thermosediminibacteraceae 0.01 674428 0 G 291988 Thermosediminibacter 0.01 674428 0 S 291990 Thermosediminibacter oceani 0.01 674428 674428 S1 555079 Thermosediminibacter oceani DSM 16646 0.01 955742 0 O 485256 Natranaerobiales 0.01 955742 0 F 485255 Natranaerobiaceae 0.01 955742 0 G 375928 Natranaerobius 0.01 955742 0 S 375929 Natranaerobius thermophilus 0.01 955742 955742 S1 457570 Natranaerobius thermophilus JW/NM-WN-LF 0.26 23241406 7133 C 909932 Negativicutes 0.15 13718941 627 O 909929 Selenomonadales 0.08 7423084 614 F 1843491 Selenomonadaceae 0.06 5218638 6939 G 970 Selenomonas 0.04 3298913 497808 G1 2637378 unclassified Selenomonas 0.01 759925 759925 S 712528 Selenomonas sp. oral taxon 126 0.01 682251 682251 S 1884263 Selenomonas sp. oral taxon 920 0.01 598485 598485 S 2754044 Selenomonas sp. Marseille-Q3039 0.00 406131 406131 S 713030 Selenomonas sp. oral taxon 136 0.00 354313 354313 S 712538 Selenomonas sp. oral taxon 478 0.01 1129160 4326 S 971 Selenomonas ruminantium 0.01 1124834 0 S1 114197 Selenomonas ruminantium subsp. lactilytica 0.01 1124834 1124834 S2 927704 Selenomonas ruminantium subsp. lactilytica TAM6421 0.01 783626 0 S 69823 Selenomonas sputigena 0.01 783626 783626 S1 546271 Selenomonas sputigena ATCC 35185 0.02 1357084 13284 G 158846 Megamonas 0.01 717275 717275 S 437897 Megamonas funiformis 0.01 626525 626525 S 158847 Megamonas hypermegale 0.01 846748 0 G 864 Pectinatus 0.01 846748 846748 S 865 Pectinatus frisingensis 0.07 6295230 3153 F 1843490 Sporomusaceae 0.04 3194575 17755 G 365348 Pelosinus 0.02 1629876 0 S 365349 Pelosinus fermentans 0.02 1629876 1629876 S1 1192197 Pelosinus fermentans JBW45 0.02 1546944 0 G1 2629460 unclassified Pelosinus 0.02 1546944 1546944 S 484770 Pelosinus sp. UFO1 0.02 1637421 0 G 2375 Sporomusa 0.02 1637421 1637421 S 2377 Sporomusa termitida 0.02 1460081 0 G 2093783 Methylomusa 0.02 1460081 1460081 S 1930071 Methylomusa anaerophila 0.08 6881327 0 O 1843489 Veillonellales 0.08 6881327 655 F 31977 Veillonellaceae 0.04 3702381 308922 G 29465 Veillonella 0.02 1368543 1175917 S 29466 Veillonella parvula 0.00 192615 192615 S1 1316254 Veillonella parvula HSIVP1 0.00 11 11 S1 479436 Veillonella parvula DSM 2008 0.01 600950 600950 S 248315 Veillonella rodentium 0.01 586097 586097 S 39777 Veillonella atypica 0.00 431147 431147 S 39778 Veillonella dispar 0.00 406722 0 G1 2630086 unclassified Veillonella 0.00 405415 405415 S 2682456 Veillonella sp. T1-7 0.00 1307 1307 S 1096935 Veillonella sp. OK1 0.02 2021653 5880 G 906 Megasphaera 0.01 1224618 839576 S 907 Megasphaera elsdenii 0.00 210597 210597 S1 1458465 Megasphaera elsdenii 14-14 0.00 174445 174445 S1 1064535 Megasphaera elsdenii DSM 20460 0.01 791155 791155 S 2144175 Megasphaera stantonii 0.01 1156638 586937 G 39948 Dialister 0.00 380227 380227 S 39950 Dialister pneumosintes 0.00 97892 97892 S 2582419 Dialister hominis 0.00 91582 91582 S 2161821 Dialister massiliensis 0.03 2634005 0 O 1843488 Acidaminococcales 0.03 2634005 220 F 909930 Acidaminococcaceae 0.02 1531457 1757 G 904 Acidaminococcus 0.01 797723 698923 S 187327 Acidaminococcus intestini 0.00 98800 98800 S1 568816 Acidaminococcus intestini RyC-MR95 0.01 731977 0 S 905 Acidaminococcus fermentans 0.01 731977 731977 S1 591001 Acidaminococcus fermentans DSM 20731 0.01 1102328 0 G 33024 Phascolarctobacterium 0.01 1102328 1102328 S 33025 Phascolarctobacterium faecium 0.15 13913875 0 C 526524 Erysipelotrichia 0.15 13913875 0 O 526525 Erysipelotrichales 0.15 13913875 1692662 F 128827 Erysipelotrichaceae 0.05 4849419 79330 G 1647 Erysipelothrix 0.02 2075767 3015 G1 2624170 unclassified Erysipelothrix 0.01 741174 741174 S 2714930 Erysipelothrix sp. HDW6C 0.01 694470 694470 S 2714929 Erysipelothrix sp. HDW6B 0.01 637108 637108 S 2714928 Erysipelothrix sp. HDW6A 0.01 822771 809325 S 1648 Erysipelothrix rhusiopathiae 0.00 12903 12903 S1 1313290 Erysipelothrix rhusiopathiae SY1027 0.00 543 543 S1 650150 Erysipelothrix rhusiopathiae str. Fujisawa 0.01 756533 756533 S 1514105 Erysipelothrix larvae 0.01 675832 675832 S 225084 Erysipelothrix inopinata 0.00 439186 439186 S 2485784 Erysipelothrix piscisicarius 0.02 1836362 11 G 1505663 Erysipelatoclostridium 0.01 964819 0 S 1547 Erysipelatoclostridium ramosum 0.01 964819 964819 S1 445974 Erysipelatoclostridium ramosum DSM 1402 0.01 871532 871532 S 1522 [Clostridium] innocuum 0.02 1639308 9834 G 191303 Turicibacter 0.01 882089 882089 S 154288 Turicibacter sanguinis 0.01 747385 0 G1 2638206 unclassified Turicibacter 0.01 747385 747385 S 1712675 Turicibacter sp. H121 0.01 923883 0 G 2749267 Amedibacterium 0.01 923883 923883 S 2583452 Amedibacterium intestinale 0.01 913612 0 G 2679910 Intestinibaculum 0.01 913612 913612 S 2487118 Intestinibaculum porci 0.01 763233 0 G 1729679 Faecalibaculum 0.01 763233 763233 S 1702221 Faecalibaculum rodentium 0.01 470806 0 G 1573534 Faecalitalea 0.01 470806 0 S 39483 Faecalitalea cylindroides 0.01 470806 470806 S1 717960 Faecalitalea cylindroides T2-87 0.00 440100 0 G 1918538 Longibaculum 0.00 440100 0 G1 2636055 unclassified Longibaculum 0.00 440100 440100 S 2584943 Longibaculum sp. KGMB06250 0.00 384490 0 F1 544447 unclassified Erysipelotrichaceae 0.00 383897 383897 S 2109692 Erysipelotrichaceae bacterium GAM147 0.00 593 593 S 1834207 Erysipelotrichaceae bacterium I46 0.10 9043709 14960 C 1737404 Tissierellia 0.09 8541716 793 O 1737405 Tissierellales 0.06 4962928 14183 F 1570339 Peptoniphilaceae 0.02 1440283 278 G 162289 Peptoniphilus 0.01 490377 490377 S 54005 Peptoniphilus harei 0.01 489348 489348 S 54006 Peptoniphilus ivorii 0.01 460280 0 G1 2637196 unclassified Peptoniphilus 0.01 460280 460280 S 1912856 Peptoniphilus sp. ING2-D1G 0.01 1217626 0 G 150022 Finegoldia 0.01 1217626 548655 S 1260 Finegoldia magna 0.00 420973 420973 S1 525282 Finegoldia magna ATCC 53516 0.00 247998 247998 S1 334413 Finegoldia magna ATCC 29328 0.01 1121419 4284 G 165779 Anaerococcus 0.01 577152 0 S 33034 Anaerococcus prevotii 0.01 577152 577152 S1 525919 Anaerococcus prevotii DSM 20548 0.01 539983 539983 S 1870984 Anaerococcus mediterraneensis 0.01 673296 0 G 543311 Parvimonas 0.01 673296 673296 S 33033 Parvimonas micra 0.01 496121 0 G 1161127 Murdochiella 0.01 496121 496121 S 1852373 Murdochiella vaginalis 0.03 2688605 707 F 1737406 Tissierellaceae 0.01 1059041 0 G 41273 Tissierella 0.01 1059041 0 G1 2638726 unclassified Tissierella 0.01 1059041 1059041 S 2507161 Tissierellia sp. JN-28 0.01 902828 0 S 45497 [Clostridium] ultunense 0.01 902828 902828 S1 1288971 [Clostridium] ultunense Esp 0.01 726029 0 G 2692382 Gudongella 0.01 726029 726029 S 1582259 Gudongella oleilytica 0.01 889390 0 F 2042895 Gottschalkiaceae 0.01 889390 0 G 1505664 Gottschalkia 0.01 889390 0 S 1556 Gottschalkia acidurici 0.01 889390 889390 S1 1128398 Gottschalkia acidurici 9a 0.01 487033 0 C1 1737407 Tissierellia incertae sedis 0.01 487033 0 G 1582879 Ezakiella 0.01 487033 487033 S 1852374 Ezakiella massiliensis 0.01 1201643 0 C 1676648 Limnochordia 0.01 1201643 0 O 1676649 Limnochordales 0.01 1201643 0 F 1676650 Limnochordaceae 0.01 1201643 0 G 1676651 Limnochorda 0.01 1201643 1201643 S 1555112 Limnochorda pilosa 0.01 559260 0 P1 33974 Firmicutes sensu stricto incertae sedis 0.01 559260 0 G 1930845 Ndongobacter 0.01 559260 559260 S 1871025 Ndongobacter massiliensis 0.01 469398 0 P1 84086 unclassified Firmicutes sensu stricto 0.01 469398 469398 S 243899 endosymbiont 'TC1' of Trimyema compressum 2.71 244546769 0 D2 1798711 Cyanobacteria/Melainabacteria group 2.71 244546769 428209 P 1117 Cyanobacteria 1.18 106274219 6807456 O 1161 Nostocales 0.55 49386328 3935523 F 1162 Nostocaceae 0.42 38144636 2641270 G 1177 Nostoc 0.25 22560006 2719553 G1 2593658 unclassified Nostoc 0.03 2439863 2439863 S 2005458 Nostoc sp. NIES-4103 0.02 2162948 2162948 S 2576902 Nostoc sp. C052 0.02 2108672 2108672 S 2576904 Nostoc sp. TCL26-01 0.02 2069632 2069632 S 1869241 Nostoc sp. CENA543 0.02 1909946 1909946 S 28072 Nostoc sp. PCC 7524 0.02 1828311 1828311 S 1261031 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 0.02 1607974 1607974 S 1618022 Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' 0.02 1449930 1449930 S 317936 Nostoc sp. PCC 7107 0.01 1207312 1207312 S 2572090 Nostoc sp. TCL240-02 0.01 886835 886835 S 2576903 Nostoc sp. C057 0.01 833361 833361 S 76335 Nostoc sp. ATCC 53789 0.01 765519 765519 S 1973475 Nostoc sp. NIES-2111 0.01 544123 544123 S 1751286 Nostoc sp. NIES-3756 0.00 26027 26027 S 103690 Nostoc sp. PCC 7120 = FACHB-418 0.03 2302913 0 S 92942 Nostoc linckia 0.03 2302913 2302913 S1 1091006 Nostoc linckia NIES-25 0.02 2141536 1251669 S 446679 Nostoc sphaeroides 0.01 889867 889867 S1 2653204 Nostoc sphaeroides CCNUC1 0.02 1933223 0 S 1306274 Nostoc flagelliforme 0.02 1933223 1933223 S1 2038116 Nostoc flagelliforme CCNUN1 0.02 1910198 0 S 224012 Nostoc piscinale 0.02 1910198 1910198 S1 224013 Nostoc piscinale CENA21 0.02 1737809 0 S 264686 Nostoc edaphicum 0.02 1737809 1737809 S1 1472755 Nostoc edaphicum CCNP1411 0.02 1467324 0 S 272131 Nostoc punctiforme 0.02 1467324 1467324 S1 63737 Nostoc punctiforme PCC 73102 0.02 1450357 0 S 374162 Nostoc carneum 0.02 1450357 1450357 S1 1973483 Nostoc carneum NIES-2107 0.04 3541589 10404 G 1163 Anabaena 0.02 1987388 0 S 1165 Anabaena cylindrica 0.02 1987388 1987388 S1 272123 Anabaena cylindrica PCC 7122 0.02 1543797 42209 G1 2619674 unclassified Anabaena 0.01 987206 987206 S 1647413 Anabaena sp. WA102 0.01 502900 502900 S 46234 Anabaena sp. 90 0.00 11482 11482 S 2490939 Anabaena sp. YBS01 0.02 2197889 0 G 56106 Cylindrospermum 0.02 2195809 0 S 142864 Cylindrospermum stagnale 0.02 2195809 2195809 S1 56107 Cylindrospermum stagnale PCC 7417 0.00 2080 0 G1 2630404 unclassified Cylindrospermum 0.00 2080 2080 S 380087 Cylindrospermum sp. A1345 0.02 1566691 9 G 264688 Trichormus 0.02 1473105 0 S 1164 Trichormus azollae 0.02 1473105 1473105 S1 551115 'Nostoc azollae' 0708 0.00 93577 12849 S 264691 Trichormus variabilis 0.00 80282 80282 S1 1973479 Trichormus variabilis NIES-23 0.00 258 258 S1 240292 Trichormus variabilis ATCC 29413 0.00 188 188 S1 375899 Trichormus variabilis 0441 0.25 22184142 0 F 2661849 Calotrichaceae 0.25 22184142 118017 G 1186 Calothrix 0.16 14778239 3796572 G1 2619626 unclassified Calothrix 0.03 2695930 2695930 S 1954172 Calothrix sp. NIES-2100 0.03 2462355 2462355 S 1954171 Calothrix sp. NIES-2098 0.02 2008189 2008189 S 99598 Calothrix sp. PCC 7507 0.02 1962155 1962155 S 1337936 Calothrix sp. 336/3 0.02 1849078 1849078 S 2005462 Calothrix sp. NIES-3974 0.00 3670 3670 S 2005469 Calothrix sp. NIES-4071 0.00 290 290 S 2005463 Calothrix sp. NIES-4105 0.03 2767237 0 S 1973486 Calothrix parasitica 0.03 2767237 2767237 S1 1973488 Calothrix parasitica NIES-267 0.03 2421474 0 S 938406 Calothrix brevissima 0.03 2421474 2421474 S1 1973478 Calothrix brevissima NIES-22 0.02 2099175 0 S 32054 Calothrix parietina 0.02 2099175 2099175 S1 1170562 Calothrix sp. PCC 6303 0.09 8517388 589653 F 1892259 Aphanizomenonaceae 0.02 1986749 227289 G 748770 Dolichospermum 0.01 942873 0 S 136073 Dolichospermum compactum 0.01 942873 942873 S1 1973481 Dolichospermum compactum NIES-806 0.00 426222 0 G1 2622029 unclassified Dolichospermum 0.00 426222 426222 S 1914871 Dolichospermum sp. UHCC 0315A 0.00 390365 0 S 1166 Dolichospermum flos-aquae 0.00 390365 390365 S1 315271 Dolichospermum flos-aquae CCAP 1403/13F 0.02 1682700 0 G 159191 Nodularia 0.02 1682700 1378617 S 70799 Nodularia spumigena 0.00 153488 153488 S1 313624 Nodularia spumigena CCY9414 0.00 150595 150595 S1 1914872 Nodularia spumigena UHCC 0039 0.02 1603757 0 G 110103 Anabaenopsis 0.02 1603757 0 S 109266 Anabaenopsis circularis 0.02 1603757 1603757 S1 1085406 Anabaenopsis circularis NIES-21 0.02 1524891 0 G 752201 Sphaerospermopsis 0.02 1524891 0 S 289435 Sphaerospermopsis kisseleviana 0.02 1524891 1524891 S1 1973480 Sphaerospermopsis kisseleviana NIES-73 0.01 645471 0 G 77021 Cylindrospermopsis 0.01 645471 0 S 747548 Cylindrospermopsis curvispora 0.01 645471 645471 S1 2666332 Cylindrospermopsis curvispora GIHE-G1 0.01 484167 0 G 244599 Raphidiopsis 0.01 484167 0 S 312883 Raphidiopsis curvata 0.01 484167 484167 S1 1973482 Raphidiopsis curvata NIES-932 0.08 7310242 60649 F 1182 Scytonemataceae 0.05 4858755 0 G 1203 Scytonema 0.05 4858755 778373 G1 2618749 unclassified Scytonema 0.02 2061195 2061195 S 1137095 Scytonema sp. HK-05 0.02 2019187 2019187 S 2005464 Scytonema sp. NIES-4073 0.03 2390838 2377857 G 383614 Brasilonema 0.00 9244 0 S 1397703 Brasilonema sennae 0.00 9244 9244 S1 415709 Brasilonema sennae CENA114 0.00 3737 0 S 417105 Brasilonema octagenarum 0.00 3737 3737 S1 417106 Brasilonema octagenarum UFV-E1 0.05 4272133 190 F 1185 Rivulariaceae 0.03 2586862 0 G 373984 Rivularia 0.03 2586862 0 G1 2676603 unclassified Rivularia (in: Bacteria) 0.03 2586862 2586862 S 373994 Rivularia sp. PCC 7116 0.02 1685081 0 G 188910 Microchaete 0.02 1685081 0 S 1197 Microchaete diplosiphon 0.02 1685081 1685081 S1 1973485 Fremyella diplosiphon NIES-3275 0.04 3737643 0 F 1892263 Hapalosiphonaceae 0.04 3737643 0 G 1190 Fischerella 0.04 3737643 75096 G1 494603 unclassified Fischerella 0.02 2047012 2047012 S 2005456 Fischerella sp. NIES-4106 0.02 1615535 1615535 S 1752063 Fischerella sp. NIES-3754 0.03 2284168 0 O1 1219117 unclassified Nostocales 0.03 2284168 2284168 S 1940762 Nostocales cyanobacterium HT-58-2 0.02 1773827 0 F 119859 Tolypothrichaceae 0.02 1773827 4 G 111782 Tolypothrix 0.02 1773203 0 G1 2649714 unclassified Tolypothrix 0.02 1773203 1773203 S 2099387 Tolypothrix sp. PCC 7910 0.00 620 0 S 457083 Tolypothrix tenuis 0.00 620 620 S1 231146 Tolypothrix tenuis PCC 7101 0.00 892 0 F 1892264 Fortieaceae 0.00 892 0 G 212347 Aulosira 0.00 892 0 S 1541975 Aulosira laxa 0.00 892 892 S1 1541988 Aulosira laxa NIES-50 0.81 73237835 323940 O 1890424 Synechococcales 0.51 45570186 87617 F 1890426 Synechococcaceae 0.43 38790908 876764 G 1129 Synechococcus 0.41 36820696 6384899 G1 2626047 unclassified Synechococcus 0.02 1562952 1562952 S 195250 Synechococcus sp. PCC 7336 0.01 1189542 1189542 S 195253 Synechococcus sp. PCC 6312 0.01 1109416 1109416 S 1173263 Synechococcus sp. PCC 7502 0.01 960077 960077 S 1827144 Synechococcus sp. NIES-970 0.01 954438 954438 S 1400864 Synechococcus sp. BIOS-E4-1 0.01 868081 868081 S 321332 Synechococcus sp. JA-2-3B'a(2-13) 0.01 865648 865648 S 2511069 Synechococcus sp. RSCCF101 0.01 859197 859197 S 1280380 Synechococcus sp. KORDI-100 0.01 846076 846076 S 374981 Synechococcus sp. PCC 7003 0.01 829557 829557 S 1916956 Synechococcus sp. SynAce01 0.01 819747 819747 S 321327 Synechococcus sp. JA-3-3Ab 0.01 816497 816497 S 232348 Synechococcus sp. CB0101 0.01 780870 780870 S 1400865 Synechococcus sp. BIOS-U3-1 0.01 747556 747556 S 1442557 Synechococcus sp. ROS8604 0.01 727509 727509 S 2751171 Synechococcus sp. HK01-R 0.01 726066 726066 S 2751170 Synechococcus sp. LTW-R 0.01 720788 720788 S 1442555 Synechococcus sp. NOUM97013 0.01 715142 715142 S 1400866 Synechococcus sp. PROS-U-1 0.01 700140 700140 S 316279 Synechococcus sp. CC9902 0.01 678053 678053 S 166309 Synechococcus sp. MIT S9220 0.01 654624 654624 S 32052 Synechococcus sp. WH 8020 0.01 645462 645462 S 585425 Synechococcus sp. KORDI-52 0.01 628261 628261 S 64471 Synechococcus sp. CC9311 0.01 616380 616380 S 1050638 Synechococcus sp. A15-28 0.01 602164 602164 S 59932 Synechococcus sp. WH 8101 0.01 589358 589358 S 221352 Synechococcus sp. RS9909 0.01 579400 579400 S 1442554 Synechococcus sp. MEDNS5 0.01 560554 560554 S 1442556 Synechococcus sp. PROS-7-1 0.01 547777 547777 S 1968775 Synechococcus sp. PROS-9-1 0.00 432218 432218 S 585423 Synechococcus sp. KORDI-49 0.00 429564 429564 S 110662 Synechococcus sp. CC9605 0.00 424639 424639 S 1050635 Synechococcus sp. A15-24 0.00 424227 424227 S 1050624 Synechococcus sp. A15-127 0.00 422407 422407 S 1050714 Synechococcus sp. SYN20 0.00 382725 382725 S 1050646 Synechococcus sp. A15-44 0.00 361392 361392 S 166314 Synechococcus sp. WH 8109 0.00 335954 335954 S 221345 Synechococcus sp. RS9902 0.00 335791 335791 S 1386941 Synechococcus sp. MVIR-18-1 0.00 334922 334922 S 1050657 Synechococcus sp. A15-62 0.00 284595 284595 S 1442551 Synechococcus sp. BMK-MC-1 0.00 276802 276802 S 32049 Synechococcus sp. PCC 7002 0.00 263900 263900 S 32051 Synechococcus sp. WH 7803 0.00 259290 259290 S 221341 Synechococcus sp. Minos11 0.00 254719 254719 S 195498 Synechococcus sp. PCC 7117 0.00 249395 249395 S 1442558 Synechococcus sp. TAK9802 0.00 246287 246287 S 374982 Synechococcus sp. PCC 73109 0.00 240527 240527 S 316278 Synechococcus sp. RCC307 0.00 235937 235937 S 2579791 Synechococcus sp. PCC 11901 0.00 216234 216234 S 195248 Synechococcus sp. PCC 8807 0.00 215140 215140 S 1442553 Synechococcus sp. M16.1 0.00 147916 147916 S 1866939 Synechococcus sp. A18-40 0.00 147604 147604 S 1050655 Synechococcus sp. A15-60 0.00 137885 137885 S 1866938 Synechococcus sp. A18-25c 0.00 122093 122093 S 221358 Synechococcus sp. RS9915 0.00 102799 102799 S 1866940 Synechococcus sp. A18-46.1 0.00 100017 100017 S 1442552 Synechococcus sp. BOUM118 0.00 75674 75674 S 84588 Synechococcus sp. WH 8102 0.00 72908 72908 S 29410 Synechococcus sp. WH 8103 0.00 747 747 S 1131 Synechococcus sp. 0.00 157 157 S 1350461 Synechococcus sp. UTEX 2973 0.01 822387 0 S 33070 Synechococcus lividus 0.01 822387 822387 S1 1917166 Synechococcus lividus PCC 6715 0.00 271061 2089 S 32046 Synechococcus elongatus 0.00 253762 253762 S1 2479200 Synechococcus elongatus UTEX 3055 0.00 14917 14917 S1 269084 Synechococcus elongatus PCC 6301 0.00 293 293 S1 1140 Synechococcus elongatus PCC 7942 = FACHB-805 0.03 2953402 822669 G 146785 Thermosynechococcus 0.01 1242576 18968 G1 2622553 unclassified Thermosynechococcus 0.01 657667 657667 S 2583530 Thermosynechococcus sp. CL-1 0.01 565941 565941 S 1394889 Thermosynechococcus sp. NK55a 0.01 781533 1118 S 146786 Thermosynechococcus elongatus 0.01 674311 674311 S1 2016101 Thermosynechococcus elongatus PKUAC-SCTE542 0.00 106104 106104 S1 197221 Thermosynechococcus elongatus BP-1 0.00 106624 0 S 32053 Thermosynechococcus vulcanus 0.00 106624 106624 S1 2005468 Thermosynechococcus vulcanus NIES-2134 0.03 2639596 11709 G 167375 Cyanobium 0.02 1657381 16181 G1 2627006 unclassified Cyanobium 0.01 848922 848922 S 1851505 Cyanobium sp. NIES-981 0.01 792278 792278 S 261284 Cyanobium sp. NS01 0.01 970506 0 S 59930 Cyanobium gracile 0.01 970506 970506 S1 292564 Cyanobium gracile PCC 6307 0.01 1098663 0 G 13034 Dactylococcopsis 0.01 1098663 0 S 292566 Dactylococcopsis salina 0.01 1098663 1098663 S1 13035 Dactylococcopsis salina PCC 8305 0.08 7372585 0 F 1890438 Leptolyngbyaceae 0.08 7372585 10066 G 47251 Leptolyngbya 0.06 5071490 163 G1 2650499 unclassified Leptolyngbya 0.02 2130761 2130761 S 1752064 Leptolyngbya sp. NIES-3755 0.02 1537385 1537385 S 111781 Leptolyngbya sp. PCC 7376 0.02 1401834 1401834 S 1080068 Leptolyngbya sp. O-77 0.00 1347 1347 S 272136 Leptolyngbya sp. PCC 6402 0.03 2290992 2147434 S 1184 Leptolyngbya boryana 0.00 143521 143521 S1 1973484 Leptolyngbya boryana NIES-2135 0.00 19 19 S1 411966 Leptolyngbya boryana IAM M-101 0.00 18 18 S1 1260963 Leptolyngbya boryana dg5 0.00 37 37 S 47253 Leptolyngbya foveolarum 0.07 6067586 0 F 1213 Prochloraceae 0.07 6067586 499835 G 1218 Prochlorococcus 0.05 4636551 285207 S 1219 Prochlorococcus marinus 0.01 759314 759314 S1 74547 Prochlorococcus marinus str. MIT 9313 0.01 542157 0 S1 142554 Prochlorococcus marinus subsp. marinus 0.01 542157 542157 S2 167539 Prochlorococcus marinus subsp. marinus str. CCMP1375 0.01 526902 526902 S1 93059 Prochlorococcus marinus str. MIT 9211 0.00 450701 450701 S1 167542 Prochlorococcus marinus str. MIT 9515 0.00 436598 0 S1 142479 Prochlorococcus marinus subsp. pastoris 0.00 436598 436598 S2 59919 Prochlorococcus marinus subsp. pastoris str. CCMP1986 0.00 365780 365780 S1 74546 Prochlorococcus marinus str. MIT 9312 0.00 337700 337700 S1 93060 Prochlorococcus marinus str. MIT 9215 0.00 251871 251871 S1 167546 Prochlorococcus marinus str. MIT 9301 0.00 239771 239771 S1 146891 Prochlorococcus marinus str. AS9601 0.00 223159 223159 S1 167555 Prochlorococcus marinus str. NATL1A 0.00 217391 217391 S1 59920 Prochlorococcus marinus str. NATL2A 0.01 931200 247735 G1 2627481 unclassified Prochlorococcus 0.00 390705 390705 S 1501269 Prochlorococcus sp. MIT 0801 0.00 292359 292359 S 1501268 Prochlorococcus sp. MIT 0604 0.00 389 389 S 1924286 Prochlorococcus sp. RS01 0.00 11 11 S 1924287 Prochlorococcus sp. RS04 0.00 1 1 S 1924285 Prochlorococcus sp. RS50 0.04 3319462 0 F 1890436 Pseudanabaenaceae 0.04 3319462 0 G 1152 Pseudanabaena 0.04 3319462 160 G1 2593292 unclassified Pseudanabaena 0.02 1775333 1775333 S 685565 Pseudanabaena sp. ABRG5-3 0.02 1543969 1543969 S 82654 Pseudanabaena sp. PCC 7367 0.03 2867516 0 F 1890428 Merismopediaceae 0.03 2867516 0 G 1142 Synechocystis 0.03 2867516 1251673 G1 2640012 unclassified Synechocystis 0.01 1119583 1119583 S 1147 Synechocystis sp. PCC 6714 0.01 493218 493218 S 1933929 Synechocystis sp. CACIAM 05 0.00 2365 2236 S 1148 Synechocystis sp. PCC 6803 0.00 54 54 S1 1080228 Synechocystis sp. PCC 6803 substr. GT-I 0.00 54 54 S1 1080229 Synechocystis sp. PCC 6803 substr. PCC-N 0.00 21 21 S1 1080230 Synechocystis sp. PCC 6803 substr. PCC-P 0.00 677 677 S 2116702 Synechocystis sp. IPPAS B-1465 0.03 2537646 0 F 1890429 Acaryochloridaceae 0.03 2537646 0 G 155977 Acaryochloris 0.03 2537646 0 S 155978 Acaryochloris marina 0.03 2537646 2537646 S1 329726 Acaryochloris marina MBIC11017 0.02 2051547 0 F 1890431 Chamaesiphonaceae 0.02 2051547 0 G 217161 Chamaesiphon 0.02 2051547 0 S 1173032 Chamaesiphon minutus 0.02 2051547 2051547 S1 1173020 Chamaesiphon minutus PCC 6605 0.02 1761000 0 F 2303730 Prochlorotrichaceae 0.02 1761000 0 G 170610 Halomicronema 0.02 1761000 0 S 1209493 Halomicronema hongdechloris 0.02 1761000 1761000 S1 1641165 Halomicronema hongdechloris C2206 0.02 1366367 0 F 2303507 Oculatellaceae 0.02 1366367 0 G 2303528 Thermoleptolyngbya 0.02 1366367 0 G1 2619029 unclassified Thermoleptolyngbya 0.02 1366367 1366367 S 2737172 Thermoleptolyngbya sp. PKUAC-SCTA183 0.58 52407814 22932 P1 1301283 Oscillatoriophycideae 0.31 27940836 22169 O 1150 Oscillatoriales 0.13 11416160 1522718 F 1892252 Microcoleaceae 0.03 2487651 0 G 44471 Microcoleus 0.03 2487651 0 G1 2642155 unclassified Microcoleus 0.03 2487651 2487651 S 1173027 Microcoleus sp. PCC 7113 0.02 2152150 0 G 1205 Trichodesmium 0.02 2152150 0 S 1206 Trichodesmium erythraeum 0.02 2152150 2152150 S1 203124 Trichodesmium erythraeum IMS101 0.02 1954577 0 G 1492710 Oxynema 0.02 1954577 0 G1 2623294 unclassified Oxynema 0.02 1954577 1954577 S 2064643 Oxynema sp. AP17 0.02 1550927 0 G 54304 Planktothrix 0.02 1550927 1460 S 1160 Planktothrix agardhii 0.02 1549467 1549467 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.02 1524269 0 G 35823 Arthrospira 0.02 1524269 1067042 S 118562 Arthrospira platensis 0.00 210439 210439 S1 459495 Arthrospira platensis C1 0.00 166316 166316 S1 696747 Arthrospira platensis NIES-39 0.00 80472 80472 S1 1738638 Arthrospira platensis YZ 0.00 223868 0 G 2596745 Limnospira 0.00 223868 0 S 147322 Limnospira indica 0.00 223868 223868 S1 376219 Limnospira indica PCC 8005 0.11 9763883 414 F 1892254 Oscillatoriaceae 0.05 4891667 0 G 1155738 Moorea 0.05 4891667 754406 S 1155739 Moorea producens 0.02 2094183 2094183 S1 1458985 Moorea producens PAL-8-15-08-1 0.02 2043078 2043078 S1 1454205 Moorea producens JHB 0.05 4871802 420 G 1158 Oscillatoria 0.03 2458924 0 S 482564 Oscillatoria nigro-viridis 0.03 2458924 2458924 S1 179408 Oscillatoria nigro-viridis PCC 7112 0.03 2412458 0 S 118323 Oscillatoria acuminata 0.03 2412458 2412458 S1 56110 Oscillatoria acuminata PCC 6304 0.02 1813984 0 F 1892249 Cyanothecaceae 0.02 1813984 0 G 43988 Cyanothece 0.02 1813984 0 G1 2649277 unclassified Cyanothece 0.02 1813984 1813984 S 395961 Cyanothece sp. PCC 7425 0.02 1730903 0 O1 44887 unclassified Oscillatoriales 0.02 1730903 1730903 S 864702 Oscillatoriales cyanobacterium JSC-12 0.02 1711672 0 F 1892255 Gomontiellaceae 0.02 1711672 0 G 241421 Crinalium 0.02 1711672 0 S 241425 Crinalium epipsammum 0.02 1711672 1711672 S1 1173022 Crinalium epipsammum PCC 9333 0.02 1482065 0 F 1892251 Coleofasciculaceae 0.02 1482065 0 G 63132 Geitlerinema 0.02 1482065 0 G1 2648775 unclassified Geitlerinema 0.02 1482065 1482065 S 1173025 Geitlerinema sp. PCC 7407 0.27 24444046 29666 O 1118 Chroococcales 0.12 10538864 8239 F 1890450 Aphanothecaceae 0.05 4324357 18135 G 28070 Gloeothece 0.03 2361212 0 S 2546359 Gloeothece verrucosa 0.03 2361212 2361212 S1 497965 Gloeothece verrucosa PCC 7822 0.02 1945010 0 S 2546356 Gloeothece citriformis 0.02 1945010 1945010 S1 65393 Gloeothece citriformis PCC 7424 0.03 2338374 5054 F1 92682 Halothece cluster 0.01 1279380 0 G 76023 Halothece 0.01 1279380 0 G1 2632878 unclassified Halothece 0.01 1279380 1279380 S 65093 Halothece sp. PCC 7418 0.01 1053940 0 G 65097 Euhalothece 0.01 1053940 0 S 577489 Euhalothece natronophila 0.01 1053940 1053940 S1 522448 Euhalothece natronophila Z-M001 0.02 1762885 0 G 2546365 Rippkaea 0.02 1762885 1205585 S 2546366 Rippkaea orientalis 0.00 283585 283585 S1 395962 Rippkaea orientalis PCC 8802 0.00 273715 273715 S1 41431 Rippkaea orientalis PCC 8801 0.02 1683690 0 G 263510 Crocosphaera 0.02 1683690 0 S 2546360 Crocosphaera subtropica 0.02 1683690 1683690 S1 43989 Crocosphaera subtropica ATCC 51142 0.00 421319 0 G 1453359 Candidatus Atelocyanobacterium 0.00 421319 0 S 713887 Candidatus Atelocyanobacterium thalassa 0.00 421319 421319 S1 1453429 Candidatus Atelocyanobacterium thalassa isolate ALOHA 0.08 7015208 735 F 1890464 Chroococcaceae 0.04 3634116 35038 G 669357 Geminocystis 0.03 2390738 14822 G1 2625037 unclassified Geminocystis 0.01 1233540 1233540 S 1617448 Geminocystis sp. NIES-3709 0.01 1142376 1142376 S 1615909 Geminocystis sp. NIES-3708 0.01 1208340 0 S 669359 Geminocystis herdmanii 0.01 1208340 1208340 S1 113355 Geminocystis herdmanii PCC 6308 0.02 1853223 0 G 102231 Gloeocapsa 0.02 1853223 0 G1 2623012 unclassified Gloeocapsa 0.02 1853223 1853223 S 1173026 Gloeocapsa sp. PCC 7428 0.02 1527134 0 G 268175 Chondrocystis 0.02 1527134 0 G1 2648896 unclassified Chondrocystis 0.02 1527134 1527134 S 2005460 Chondrocystis sp. NIES-4102 0.06 5649527 0 F 1890449 Microcystaceae 0.06 5649527 2095323 G 1125 Microcystis 0.03 2477960 740367 S 1126 Microcystis aeruginosa 0.01 733833 733833 S1 2686288 Microcystis aeruginosa FD4 0.00 370236 0 S1 267872 Microcystis aeruginosa PCC 7806 0.00 370236 370236 S2 1903187 Microcystis aeruginosa PCC 7806SL 0.00 343136 343136 S1 449468 Microcystis aeruginosa NIES-298 0.00 169439 169439 S1 449447 Microcystis aeruginosa NIES-843 0.00 73948 73948 S1 1698524 Microcystis aeruginosa NIES-2481 0.00 47001 47001 S1 1641812 Microcystis aeruginosa NIES-2549 0.01 479719 0 G1 2643300 unclassified Microcystis 0.01 479719 479719 S 1967666 Microcystis sp. MC19 0.00 438567 0 S 513223 Microcystis panniformis 0.00 438567 438567 S1 1638788 Microcystis panniformis FACHB-1757 0.00 157958 0 S 44822 Microcystis viridis 0.00 157958 157958 S1 213615 Microcystis viridis NIES-102 0.01 1210781 0 F 1890452 Cyanobacteriaceae 0.01 1210781 0 G 102234 Cyanobacterium 0.01 1210781 0 S 379064 Cyanobacterium aponinum 0.01 1210781 1210781 S1 755178 Cyanobacterium aponinum PCC 10605 0.05 4638035 908 O 52604 Pleurocapsales 0.03 3101661 0 F 1890498 Dermocarpellaceae 0.03 3101661 207988 G 102115 Stanieria 0.02 1462334 0 S 102116 Stanieria cyanosphaera 0.02 1462334 1462334 S1 111780 Stanieria cyanosphaera PCC 7437 0.02 1431339 0 G1 2642663 unclassified Stanieria 0.02 1431339 1431339 S 1807358 Stanieria sp. NIES-3757 0.02 1535466 0 F 1890500 Hyellaceae 0.02 1535466 0 G 44474 Pleurocapsa 0.02 1535466 0 S 54308 Pleurocapsa minor 0.02 1535466 1535466 S1 118163 Pleurocapsa sp. PCC 7327 0.03 2930795 0 C 307596 Gloeobacteria 0.03 2930795 0 O 307595 Gloeobacterales 0.03 2930795 0 F 1890422 Gloeobacteraceae 0.03 2930795 6725 G 33071 Gloeobacter 0.02 1469543 0 S 1416614 Gloeobacter kilaueensis 0.02 1469543 1469543 S1 1183438 Gloeobacter kilaueensis JS1 0.02 1454527 0 S 33072 Gloeobacter violaceus 0.02 1454527 1454527 S1 251221 Gloeobacter violaceus PCC 7421 0.02 2066915 0 O 1890505 Chroococcidiopsidales 0.02 2066915 0 F 1890528 Chroococcidiopsidaceae 0.02 2066915 0 G 54298 Chroococcidiopsis 0.02 2066915 0 S 54299 Chroococcidiopsis thermalis 0.02 2066915 2066915 S1 251229 Chroococcidiopsis thermalis PCC 7203 0.02 1618308 75302 P1 1983111 unclassified Cyanobacteria 0.01 806350 806350 S 1763363 cyanobacterium endosymbiont of Rhopalodia gibberula 0.01 736656 0 S 718217 cyanobacterium endosymbiont of Epithemia turgida 0.01 736656 736656 S1 1228987 cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 0.01 944639 0 O 1955042 Gloeoemargaritales 0.01 944639 0 F 1955043 Gloeomargaritaceae 0.01 944639 0 G 1188227 Gloeomargarita 0.01 944639 0 S 1188228 Gloeomargarita lithophora 0.01 944639 944639 S1 1188229 Gloeomargarita lithophora Alchichica-D10 0.40 36487160 5992 P 544448 Tenericutes 0.38 34712785 24320 C 31969 Mollicutes 0.22 20168732 0 O 2085 Mycoplasmatales 0.22 20168732 39048 F 2092 Mycoplasmataceae 0.20 17922992 686677 G 2093 Mycoplasma 0.02 1953057 1623 G1 2683645 unclassified Mycoplasma 0.00 303958 303958 S 2683967 Mycoplasma sp. NEAQ87857 0.00 244139 244139 S 2742195 Mycoplasma sp. OR1901 0.00 235195 235195 S 640330 Mycoplasma sp. Pen4 0.00 226241 226241 S 754515 Mycoplasma sp. Mirounga ES2806-GEN 0.00 211031 211031 S 2725994 Mycoplasma sp. 1654_15 0.00 197273 197273 S 2726117 Mycoplasma sp. C264-NAS 0.00 178313 178313 S 754517 Mycoplasma sp. Phocoena C-264-GEN 0.00 178266 178266 S 754516 Mycoplasma sp. Mirounga ES2806-NAS 0.00 177018 177018 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) 0.01 638146 32272 G1 656088 Mycoplasma mycoides group 0.00 362716 142121 S 2102 Mycoplasma mycoides 0.00 213941 132284 S1 40477 Mycoplasma mycoides subsp. capri 0.00 81657 200 S2 44100 Mycoplasma mycoides subsp. capri LC 0.00 81139 81139 S3 862259 Mycoplasma mycoides subsp. capri LC str. 95010 0.00 318 318 S3 436113 Mycoplasma mycoides subsp. capri str. GM12 0.00 6654 6166 S1 2103 Mycoplasma mycoides subsp. mycoides 0.00 488 0 S2 44101 Mycoplasma mycoides subsp. mycoides SC 0.00 488 488 S3 865867 Mycoplasma mycoides subsp. mycoides SC str. Gladysdale 0.00 236106 57939 S 2095 Mycoplasma capricolum 0.00 102773 99732 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 2179 2179 S2 927701 Mycoplasma capricolum subsp. capripneumoniae M1601 0.00 862 862 S2 1124992 Mycoplasma capricolum subsp. capripneumoniae 87001 0.00 75394 837 S1 40479 Mycoplasma capricolum subsp. capricolum 0.00 74557 74557 S2 340047 Mycoplasma capricolum subsp. capricolum ATCC 27343 0.00 7052 175 S 2105 Mycoplasma leachii 0.00 6848 6848 S1 866629 Mycoplasma leachii 99/014/6 0.00 29 29 S1 880447 Mycoplasma leachii PG50 0.01 518851 504616 S 2098 Mycoplasma hominis 0.00 9292 9292 S1 347256 Mycoplasma hominis ATCC 23114 0.00 4943 4943 S1 1267000 Mycoplasma hominis ATCC 27545 0.01 507884 464454 S 2096 Mycoplasma gallisepticum 0.00 33146 33146 S1 1006581 Mycoplasma gallisepticum S6 0.00 5691 5505 S1 233150 Mycoplasma gallisepticum str. R 0.00 123 123 S2 710128 Mycoplasma gallisepticum str. R(high) 0.00 63 63 S2 710127 Mycoplasma gallisepticum str. R(low) 0.00 1121 1121 S1 1159202 Mycoplasma gallisepticum NC06_2006.080-5-2P 0.00 1071 1071 S1 1159204 Mycoplasma gallisepticum NC08_2008.031-4-3P 0.00 749 749 S1 1159203 Mycoplasma gallisepticum CA06_2006.052-5-2P 0.00 595 595 S1 1159200 Mycoplasma gallisepticum NY01_2001.047-5-1P 0.00 560 560 S1 1159201 Mycoplasma gallisepticum WI01_2001.043-13-2P 0.00 197 197 S1 1159199 Mycoplasma gallisepticum NC96_1596-4-2P 0.00 172 172 S1 1159197 Mycoplasma gallisepticum VA94_7994-1-7P 0.00 78 78 S1 1159198 Mycoplasma gallisepticum NC95_13295-2-2P 0.00 50 50 S1 708616 Mycoplasma gallisepticum str. F 0.01 489957 489957 S 519450 Mycoplasma anserisalpingitidis 0.00 403667 397302 S 2110 Mycoplasma agalactiae 0.00 6365 6365 S1 347257 Mycoplasma agalactiae PG2 0.00 389077 386404 S 28903 Mycoplasma bovis 0.00 2103 2103 S1 289397 Mycoplasma bovis PG45 0.00 256 256 S1 956483 Mycoplasma bovis Hubei-1 0.00 255 255 S1 1316930 Mycoplasma bovis CQ-W70 0.00 59 59 S1 767465 Mycoplasma bovis HB0801 0.00 367871 332760 S 2099 Mycoplasma hyopneumoniae 0.00 15333 14385 S1 907287 Mycoplasma hyopneumoniae 168 0.00 948 948 S2 1116211 Mycoplasma hyopneumoniae 168-L 0.00 9468 9468 S1 262719 Mycoplasma hyopneumoniae J 0.00 5158 5158 S1 262722 Mycoplasma hyopneumoniae 7448 0.00 4749 4749 S1 754503 Mycoplasma hyopneumoniae 7422 0.00 403 403 S1 295358 Mycoplasma hyopneumoniae 232 0.00 364982 364982 S 2112 Mycoplasma bovigenitalium 0.00 362432 0 S 29501 Mycoplasma haemofelis 0.00 362432 362432 S1 941640 Mycoplasma haemofelis str. Langford 1 0.00 352096 0 S 28227 Mycoplasma penetrans 0.00 352096 352096 S1 272633 Mycoplasma penetrans HF-2 0.00 339982 339982 S 29553 Mycoplasma bovirhinis 0.00 308251 308251 S 171281 Mycoplasma citelli 0.00 308068 307911 S 29555 Mycoplasma canis 0.00 157 157 S1 1117644 Mycoplasma canis PG 14 0.00 299680 299680 S 86660 Mycoplasma dispar 0.00 292973 292547 S 2116 Mycoplasma iowae 0.00 426 426 S1 1048830 Mycoplasma iowae 695 0.00 289810 229848 S 171284 Mycoplasma cynos 0.00 59962 59962 S1 1246955 Mycoplasma cynos C142 0.00 284090 0 S 136241 Mycoplasma haemocanis 0.00 284090 284090 S1 1111676 Mycoplasma haemocanis str. Illinois 0.00 273725 270384 S 2104 Mycoplasma pneumoniae 0.00 850 850 S1 272634 Mycoplasma pneumoniae M129 0.00 509 509 S1 1441379 Mycoplasma pneumoniae M29 0.00 445 445 S1 1263835 Mycoplasma pneumoniae MAC 0.00 304 304 S1 1263763 Mycoplasma pneumoniae M1139 0.00 169 169 S1 1263757 Mycoplasma pneumoniae 54524 0.00 163 163 S1 1112856 Mycoplasma pneumoniae 309 0.00 145 145 S1 1280940 Mycoplasma pneumoniae M2592 0.00 139 139 S1 1263761 Mycoplasma pneumoniae 39443 0.00 128 128 S1 1213463 Mycoplasma pneumoniae 19294 0.00 118 118 S1 1263758 Mycoplasma pneumoniae 51494 0.00 108 108 S1 1263756 Mycoplasma pneumoniae 54089 0.00 96 96 S1 1233262 Mycoplasma pneumoniae PO1 0.00 62 62 S1 722438 Mycoplasma pneumoniae FH 0.00 44 44 S1 1263760 Mycoplasma pneumoniae 85138 0.00 40 40 S1 1263762 Mycoplasma pneumoniae 85084 0.00 21 21 S1 1236904 Mycoplasma pneumoniae PI 1428 0.00 269981 141128 S 57372 Mycoplasma suis 0.00 69303 69303 S1 768700 Mycoplasma suis str. Illinois 0.00 59550 59550 S1 708248 Mycoplasma suis KI3806 0.00 260746 216354 S 2123 Mycoplasma putrefaciens 0.00 44324 44324 S1 1292033 Mycoplasma putrefaciens Mput9231 0.00 68 68 S1 743965 Mycoplasma putrefaciens KS1 0.00 260616 260616 S 29562 Mycoplasma ovipneumoniae 0.00 260015 242578 S 2109 Mycoplasma synoviae 0.00 17358 17358 S1 262723 Mycoplasma synoviae 53 0.00 79 79 S1 1267001 Mycoplasma synoviae ATCC 25204 0.00 245517 245517 S 48003 Mycoplasma pullorum 0.00 244274 244274 S 114880 Mycoplasma columbinasale 0.00 243721 0 S 50052 Mycoplasma crocodyli 0.00 243721 243721 S1 512564 Mycoplasma crocodyli MP145 0.00 242412 242412 S 1612150 Mycoplasma tullyi 0.00 235516 235516 S 171279 Mycoplasma anatis 0.00 234687 0 S 141391 Candidatus Mycoplasma haemolamae 0.00 234687 234687 S1 1212765 Candidatus Mycoplasma haemolamae str. Purdue 0.00 234509 213560 S 2107 Mycoplasma pulmonis 0.00 20949 20949 S1 272635 Mycoplasma pulmonis UAB CTIP 0.00 224895 224895 S 45361 Mycoplasma conjunctivae 0.00 224643 224643 S 353852 Mycoplasma nasistruthionis 0.00 222931 222931 S 2094 Mycoplasma arginini 0.00 220124 220124 S 29559 Mycoplasma hyosynoviae 0.00 217250 1344 S 51365 Mycoplasma yeatsii 0.00 215906 215906 S1 743967 Mycoplasma yeatsii GM274B 0.00 217236 217236 S 142650 Mycoplasma phocirhinis 0.00 215427 214650 S 2111 Mycoplasma arthritidis 0.00 777 777 S1 243272 Mycoplasma arthritidis 158L3-1 0.00 214924 214924 S 53558 Mycoplasma edwardii 0.00 213215 213215 S 76629 Mycoplasma gallopavonis 0.00 210022 187559 S 2100 Mycoplasma hyorhinis 0.00 14768 14768 S1 872331 Mycoplasma hyorhinis HUB-1 0.00 5864 5864 S1 1118964 Mycoplasma hyorhinis SK76 0.00 917 917 S1 936139 Mycoplasma hyorhinis MCLD 0.00 497 497 S1 1129369 Mycoplasma hyorhinis GDL-1 0.00 417 417 S1 634997 Mycoplasma hyorhinis DBS 1050 0.00 202535 0 S 171632 Mycoplasma ovis 0.00 202535 202535 S1 1415773 Mycoplasma ovis str. Michigan 0.00 199226 199226 S 114885 Mycoplasma maculosum 0.00 198815 174654 S 2097 Mycoplasma genitalium 0.00 7146 7146 S1 662946 Mycoplasma genitalium M6282 0.00 5991 5991 S1 662947 Mycoplasma genitalium M2288 0.00 4676 4676 S1 662945 Mycoplasma genitalium M6320 0.00 4026 4026 S1 663918 Mycoplasma genitalium M2321 0.00 2322 2322 S1 243273 Mycoplasma genitalium G37 0.00 196706 0 S 45362 Mycoplasma bovoculi 0.00 196706 196706 S1 743966 Mycoplasma bovoculi M165/69 0.00 195942 195942 S 33923 Mycoplasma felis 0.00 194606 0 S 65123 Mycoplasma wenyonii 0.00 194606 194606 S1 1197325 Mycoplasma wenyonii str. Massachusetts 0.00 191882 191882 S 2124 Mycoplasma salivarium 0.00 191215 191215 S 142651 Mycoplasma phocidae 0.00 190673 190673 S 92400 Mycoplasma anseris 0.00 179512 179512 S 92401 Mycoplasma cloacale 0.00 177092 0 S 2118 Mycoplasma mobile 0.00 177092 177092 S1 267748 Mycoplasma mobile 163K 0.00 176699 176699 S 2120 Mycoplasma neurolyticum 0.00 175642 175642 S 2121 Mycoplasma orale 0.00 168588 168588 S 45363 Mycoplasma alkalescens 0.00 162434 0 S 2128 Mycoplasma flocculare 0.00 162434 162434 S1 743971 Mycoplasma flocculare ATCC 27399 0.00 160636 160636 S 538220 Mycoplasma struthionis 0.00 159654 159654 S 29561 Mycoplasma meleagridis 0.00 156082 156082 S 142649 Mycoplasma phocicerebrale 0.00 135850 0 S 984991 Mycoplasma parvum 0.00 135850 135850 S1 1403316 Mycoplasma parvum str. Indiana 0.00 135626 135626 S 29554 Mycoplasma canadense 0.00 29188 676 S 2115 Mycoplasma fermentans 0.00 26664 26664 S1 637387 Mycoplasma fermentans JER 0.00 1226 1226 S1 496833 Mycoplasma fermentans PG18 0.00 622 622 S1 943945 Mycoplasma fermentans M64 0.00 452 452 S 51364 Mycoplasma cottewii 0.02 1638049 9651 G 2767358 Mycoplasmopsis 0.01 475410 475410 S 2113 Mycoplasmopsis californica 0.01 461200 461200 S 29556 Mycoplasmopsis gallinacea 0.00 257893 257893 S 171282 Mycoplasmopsis columboralis 0.00 238095 238095 S 171285 Mycoplasmopsis glycophila 0.00 195800 195800 S 114881 Mycoplasmopsis columbina 0.01 451247 52915 G 2129 Ureaplasma 0.00 210979 195646 S 2130 Ureaplasma urealyticum 0.00 15333 0 S1 95664 Ureaplasma urealyticum serovar 10 0.00 15333 15333 S2 565575 Ureaplasma urealyticum serovar 10 str. ATCC 33699 0.00 187353 171831 S 134821 Ureaplasma parvum 0.00 15522 15198 S1 38504 Ureaplasma parvum serovar 3 0.00 281 281 S2 273119 Ureaplasma parvum serovar 3 str. ATCC 700970 0.00 43 43 S2 505682 Ureaplasma parvum serovar 3 str. ATCC 27815 0.00 117396 0 G 295595 Candidatus Hepatoplasma 0.00 117396 0 S 295596 Candidatus Hepatoplasma crinochetorum 0.00 117396 117396 S1 1427984 Candidatus Hepatoplasma crinochetorum Av 0.12 10965969 13035 O 186328 Entomoplasmatales 0.09 8178541 0 F 2131 Spiroplasmataceae 0.09 8178541 813130 G 2132 Spiroplasma 0.01 728133 287193 G1 2637901 unclassified Spiroplasma 0.00 221375 221375 S 216963 Spiroplasma sp. TIUS-1 0.00 219521 219521 S 216964 Spiroplasma sp. BIUS-1 0.00 26 26 S 1914410 Spiroplasma sp. NBRC 100390 0.00 18 18 S 1898044 Spiroplasma sp. TU-14 0.00 435154 435154 S 2139 Spiroplasma clarkii 0.00 357247 357247 S 216932 Spiroplasma chinense 0.00 354988 354988 S 216931 Spiroplasma alleghenense 0.00 322294 322294 S 216938 Spiroplasma helicoides 0.00 313557 313488 S 315358 Spiroplasma eriocheiris 0.00 69 69 S1 743698 Spiroplasma eriocheiris CCTCC M 207170 0.00 305750 0 S 2137 Spiroplasma apis 0.00 305750 305750 S1 1276258 Spiroplasma apis B31 0.00 301116 0 S 216935 Spiroplasma culicicola 0.00 301116 301116 S1 1276246 Spiroplasma culicicola AES-1 0.00 294898 294898 S 216934 Spiroplasma corruscae 0.00 288463 288463 S 2138 Spiroplasma poulsonii 0.00 287538 287538 S 216946 Spiroplasma turonicum 0.00 284130 284130 S 324079 Spiroplasma tabanidicola 0.00 283712 0 S 216944 Spiroplasma sabaudiense 0.00 283712 283712 S1 1276257 Spiroplasma sabaudiense Ar-1343 0.00 278760 0 S 216937 Spiroplasma floricola 0.00 278760 278760 S1 1336749 Spiroplasma floricola 23-6 0.00 270583 270583 S 216942 Spiroplasma litorale 0.00 265990 265990 S 362837 Spiroplasma cantharicola 0.00 259248 259248 S 2143 Spiroplasma gladiatoris 0.00 252872 0 S 216945 Spiroplasma syrphidicola 0.00 252872 252872 S1 1276229 Spiroplasma syrphidicola EA-1 0.00 249436 0 S 216933 Spiroplasma chrysopicola 0.00 249436 249436 S1 1276227 Spiroplasma chrysopicola DF-1 0.00 229530 0 S 2145 Spiroplasma taiwanense 0.00 229530 229530 S1 1276220 Spiroplasma taiwanense CT-1 0.00 219607 0 S 216936 Spiroplasma diminutum 0.00 219607 219607 S1 1276221 Spiroplasma diminutum CUAS-1 0.00 218023 0 S 2136 Spiroplasma monobiae 0.00 218023 218023 S1 1336748 Spiroplasma monobiae MQ-1 0.00 150597 150597 S 2133 Spiroplasma citri 0.00 150086 0 S 47835 Spiroplasma phoeniceum 0.00 150086 150086 S1 1276259 Spiroplasma phoeniceum P40 0.00 139017 0 S 47834 Spiroplasma kunkelii 0.00 139017 139017 S1 273035 Spiroplasma kunkelii CR2-3x 0.00 122569 122569 S 2134 Spiroplasma melliferum 0.00 1848 1848 S 1114980 Spiroplasma atrichopogonis 0.00 265 0 S 2144 Spiroplasma mirum 0.00 265 265 S1 838561 Spiroplasma mirum ATCC 29335 0.03 2774393 23633 F 33925 Entomoplasmataceae 0.02 1799440 153461 G 46239 Mesoplasma 0.01 477914 467761 S 2151 Mesoplasma florum 0.00 10084 10084 S1 265311 Mesoplasma florum L1 0.00 69 69 S1 1406864 Mesoplasma florum W37 0.00 252298 252298 S 225999 Mesoplasma syrphidae 0.00 237826 0 S 138853 Mesoplasma lactucae 0.00 237826 237826 S1 81460 Mesoplasma lactucae ATCC 49193 0.00 197932 197932 S 216427 Mesoplasma chauliocola 0.00 169027 169027 S 219745 Mesoplasma tabanidae 0.00 165127 165127 S 2149 Mesoplasma entomophilum 0.00 145855 145855 S 324078 Mesoplasma coleopterae 0.01 951320 775 G 46238 Entomoplasma 0.00 281553 281553 S 214888 Entomoplasma luminosum 0.00 246641 246641 S 74700 Entomoplasma freundtii 0.00 224430 224430 S 215578 Entomoplasma somnilux 0.00 197921 197921 S 81459 Entomoplasma melaleucae 0.04 3553764 0 O 186329 Acholeplasmatales 0.04 3553764 359 F 2146 Acholeplasmataceae 0.03 2904348 8188 G 2147 Acholeplasma 0.01 564225 564225 S 61635 Acholeplasma brassicae 0.01 515900 515900 S 29552 Acholeplasma axanthum 0.01 484166 484166 S 35623 Acholeplasma oculi 0.01 459993 459203 S 2148 Acholeplasma laidlawii 0.00 790 790 S1 441768 Acholeplasma laidlawii PG-8A 0.00 439947 0 S 38986 Acholeplasma palmae 0.00 439947 439947 S1 1318466 Acholeplasma palmae J233 0.00 431929 431929 S 264636 Acholeplasma hippikon 0.01 649057 4133 G 33926 Candidatus Phytoplasma 0.00 271203 109540 G1 85620 Candidatus Phytoplasma asteris 0.00 105478 0 S 229545 Aster yellows witches'-broom phytoplasma 0.00 105478 105478 S1 322098 Aster yellows witches'-broom phytoplasma AYWB 0.00 26672 26672 S 1193712 'Catharanthus roseus' aster yellows phytoplasma 0.00 21231 21231 S 202462 Maize bushy stunt phytoplasma 0.00 1777 1777 S 100379 Onion yellows phytoplasma 0.00 1524 1524 S 321961 Wheat blue dwarf phytoplasma 0.00 1372 1372 S 619518 Periwinkle leaf yellowing phytoplasma 0.00 1148 1148 S 39647 Paulownia witches'-broom phytoplasma 0.00 652 652 S 389343 Chinaberry witches'-broom phytoplasma 0.00 583 583 S 469009 'Brassica napus' phytoplasma 0.00 535 535 S 35770 Tomato big bud phytoplasma 0.00 483 483 S 167955 'Rehmannia glutinosa' phytoplasma 0.00 208 208 S 35779 Aster yellows phytoplasma 0.00 168253 0 G1 85632 16SrXII (Stolbur group) 0.00 168253 140117 S 59748 Candidatus Phytoplasma australiense 0.00 28136 0 S1 359335 Strawberry lethal yellows phytoplasma (CPA) 0.00 28136 28136 S2 980422 Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 0.00 114857 0 G1 85625 16SrV (Elm yellows group) 0.00 114857 114857 S 135727 Candidatus Phytoplasma ziziphi 0.00 86475 0 G1 85630 16SrX (Apple proliferation group) 0.00 86475 86475 S 37692 Candidatus Phytoplasma mali 0.00 3633 29 G1 85635 unclassified phytoplasmas 0.00 1923 1923 S 37694 Beet leafhopper transmitted virescence phytoplasma 0.00 592 592 S 146897 Rice orange leaf phytoplasma 0.00 570 570 S 137854 Periwinkle little leaf phytoplasma 0.00 519 519 S 2155 Candidatus Phytoplasma sp. 0.00 258 0 G1 85621 16SrII (Peanut WB group) 0.00 258 258 S 35772 Peanut witches'-broom phytoplasma 0.00 245 0 G1 85629 16SrIX (Pigeon pea witches'-broom group) 0.00 245 245 S 37700 Pigeon pea witches'-broom phytoplasma 0.01 1188695 36067 P1 713063 unclassified Tenericutes 0.01 587780 587780 S 1911683 Tenericutes bacterium MZ-XQ 0.01 564848 564848 S 1911684 Tenericutes bacterium MO-XQ 0.01 579688 0 G 1912503 Candidatus Izimaplasma 0.01 579688 0 G1 2624196 unclassified Candidatus Izimaplasma 0.01 579688 579688 S 1541959 Candidatus Izimaplasma sp. HR1 0.36 32314007 0 P 1297 Deinococcus-Thermus 0.36 32314007 11919 C 188787 Deinococci 0.23 21149946 0 O 118964 Deinococcales 0.23 21149946 0 F 183710 Deinococcaceae 0.23 21149946 1266155 G 1298 Deinococcus 0.05 4188061 18972 G1 2623546 unclassified Deinococcus 0.01 1349453 1349453 S 2489213 Deinococcus sp. S14-83 0.01 1165029 1165029 S 2652443 Deinococcus sp. AJ005 0.01 993482 993482 S 2080419 Deinococcus sp. NW-56 0.01 661125 661125 S 2755035 Deinococcus sp. D7000 0.02 1415497 1415497 S 1768108 Deinococcus actinosclerus 0.02 1398200 0 S 432329 Deinococcus peraridilitoris 0.02 1398200 1398200 S1 937777 Deinococcus peraridilitoris DSM 19664 0.02 1387850 985968 S 980427 Deinococcus wulumuqiensis 0.00 401882 401882 S1 1288484 Deinococcus wulumuqiensis R12 0.01 1254395 1254395 S 1211322 Deinococcus metallilatus 0.01 1254288 0 S 502394 Deinococcus gobiensis 0.01 1254288 1254288 S1 745776 Deinococcus gobiensis I-0 0.01 1200551 1200551 S 317577 Deinococcus ficus 0.01 1194411 0 S 310783 Deinococcus deserti 0.01 1194411 1194411 S1 546414 Deinococcus deserti VCD115 0.01 1001929 0 S 309887 Deinococcus maricopensis 0.01 1001929 1001929 S1 709986 Deinococcus maricopensis DSM 21211 0.01 942586 679 S 68909 Deinococcus geothermalis 0.01 941907 941907 S1 319795 Deinococcus geothermalis DSM 11300 0.01 909749 904692 S 1299 Deinococcus radiodurans 0.00 5057 5057 S1 243230 Deinococcus radiodurans R1 0.01 907946 907946 S 1182568 Deinococcus puniceus 0.01 899584 899584 S 2202254 Deinococcus irradiatisoli 0.01 870101 0 S 55148 Deinococcus proteolyticus 0.01 870101 870101 S1 693977 Deinococcus proteolyticus MRP 0.01 687386 687386 S 1309411 Deinococcus soli Cha et al. 2016 0.00 370579 370579 S 1182571 Deinococcus swuensis 0.00 678 0 S 57497 Deinococcus radiopugnans 0.00 678 678 S1 585398 Deinococcus radiopugnans ATCC 19172 0.11 10175741 0 O 68933 Thermales 0.11 10175741 17738 F 188786 Thermaceae 0.07 5912445 864605 G 270 Thermus 0.02 1413527 1134818 S 274 Thermus thermophilus 0.00 115973 115973 S1 762633 Thermus thermophilus SG0.5JP17-16 0.00 87782 87782 S1 798128 Thermus thermophilus JL-18 0.00 72430 72430 S1 300852 Thermus thermophilus HB8 0.00 2524 2524 S1 262724 Thermus thermophilus HB27 0.01 631150 631150 S 56956 Thermus brockianus 0.01 619957 20808 S 271 Thermus aquaticus 0.01 599149 599149 S1 498848 Thermus aquaticus Y51MC23 0.01 608239 0 S 56957 Thermus oshimai 0.01 608239 608239 S1 751945 Thermus oshimai JL-2 0.01 597354 26 G1 2619321 unclassified Thermus 0.01 586244 586244 S 1111069 Thermus sp. CCB_US3_UF1 0.00 5725 5725 S 1312524 Thermus sp. WG 0.00 5359 5359 S 446041 Thermus sp. 4C 0.01 541320 541320 S 2483360 Thermus caldilimi 0.01 512062 0 S 37636 Thermus scotoductus 0.01 512062 512062 S1 743525 Thermus scotoductus SA-01 0.00 124231 124231 S 456163 Thermus parvatiensis 0.03 2827045 177558 G 65551 Meiothermus 0.01 1083435 0 S 52022 Meiothermus silvanus 0.01 1083435 1083435 S1 526227 Meiothermus silvanus DSM 9946 0.01 794475 0 S 277 Meiothermus ruber 0.01 794475 794475 S1 504728 Meiothermus ruber DSM 1279 0.01 771577 0 S 172827 Meiothermus taiwanensis 0.01 771577 771577 S1 1339250 Meiothermus taiwanensis WR-220 0.01 738796 0 G 208447 Oceanithermus 0.01 738796 0 S 187137 Oceanithermus profundus 0.01 738796 738796 S1 670487 Oceanithermus profundus DSM 14977 0.01 679717 0 G 186191 Marinithermus 0.01 679717 0 S 186192 Marinithermus hydrothermalis 0.01 679717 679717 S1 869210 Marinithermus hydrothermalis DSM 14884 0.01 976401 0 O 2762275 Trueperales 0.01 976401 0 F 332247 Trueperaceae 0.01 976401 0 G 332248 Truepera 0.01 976401 0 S 332249 Truepera radiovictrix 0.01 976401 976401 S1 649638 Truepera radiovictrix DSM 17093 0.26 23902134 2234 P 200795 Chloroflexi 0.07 6571990 0 C 32061 Chloroflexia 0.07 6571990 13165 O 32064 Chloroflexales 0.04 3462482 0 O1 1508595 Roseiflexineae 0.04 3462482 0 F 1508635 Roseiflexaceae 0.04 3462482 15363 G 120961 Roseiflexus 0.02 1745863 0 G1 2609473 unclassified Roseiflexus 0.02 1745863 1745863 S 357808 Roseiflexus sp. RS-1 0.02 1701256 0 S 120962 Roseiflexus castenholzii 0.02 1701256 1701256 S1 383372 Roseiflexus castenholzii DSM 13941 0.03 3096343 0 O1 1508594 Chloroflexineae 0.03 3096343 0 F 1106 Chloroflexaceae 0.03 3096343 4407 G 1107 Chloroflexus 0.02 1646788 1636862 S 1108 Chloroflexus aurantiacus 0.00 6153 6153 S1 480224 Chloroflexus aurantiacus Y-400-fl 0.00 3773 3773 S1 324602 Chloroflexus aurantiacus J-10-fl 0.02 1445148 0 S 152260 Chloroflexus aggregans 0.02 1445148 1445148 S1 326427 Chloroflexus aggregans DSM 9485 0.04 3991904 0 C 292625 Anaerolineae 0.04 3991904 0 O 292629 Anaerolineales 0.04 3991904 511 F 292628 Anaerolineaceae 0.01 1121920 0 G 1649478 Pelolinea 0.01 1121920 1121920 S 913107 Pelolinea submarina 0.01 1120705 0 G 233189 Anaerolinea 0.01 1120705 0 S 167964 Anaerolinea thermophila 0.01 1120705 1120705 S1 926569 Anaerolinea thermophila UNI-1 0.01 920166 0 F1 1324991 unclassified Anaerolineaceae 0.01 920166 920166 S 1889813 Anaerolineaceae bacterium oral taxon 439 0.01 828602 0 G 2019482 Brevefilum 0.01 828602 828602 S 1986204 Brevefilum fermentans 0.04 3613397 0 C 388447 Ktedonobacteria 0.04 3613397 0 O 388448 Ktedonobacterales 0.04 3613397 0 F 2692416 Ktedonosporobacteraceae 0.04 3613397 0 G 2692417 Ktedonosporobacter 0.04 3613397 3613397 S 2509675 Ktedonosporobacter rubrisoli 0.04 3566288 1360 C 301297 Dehalococcoidia 0.03 2401868 0 O 1202465 Dehalococcoidales 0.03 2401868 0 F 1202464 Dehalococcoidaceae 0.03 2401868 412914 G 61434 Dehalococcoides 0.02 1929058 1356813 S 61435 Dehalococcoides mccartyi 0.00 114409 114409 S1 311424 Dehalococcoides mccartyi VS 0.00 106201 106201 S1 243164 Dehalococcoides mccartyi 195 0.00 103070 103070 S1 1432060 Dehalococcoides mccartyi CG4 0.00 47367 47367 S1 216389 Dehalococcoides mccartyi BAV1 0.00 40276 40276 S1 1388758 Dehalococcoides mccartyi GY50 0.00 33884 33884 S1 1193807 Dehalococcoides mccartyi DCMB5 0.00 32248 32248 S1 1432059 Dehalococcoides mccartyi CG1 0.00 26924 26924 S1 1407653 Dehalococcoides mccartyi IBARAKI 0.00 26105 26105 S1 1193806 Dehalococcoides mccartyi BTF08 0.00 19996 19996 S1 255470 Dehalococcoides mccartyi CBDB1 0.00 13377 13377 S1 1432061 Dehalococcoides mccartyi CG5 0.00 8388 8388 S1 633145 Dehalococcoides mccartyi GT 0.00 59896 0 G1 237581 unclassified Dehalococcoides 0.00 59896 59896 S 1522671 Dehalococcoides sp. UCH007 0.01 1163060 1222 G 670486 Dehalogenimonas 0.01 659485 659485 S 1839801 Dehalogenimonas formicexedens 0.01 502353 0 S 552810 Dehalogenimonas lykanthroporepellens 0.01 502353 502353 S1 552811 Dehalogenimonas lykanthroporepellens BL-DC-9 0.02 2176395 355 C 189775 Thermomicrobia 0.01 1247468 0 C1 85000 Sphaerobacteridae 0.01 1247468 0 O 85001 Sphaerobacterales 0.01 1247468 0 O1 255728 Sphaerobacterineae 0.01 1247468 0 F 85002 Sphaerobacteraceae 0.01 1247468 0 G 2056 Sphaerobacter 0.01 1247468 0 S 2057 Sphaerobacter thermophilus 0.01 1247468 1247468 S1 479434 Sphaerobacter thermophilus DSM 20745 0.01 928572 0 O 189776 Thermomicrobiales 0.01 928572 0 F 189777 Thermomicrobiaceae 0.01 928572 0 G 499 Thermomicrobium 0.01 928572 0 S 500 Thermomicrobium roseum 0.01 928572 928572 S1 309801 Thermomicrobium roseum DSM 5159 0.02 1612594 0 C 475962 Caldilineae 0.02 1612594 0 O 475963 Caldilineales 0.02 1612594 0 F 475964 Caldilineaceae 0.02 1612594 0 G 233191 Caldilinea 0.02 1612594 0 S 133453 Caldilinea aerophila 0.02 1612594 1612594 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.02 1536401 0 C 1382928 Ardenticatenia 0.02 1536401 0 O 1382929 Ardenticatenales 0.02 1536401 0 F 1382930 Ardenticatenaceae 0.02 1536401 0 G 1988031 Candidatus Promineofilum 0.02 1536401 1536401 S 1806508 Candidatus Promineofilum breve 0.01 830931 0 C 2682225 Tepidiformia 0.01 830931 0 O 2682226 Tepidiformales 0.01 830931 0 F 2682227 Tepidiformaceae 0.01 830931 0 G 2682228 Tepidiforma 0.01 830931 830931 S 2601677 Tepidiforma bonchosmolovskayae 0.05 4577840 460 P 67819 Armatimonadetes 0.02 1795654 353 P1 1042316 unclassified Armatimonadetes 0.01 959771 959771 S 2004467 Armatimonadetes bacterium Uphvl-Ar1 0.01 835530 835530 S 2004468 Armatimonadetes bacterium Uphvl-Ar2 0.02 1673754 0 C 1663419 Fimbriimonadia 0.02 1673754 0 O 1663425 Fimbriimonadales 0.02 1673754 0 F 1663426 Fimbriimonadaceae 0.02 1673754 0 G 1005038 Fimbriimonas 0.02 1673754 0 S 1005039 Fimbriimonas ginsengisoli 0.02 1673754 1673754 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 0.01 1107972 0 C 1077257 Chthonomonadetes 0.01 1107972 0 O 1077263 Chthonomonadales 0.01 1107972 0 F 1077264 Chthonomonadaceae 0.01 1107972 0 G 1077265 Chthonomonas 0.01 1107972 0 S 454171 Chthonomonas calidirosea 0.01 1107972 1107972 S1 1303518 Chthonomonas calidirosea T49 0.01 997095 0 D2 1859062 unclassified Terrabacteria group 0.01 997095 0 G 262406 Thermobaculum 0.01 997095 0 S 166501 Thermobaculum terrenum 0.01 997095 997095 S1 525904 Thermobaculum terrenum ATCC BAA-798 7.32 660688808 3819 D1 1783270 FCB group 7.22 651095342 11563 D2 68336 Bacteroidetes/Chlorobi group 7.05 635783066 702382 P 976 Bacteroidetes 3.00 270852430 0 C 117743 Flavobacteriia 3.00 270852430 355670 O 200644 Flavobacteriales 2.14 192846081 1786889 F 49546 Flavobacteriaceae 0.43 38965717 793929 G 237 Flavobacterium 0.13 11895765 47424 G1 196869 unclassified Flavobacterium 0.02 1594698 1594698 S 1179672 Flavobacterium sp. KBS0721 0.02 1486680 1486680 S 2294119 Flavobacterium sp. CJ74 0.02 1360446 1360446 S 2478552 Flavobacterium sp. 140616W15 0.01 1248158 1248158 S 2739062 Flavobacterium sp. M31R6 0.01 1241896 1241896 S 2249356 Flavobacterium sp. HYN0086 0.01 1156827 1156827 S 2748320 Flavobacterium sp. P2-65 0.01 1060480 1060480 S 935222 Flavobacterium sp. Sr18 0.01 921245 921245 S 2748319 Flavobacterium sp. I3-2 0.01 914497 914497 S 2614441 Flavobacterium sp. LPB0248 0.01 850516 850516 S 2654325 Flavobacterium sp. xlx-214 0.00 12281 12281 S 408956 Flavobacterium sp. KI723T1 0.00 617 617 S 932218 Flavobacterium sp. KP1 0.02 2231076 1535361 S 986 Flavobacterium johnsoniae 0.01 695715 695715 S1 376686 Flavobacterium johnsoniae UW101 0.02 1820852 1820852 S 459526 Flavobacterium anhuiense 0.02 1794489 1727090 S 996 Flavobacterium columnare 0.00 67399 67399 S1 1041826 Flavobacterium columnare ATCC 49512 0.02 1513087 1513087 S 2183896 Flavobacterium crocinum 0.01 1330026 1330026 S 1355330 Flavobacterium faecale 0.01 1270981 1270981 S 1617283 Flavobacterium nitrogenifigens 0.01 1233064 1233064 S 2175091 Flavobacterium album 0.01 1217809 1217809 S 2547394 Flavobacterium nackdongense 0.01 1215396 1215396 S 1492737 Flavobacterium gilvum 0.01 1198231 1198231 S 1678728 Flavobacterium kingsejongi 0.01 1194794 1194794 S 2602769 Flavobacterium alkalisoli 0.01 1067761 1067761 S 2172098 Flavobacterium pallidum 0.01 1064864 1064864 S 1306519 Flavobacterium commune 0.01 1040478 1040478 S 2162713 Flavobacterium magnum 0.01 964802 964802 S 2201181 Flavobacterium sediminis 0.01 950717 931382 S 96345 Flavobacterium psychrophilum 0.00 9229 9229 S1 1452724 Flavobacterium psychrophilum FPG3 0.00 8460 8460 S1 1452725 Flavobacterium psychrophilum FPG101 0.00 1646 1646 S1 402612 Flavobacterium psychrophilum JIP02/86 0.01 937174 0 S 55197 Flavobacterium branchiophilum 0.01 937174 937174 S1 1034807 Flavobacterium branchiophilum FL-15 0.01 919565 919565 S 2518177 Flavobacterium sangjuense 0.01 885537 885537 S 1784713 Flavobacterium arcticum 0.01 821900 0 S 312277 Flavobacterium indicum 0.01 821900 821900 S1 1094466 Flavobacterium indicum GPTSA100-9 = DSM 17447 0.01 814957 814957 S 1763534 Flavobacterium crassostreae 0.01 788463 788463 S 683124 Flavobacterium haoranii 0.13 11442134 1586594 G 1016 Capnocytophaga 0.03 2938743 707982 G1 2640652 unclassified Capnocytophaga 0.01 782677 782677 S 1316596 Capnocytophaga sp. oral taxon 878 0.00 431899 431899 S 2545799 Capnocytophaga sp. FDAARGOS_737 0.00 239957 239957 S 1316593 Capnocytophaga sp. oral taxon 864 0.00 227893 227893 S 2748316 Capnocytophaga sp. oral taxon 902 0.00 201479 201479 S 1705617 Capnocytophaga sp. oral taxon 323 0.00 175117 175117 S 1945657 Capnocytophaga sp. H2931 0.00 171739 171739 S 1945658 Capnocytophaga sp. H4358 0.01 1353141 1284779 S 28188 Capnocytophaga canimorsus 0.00 68362 68362 S1 860228 Capnocytophaga canimorsus Cc5 0.01 1340833 1340833 S 1019 Capnocytophaga sputigena 0.01 813212 813212 S 45243 Capnocytophaga haemolytica 0.01 804781 804781 S 1017 Capnocytophaga gingivalis 0.01 747530 747530 S 1848904 Capnocytophaga stomatis 0.01 624188 624188 S 28189 Capnocytophaga cynodegmi 0.01 599043 599043 S 2708117 Capnocytophaga endodontalis 0.00 399884 399884 S 327575 Capnocytophaga leadbetteri 0.00 234185 0 S 1018 Capnocytophaga ochracea 0.00 234185 234185 S1 521097 Capnocytophaga ochracea DSM 7271 0.12 11081934 103444 G 52959 Polaribacter 0.10 8911589 594958 G1 196858 unclassified Polaribacter 0.01 1074879 1074879 S 2686361 Polaribacter sp. L3A8 0.01 1025761 1025761 S 1312072 Polaribacter sp. SA4-12 0.01 998453 998453 S 1855336 Polaribacter sp. KT25b 0.01 930229 930229 S 2058137 Polaribacter sp. ALD11 0.01 890637 890637 S 2738844 Polaribacter sp. L12M9 0.01 888710 888710 S 754397 Polaribacter sp. SA4-10 0.01 850985 850985 S 1336804 Polaribacter sp. Hel1_33_78 0.01 821657 821657 S 313598 Polaribacter sp. MED152 0.00 424156 424156 S 1529069 Polaribacter sp. BM10 0.00 411164 411164 S 1896175 Polaribacter sp. KT 15 0.01 1076910 1076910 S 996801 Polaribacter reichenbachii 0.01 989991 989991 S 1774273 Polaribacter vadi 0.09 8513352 36482 G 286104 Winogradskyella 0.08 7432917 1396247 G1 2615021 unclassified Winogradskyella 0.01 1304225 1304225 S 2697009 Winogradskyella sp. Z354 0.01 1112670 1112670 S 754409 Winogradskyella sp. PG-2 0.01 1096012 1096012 S 2686078 Winogradskyella sp. Z215 0.01 978437 978437 S 1936080 Winogradskyella sp. J14-2 0.01 856804 856804 S 754417 Winogradskyella sp. PC-19 0.01 681224 681224 S 2697011 Winogradskyella sp. SW133 0.00 5043 5043 S 2686077 Winogradskyella sp. HL857 0.00 2255 2255 S 2697012 Winogradskyella sp. HL6110 0.01 1043953 1043953 S 1382466 Winogradskyella sediminis 0.09 8423512 691702 G 363408 Nonlabens 0.05 4450451 157174 G1 2615035 unclassified Nonlabens 0.01 1040001 1040001 S 2608253 Nonlabens sp. Ci31 0.01 1000751 1000751 S 1336802 Nonlabens sp. Hel1_33_55 0.01 880941 880941 S 2496866 Nonlabens sp. MJ115 0.01 879815 879815 S 2058134 Nonlabens sp. MB-3u-79 0.00 288713 288713 S 2719911 Nonlabens sp. SY33080 0.00 203056 203056 S 1476901 Nonlabens sp. MIC269 0.01 1164671 0 S 328515 Nonlabens dokdonensis 0.01 1164671 1164671 S1 592029 Nonlabens dokdonensis DSW-6 0.01 1025461 1025461 S 331648 Nonlabens spongiae 0.01 889159 0 S 930802 Nonlabens marinus 0.01 889159 889159 S1 1454201 Nonlabens marinus S1-08 0.00 202068 202068 S 319236 Nonlabens sediminis 0.09 7821525 1008 F1 61432 unclassified Flavobacteriaceae 0.02 1496095 1496095 S 2584122 Flavobacteriaceae bacterium 10Alg115 0.02 1473208 1473208 S 2583587 Flavobacteriaceae bacterium F202Z8 0.01 1162400 1162400 S 1250295 Flavobacteriaceae bacterium MAR_2010_188 0.01 1025646 1025646 S 2744027 Flavobacteriaceae bacterium RR4-40 0.01 957704 957704 S 1871037 Flavobacteriaceae bacterium 0.01 875204 875204 S 1150389 Flavobacteriaceae bacterium UJ101 0.01 830260 830260 S 531844 Flavobacteriaceae bacterium 3519-10 0.08 6957866 825884 G 252356 Maribacter 0.05 4204853 7400 G1 2615042 unclassified Maribacter 0.01 1266713 1266713 S 1836467 Maribacter sp. T28 0.01 1212129 1212129 S 2496865 Maribacter sp. MJ134 0.01 1192476 1192476 S 313603 Maribacter sp. HTCC2170 0.01 526135 526135 S 1644130 Maribacter sp. 1_2014MBL_MicDiv 0.02 1371797 1371797 S 1178778 Maribacter cobaltidurans 0.01 555332 555332 S 320912 Maribacter dokdonensis 0.08 6797028 229706 G 104267 Tenacibaculum 0.02 1922261 684 G1 2635139 unclassified Tenacibaculum 0.01 1138201 1138201 S 754423 Tenacibaculum sp. SZ-18 0.01 783376 783376 S 2358479 Tenacibaculum sp. DSM 106434 0.01 1301794 1301794 S 584609 Tenacibaculum jejuense 0.01 1093044 912469 S 107401 Tenacibaculum maritimum 0.00 180575 180575 S1 1349785 Tenacibaculum maritimum NCIMB 2154 0.01 790777 790777 S 1850252 Tenacibaculum todarodis 0.01 736581 736581 S 669041 Tenacibaculum dicentrarchi 0.01 722865 722865 S 104268 Tenacibaculum mesophilum 0.07 6685079 0 G 290174 Aquimarina 0.07 6685079 38538 G1 2627091 unclassified Aquimarina 0.02 1784484 1784484 S 1714849 Aquimarina sp. AD10 0.02 1737269 1737269 S 1714860 Aquimarina sp. BL5 0.02 1564690 1564690 S 1714848 Aquimarina sp. AD1 0.02 1560098 1560098 S 2736252 Aquimarina sp. TRL1 0.07 6551816 61485 G 292691 Gramella 0.01 1310112 1310112 S 2126553 Gramella fulva 0.01 1215917 0 S 1486245 Gramella flava 0.01 1215917 1215917 S1 1229726 Gramella flava JLT2011 0.01 1106398 0 S 411153 Gramella forsetii 0.01 1106398 1106398 S1 411154 Gramella forsetii KT0803 0.01 1041388 1041388 S 279359 Gramella echinicola 0.01 923221 0 G1 2615027 unclassified Gramella 0.01 923221 923221 S 1250205 Gramella sp. MAR_2010_147 0.01 893295 893295 S 1913577 Gramella salexigens 0.07 5977965 244567 G 104264 Cellulophaga 0.02 1758672 712008 S 76594 Cellulophaga baltica 0.01 541998 541998 S1 1348584 Cellulophaga baltica 18 0.01 504666 504666 S1 1348585 Cellulophaga baltica NN016038 0.02 1439187 1350124 S 979 Cellulophaga lytica 0.00 89063 89063 S1 867900 Cellulophaga lytica DSM 7489 0.01 1274679 0 G1 2634405 unclassified Cellulophaga 0.01 1274679 1274679 S 2686362 Cellulophaga sp. L1A9 0.01 1260860 0 S 59600 Cellulophaga algicola 0.01 1260860 1260860 S1 688270 Cellulophaga algicola DSM 14237 0.07 5969627 1325438 G 76831 Myroides 0.02 1452221 42980 G1 2642485 unclassified Myroides 0.01 1035323 1035323 S 2572594 Myroides sp. CJ210 0.00 195933 195933 S 1583100 Myroides sp. A21 0.00 177985 177985 S 1458492 Myroides sp. ZB35 0.01 1187724 0 S 256 Myroides odoratus 0.01 1187724 1187724 S1 929704 Myroides odoratus DSM 2801 0.01 889983 889983 S 702745 Myroides phaeus 0.01 654671 654671 S 480520 Myroides profundi 0.01 459590 459590 S 76832 Myroides odoratimimus 0.06 5725793 44770 G 225842 Formosa 0.04 3374210 1158 G1 2644710 unclassified Formosa 0.01 1040649 1040649 S 2686363 Formosa sp. L2A11 0.01 925049 925049 S 1798225 Formosa sp. Hel1_31_208 0.01 812815 812815 S 1336794 Formosa sp. Hel1_33_131 0.01 594539 594539 S 1336795 Formosa sp. Hel3_A1_48 0.01 1207272 0 S 320324 Formosa agariphila 0.01 1207272 1207272 S1 1347342 Formosa agariphila KMM 3901 0.01 1099541 1099541 S 2594004 Formosa sediminum 0.05 4145342 439228 G 326319 Dokdonia 0.03 3148814 424057 G1 2615033 unclassified Dokdonia 0.01 749930 749930 S 1239415 Dokdonia sp. PRO95 0.01 747645 747645 S 2173169 Dokdonia sp. Dokd-P16 0.01 670126 670126 S 983548 Dokdonia sp. 4H-3-7-5 0.01 557056 557056 S 313590 Dokdonia sp. MED134 0.01 557300 0 S 326320 Dokdonia donghaensis 0.01 557300 557300 S1 1300343 Dokdonia donghaensis DSW-1 0.04 3682973 2934 G 261827 Algibacter 0.03 2558778 82823 G1 2615009 unclassified Algibacter 0.01 1242823 1242823 S 2686366 Algibacter sp. L3A6 0.01 1233132 1233132 S 2686365 Algibacter sp. L1A34 0.01 1121261 1121261 S 1736674 Algibacter alginicilyticus 0.04 3596074 21968 G 111500 Muricauda 0.02 1384682 0 G1 2615049 unclassified Muricauda 0.02 1384682 1384682 S 2698672 Muricauda sp. 501str8 0.01 1179683 0 S 111501 Muricauda ruestringensis 0.01 1179683 1179683 S1 886377 Muricauda ruestringensis DSM 13258 0.01 1009741 1009741 S 516051 Muricauda lutaonensis 0.04 3188147 10878 G 221065 Kordia 0.02 1603787 0 G1 2685202 unclassified Kordia 0.02 1603787 1603787 S 2282170 Kordia sp. SMS9 0.02 1573482 1573482 S 1218801 Kordia antarctica 0.03 2736630 25608 G 291183 Lacinutrix 0.02 1874835 3984 G1 2647285 unclassified Lacinutrix 0.01 1011497 1011497 S 2057808 Lacinutrix sp. Bg11-31 0.01 859354 859354 S 983544 Lacinutrix sp. 5H-3-7-4 0.01 836187 836187 S 1486034 Lacinutrix venerupis 0.03 2344996 5083 G 2058174 Antarcticibacterium 0.01 1293056 1293056 S 2058175 Antarcticibacterium flavum 0.01 1046857 0 G1 2631190 unclassified Antarcticibacterium 0.01 1046857 1046857 S 2585771 Antarcticibacterium sp. PAMC 28998 0.03 2280063 86576 G 143222 Salegentibacter 0.01 1109440 0 G1 2633436 unclassified Salegentibacter 0.01 1109440 1109440 S 1729720 Salegentibacter sp. T436 0.01 1084047 1084047 S 143223 Salegentibacter salegens 0.02 2163371 1630 G 153265 Aequorivita 0.01 1109074 0 G1 2615031 unclassified Aequorivita 0.01 1109074 1109074 S 2494375 Aequorivita sp. H23M31 0.01 1052667 0 S 101385 Aequorivita sublithincola 0.01 1052667 1052667 S1 746697 Aequorivita sublithincola DSM 14238 0.02 1949675 5143 G 336276 Olleya 0.01 1017485 0 G1 2615019 unclassified Olleya 0.01 1017485 1017485 S 2058135 Olleya sp. Bg11-27 0.01 927047 927047 S 639310 Olleya aquimaris 0.02 1781389 0 G 178469 Arenibacter 0.02 1781389 1781389 S 616991 Arenibacter algicola 0.02 1714180 0 G 112040 Zobellia 0.02 1714180 1714180 S 63186 Zobellia galactanivorans 0.02 1678682 0 G 1209327 Flavivirga 0.02 1678682 1678682 S 1803846 Flavivirga eckloniae 0.02 1492673 0 G 417127 Zunongwangia 0.02 1492673 0 S 398743 Zunongwangia profunda 0.02 1492673 1492673 S1 655815 Zunongwangia profunda SM-A87 0.02 1425063 0 G 1287916 Euzebyella 0.02 1425063 1425063 S 1761453 Euzebyella marina 0.02 1401725 0 G 527198 Mariniflexile 0.02 1401725 0 G1 2643887 unclassified Mariniflexile 0.02 1401725 1401725 S 2027857 Mariniflexile sp. TRM1-10 0.01 1243028 0 G 83612 Psychroflexus 0.01 1243028 0 S 57029 Psychroflexus torquis 0.01 1243028 1243028 S1 313595 Psychroflexus torquis ATCC 700755 0.01 1241513 0 G 283735 Leeuwenhoekiella 0.01 1241513 0 G1 2615029 unclassified Leeuwenhoekiella 0.01 1241513 1241513 S 2719912 Leeuwenhoekiella sp. ZYFB001 0.01 1202031 0 G 2049301 Changchengzhania 0.01 1202031 1202031 S 2049305 Changchengzhania lutea 0.01 1178104 0 G 343334 Costertonia 0.01 1178104 1178104 S 343403 Costertonia aggregata 0.01 1146540 0 G 444459 Flagellimonas 0.01 1146540 1146540 S 1383885 Flagellimonas maritima 0.01 1133380 0 G 252306 Robiginitalea 0.01 1133380 0 S 252307 Robiginitalea biformata 0.01 1133380 1133380 S1 313596 Robiginitalea biformata HTCC2501 0.01 1121901 0 G 393005 Tamlana 0.01 1121901 0 G1 2614803 unclassified Tamlana 0.01 1121901 1121901 S 2069432 Tamlana sp. UJ94 0.01 1116129 0 G 379068 Galbibacter 0.01 1116129 0 G1 2632773 unclassified Galbibacter 0.01 1116129 1116129 S 1170699 Galbibacter sp. BG1 0.01 1094198 0 G 389486 Sediminicola 0.01 1094198 0 G1 2648869 unclassified Sediminicola 0.01 1094198 1094198 S 1453352 Sediminicola sp. YIK13 0.01 1049243 0 G 1649495 Seonamhaeicola 0.01 1049243 0 G1 2622645 unclassified Seonamhaeicola 0.01 1049243 1049243 S 1936081 Seonamhaeicola sp. S2-3 0.01 1032803 0 G 244698 Gillisia 0.01 1032803 0 G1 2615025 unclassified Gillisia 0.01 1032803 1032803 S 1336796 Gillisia sp. Hel1_33_143 0.01 1012380 0 G 49277 Psychroserpens 0.01 1012380 0 G1 2615011 unclassified Psychroserpens 0.01 1012380 1012380 S 2570561 Psychroserpens sp. NJDZ02 0.01 992428 0 G 1176327 Aureitalea 0.01 992428 0 G1 2636237 unclassified Aureitalea 0.01 992428 992428 S 2094025 Aureitalea sp. RR4-38 0.01 986864 0 G 1518147 Wenyingzhuangia 0.01 986864 986864 S 1790137 Wenyingzhuangia fucanilytica 0.01 978969 0 G 2045416 Oceanihabitans 0.01 978969 0 G1 2631961 unclassified Oceanihabitans 0.01 978969 978969 S 2529032 Oceanihabitans sp. IOP_32 0.01 974124 0 G 379070 Gilvibacter 0.01 974124 0 G1 2625242 unclassified Gilvibacter 0.01 974124 974124 S 754429 Gilvibacter sp. SZ-19 0.01 963769 0 G 762641 Muriicola 0.01 963769 0 G1 2647561 unclassified Muriicola 0.01 963769 963769 S 2507538 Muriicola sp. MMS17-SY002 0.01 937192 0 G 2700084 Urechidicola 0.01 937192 937192 S 1850246 Urechidicola croceus 0.01 926112 0 G 1204360 Siansivirga 0.01 926112 0 S 762954 Siansivirga zeaxanthinifaciens 0.01 926112 926112 S1 1454006 Siansivirga zeaxanthinifaciens CC-SAMT-1 0.01 918209 0 G 1535231 Altibacter 0.01 918209 0 G1 2685783 unclassified Altibacter 0.01 918209 918209 S 2562285 Altibacter sp. ALE3EI 0.01 887766 0 G 216431 Croceibacter 0.01 887766 0 S 313588 Croceibacter atlanticus 0.01 887766 887766 S1 216432 Croceibacter atlanticus HTCC2559 0.01 842631 0 G 444051 Mesoflavibacter 0.01 842631 842447 G1 2630131 unclassified Mesoflavibacter 0.00 93 93 S 2109944 Mesoflavibacter sp. HG96 0.00 91 91 S 2109943 Mesoflavibacter sp. HG37 0.01 810682 0 G 358023 Lutibacter 0.01 810682 810682 S 1622118 Lutibacter profundi 0.01 774865 0 G 2715289 Amniculibacterium 0.01 774865 0 G1 2767187 unclassified Amniculibacterium 0.01 774865 774865 S 2767188 Amniculibacterium sp. G2-70 0.76 68348258 236107 F 2762318 Weeksellaceae 0.55 49787337 2782454 G 59732 Chryseobacterium 0.19 17399458 640162 G1 2593645 unclassified Chryseobacterium 0.02 1371074 1371074 S 2015076 Chryseobacterium sp. T16E-39 0.01 1346324 1346324 S 878220 Chryseobacterium sp. StRB126 0.01 1272508 1272508 S 1932669 Chryseobacterium sp. JV274 0.01 1214428 1214428 S 2478663 Chryseobacterium sp. 3008163 0.01 1200369 1200369 S 2487064 Chryseobacterium sp. G0186 0.01 1139617 1139617 S 2487065 Chryseobacterium sp. G0201 0.01 1093951 1093951 S 1721091 Chryseobacterium sp. IHB B 17019 0.01 897688 897688 S 2724619 Chryseobacterium sp. NEB161 0.01 884079 884079 S 2547600 Chryseobacterium sp. NBC 122 0.01 880221 880221 S 2713414 Chryseobacterium sp. POL2 0.01 867761 867761 S 2487063 Chryseobacterium sp. G0162 0.01 841814 841814 S 2594269 Chryseobacterium sp. SNU WT5 0.01 797203 797203 S 1871047 Chryseobacterium sp. 0.01 765843 765843 S 2758037 Chryseobacterium sp. cx-624 0.01 745950 745950 S 2039166 Chryseobacterium sp. 6424 0.01 700747 700747 S 2487073 Chryseobacterium sp. H3001 0.00 374844 374844 S 2487072 Chryseobacterium sp. H6466 0.00 364875 364875 S 2487071 Chryseobacterium sp. F5649 0.04 3292730 3292730 S 253 Chryseobacterium indologenes 0.02 1676885 1676885 S 250 Chryseobacterium gleum 0.02 1612110 1612110 S 1324352 Chryseobacterium gallinarum 0.02 1609427 1609427 S 254 Chryseobacterium indoltheticum 0.02 1546437 1546437 S 1493872 Chryseobacterium shandongense 0.02 1525804 1525804 S 1241978 Chryseobacterium bernardetii 0.02 1452982 1452982 S 1241981 Chryseobacterium lactis 0.02 1442792 1442792 S 1124835 Chryseobacterium carnipullorum 0.02 1432749 1432749 S 536441 Chryseobacterium taklimakanense 0.02 1393991 1393991 S 651561 Chryseobacterium arthrosphaerae 0.01 1279708 1279708 S 2497456 Chryseobacterium aureum 0.01 1272366 1272366 S 1265445 Chryseobacterium camelliae 0.01 1216677 1216677 S 558152 Chryseobacterium piperi 0.01 1184419 1184419 S 112234 Chryseobacterium joostei 0.01 1167718 1167718 S 1685010 Chryseobacterium glaciei 0.01 1141477 1141477 S 246 Chryseobacterium balustinum 0.01 973565 973565 S 1141221 Chryseobacterium taihuense 0.01 944277 944277 S 1241982 Chryseobacterium nakagawai 0.01 925795 925795 S 266749 Chryseobacterium jeonii 0.01 907922 907922 S 266748 Chryseobacterium antarcticum 0.01 883132 883132 S 1241979 Chryseobacterium carnis 0.01 722462 722462 S 421525 Chryseobacterium haifense 0.10 9263801 1934442 G 308865 Elizabethkingia 0.03 2572476 2398290 S 1117645 Elizabethkingia anophelis 0.00 91195 91195 S1 1352940 Elizabethkingia anophelis FMS-007 0.00 82830 82830 S1 1338011 Elizabethkingia anophelis NUHP1 0.00 141 141 S1 1246994 Elizabethkingia anophelis R26 0.00 20 20 S1 1117646 Elizabethkingia anophelis Ag1 0.02 1428537 1428537 S 238 Elizabethkingia meningoseptica 0.01 1171455 50 G1 2685307 unclassified Elizabethkingia 0.01 778913 778913 S 2583851 Elizabethkingia sp. JS20170427COW 0.00 392492 392492 S 2575699 Elizabethkingia sp. 2-6 0.01 1097915 1097915 S 172045 Elizabethkingia miricola 0.01 760970 760970 S 1756150 Elizabethkingia ursingii 0.00 298006 298006 S 1756149 Elizabethkingia bruuniana 0.03 2446163 46948 G 59734 Empedobacter 0.02 1384159 1384159 S 247 Empedobacter brevis 0.01 1015056 1015056 S 343874 Empedobacter falsenii 0.02 1817106 1813 G 1778601 Apibacter 0.01 918761 918761 S 2500547 Apibacter raozihei 0.01 896532 354582 G1 2630820 unclassified Apibacter 0.00 274828 274828 S 2656761 Apibacter sp. B2966 0.00 267122 267122 S 2656760 Apibacter sp. B3706 0.02 1614256 0 G 34084 Riemerella 0.02 1614256 1574144 S 34085 Riemerella anatipestifer 0.00 24194 24194 S1 1228997 Riemerella anatipestifer RA-CH-1 0.00 6666 6666 S1 1271752 Riemerella anatipestifer RA-CH-2 0.00 4984 4984 S1 1455062 Riemerella anatipestifer Yb2 0.00 4115 4115 S1 1354240 Riemerella anatipestifer CH3 0.00 153 153 S1 693978 Riemerella anatipestifer ATCC 11845 = DSM 15868 0.01 1171417 0 G 28250 Ornithobacterium 0.01 1171417 1152763 S 28251 Ornithobacterium rhinotracheale 0.00 15059 15059 S1 867902 Ornithobacterium rhinotracheale DSM 15997 0.00 3595 3595 S1 1401325 Ornithobacterium rhinotracheale ORT-UMN 88 0.01 750663 0 G 501783 Cloacibacterium 0.01 750663 750663 S 237258 Cloacibacterium normanense 0.01 655240 0 G 1013 Weeksella 0.01 655240 655024 S 1014 Weeksella virosa 0.00 216 216 S1 865938 Weeksella virosa DSM 16922 0.01 606168 0 G 59735 Bergeyella 0.01 606168 606168 S 1585976 Bergeyella cardium 0.06 5697464 0 F 39782 Blattabacteriaceae 0.06 5697464 410596 G 34098 Blattabacterium 0.05 4441817 4308698 S 1653831 Blattabacterium cuenoti 0.00 84936 84936 S1 1457030 Blattabacterium cuenoti STAT 0.00 24147 24147 S1 1457031 Blattabacterium cuenoti BPAY 0.00 24036 24036 S1 1229512 Blattabacterium cuenoti BPAA 0.01 624381 7372 G1 2647581 unclassified Blattabacterium 0.00 117777 0 S 39768 Blattabacterium sp. (Mastotermes darwiniensis) 0.00 117777 117777 S1 1074889 Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR 0.00 102506 0 S 624186 Blattabacterium sp. (Blattella germanica) 0.00 102506 102506 S1 331104 Blattabacterium sp. (Blattella germanica) str. Bge 0.00 88588 88588 S 2715232 Blattabacterium sp. DPU 0.00 87152 87152 S 298656 Blattabacterium sp. (Cryptocercus kyebangensis) 0.00 86390 86390 S 1186051 Blattabacterium sp. (Blaberus giganteus) 0.00 76740 76740 S 1316444 Blattabacterium sp. (Nauphoeta cinerea) 0.00 39151 0 S 367806 Blattabacterium sp. (Blatta orientalis) 0.00 39151 39151 S1 1072467 Blattabacterium sp. (Blatta orientalis) str. Tarazona 0.00 18705 0 S 367488 Blattabacterium sp. (Periplaneta americana) 0.00 18705 18705 S1 600809 Blattabacterium sp. (Periplaneta americana) str. BPLAN 0.00 166852 148446 S 164514 Blattabacterium punctulatus 0.00 18403 18403 S1 1075399 Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu 0.00 3 3 S1 1457032 Blattabacterium punctulatus CPU2 0.00 53818 53818 S 164516 Blattabacterium clevelandi 0.02 1423301 0 F 1853230 Crocinitomicaceae 0.02 1423301 0 G 332102 Fluviicola 0.02 1423301 0 S 191579 Fluviicola taffensis 0.02 1423301 1423301 S1 755732 Fluviicola taffensis DSM 16823 0.01 1265222 0 F 246874 Cryomorphaceae 0.01 1265222 0 G 267986 Owenweeksia 0.01 1265222 0 S 253245 Owenweeksia hongkongensis 0.01 1265222 1265222 S1 926562 Owenweeksia hongkongensis DSM 17368 0.01 511816 0 F 1755828 Ichthyobacteriaceae 0.01 511816 0 G 1755829 Ichthyobacterium 0.01 511816 511816 S 242600 Ichthyobacterium seriolicida 0.00 404618 143 O1 313602 Flavobacteriales incertae sedis 0.00 245536 0 G 336809 Candidatus Sulcia 0.00 245536 210224 S 336810 Candidatus Sulcia muelleri 0.00 35312 35312 S1 1189303 Candidatus Sulcia muelleri PSPU 0.00 86137 0 G 1940138 Candidatus Walczuchella 0.00 86137 86137 S 1415657 Candidatus Walczuchella monophlebidarum 0.00 72802 0 O2 670955 Candidatus Uzinura 0.00 72802 0 S 670956 Candidatus Uzinura diaspidicola 0.00 72802 72802 S1 1133592 Candidatus Uzinura diaspidicola str. ASNER 1.46 132109013 0 C 768503 Cytophagia 1.46 132109013 60306 O 768507 Cytophagales 0.56 50441303 103771 F 1853232 Hymenobacteraceae 0.34 31053369 558638 G 89966 Hymenobacter 0.24 21866005 1459405 G1 2615202 unclassified Hymenobacter 0.02 1635020 1635020 S 2596915 Hymenobacter sp. NBH84 0.02 1540972 1540972 S 1484116 Hymenobacter sp. PAMC 26554 0.02 1495458 1495458 S 2735321 Hymenobacter sp. TS19 0.02 1477166 1477166 S 2584940 Hymenobacter sp. DG01 0.02 1446376 1446376 S 2697562 Hymenobacter sp. BT182 0.02 1421763 1421763 S 1484118 Hymenobacter sp. PAMC 26628 0.02 1400556 1400556 S 2724192 Hymenobacter sp. BT18 0.02 1382558 1382558 S 2675878 Hymenobacter sp. BRD128 0.02 1379585 1379585 S 1356852 Hymenobacter sp. APR13 0.01 1342115 1342115 S 2761579 Hymenobacter sp. S2-20-2 0.01 1161039 1161039 S 1385664 Hymenobacter sp. DG25B 0.01 1059973 1059973 S 2675877 Hymenobacter sp. BRD67 0.01 983531 983531 S 1385663 Hymenobacter sp. DG25A 0.01 978552 978552 S 2615203 Hymenobacter sp. BRD72 0.01 877250 877250 S 2714932 Hymenobacter sp. HDW8 0.01 824686 824686 S 2496028 Hymenobacter sp. 17J36-26 0.02 1576662 1576662 S 2502781 Hymenobacter jejuensis 0.02 1538841 0 S 1446467 Hymenobacter swuensis 0.02 1538841 1538841 S1 1227739 Hymenobacter swuensis DY53 0.02 1468079 1468079 S 1385715 Hymenobacter qilianensis 0.02 1455619 1455619 S 1411621 Hymenobacter sedentarius 0.01 1314766 1314766 S 1850093 Hymenobacter nivis 0.01 1274759 1274759 S 2319843 Hymenobacter oligotrophus 0.10 9380728 55523 G 323449 Pontibacter 0.02 1696810 1696810 S 400092 Pontibacter korlensis 0.02 1675317 0 G1 2648980 unclassified Pontibacter 0.02 1675317 1675317 S 2571030 Pontibacter sp. SGAir0037 0.02 1549738 1549738 S 2694929 Pontibacter russatus 0.02 1540794 1540794 S 323450 Pontibacter actiniarum 0.02 1510524 1510524 S 388950 Pontibacter akesuensis 0.01 1352022 1352022 S 2694930 Pontibacter pudoricolor 0.05 4515631 10663 G 1379908 Rufibacter 0.03 2788975 4924 G1 2639626 unclassified Rufibacter 0.02 1518424 1518424 S 1379910 Rufibacter sp. DG31D 0.01 1265627 1265627 S 1379909 Rufibacter sp. DG15C 0.02 1715993 1715993 S 512763 Rufibacter tibetensis 0.04 4058134 28290 G 299566 Adhaeribacter 0.02 2131896 0 G1 2629780 unclassified Adhaeribacter 0.02 2131896 2131896 S 2745197 Adhaeribacter sp. KUDC8001 0.02 1897948 1897948 S 2086471 Adhaeribacter swui 0.01 1329670 0 G 1649474 Nibribacter 0.01 1329670 0 G1 2646046 unclassified Nibribacter 0.01 1329670 1329670 S 2698458 Nibribacter sp. BT10 0.54 48896309 36132 F 89373 Cytophagaceae 0.31 27659054 115366 G 107 Spirosoma 0.18 16452347 643370 G1 2621999 unclassified Spirosoma 0.03 2736623 2736623 S 2710596 Spirosoma sp. PL0136 0.03 2695647 2695647 S 2520506 Spirosoma sp. KCTC 42546 0.03 2667835 2667835 S 2666025 Spirosoma sp. I-24 0.02 2215283 2215283 S 2692134 Spirosoma sp. BT328 0.02 1896132 1896132 S 2728024 Spirosoma sp. CJU-R4 0.02 1806021 1806021 S 2745947 Spirosoma sp. KUDC1026 0.02 1791436 1791436 S 2735870 Spirosoma sp. TS118 0.03 2735892 2735892 S 2057025 Spirosoma pollinicola 0.03 2505712 2505712 S 1211326 Spirosoma aerolatum 0.02 2203573 2203573 S 1379870 Spirosoma radiotolerans 0.02 1831025 1831025 S 564064 Spirosoma rigui 0.02 1815139 1815139 S 1178516 Spirosoma montaniterrae 0.07 6708594 40152 G 105 Runella 0.05 4560095 3387 G1 2631759 unclassified Runella 0.03 2370287 2370287 S 2268026 Runella sp. SP2 0.02 2186421 2186421 S 2259595 Runella sp. HYN0085 0.02 2108347 0 S 106 Runella slithyformis 0.02 2108347 2108347 S1 761193 Runella slithyformis DSM 19594 0.05 4233228 5324 G 861914 Fibrella 0.02 2192855 0 S 651143 Fibrella aestuarina 0.02 2192855 2192855 S1 1166018 Fibrella aestuarina BUZ 2 0.02 2035049 0 G1 2620963 unclassified Fibrella 0.02 2035049 2035049 S 1834519 Fibrella sp. ES10-3-2-2 0.03 2762606 0 G 455076 Rhodocytophaga 0.03 2762606 0 G1 2704464 unclassified Rhodocytophaga 0.03 2762606 2762606 S 2704465 Rhodocytophaga sp. 172606-1 0.02 2209236 0 G 120831 Dyadobacter 0.02 2209236 0 S 94254 Dyadobacter fermentans 0.02 2209236 2209236 S1 471854 Dyadobacter fermentans DSM 18053 0.02 1679265 0 G 2173039 Arcticibacterium 0.02 1679265 1679265 S 1784714 Arcticibacterium luteifluviistationis 0.01 1343757 0 G 978 Cytophaga 0.01 1343757 0 S 985 Cytophaga hutchinsonii 0.01 1343757 1343757 S1 269798 Cytophaga hutchinsonii ATCC 33406 0.01 1239916 0 G 319458 Leadbetterella 0.01 1239916 0 S 316068 Leadbetterella byssophila 0.01 1239916 1239916 S1 649349 Leadbetterella byssophila DSM 17132 0.01 968538 0 G 2676060 Allopseudarcicella 0.01 968538 968538 S 998844 Allopseudarcicella aquatilis 0.00 55983 0 G 861913 Fibrisoma 0.00 55983 0 S 663275 Fibrisoma limi 0.00 55983 55983 S1 1185876 Fibrisoma limi BUZ 3 0.18 16399032 19347 F 563798 Cyclobacteriaceae 0.08 6931759 284815 G 390846 Echinicola 0.02 1761676 1761676 S 1795355 Echinicola strongylocentroti 0.02 1645839 1645839 S 1807691 Echinicola rosea 0.02 1625667 0 G1 2621165 unclassified Echinicola 0.02 1625667 1625667 S 2591634 Echinicola sp. LN3S3 0.02 1613762 0 S 390884 Echinicola vietnamensis 0.02 1613762 1613762 S1 926556 Echinicola vietnamensis DSM 17526 0.04 3709626 92545 G 68288 Cyclobacterium 0.02 1817726 0 S 104 Cyclobacterium marinum 0.02 1817726 1817726 S1 880070 Cyclobacterium marinum DSM 745 0.02 1799355 1799355 S 320787 Cyclobacterium amurskyense 0.03 2708447 1129 G 246875 Algoriphagus 0.02 1495563 1495563 S 388413 Algoriphagus machipongonensis 0.01 1211755 1211755 S 1727163 Algoriphagus sanaruensis 0.02 1806134 0 G 280472 Aquiflexum 0.02 1806134 0 S 280473 Aquiflexum balticum 0.02 1806134 1806134 S1 758820 Aquiflexum balticum DSM 16537 0.01 1223719 0 G 232244 Belliella 0.01 1223719 0 S 232259 Belliella baltica 0.01 1223719 1223719 S1 866536 Belliella baltica DSM 15883 0.07 6354231 18 F 200667 Flammeovirgaceae 0.05 4271268 5685 G 59739 Flammeovirga 0.02 2244419 0 G1 2637820 unclassified Flammeovirga 0.02 2244419 2244419 S 1191459 Flammeovirga sp. MY04 0.02 2021164 2021164 S 2494373 Flammeovirga pectinis 0.02 2082945 0 F1 340671 unclassified Flammeovirgaceae 0.02 2082945 2082945 S 1257021 Flammeovirgaceae bacterium 311 0.03 2611531 0 F 2762286 Fulvivirgaceae 0.03 2611531 0 G 1433993 Chryseolinea 0.03 2611531 2611531 S 2321403 Chryseolinea soli 0.02 1691614 0 O1 1751870 unclassified Cytophagales 0.02 1691614 1691614 S 1945892 Cytophagales bacterium TFI 002 0.02 1465510 124 F 1501348 Amoebophilaceae 0.01 928245 3321 G 273135 Candidatus Cardinium 0.00 325788 325788 S 247481 Candidatus Cardinium hertigii 0.00 320337 320337 S 650378 Cardinium endosymbiont of Sogatella furcifera 0.00 264782 0 S 249402 Cardinium endosymbiont of Encarsia pergandiella 0.00 264782 264782 S1 1231626 Cardinium endosymbiont cEper1 of Encarsia pergandiella 0.00 14017 0 S 672794 Cardinium endosymbiont of Bemisia tabaci 0.00 14017 14017 S1 1354314 Cardinium endosymbiont cBtQ1 of Bemisia tabaci 0.01 537141 0 G 281119 Candidatus Amoebophilus 0.01 537141 0 S 281120 Candidatus Amoebophilus asiaticus 0.01 537141 537141 S1 452471 Candidatus Amoebophilus asiaticus 5a2 0.02 1426158 0 F 2762306 Roseivirgaceae 0.02 1426158 0 G 290180 Roseivirga 0.02 1426158 1426158 S 1267423 Roseivirga pacifica 0.02 1402406 0 F 2762301 Marivirgaceae 0.02 1402406 0 G 869806 Marivirga 0.02 1402406 0 S 1006 Marivirga tractuosa 0.02 1402406 1402406 S1 643867 Marivirga tractuosa DSM 4126 0.01 1328595 0 F 1937968 Bernardetiaceae 0.01 1328595 0 G 1937972 Bernardetia 0.01 1328595 0 S 999 Bernardetia litoralis 0.01 1328595 1328595 S1 880071 Bernardetia litoralis DSM 6794 0.00 32018 0 F 1937962 Microscillaceae 0.00 32018 0 G 1023 Microscilla 0.00 32018 0 G1 2622911 unclassified Microscilla 0.00 32018 32018 S 155537 Microscilla sp. PRE1 1.10 99470836 6261 C 200643 Bacteroidia 0.99 89497360 1256714 O 171549 Bacteroidales 0.34 31102574 0 F 815 Bacteroidaceae 0.34 31102574 5066441 G 816 Bacteroides 0.07 6387572 572266 G1 2646097 unclassified Bacteroides 0.02 1883735 1883735 S 2715212 Bacteroides sp. CBA7301 0.01 1288937 1288937 S 2650157 Bacteroides sp. HF-5287 0.01 1074630 1074630 S 2650158 Bacteroides sp. HF-5141 0.01 981571 981571 S 2763022 Bacteroides sp. M10 0.00 306104 306104 S 2755405 Bacteroides sp. CACC 737 0.00 275687 275687 S 2528203 Bacteroides sp. A1C1 0.00 4642 4642 S 2162637 Bacteroides sp. PHL 2737 0.05 4150307 3932354 S 817 Bacteroides fragilis 0.00 117092 117092 S1 862962 Bacteroides fragilis 638R 0.00 100812 100812 S1 295405 Bacteroides fragilis YCH46 0.00 49 49 S1 272559 Bacteroides fragilis NCTC 9343 0.03 2786019 2784810 S 818 Bacteroides thetaiotaomicron 0.00 1209 1209 S1 226186 Bacteroides thetaiotaomicron VPI-5482 0.02 1945756 1945756 S 246787 Bacteroides cellulosilyticus 0.02 1862839 1860821 S 28116 Bacteroides ovatus 0.00 2018 2018 S1 1379690 Bacteroides ovatus V975 0.02 1567050 1567050 S 329854 Bacteroides intestinalis 0.01 1278304 1278304 S 47678 Bacteroides caccae 0.01 1205107 0 S 290053 Bacteroides helcogenes 0.01 1205107 1205107 S1 693979 Bacteroides helcogenes P 36-108 0.01 907087 0 S 151276 Bacteroides coprosuis 0.01 907087 907087 S1 679937 Bacteroides coprosuis DSM 18011 0.01 875850 875850 S 28113 Bacteroides heparinolyticus 0.01 852974 852974 S 1796613 Bacteroides caecimuris 0.01 810050 810050 S 28119 Bacteroides zoogleoformans 0.01 720409 720409 S 371601 Bacteroides xylanisolvens 0.01 686809 686809 S 820 Bacteroides uniformis 0.18 16085426 1480 F 171552 Prevotellaceae 0.15 13981748 566291 G 838 Prevotella 0.03 3053264 2897768 S 28131 Prevotella intermedia 0.00 155231 155231 S1 1122984 Prevotella intermedia ATCC 25611 = DSM 20706 0.00 265 265 S1 246198 Prevotella intermedia 17 0.02 1969022 1968993 S 28132 Prevotella melaninogenica 0.00 29 29 S1 553174 Prevotella melaninogenica ATCC 25845 0.01 1155640 849074 S 28129 Prevotella denticola 0.00 306566 306566 S1 767031 Prevotella denticola F0289 0.01 1142435 1878 S 839 Prevotella ruminicola 0.01 1140557 1140557 S1 264731 Prevotella ruminicola 23 0.01 997969 0 S 52227 Prevotella dentalis 0.01 997969 997969 S1 908937 Prevotella dentalis DSM 3688 0.01 977858 977858 S 1177574 Prevotella jejuni 0.01 932109 932109 S 28135 Prevotella oris 0.01 879604 0 S 589436 Prevotella fusca 0.01 879604 879604 S1 1236517 Prevotella fusca JCM 17724 0.01 821754 821754 S 76123 Prevotella enoeca 0.01 754049 0 S 589437 Prevotella scopos 0.01 754049 754049 S1 1236518 Prevotella scopos JCM 17725 0.01 731753 0 G1 2638335 unclassified Prevotella 0.01 731753 0 S 652716 Prevotella sp. oral taxon 299 0.01 731753 731753 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.01 1204083 0 G 577309 Paraprevotella 0.01 1204083 0 S 454155 Paraprevotella xylaniphila 0.01 1204083 1204083 S1 762982 Paraprevotella xylaniphila YIT 11841 0.01 898115 0 G 1283313 Alloprevotella 0.01 898115 0 G1 2624623 unclassified Alloprevotella 0.01 898115 898115 S 2133944 Alloprevotella sp. E39 0.10 9195960 261 F 171550 Rikenellaceae 0.09 8306683 275796 G 239759 Alistipes 0.01 1293657 0 S 328813 Alistipes onderdonkii 0.01 1293657 1293657 S1 2585117 Alistipes onderdonkii subsp. vulgaris 0.01 1218713 1218713 S 2585118 Alistipes communis 0.01 966519 0 S 214856 Alistipes finegoldii 0.01 966519 966519 S1 679935 Alistipes finegoldii DSM 17242 0.01 946561 946561 S 626932 Alistipes indistinctus 0.01 938213 0 S 328814 Alistipes shahii 0.01 938213 938213 S1 717959 Alistipes shahii WAL 8301 0.01 935445 935445 S 2364787 Alistipes megaguti 0.01 911749 0 G1 2608932 unclassified Alistipes 0.01 911749 911749 S 2662363 Alistipes sp. dk3624 0.01 820030 820030 S 2585119 Alistipes dispar 0.01 889016 0 G 1611681 Mucinivorans 0.01 889016 889016 S 1433126 Mucinivorans hirudinis 0.06 5757950 359 F 2005525 Tannerellaceae 0.04 3536429 1444879 G 375288 Parabacteroides 0.02 1985576 1703592 S 823 Parabacteroides distasonis 0.00 281984 281984 S1 435591 Parabacteroides distasonis ATCC 8503 0.00 105974 0 G1 2649774 unclassified Parabacteroides 0.00 105974 105974 S 2025876 Parabacteroides sp. CT06 0.02 2221162 696 G 195950 Tannerella 0.01 1319395 939147 S 28112 Tannerella forsythia 0.00 133949 133949 S1 1307832 Tannerella forsythia 3313 0.00 131431 131431 S1 203275 Tannerella forsythia 92A2 0.00 114868 114868 S1 1307833 Tannerella forsythia KS16 0.01 901071 0 G1 2620507 unclassified Tannerella 0.01 901071 901071 S 712710 Tannerella sp. oral taxon HOT-286 0.06 5436136 25 O1 333046 Bacteroidales incertae sedis 0.05 4832568 711718 G 909656 Phocaeicola 0.02 1686771 1512191 S 357276 Phocaeicola dorei 0.00 174580 174580 S1 997877 Bacteroides dorei CL03T12C01 0.01 1277261 0 S 376805 Phocaeicola salanitronis 0.01 1277261 1277261 S1 667015 Phocaeicola salanitronis DSM 18170 0.01 1156818 845937 S 821 Phocaeicola vulgatus 0.00 310881 310881 S1 435590 Bacteroides vulgatus ATCC 8482 0.01 603543 0 G 511434 Candidatus Azobacteroides 0.01 603543 255118 S 511435 Candidatus Azobacteroides pseudotrichonymphae 0.00 348425 348425 S1 511995 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 0.06 5239742 27078 F 2005520 Dysgonomonadaceae 0.02 1952395 0 G 156973 Dysgonomonas 0.02 1952395 735749 G1 2630389 unclassified Dysgonomonas 0.01 624542 624542 S 2714927 Dysgonomonas sp. HDW5B 0.01 592104 592104 S 2714926 Dysgonomonas sp. HDW5A 0.01 1344071 0 G 294702 Proteiniphilum 0.01 1344071 1344071 S 1642647 Proteiniphilum saccharofermentans 0.01 1067621 0 G 307628 Petrimonas 0.01 1067621 1067621 S 1642646 Petrimonas mucosa 0.01 848577 0 G 1784836 Fermentimonas 0.01 848577 848577 S 1562970 Fermentimonas caenicola 0.06 5084240 40198 F 2005473 Muribaculaceae 0.02 2060225 18266 G 2518495 Duncaniella 0.01 1051508 1051508 S 2518971 Duncaniella dubosii 0.01 990451 969097 G1 2649562 unclassified Duncaniella 0.00 17453 17453 S 2530392 Duncaniella sp. C9 0.00 3901 3901 S 2576606 Duncaniella sp. B8 0.02 1967818 13037 G 1918540 Muribaculum 0.01 1000352 0 G1 2622126 unclassified Muribaculum 0.01 1000352 1000352 S 2530390 Muribaculum sp. TLL-A4 0.01 954429 954429 S 1796646 Muribaculum intestinale 0.01 1015999 0 F1 2006847 unclassified Muribaculaceae 0.01 1015999 1015999 S 2652307 Muribaculaceae bacterium DSM 108610 0.04 3803530 0 F 171551 Porphyromonadaceae 0.04 3803530 9200 G 836 Porphyromonas 0.02 1723814 1640019 S 837 Porphyromonas gingivalis 0.00 49891 49891 S1 1403338 Porphyromonas gingivalis A7A1-28 0.00 33052 33052 S1 1403336 Porphyromonas gingivalis AJW4 0.00 352 352 S1 1030843 Porphyromonas gingivalis TDC60 0.00 241 241 S1 1403335 Porphyromonas gingivalis 381 0.00 220 220 S1 431947 Porphyromonas gingivalis ATCC 33277 0.00 39 39 S1 242619 Porphyromonas gingivalis W83 0.01 742179 742179 S 36874 Porphyromonas cangingivalis 0.01 677460 0 S 28123 Porphyromonas asaccharolytica 0.01 677460 677460 S1 879243 Porphyromonas asaccharolytica DSM 20707 0.01 650877 650877 S 393921 Porphyromonas crevioricanis 0.03 2659895 4742 F 1853231 Odoribacteraceae 0.02 1365958 0 G 574697 Butyricimonas 0.02 1365958 1365958 S 2093856 Butyricimonas faecalis 0.01 1289195 0 G 283168 Odoribacter 0.01 1289195 1288414 S 28118 Odoribacter splanchnicus 0.00 781 781 S1 709991 Odoribacter splanchnicus DSM 20712 0.01 1140893 0 F 2005523 Paludibacteraceae 0.01 1140893 0 G 346096 Paludibacter 0.01 1140893 0 S 185300 Paludibacter propionicigenes 0.01 1140893 1140893 S1 694427 Paludibacter propionicigenes WB4 0.01 996676 0 F 2760872 Tenuifilaceae 0.01 996676 0 G 2760873 Tenuifilum 0.01 996676 996676 S 2590900 Tenuifilum thalassicum 0.01 911961 0 F 2005519 Barnesiellaceae 0.01 911961 0 G 397864 Barnesiella 0.01 911961 0 S 397865 Barnesiella viscericola 0.01 911961 911961 S1 880074 Barnesiella viscericola DSM 18177 0.01 825663 0 O1 185291 unclassified Bacteroidales 0.01 825663 825663 S 1400053 Bacteroidales bacterium CF 0.11 9967215 868 O 1970189 Marinilabiliales 0.06 5379799 3561 F 1471398 Prolixibacteraceae 0.03 3052517 39208 G 1471399 Draconibacterium 0.02 1536923 1536923 S 1168034 Draconibacterium orientale 0.02 1476386 0 G1 2624132 unclassified Draconibacterium 0.02 1476386 1476386 S 2706887 Draconibacterium sp. M1 0.03 2323721 0 F1 1952944 unclassified Prolixibacteraceae 0.03 2323721 2323721 S 2681766 Prolixibacteraceae bacterium WC007 0.02 1751177 0 F 1573805 Marinifilaceae 0.02 1751177 0 G 2060722 Labilibaculum 0.02 1751177 1751177 S 1717717 Labilibaculum antarcticum 0.02 1442057 0 F 558415 Marinilabiliaceae 0.02 1442057 0 G 1193324 Alkalitalea 0.02 1442057 1442057 S 889453 Alkalitalea saponilacus 0.02 1393314 0 F 1970190 Salinivirgaceae 0.02 1393314 0 G 1970191 Salinivirga 0.02 1393314 1393314 S 1307839 Salinivirga cyanobacteriivorans 0.84 75890860 0 C 117747 Sphingobacteriia 0.84 75890860 0 O 200666 Sphingobacteriales 0.84 75890860 1541865 F 84566 Sphingobacteriaceae 0.28 25523468 2441569 G 423349 Mucilaginibacter 0.10 8743679 10944 G1 2617802 unclassified Mucilaginibacter 0.02 2153076 2153076 S 2305508 Mucilaginibacter sp. HYN0043 0.02 1868923 1868923 S 2740462 Mucilaginibacter sp. G2-14 0.02 1745870 1745870 S 1300914 Mucilaginibacter sp. PAMC 26640 0.02 1556977 1556977 S 2728022 Mucilaginibacter sp. F39-2 0.02 1407889 1407889 S 2703789 Mucilaginibacter sp. 14171R-50 0.03 2533054 0 S 423351 Mucilaginibacter paludis 0.03 2533054 2533054 S1 714943 Mucilaginibacter paludis DSM 18603 0.03 2388320 2388320 S 862126 Mucilaginibacter ginsenosidivorax 0.03 2299939 2299939 S 2027860 Mucilaginibacter rubeus 0.02 1944822 1944822 S 1550579 Mucilaginibacter gotjawali 0.02 1858738 1858738 S 652787 Mucilaginibacter mallensis 0.02 1675221 1675221 S 398053 Mucilaginibacter ginsenosidivorans 0.02 1633068 1633068 S 1234841 Mucilaginibacter xinganensis 0.00 5058 5058 S 551996 Mucilaginibacter gossypii 0.23 20922250 219916 G 84567 Pedobacter 0.11 10193001 18176 G1 2628915 unclassified Pedobacter 0.02 1923143 1923143 S 2714940 Pedobacter sp. HDW13 0.02 1908153 1908153 S 2201271 Pedobacter sp. eg 0.02 1887052 1887052 S 1727164 Pedobacter sp. PACM 27299 0.02 1764401 1764401 S 2578106 Pedobacter sp. KBS0701 0.02 1531200 1531200 S 2482728 Pedobacter sp. G11 0.01 1159048 1159048 S 2605747 Pedobacter sp. CJ43 0.00 1828 1828 S 524386 Pedobacter sp. BG5 0.02 2024349 2024349 S 430522 Pedobacter steynii 0.02 1829568 1829568 S 188932 Pedobacter cryoconitis 0.02 1773686 1773686 S 336820 Pedobacter roseus 0.02 1649945 1649945 S 363852 Pedobacter ginsengisoli 0.02 1642914 1642914 S 332999 Pedobacter suwonensis 0.02 1588871 0 S 984 Pedobacter heparinus 0.02 1588871 1588871 S1 485917 Pedobacter heparinus DSM 2366 0.21 19232132 1097201 G 28453 Sphingobacterium 0.10 8619318 510655 G1 2609468 unclassified Sphingobacterium 0.02 2171751 2171751 S 2713573 Sphingobacterium sp. DR205 0.02 1600302 1600302 S 1538644 Sphingobacterium sp. ML3W 0.01 1298763 1298763 S 2662364 Sphingobacterium sp. dk4302 0.01 1158836 1158836 S 2557994 Sphingobacterium sp. CZ-2 0.01 660221 660221 S 1933220 Sphingobacterium sp. B29 0.01 651700 651700 S 2003121 Sphingobacterium sp. G1-14 0.01 567090 567090 S 743722 Sphingobacterium sp. 21 0.02 1770370 1770370 S 259 Sphingobacterium thalpophilum 0.02 1419476 1419476 S 1010 Sphingobacterium mizutaii 0.02 1392446 1392446 S 371142 Sphingobacterium daejeonense 0.02 1354774 1354774 S 561061 Sphingobacterium psychroaquaticum 0.01 1328540 1328540 S 649196 Sphingobacterium hotanense 0.01 1229019 1229019 S 797291 Sphingobacterium lactis 0.01 1020988 1020988 S 28454 Sphingobacterium multivorum 0.03 2523782 0 G 376469 Olivibacter 0.03 2523782 848 G1 2632301 unclassified Olivibacter 0.02 1866674 1866674 S 2764720 Olivibacter sp. SDN3 0.01 656260 656260 S 2592345 Olivibacter sp. LS-1 0.02 1788458 0 F1 84568 unclassified Sphingobacteriaceae 0.02 1788458 1788458 S 1986952 Sphingobacteriaceae bacterium GW460-11-11-14-LB5 0.02 1614393 0 G 929509 Solitalea 0.02 1614393 0 S 995 Solitalea canadensis 0.02 1614393 1614393 S1 929556 Solitalea canadensis DSM 3403 0.02 1395620 0 G 1649482 Pseudopedobacter 0.02 1395620 0 S 151895 Pseudopedobacter saltans 0.02 1395620 1395620 S1 762903 Pseudopedobacter saltans DSM 12145 0.01 1348892 0 G 1773450 Anseongella 0.01 1348892 1348892 S 496056 Anseongella ginsenosidimutans 0.50 45437755 0 C 1853228 Chitinophagia 0.50 45437755 0 O 1853229 Chitinophagales 0.50 45437755 35746 F 563835 Chitinophagaceae 0.18 16557293 73721 G 79328 Chitinophaga 0.11 9774942 2362754 G1 2619133 unclassified Chitinophaga 0.03 2451989 2451989 S 2703787 Chitinophaga sp. H33E-04 0.03 2418075 2418075 S 2033437 Chitinophaga sp. MD30 0.02 1961333 1961333 S 2604421 Chitinophaga sp. XS-30 0.00 309470 309470 S 2725416 Chitinophaga sp. 1310 0.00 271321 271321 S 2725414 Chitinophaga sp. 1303 0.06 5058913 2228362 S 79329 Chitinophaga pinensis 0.03 2830551 2830551 S1 485918 Chitinophaga pinensis DSM 2588 0.02 1649717 1649717 S 2029983 Chitinophaga caeni 0.06 5476373 1326 G 1769012 Arachidicoccus 0.04 3683546 943 G1 2636138 unclassified Arachidicoccus 0.02 1406354 1406354 S 2545455 Arachidicoccus sp. B3-10 0.01 1228687 1228687 S 2341117 Arachidicoccus sp. KIS59-12 0.01 1047562 1047562 S 1850526 Arachidicoccus sp. BS20 0.02 1791501 1791501 S 496057 Arachidicoccus ginsenosidivorans 0.05 4953995 1827 G 398041 Flavisolibacter 0.02 1865519 1865519 S 1492898 Flavisolibacter tropicus 0.02 1577397 1577397 S 661481 Flavisolibacter ginsenosidimutans 0.02 1509252 0 G1 2639558 unclassified Flavisolibacter 0.02 1509252 1509252 S 2502779 Flavisolibacter sp. 17J28-1 0.04 3198437 4712 G 379899 Niabella 0.02 1740400 1740400 S 1176587 Niabella ginsenosidivorans 0.02 1453325 0 S 446683 Niabella soli 0.02 1453325 1453325 S1 929713 Niabella soli DSM 19437 0.03 2869663 0 G 354354 Niastella 0.03 2869663 0 S 354356 Niastella koreensis 0.03 2869663 2869663 S1 700598 Niastella koreensis GR20-10 0.03 2703297 0 G 2698688 Paraflavitalea 0.03 2703297 2703297 S 2315862 Paraflavitalea soli 0.03 2482339 0 G 649460 Filimonas 0.03 2482339 2482339 S 477680 Filimonas lacunae 0.03 2470364 0 G 1860196 Pseudobacter 0.03 2470364 2470364 S 661488 Pseudobacter ginsenosidimutans 0.02 1693561 0 G 1874621 Panacibacter 0.02 1693561 1693561 S 1813871 Panacibacter ginsenosidivorans 0.02 1610131 0 G 649461 Lacibacter 0.02 1610131 0 G1 2630913 unclassified Lacibacter 0.02 1610131 1610131 S 2760713 Lacibacter sp. S13-6-6 0.02 1386556 0 G 1004301 Flavihumibacter 0.02 1386556 0 G1 2621068 unclassified Flavihumibacter 0.02 1386556 1386556 S 2676868 Flavihumibacter sp. SB-02 0.08 7315736 0 O 1100069 Bacteroidetes Order II. Incertae sedis 0.08 7315736 5771 F 563843 Rhodothermaceae 0.03 2949052 0 G 146918 Salinibacter 0.03 2949052 2766156 S 146919 Salinibacter ruber 0.00 113567 113567 S1 761659 Salinibacter ruber M8 0.00 69329 69329 S1 309807 Salinibacter ruber DSM 13855 0.02 2239977 0 G 29548 Rhodothermus 0.02 2239977 1370847 S 29549 Rhodothermus marinus 0.00 435262 435262 S1 762570 Rhodothermus marinus SG0.5JP17-172 0.00 433868 433868 S1 518766 Rhodothermus marinus DSM 4252 0.02 2120936 767019 F1 1196022 unclassified Rhodothermaceae 0.01 692909 692909 S 2026787 Rhodothermaceae bacterium 0.01 661008 661008 S 1779382 Rhodothermaceae bacterium RA 0.04 4004054 0 C 1937959 Saprospiria 0.04 4004054 35 O 1936988 Saprospirales 0.03 2715098 0 F 1937961 Haliscomenobacteraceae 0.03 2715098 0 G 2349 Haliscomenobacter 0.03 2715098 0 S 2350 Haliscomenobacter hydrossis 0.03 2715098 2715098 S1 760192 Haliscomenobacter hydrossis DSM 1100 0.01 1288921 0 F 89374 Saprospiraceae 0.01 1288921 0 G 1007 Saprospira 0.01 1288921 0 S 1008 Saprospira grandis 0.01 1288921 1288921 S1 984262 Saprospira grandis str. Lewin 0.13 11868308 0 P 1090 Chlorobi 0.13 11868308 0 C 191410 Chlorobia 0.13 11868308 0 O 191411 Chlorobiales 0.13 11868308 32811 F 191412 Chlorobiaceae 0.06 5689550 54133 F1 274493 Chlorobium/Pelodictyon group 0.04 4044902 13570 G 1091 Chlorobium 0.02 1687988 718 S 1096 Chlorobium phaeobacteroides 0.01 889792 889792 S1 290317 Chlorobium phaeobacteroides DSM 266 0.01 797478 797478 S1 331678 Chlorobium phaeobacteroides BS1 0.01 819858 4396 S 1092 Chlorobium limicola 0.01 815462 815462 S1 290315 Chlorobium limicola DSM 245 0.01 788488 0 S 337090 Chlorobium chlorochromatii 0.01 788488 788488 S1 340177 Chlorobium chlorochromatii CaD3 0.01 734998 588507 S 1094 Chlorobium phaeovibrioides 0.00 146491 146491 S1 290318 Chlorobium phaeovibrioides DSM 265 0.02 1590515 506 G 1099 Pelodictyon 0.01 901183 0 S 34090 Pelodictyon phaeoclathratiforme 0.01 901183 901183 S1 324925 Pelodictyon phaeoclathratiforme BU-1 0.01 688826 0 S 1100 Pelodictyon luteolum 0.01 688826 688826 S1 319225 Pelodictyon luteolum DSM 273 0.03 2992623 6892 G 1101 Prosthecochloris 0.02 2208571 7012 G1 2632826 unclassified Prosthecochloris 0.01 759168 759168 S 281093 Prosthecochloris sp. GSB1 0.01 721408 721408 S 1868325 Prosthecochloris sp. CIB 2401 0.01 720983 720983 S 1974213 Prosthecochloris sp. HL-130-GSB 0.01 777160 0 S 1102 Prosthecochloris aestuarii 0.01 777160 777160 S1 290512 Prosthecochloris aestuarii DSM 271 0.02 2143975 60702 G 256319 Chlorobaculum 0.01 799608 799608 S 274537 Chlorobaculum limnaeum 0.01 673734 0 S 274539 Chlorobaculum parvum 0.01 673734 673734 S1 517417 Chlorobaculum parvum NCIB 8327 0.01 609931 0 S 1097 Chlorobaculum tepidum 0.01 609931 609931 S1 194439 Chlorobaculum tepidum TLS 0.01 1009349 0 G 100715 Chloroherpeton 0.01 1009349 0 S 100716 Chloroherpeton thalassium 0.01 1009349 1009349 S1 517418 Chloroherpeton thalassium ATCC 35110 0.02 2108171 0 P 1134404 Ignavibacteriae 0.02 2108171 0 C 795747 Ignavibacteria 0.02 2108171 595 O 795748 Ignavibacteriales 0.01 1102774 0 F 795749 Ignavibacteriaceae 0.01 1102774 0 G 795750 Ignavibacterium 0.01 1102774 0 S 591197 Ignavibacterium album 0.01 1102774 1102774 S1 945713 Ignavibacterium album JCM 16511 0.01 1004802 0 F 1334117 Melioribacteraceae 0.01 1004802 0 G 1134403 Melioribacter 0.01 1004802 0 S 1134405 Melioribacter roseus 0.01 1004802 1004802 S1 1191523 Melioribacter roseus P3M-2 0.01 1324234 0 P 1936987 Balneolaeota 0.01 1324234 0 P1 2489366 unclassified Balneolaeota 0.01 1324234 0 G 2489367 Candidatus Cyclonatronum 0.01 1324234 1324234 S 1457365 Candidatus Cyclonatronum proteinivorum 0.07 6579195 0 P 142182 Gemmatimonadetes 0.07 6579195 0 C 219685 Gemmatimonadetes 0.07 6579195 0 O 219686 Gemmatimonadales 0.07 6579195 2435 F 219687 Gemmatimonadaceae 0.05 4588714 14186 G 173479 Gemmatimonas 0.02 1616660 0 G1 2646123 unclassified Gemmatimonas 0.02 1616660 1616660 S 2732249 Gemmatimonas sp. TET16 0.02 1493233 1493233 S 1379270 Gemmatimonas phototrophica 0.02 1464635 0 S 173480 Gemmatimonas aurantiaca 0.02 1464635 1464635 S1 379066 Gemmatimonas aurantiaca T-27 0.02 1988046 0 G 1706036 Gemmatirosa 0.02 1988046 1988046 S 861299 Gemmatirosa kalamazoonesis 0.01 1209035 0 P 65842 Fibrobacteres 0.01 1209035 0 C 204430 Fibrobacteria 0.01 1209035 0 O 218872 Fibrobacterales 0.01 1209035 0 F 204431 Fibrobacteraceae 0.01 1209035 0 G 832 Fibrobacter 0.01 1209035 0 S 833 Fibrobacter succinogenes 0.01 1209035 0 S1 834 Fibrobacter succinogenes subsp. succinogenes 0.01 1209035 1209035 S2 59374 Fibrobacter succinogenes subsp. succinogenes S85 0.01 1113185 0 P 1379697 candidate division Zixibacteria 0.01 1113185 0 P1 2751484 unclassified candidate division Zixibacteria 0.01 1113185 1113185 S 2053527 candidate division Zixibacteria bacterium 0.01 688232 0 P 456828 Candidatus Cloacimonetes 0.01 688232 0 G 456826 Candidatus Cloacimonas 0.01 688232 0 S 456827 Candidatus Cloacimonas acidaminovorans 0.01 688232 688232 S1 459349 Candidatus Cloacimonas acidaminovorans str. Evry 2.42 218369469 15712 D1 1783257 PVC group 1.96 177092873 3513350 P 203682 Planctomycetes 1.09 98413628 11484899 P1 473814 unclassified Planctomycetes 0.03 3089081 3089081 S 2527979 Planctomycetes bacterium Enr13 0.03 3043172 3043172 S 2026780 Planctomycetes bacterium 0.03 3024609 3024609 S 2527963 Planctomycetes bacterium TBK1r 0.03 2958650 2958650 S 2528010 Planctomycetes bacterium Pla85_3_4 0.03 2870022 2870022 S 2596890 Planctomycetes bacterium SRT547 0.03 2823404 2823404 S 2528021 Planctomycetes bacterium ETA_A8 0.03 2669477 2669477 S 2527974 Planctomycetes bacterium ElP 0.03 2649843 2649843 S 2527968 Planctomycetes bacterium Q31a 0.03 2641336 2641336 S 1930273 Planctomycetes bacterium K22_7 0.03 2532436 2532436 S 1930275 Planctomycetes bacterium K23_9 0.03 2417623 2417623 S 2528026 Planctomycetes bacterium Mal4 0.03 2394005 2394005 S 2528018 Planctomycetes bacterium Poly30 0.03 2351049 2351049 S 2527975 Planctomycetes bacterium Pan216 0.03 2265237 2265237 S 1930274 Planctomycetes bacterium FF011L 0.02 2253676 2253676 S 2528023 Planctomycetes bacterium ETA_A1 0.02 2242396 2242396 S 2528025 Planctomycetes bacterium SV_7m_r 0.02 2175443 2175443 S 2527971 Planctomycetes bacterium Pan161 0.02 2165862 2165862 S 2527973 Planctomycetes bacterium Pan241w 0.02 2131021 2131021 S 2527983 Planctomycetes bacterium Pan44 0.02 2124329 2124329 S 2527976 Planctomycetes bacterium Enr17 0.02 2043020 2043020 S 2527972 Planctomycetes bacterium Pan181 0.02 2019985 2019985 S 2527994 Planctomycetes bacterium Mal48 0.02 2008286 2008286 S 2528009 Planctomycetes bacterium Pla175 0.02 1961137 1961137 S 2528007 Planctomycetes bacterium Pla110 0.02 1896783 1896783 S 1930276 Planctomycetes bacterium HG15A2 0.02 1820401 1820401 S 2528017 Planctomycetes bacterium Poly24 0.02 1654742 1654742 S 2527980 Planctomycetes bacterium Pan189 0.02 1645856 1645856 S 2528027 Planctomycetes bacterium V22 0.02 1583722 1583722 S 1930277 Planctomycetes bacterium EC9 0.02 1511791 1511791 S 2527964 Planctomycetes bacterium V144 0.02 1500902 1500902 S 2528008 Planctomycetes bacterium Pla163 0.02 1464820 1464820 S 2527965 Planctomycetes bacterium V202 0.02 1453506 1453506 S 2527998 Planctomycetes bacterium MalM25 0.02 1364014 1364014 S 2528020 Planctomycetes bacterium KS4 0.01 1293512 1293512 S 2528030 Planctomycetes bacterium V6 0.01 1235929 1235929 S 2528029 Planctomycetes bacterium Pan153 0.01 1210257 1210257 S 2527995 Planctomycetes bacterium Mal52 0.01 1168299 1168299 S 2527981 Planctomycetes bacterium Pan258 0.01 1096435 1096435 S 2527982 Planctomycetes bacterium Pan265 0.01 846515 846515 S 2527967 Planctomycetes bacterium HG66A1 0.01 846284 846284 S 2527992 Planctomycetes bacterium Mal33 0.01 822631 822631 S 2527990 Planctomycetes bacterium CA51 0.01 742632 742632 S 2528028 Planctomycetes bacterium Pan110 0.01 724093 724093 S 2527997 Planctomycetes bacterium MalM14 0.01 649990 649990 S 2527978 Planctomycetes bacterium Enr10 0.01 609350 609350 S 2527993 Planctomycetes bacterium Mal35 0.01 451233 451233 S 2527988 Planctomycetes bacterium CA11 0.00 244895 244895 S 2528022 Planctomycetes bacterium Spa11 0.00 233890 233890 S 2527962 Planctomycetes bacterium K2D 0.00 695 695 S 2528012 Planctomycetes bacterium Pla86 0.00 453 453 S 2528011 Planctomycetes bacterium Pla133 0.74 66977916 48995 C 203683 Planctomycetia 0.24 21996312 276 O 112 Planctomycetales 0.22 19910777 2744 F 126 Planctomycetaceae 0.05 4605588 0 G 118 Planctomyces 0.05 4605588 274 G1 2648843 unclassified Planctomyces 0.03 2589245 2589245 S 1632864 Planctomyces sp. SH-PL14 0.02 2016069 2016069 S 1636152 Planctomyces sp. SH-PL62 0.03 3003282 429494 G 1649480 Planctopirus 0.01 1327562 0 S 120 Planctopirus limnophila 0.01 1327562 1327562 S1 521674 Planctopirus limnophila DSM 3776 0.01 1246226 1246226 S 2528019 Planctopirus ephydatiae 0.03 2773053 0 G 1936111 Fuerstia 0.03 2773053 2773053 S 1891926 Fuerstia marisgermanicae 0.03 2262271 0 G 2714592 Crateriforma 0.03 2262271 2262271 S 2527996 Crateriforma conspicua 0.02 2055036 0 G 2714594 Bremerella 0.02 2055036 2055036 S 2527984 Bremerella volcania 0.02 1900381 0 G 1649490 Rubinisphaera 0.02 1900381 0 S 119 Rubinisphaera brasiliensis 0.02 1900381 1900381 S1 756272 Rubinisphaera brasiliensis DSM 5305 0.02 1693986 328 G 1649453 Gimesia 0.01 1226748 0 G1 2634125 unclassified Gimesia 0.01 1226748 1226748 S 2608982 Gimesia sp. E7 0.01 466910 466910 S 122 Gimesia maris 0.02 1614436 0 G 2714737 Alienimonas 0.02 1614436 1614436 S 2527989 Alienimonas californiensis 0.02 2085259 0 O1 466154 unclassified Planctomycetales 0.02 2085259 2085259 S 2603660 Planctomycetales bacterium 10988 0.21 18798248 1105 O 2691354 Pirellulales 0.12 10901605 1162 F 2691357 Pirellulaceae 0.04 4000072 142 G 123 Pirellula 0.02 2026775 0 G1 2639138 unclassified Pirellula 0.02 2026775 2026775 S 1632865 Pirellula sp. SH-Sr6A 0.02 1973155 0 S 125 Pirellula staleyi 0.02 1973155 1973155 S1 530564 Pirellula staleyi DSM 6068 0.03 2555684 0 G 1579506 Roseimaritima 0.03 2555684 2555684 S 980254 Roseimaritima ulvae 0.03 2263352 0 G 265488 Rhodopirellula 0.03 2263352 0 S 265606 Rhodopirellula baltica 0.03 2263352 2263352 S1 243090 Rhodopirellula baltica SH 1 0.02 2081335 0 G 2005380 Mariniblastus 0.02 2081335 2081335 S 980251 Mariniblastus fucicola 0.07 6348572 23564 F 2691359 Lacipirellulaceae 0.02 2150643 0 G 2691417 Lacipirellula 0.02 2150643 2150643 S 2650471 Lacipirellula parvula 0.02 2108418 0 F1 2691521 unclassified Lacipirellulaceae 0.02 2108418 2108418 S 2528024 Planctomycetes bacterium I41 0.02 2065947 0 G 1400386 Bythopirellula 0.02 2065947 2065947 S 1400387 Bythopirellula goksoyri 0.02 1546966 0 F 2691358 Thermoguttaceae 0.02 1546966 0 G 1676125 Thermogutta 0.02 1546966 1546966 S 1331910 Thermogutta terrifontis 0.18 15934058 0 O 2691355 Gemmatales 0.18 15934058 53718 F 1914233 Gemmataceae 0.09 7981128 611903 G 113 Gemmata 0.03 2628758 2627486 S 114 Gemmata obscuriglobus 0.00 1272 1272 S1 214688 Gemmata obscuriglobus UQM 2246 0.03 2546748 2546748 S 1210884 Gemmata massiliana 0.02 2193719 0 G1 2622970 unclassified Gemmata 0.02 2193719 2193719 S 1630693 Gemmata sp. SH-PL17 0.03 2909629 0 F1 2052163 unclassified Gemmataceae 0.03 2909629 2909629 S 2052164 Gemmataceae bacterium 0.03 2866628 0 G 2731450 Limnoglobus 0.03 2866628 2866628 S 2598579 Limnoglobus roseus 0.02 2122955 0 G 2051044 Tuwongella 0.02 2122955 2122955 S 692036 Tuwongella immobilis 0.11 10200303 0 O 2691356 Isosphaerales 0.11 10200303 13188 F 1763524 Isosphaeraceae 0.03 3130289 0 G 1511635 Aquisphaera 0.03 3130289 3130289 S 406548 Aquisphaera giovannonii 0.03 2979646 0 G 466152 Singulisphaera 0.03 2979646 0 S 466153 Singulisphaera acidiphila 0.03 2979646 2979646 S1 886293 Singulisphaera acidiphila DSM 18658 0.03 2325744 0 G 1763521 Paludisphaera 0.03 2325744 2325744 S 1387353 Paludisphaera borealis 0.02 1751436 0 G 127 Isosphaera 0.02 1751436 0 S 128 Isosphaera pallida 0.02 1751436 1751436 S1 575540 Isosphaera pallida ATCC 43644 0.08 6785206 115 C 666505 Phycisphaerae 0.05 4329267 331 O 2483366 Sedimentisphaerales 0.03 3002454 390 F 2483367 Sedimentisphaeraceae 0.02 1822410 37879 G 2483368 Sedimentisphaera 0.01 934900 934900 S 1941349 Sedimentisphaera salicampi 0.01 849631 849631 S 1940790 Sedimentisphaera cyanobacteriorum 0.01 1179654 0 G 2690160 Limihaloglobus 0.01 1179654 1179654 S 1851148 Limihaloglobus sulfuriphilus 0.01 1326482 0 F 2690158 Anaerohalosphaeraceae 0.01 1326482 0 G 2690159 Anaerohalosphaera 0.01 1326482 1326482 S 1936003 Anaerohalosphaera lusitana 0.02 1359782 0 C1 1546154 unclassified Phycisphaerae 0.02 1359782 1359782 S 2528035 Phycisphaerae bacterium RAS2 0.01 1096042 0 O 666506 Phycisphaerales 0.01 1096042 0 F 666507 Phycisphaeraceae 0.01 1096042 0 G 666508 Phycisphaera 0.01 1096042 0 S 547188 Phycisphaera mikurensis 0.01 1096042 1096042 S1 1142394 Phycisphaera mikurensis NBRC 102666 0.02 1402773 0 C 2517206 Candidatus Brocadiae 0.02 1402773 0 O 1127829 Candidatus Brocadiales 0.02 1402773 0 F 1127830 Candidatus Brocadiaceae 0.02 1402773 0 G 380738 Candidatus Kuenenia 0.02 1402773 1402773 S 174633 Candidatus Kuenenia stuttgartiensis 0.30 26984097 10832 P 74201 Verrucomicrobia 0.13 11601611 0 C 203494 Verrucomicrobiae 0.13 11601611 623 O 48461 Verrucomicrobiales 0.09 8318549 5082 F 203557 Verrucomicrobiaceae 0.04 3723796 65 G 2735 Verrucomicrobium 0.03 2575879 0 S 2736 Verrucomicrobium spinosum 0.03 2575879 2575879 S1 240016 Verrucomicrobium spinosum DSM 4136 = JCM 18804 0.01 1147852 0 G1 2625155 unclassified Verrucomicrobium 0.01 1147852 1147852 S 1882831 Verrucomicrobium sp. GAS474 0.03 2539107 0 G 1348508 Roseimicrobium 0.03 2539107 0 G1 2711230 unclassified Roseimicrobium 0.03 2539107 2539107 S 2711231 Roseimicrobium sp. ORNL1 0.02 2050564 0 G 518753 Luteolibacter 0.02 2050564 0 G1 2637149 unclassified Luteolibacter 0.02 2050564 2050564 S 2728835 Luteolibacter sp. G-1-1-1 0.04 3282439 0 F 1647988 Akkermansiaceae 0.04 3282439 1736 G 239934 Akkermansia 0.03 2318527 2318503 S 239935 Akkermansia muciniphila 0.00 24 24 S1 349741 Akkermansia muciniphila ATCC BAA-835 0.01 962176 962176 S 1679444 Akkermansia glycaniphila 0.12 10636943 220 C 414999 Opitutae 0.10 9438167 0 O 415000 Opitutales 0.10 9438167 29929 F 134623 Opitutaceae 0.03 3113948 1138 G 178440 Opitutus 0.02 1846037 0 S 107709 Opitutus terrae 0.02 1846037 1846037 S1 452637 Opitutus terrae PB90-1 0.01 1266773 0 G1 2649488 unclassified Opitutus 0.01 1266773 1266773 S 1882749 Opitutus sp. GAS368 0.03 2262257 0 F1 278955 unclassified Opitutaceae 0.03 2262257 2262257 S 794903 Opitutaceae bacterium TAV5 0.02 1469021 0 G 2576890 Nibricoccus 0.02 1469021 1469021 S 2576891 Nibricoccus aquaticus 0.01 1284358 0 G 1961799 Lacunisphaera 0.01 1284358 1284358 S 1838286 Lacunisphaera limnophila 0.01 1278654 0 G 2028344 Ereboglobus 0.01 1278654 1278654 S 1796921 Ereboglobus luteus 0.01 1198556 0 O 415001 Puniceicoccales 0.01 1198556 0 F 415002 Puniceicoccaceae 0.01 1198556 0 G 442430 Coraliomargarita 0.01 1198556 0 S 395922 Coraliomargarita akajimensis 0.01 1198556 1198556 S1 583355 Coraliomargarita akajimensis DSM 45221 0.03 2519855 6 P1 417295 unclassified Verrucomicrobia 0.01 1283717 1283717 S 2488809 Verrucomicrobia bacterium S94 0.01 1236132 1236132 S 1637999 Verrucomicrobia bacterium IMCC26134 0.02 1922426 0 C 1955630 Methylacidiphilae 0.02 1922426 0 O 717963 Methylacidiphilales 0.02 1922426 0 F 717964 Methylacidiphilaceae 0.02 1922426 131798 G 511745 Methylacidiphilum 0.01 681019 0 S 511746 Methylacidiphilum infernorum 0.01 681019 681019 S1 481448 Methylacidiphilum infernorum V4 0.01 586804 0 S 591154 Methylacidiphilum fumariolicum 0.01 586804 586804 S1 1156937 Methylacidiphilum fumariolicum SolV 0.01 522805 0 S 431057 Methylacidiphilum kamchatkense 0.01 522805 522805 S1 1202785 Methylacidiphilum kamchatkense Kam1 0.00 292430 0 C 134549 Spartobacteria 0.00 292430 0 G 134550 Candidatus Xiphinematobacter 0.00 292430 0 G1 2648876 unclassified Candidatus Xiphinematobacter 0.00 292430 292430 S 1704307 Candidatus Xiphinematobacter sp. Idaho Grape 0.12 10579022 0 P 204428 Chlamydiae 0.12 10579022 671 C 204429 Chlamydiia 0.06 5822750 0 O 51291 Chlamydiales 0.06 5822750 0 F 809 Chlamydiaceae 0.06 5822750 0 F1 1113537 Chlamydia/Chlamydophila group 0.06 5822750 257357 G 810 Chlamydia 0.01 1024504 592 G1 2641215 unclassified Chlamydia 0.00 360589 360589 S 1967782 Chlamydia sp. H15-1957-10C 0.00 340186 340186 S 1806891 Chlamydia sp. 2742-308 0.00 323137 323137 S 1967783 Chlamydia sp. S15-834C 0.01 604644 604644 S 83559 Chlamydia suis 0.01 481221 340059 S 83554 Chlamydia psittaci 0.00 80600 80600 S1 1218357 Chlamydia psittaci M56 0.00 40144 40144 S1 1050221 Chlamydia psittaci NJ1 0.00 6067 6067 S1 1218355 Chlamydia psittaci VS225 0.00 4189 4189 S1 1050219 Chlamydia psittaci CP3 0.00 3311 3311 S1 1218358 Chlamydia psittaci WC 0.00 1741 1741 S1 1218356 Chlamydia psittaci WS/RT/E30 0.00 1437 1437 S1 1221877 Chlamydia psittaci 01DC12 0.00 1119 1119 S1 1218176 Chlamydia psittaci 84/55 0.00 581 581 S1 1218354 Chlamydia psittaci MN 0.00 415 415 S1 1218353 Chlamydia psittaci GR9 0.00 410 410 S1 1112267 Chlamydia psittaci 08DC60 0.00 395 395 S1 1112252 Chlamydia psittaci 01DC11 0.00 340 340 S1 331636 Chlamydia psittaci 6BC 0.00 227 227 S1 1112250 Chlamydia psittaci C19/98 0.00 186 186 S1 1112254 Chlamydia psittaci 02DC15 0.01 460186 442572 S 813 Chlamydia trachomatis 0.00 3017 3017 S1 580049 Chlamydia trachomatis B/Jali20/OT 0.00 2518 2518 S1 1431547 Chlamydia trachomatis C/TW-3 0.00 1975 1975 S1 315277 Chlamydia trachomatis A/HAR-13 0.00 1283 1283 S1 707186 Chlamydia trachomatis G/11222 0.00 1127 1127 S1 1071783 Chlamydia trachomatis L3/404/LN 0.00 1017 1017 S1 672161 Chlamydia trachomatis B/TZ1A828/OT 0.00 695 695 S1 1071769 Chlamydia trachomatis L1/440/LN 0.00 512 512 S1 1071758 Chlamydia trachomatis D/SotonD6 0.00 461 461 S1 1071765 Chlamydia trachomatis G/SotonG1 0.00 405 197 S1 1071763 Chlamydia trachomatis F/SW5 0.00 208 208 S2 1100833 Chlamydia trachomatis F/SWFPminus 0.00 392 392 S1 1071757 Chlamydia trachomatis D/SotonD5 0.00 316 316 S1 1071768 Chlamydia trachomatis K/SotonK1 0.00 282 282 S1 1071762 Chlamydia trachomatis F/SW4 0.00 241 241 S1 1100832 Chlamydia trachomatis E/C599 0.00 223 223 S1 564417 Chlamydia trachomatis 6276s 0.00 213 213 S1 1071760 Chlamydia trachomatis E/SotonE4 0.00 201 201 S1 1071756 Chlamydia trachomatis D/SotonD1 0.00 169 169 S1 634464 Chlamydia trachomatis Sweden2 0.00 165 165 S1 1071764 Chlamydia trachomatis F/SotonF3 0.00 163 163 S1 1340853 Chlamydia trachomatis F/11-96 0.00 156 156 S1 1071759 Chlamydia trachomatis E/SW3 0.00 152 152 S1 573237 Chlamydia trachomatis D(s)2923 0.00 149 149 S1 707187 Chlamydia trachomatis G/11074 0.00 144 144 S1 1447714 Chlamydia trachomatis D/CS637/11 0.00 137 137 S1 272561 Chlamydia trachomatis D/UW-3/CX 0.00 130 130 S1 707183 Chlamydia trachomatis E/11023 0.00 123 123 S1 1071761 Chlamydia trachomatis E/SotonE8 0.00 120 120 S1 596777 Chlamydia trachomatis E/Bour 0.00 115 115 S1 707184 Chlamydia trachomatis E/150 0.00 112 112 S1 1071771 Chlamydia trachomatis L1/224 0.00 106 106 S1 580047 Chlamydia trachomatis A2497 0.00 99 99 S1 1071770 Chlamydia trachomatis L1/115 0.00 57 17 S1 1263406 Chlamydia trachomatis L2/434/Bu(i) 0.00 40 40 S2 1262673 Chlamydia trachomatis L2/434/Bu(f) 0.00 50 50 S1 887712 Chlamydia trachomatis L2c 0.00 49 49 S1 1260222 Chlamydia trachomatis IU824 0.00 43 43 S1 1071782 Chlamydia trachomatis L2b/Ams5 0.00 43 43 S1 907265 Chlamydia trachomatis RC-F(s)/852 0.00 41 41 S1 1075085 Chlamydia trachomatis L2b/Canada1 0.00 39 39 S1 1071780 Chlamydia trachomatis L2b/Ams3 0.00 37 37 S1 1071755 Chlamydia trachomatis A/7249 0.00 36 36 S1 1071772 Chlamydia trachomatis L2/25667R 0.00 31 31 S1 1071781 Chlamydia trachomatis L2b/Ams4 0.00 30 30 S1 1071776 Chlamydia trachomatis L2b/CV204 0.00 29 29 S1 658599 Chlamydia trachomatis L2tet1 0.00 28 28 S1 1071766 Chlamydia trachomatis Ia/SotonIa1 0.00 26 26 S1 1071775 Chlamydia trachomatis L2b/LST 0.00 25 25 S1 1071778 Chlamydia trachomatis L2b/Ams1 0.00 21 21 S1 564418 Chlamydia trachomatis 70 0.00 21 21 S1 1071767 Chlamydia trachomatis Ia/SotonIa3 0.00 16 16 S1 1007870 Chlamydia trachomatis RC-L2/55 0.00 14 14 S1 1071754 Chlamydia trachomatis A/5291 0.00 14 14 S1 707185 Chlamydia trachomatis G/9768 0.00 10 10 S1 1071779 Chlamydia trachomatis L2b/Ams2 0.00 9 9 S1 759363 Chlamydia trachomatis D-EC 0.00 7 7 S1 1260223 Chlamydia trachomatis IU888 0.00 6 6 S1 1071774 Chlamydia trachomatis L2b/UCH-2 0.00 6 6 S1 718219 Chlamydia trachomatis G/9301 0.00 4 4 S1 907267 Chlamydia trachomatis RC-J/953 0.00 3 3 S1 1071773 Chlamydia trachomatis L2b/8200/07 0.00 1 1 S1 907272 Chlamydia trachomatis J/6276tet1 0.01 456369 388227 S 85991 Chlamydia pecorum 0.00 29707 29707 S1 1234367 Chlamydia pecorum PV3056/3 0.00 10287 10287 S1 331635 Chlamydia pecorum E58 0.00 8121 8121 S1 1234369 Chlamydia pecorum P787 0.00 7075 7075 S1 1234368 Chlamydia pecorum W73 0.00 5942 5942 S1 1427371 Chlamydia pecorum VR629 0.00 2952 2952 S1 1427369 Chlamydia pecorum MC/MarsBar 0.00 2530 2530 S1 1427368 Chlamydia pecorum IPTaLE 0.00 1528 1528 S1 1427370 Chlamydia pecorum DBDeUG 0.01 451351 436652 S 83555 Chlamydia abortus 0.00 14464 14464 S1 1003238 Chlamydia abortus LLG 0.00 235 235 S1 218497 Chlamydia abortus S26/3 0.00 441389 376204 S 83558 Chlamydia pneumoniae 0.00 61601 61601 S1 406984 Chlamydia pneumoniae LPCoLN 0.00 1757 1757 S1 138677 Chlamydia pneumoniae J138 0.00 1530 1530 S1 182082 Chlamydia pneumoniae TW-183 0.00 214 214 S1 115711 Chlamydia pneumoniae AR39 0.00 83 83 S1 115713 Chlamydia pneumoniae CWL029 0.00 342477 316992 S 1457153 Chlamydia gallinacea 0.00 25485 25485 S1 1143323 Chlamydia gallinacea 08-1274/3 0.00 341176 0 S 83556 Chlamydia felis 0.00 341176 341176 S1 264202 Chlamydia felis Fe/C-56 0.00 330512 0 S 83557 Chlamydia caviae 0.00 330512 330512 S1 227941 Chlamydia caviae GPIC 0.00 319036 316145 S 83560 Chlamydia muridarum 0.00 2761 2735 S1 243161 Chlamydia muridarum str. Nigg 0.00 26 26 S2 1434773 Chlamydia muridarum str. Nigg CM972 0.00 90 90 S1 658600 Chlamydia muridarum MopnTet14 0.00 34 0 S1 1453987 Chlamydia muridarum str. Nigg 2 0.00 34 34 S2 1460373 Chlamydia muridarum str. Nigg 2 MCR 0.00 6 0 S1 1434769 Chlamydia muridarum str. Nigg3 0.00 6 6 S2 1434770 Chlamydia muridarum str. Nigg3 CMUT3-5 0.00 312528 0 S 1457141 Chlamydia avium 0.00 312528 312528 S1 1229831 Chlamydia avium 10DC88 0.05 4755601 552 O 1963360 Parachlamydiales 0.04 3287851 851 F 92713 Parachlamydiaceae 0.02 1617126 1595 G 282132 Candidatus Protochlamydia 0.01 921894 921894 S 389348 Candidatus Protochlamydia naegleriophila 0.01 693637 0 S 362787 Candidatus Protochlamydia amoebophila 0.01 693637 693637 S1 264201 Candidatus Protochlamydia amoebophila UWE25 0.01 908329 0 G 83551 Parachlamydia 0.01 908329 0 S 83552 Parachlamydia acanthamoebae 0.01 908329 908329 S1 765952 Parachlamydia acanthamoebae UV-7 0.01 761545 0 G 112987 Neochlamydia 0.01 761545 0 G1 2643326 unclassified Neochlamydia 0.01 761545 761545 S 1353976 Neochlamydia sp. S13 0.01 803682 0 F 92712 Simkaniaceae 0.01 803682 0 G 34093 Simkania 0.01 803682 0 S 83561 Simkania negevensis 0.01 803682 803682 S1 331113 Simkania negevensis Z 0.01 632340 0 F 92714 Waddliaceae 0.01 632340 0 G 71666 Waddlia 0.01 632340 0 S 71667 Waddlia chondrophila 0.01 632340 632340 S1 716544 Waddlia chondrophila WSU 86-1044 0.00 31176 0 F 412447 Criblamydiaceae 0.00 28331 0 G 340070 Criblamydia 0.00 28331 0 S 340071 Criblamydia sequanensis 0.00 28331 28331 S1 1437425 Criblamydia sequanensis CRIB-18 0.00 2845 0 G 483422 Estrella 0.00 2845 2845 S 483423 Estrella lausannensis 0.02 2088835 152 P 134625 Kiritimatiellaeota 0.01 1211937 0 P1 2599933 unclassified Kiritimatiellaeota 0.01 1211937 1211937 S 2697043 Kiritimatiellaeota bacterium S-5007 0.01 876746 0 C 1921781 Kiritimatiellae 0.01 876746 0 O 1921782 Kiritimatiellales 0.01 876746 0 F 1921783 Kiritimatiellaceae 0.01 876746 0 G 1921784 Kiritimatiella 0.01 876746 876746 S 1307763 Kiritimatiella glycovorans 0.02 1608930 0 P 256845 Lentisphaerae 0.02 1608930 0 C 1313211 Lentisphaeria 0.02 1608930 0 O 278082 Victivallales 0.02 1608930 0 O1 1674876 unclassified Victivallales 0.02 1608930 1608930 S 2094242 Victivallales bacterium CCUG 44730 0.52 47221495 0 P 203691 Spirochaetes 0.52 47221495 590 C 203692 Spirochaetia 0.33 29421684 400 O 136 Spirochaetales 0.26 23087525 1912 F 137 Spirochaetaceae 0.14 12917089 683789 G 157 Treponema 0.02 2169964 132243 G1 2638727 unclassified Treponema 0.01 744732 744732 S 120683 Treponema sp. OMZ 804 0.01 678803 678803 S 1539298 Treponema sp. OMZ 838 0.01 614186 614186 S 2766701 Treponema sp. Marseille-Q4132 0.02 1630476 933499 S 158 Treponema denticola 0.00 203824 203824 S1 999434 Treponema denticola OTK 0.00 185695 185695 S1 999431 Treponema denticola H1-T 0.00 146762 146762 S1 999426 Treponema denticola AL-2 0.00 140146 140146 S1 999432 Treponema denticola H-22 0.00 19378 19378 S1 243275 Treponema denticola ATCC 35405 0.00 1172 1172 S1 999430 Treponema denticola ATCC 35404 0.01 1277647 0 S 88058 Treponema primitia 0.01 1277647 1277647 S1 545694 Treponema primitia ZAS-2 0.01 1206627 0 S 150829 Treponema azotonutricium 0.01 1206627 1206627 S1 545695 Treponema azotonutricium ZAS-9 0.01 1015541 1015541 S 162 Treponema phagedenis 0.01 1010914 0 S 215591 Treponema caldarium 0.01 1010914 1010914 S1 744872 Treponema caldarium DSM 7334 0.01 923370 0 S 81028 Treponema brennaborense 0.01 923370 923370 S1 906968 Treponema brennaborense DSM 12168 0.01 798589 0 S 167 Treponema succinifaciens 0.01 798589 798589 S1 869209 Treponema succinifaciens DSM 2489 0.01 787129 0 S 409322 Treponema pedis 0.01 787129 787129 S1 1291379 Treponema pedis str. T A4 0.01 655542 0 S 53419 Treponema socranskii 0.01 655542 655542 S1 69713 Treponema socranskii subsp. buccale 0.01 617985 617985 S 221027 Treponema putidum 0.00 81592 69468 S 160 Treponema pallidum 0.00 6277 5219 S1 161 Treponema pallidum subsp. pallidum 0.00 666 666 S2 1095955 Treponema pallidum subsp. pallidum str. Sea 81-4 0.00 150 150 S2 686990 Treponema pallidum subsp. pallidum str. Mexico A 0.00 132 132 S2 243276 Treponema pallidum subsp. pallidum str. Nichols 0.00 45 45 S2 455434 Treponema pallidum subsp. pallidum SS14 0.00 38 38 S2 491081 Treponema pallidum subsp. pallidum DAL-1 0.00 27 27 S2 666714 Treponema pallidum subsp. pallidum str. Chicago 0.00 3193 2119 S1 168 Treponema pallidum subsp. pertenue 0.00 395 395 S2 491080 Treponema pallidum subsp. pertenue str. Gauthier 0.00 340 340 S2 491079 Treponema pallidum subsp. pertenue str. CDC2 0.00 339 339 S2 491078 Treponema pallidum subsp. pertenue str. SamoaD 0.00 1974 1821 S1 53436 Treponema pallidum subsp. endemicum 0.00 153 153 S2 1155776 Treponema pallidum subsp. endemicum str. Bosnia A 0.00 680 680 S1 1155775 Treponema pallidum str. Fribourg-Blanc 0.00 57924 0 S 53435 Treponema paraluiscuniculi 0.00 57924 57924 S1 545776 Treponema paraluiscuniculi Cuniculi A 0.04 3376486 39 G 146 Spirochaeta 0.01 1232475 307720 S 154 Spirochaeta thermophila 0.01 470669 470669 S1 869211 Spirochaeta thermophila DSM 6578 0.01 454086 454086 S1 665571 Spirochaeta thermophila DSM 6192 0.01 1106090 1106090 S 252967 Spirochaeta perfilievii 0.01 1037882 0 S 46355 Spirochaeta africana 0.01 1037882 1037882 S1 889378 Spirochaeta africana DSM 8902 0.03 2884851 2089 G 399320 Sphaerochaeta 0.01 1137624 0 S 1131707 Sphaerochaeta pleomorpha 0.01 1137624 1137624 S1 158190 Sphaerochaeta pleomorpha str. Grapes 0.01 1051881 0 S 1131703 Sphaerochaeta globosa 0.01 1051881 1051881 S1 158189 Sphaerochaeta globosa str. Buddy 0.01 693257 0 S 273376 Sphaerochaeta coccoides 0.01 693257 693257 S1 760011 Sphaerochaeta coccoides DSM 17374 0.02 1466525 0 G 1911556 Sediminispirochaeta 0.02 1466525 0 S 55206 Sediminispirochaeta smaragdinae 0.02 1466525 1466525 S1 573413 Sediminispirochaeta smaragdinae DSM 11293 0.01 1255656 0 G 2035349 Oceanispirochaeta 0.01 1255656 0 G1 2635722 unclassified Oceanispirochaeta 0.01 1255656 1255656 S 2518645 Oceanispirochaeta sp. K2 0.01 1185006 0 G 1616789 Salinispira 0.01 1185006 1185006 S 1307761 Salinispira pacifica 0.07 6333759 41752 F 1643685 Borreliaceae 0.04 3799840 590022 G 138 Borrelia 0.01 667644 666355 S 47466 Borrelia miyamotoi 0.00 1154 1154 S1 1292392 Borrelia miyamotoi FR64b 0.00 135 135 S1 1302858 Borrelia miyamotoi LB-2001 0.01 619527 478906 S 140 Borrelia hermsii 0.00 101050 101050 S1 1313295 Borrelia hermsii YBT 0.00 24756 24756 S1 1293576 Borrelia hermsii YOR 0.00 10849 10849 S1 1313291 Borrelia hermsii MTW 0.00 2265 2265 S1 1329908 Borrelia hermsii CC1 0.00 1609 1609 S1 1867252 Borrelia hermsii HS1 0.00 92 92 S1 314723 Borrelia hermsii DAH 0.00 387019 0 S 144 Borrelia coriaceae 0.00 387019 387019 S1 1408429 Borrelia coriaceae ATCC 43381 0.00 317464 0 S 229155 Borrelia turcica 0.00 317464 317464 S1 1104446 Borrelia turcica IST7 0.00 284627 0 G1 2649934 unclassified Borrelia 0.00 284627 284627 S 2608247 Borrelia sp. A-FGy1 0.00 241818 234278 S 143 Borrelia anserina 0.00 6570 6570 S1 1365188 Borrelia anserina Es 0.00 970 970 S1 1313293 Borrelia anserina BA2 0.00 236807 52370 S 29520 Borrelia crocidurae 0.00 110768 110768 S1 1293575 Borrelia crocidurae DOU 0.00 73669 73669 S1 1155096 Borrelia crocidurae str. Achema 0.00 197078 158002 S 142 Borrelia turicatae 0.00 39076 39076 S1 314724 Borrelia turicatae 91E135 0.00 133145 80866 S 141 Borrelia parkeri 0.00 26715 26715 S1 1435045 Borrelia parkeri HR1 0.00 25564 25564 S1 1313294 Borrelia parkeri SLO 0.00 82356 6245 S 40834 Borrelia duttonii 0.00 76111 76111 S1 412419 Borrelia duttonii Ly 0.00 42333 0 S 44449 Borrelia recurrentis 0.00 42333 42333 S1 412418 Borrelia recurrentis A1 0.03 2492167 527781 G 64895 Borreliella 0.00 353703 276886 S 139 Borreliella burgdorferi 0.00 16225 16225 S1 521007 Borreliella burgdorferi N40 0.00 12626 12626 S1 521008 Borreliella burgdorferi JD1 0.00 10703 10703 S1 498738 Borreliella burgdorferi 29805 0.00 5807 5807 S1 498737 Borreliella burgdorferi WI91-23 0.00 5734 5734 S1 445985 Borreliella burgdorferi ZS7 0.00 4584 4584 S1 445984 Borreliella burgdorferi Bol26 0.00 4441 4441 S1 498739 Borreliella burgdorferi CA-11.2A 0.00 3095 3095 S1 445983 Borreliella burgdorferi 156a 0.00 3044 3044 S1 498740 Borreliella burgdorferi 64b 0.00 2851 2851 S1 521009 Borreliella burgdorferi 297 0.00 2613 2613 S1 476210 Borreliella burgdorferi 118a 0.00 1492 1492 S1 476212 Borreliella burgdorferi 94a 0.00 1427 1427 S1 1328311 Borreliella burgdorferi CA382 0.00 1350 1350 S1 224326 Borreliella burgdorferi B31 0.00 825 825 S1 476211 Borreliella burgdorferi 72a 0.00 287295 287295 S 1964448 Candidatus Borrelia tachyglossi 0.00 259401 201358 S 29518 Borreliella afzelii 0.00 22942 22942 S1 390236 Borreliella afzelii PKo 0.00 11981 11981 S1 411555 Borreliella afzelii K78 0.00 9971 9971 S1 445986 Borreliella afzelii ACA-1 0.00 7086 7086 S1 1239934 Borreliella afzelii HLJ01 0.00 6063 6063 S1 1398490 Borreliella afzelii Tom3107 0.00 237207 157447 S 29519 Borreliella garinii 0.00 31711 31711 S1 498743 Borreliella garinii PBr 0.00 27083 27083 S1 1081646 Borreliella garinii BgVir 0.00 20929 20929 S1 519049 Borreliella garinii Far04 0.00 23 23 S1 1234596 Borreliella garinii NMJW1 0.00 14 14 S1 1421551 Borreliella garinii SZ 0.00 195410 125225 S 62088 Borreliella valaisiana 0.00 54581 54581 S1 445987 Borreliella valaisiana VS116 0.00 15604 15604 S1 1398491 Borreliella valaisiana Tom4006 0.00 183243 183243 S 1476873 Borrelia sp. CA690 0.00 163251 0 S 64897 Borreliella bissettii 0.00 163251 163251 S1 521010 Borreliella bissettii DN127 0.00 147912 147912 S 1674146 Borrelia mayonii 0.00 72327 0 S 664662 Borreliella bavariensis 0.00 72327 72327 S1 290434 Borreliella bavariensis PBi 0.00 33298 33298 S 498741 Borreliella finlandensis 0.00 31339 0 S 88916 Borreliella spielmanii 0.00 31339 31339 S1 498742 Borreliella spielmanii A14S 0.15 13712515 0 O 1643688 Leptospirales 0.15 13712515 49 F 170 Leptospiraceae 0.14 12342395 614703 G 171 Leptospira 0.03 2471955 1886937 S 173 Leptospira interrogans 0.00 186486 186486 S1 214675 Leptospira interrogans serovar Manilae 0.00 124149 124149 S1 211880 Leptospira interrogans serovar Canicola 0.00 66933 66933 S1 338215 Leptospira interrogans serovar Bratislava 0.00 60273 51883 S1 176 Leptospira interrogans serovar Hardjo 0.00 6414 6414 S2 1279460 Leptospira interrogans serovar Hardjo str. Norma 0.00 1976 1976 S2 38347 Leptospira interrogans serovar Hardjo-prajitno 0.00 58671 0 S1 290341 Leptospira interrogans serovar Linhai 0.00 58671 58671 S2 1395589 Leptospira interrogans serovar Linhai str. 56609 0.00 50557 50557 S1 766041 Leptospira interrogans serovar Copenhageni/Icterohaemorrhagiae 0.00 34545 33302 S1 57678 Leptospira interrogans serovar Lai 0.00 726 726 S2 189518 Leptospira interrogans serovar Lai str. 56601 0.00 517 517 S2 573825 Leptospira interrogans serovar Lai str. IPAV 0.00 3404 2507 S1 44275 Leptospira interrogans serovar Copenhageni 0.00 897 897 S2 267671 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 0.02 2028315 1848934 S 28183 Leptospira santarosai 0.00 179381 0 S1 293071 Leptospira santarosai serovar Shermani 0.00 179381 179381 S2 758847 Leptospira santarosai serovar Shermani str. LT 821 0.02 1359360 1359360 S 2564040 Leptospira tipperaryensis 0.01 1286710 1286710 S 408139 Leptospira kmetyi 0.01 1272549 1183588 S 174 Leptospira borgpetersenii 0.00 81762 81762 S1 508536 Leptospira borgpetersenii serovar Ceylonica 0.00 4515 3760 S1 338217 Leptospira borgpetersenii serovar Hardjo-bovis 0.00 562 562 S2 355277 Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 0.00 193 193 S2 355276 Leptospira borgpetersenii serovar Hardjo-bovis str. L550 0.00 1350 1350 S1 328971 Leptospira borgpetersenii serovar Hardjo 0.00 1011 1011 S1 280505 Leptospira borgpetersenii serovar Ballum 0.00 323 323 S1 1141102 Leptospira borgpetersenii str. 4E 0.01 1194164 0 S 172 Leptospira biflexa 0.01 1194164 1192800 S1 145259 Leptospira biflexa serovar Patoc 0.00 717 717 S2 355278 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 0.00 647 647 S2 456481 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 0.01 1146041 1145446 S 1137606 Leptospira mayottensis 0.00 595 595 S1 1192864 Leptospira mayottensis 200901116 0.01 968598 968598 S 28184 Leptospira weilii 0.02 1370071 0 G 338321 Turneriella 0.02 1370071 0 S 29510 Turneriella parva 0.02 1370071 1370071 S1 869212 Turneriella parva DSM 21527 0.05 4086706 0 O 1643686 Brachyspirales 0.05 4086706 0 F 143786 Brachyspiraceae 0.05 4086706 342932 G 29521 Brachyspira 0.01 1080462 663746 S 52584 Brachyspira pilosicoli 0.00 153413 153413 S1 1161918 Brachyspira pilosicoli WesB 0.00 111582 111582 S1 1133568 Brachyspira pilosicoli B2904 0.00 76795 76795 S1 759914 Brachyspira pilosicoli 95/1000 0.00 74926 74926 S1 1042417 Brachyspira pilosicoli P43/6/78 0.01 713827 592950 S 159 Brachyspira hyodysenteriae 0.00 75000 75000 S1 1266923 Brachyspira hyodysenteriae ATCC 27164 0.00 45877 45877 S1 565034 Brachyspira hyodysenteriae WA1 0.01 698444 0 S 84378 Brachyspira murdochii 0.01 698444 698444 S1 526224 Brachyspira murdochii DSM 12563 0.01 630803 630803 S 1287055 Brachyspira hampsonii 0.01 620238 0 S 84377 Brachyspira intermedia 0.01 620238 620238 S1 1045858 Brachyspira intermedia PWS/A 0.33 30035111 1039 P 57723 Acidobacteria 0.29 26540604 1532 C 204432 Acidobacteriia 0.26 23417252 0 O 204433 Acidobacteriales 0.26 23417252 40310 F 204434 Acidobacteriaceae 0.07 6698227 4337 G 392733 Terriglobus 0.03 3057802 1552985 S 392734 Terriglobus roseus 0.02 1504817 1504817 S1 926566 Terriglobus roseus DSM 18391 0.02 2016646 2016646 S 1592106 Terriglobus albidus 0.02 1619442 0 S 870903 Terriglobus saanensis 0.02 1619442 1619442 S1 401053 Terriglobus saanensis SP1PR4 0.07 6384825 11174 G 940557 Granulicella 0.03 2690422 1500 G1 2621151 unclassified Granulicella 0.02 1456609 1456609 S 2602070 Granulicella sp. WH15 0.01 1232313 1232313 S 1617967 Granulicella sp. 5B5 0.02 1964597 0 S 940614 Granulicella mallensis 0.02 1964597 1964597 S1 682795 Granulicella mallensis MP5ACTX8 0.02 1718632 0 S 940615 Granulicella tundricola 0.02 1718632 1718632 S1 1198114 Granulicella tundricola MP5ACTX9 0.04 3292158 1002 G 33973 Acidobacterium 0.02 1997663 0 G1 2625945 unclassified Acidobacterium 0.02 1997663 1997663 S 2763107 Acidobacterium sp. 4Y35 0.01 1293493 0 S 33075 Acidobacterium capsulatum 0.01 1293493 1293493 S1 240015 Acidobacterium capsulatum ATCC 51196 0.03 2803845 0 G 388463 Edaphobacter 0.03 2803845 4090 G1 2637509 unclassified Edaphobacter 0.02 1444178 1444178 S 2703788 Edaphobacter sp. 12200R-103 0.02 1355577 1355577 S 2763071 Edaphobacter sp. 4G125 0.03 2395271 0 G 2608728 Acidisarcina 0.03 2395271 2395271 S 2211140 Acidisarcina polymorpha 0.02 1802616 0 G 658061 Candidatus Koribacter 0.02 1802616 0 S 658062 Candidatus Koribacter versatilis 0.02 1802616 1802616 S1 204669 Candidatus Koribacter versatilis Ellin345 0.03 3121820 0 O 332160 Bryobacterales 0.03 3121820 0 F 332161 Solibacteraceae 0.03 3121820 0 G 332162 Candidatus Solibacter 0.03 3121820 0 S 332163 Candidatus Solibacter usitatus 0.03 3121820 3121820 S1 234267 Candidatus Solibacter usitatus Ellin6076 0.03 2327006 0 C 1813735 Vicinamibacteria 0.03 2327006 0 F 2211325 Vicinamibacteraceae 0.03 2327006 0 G 2004797 Luteitalea 0.03 2327006 2327006 S 1855912 Luteitalea pratensis 0.01 1166462 0 C 1562566 Blastocatellia 0.01 1166462 0 G 458032 Chloracidobacterium 0.01 1166462 0 S 458033 Chloracidobacterium thermophilum 0.01 1166462 1166462 S1 981222 Chloracidobacterium thermophilum B 0.24 21240931 0 P 32066 Fusobacteria 0.24 21240931 0 C 203490 Fusobacteriia 0.24 21240931 19442 O 203491 Fusobacteriales 0.15 13302258 1487 F 203492 Fusobacteriaceae 0.14 12431897 1596513 G 848 Fusobacterium 0.03 2755483 876024 S 851 Fusobacterium nucleatum 0.01 787084 562931 S1 76859 Fusobacterium nucleatum subsp. animalis 0.00 89835 89835 S2 457405 Fusobacterium nucleatum subsp. animalis 7_1 0.00 71956 71956 S2 469607 Fusobacterium nucleatum subsp. animalis 4_8 0.00 62362 62362 S2 469601 Fusobacterium nucleatum subsp. animalis 21_1A 0.01 521606 520826 S1 76857 Fusobacterium nucleatum subsp. polymorphum 0.00 780 780 S2 393480 Fusobacterium nucleatum subsp. polymorphum ATCC 10953 0.00 349093 284087 S1 76856 Fusobacterium nucleatum subsp. nucleatum 0.00 64795 64795 S2 525283 Fusobacterium nucleatum subsp. nucleatum ATCC 23726 0.00 211 211 S2 1307428 Fusobacterium nucleatum subsp. nucleatum ChDC F316 0.00 221676 112500 S1 155615 Fusobacterium nucleatum subsp. vincentii 0.00 56784 56784 S2 1307427 Fusobacterium nucleatum subsp. vincentii ChDC F8 0.00 52392 52392 S2 469602 Fusobacterium nucleatum subsp. vincentii 3_1_27 0.02 1508932 807575 S 861 Fusobacterium ulcerans 0.01 701357 701357 S1 469617 Fusobacterium ulcerans ATCC 49185 0.02 1485793 1470392 S 856 Fusobacterium varium 0.00 15401 15401 S1 469618 Fusobacterium varium ATCC 27725 0.01 1224953 1224953 S 2663009 Fusobacterium pseudoperiodonticum 0.01 1213405 703827 S 859 Fusobacterium necrophorum 0.01 509046 509046 S1 143387 Fusobacterium necrophorum subsp. funduliforme 0.00 532 532 S1 143388 Fusobacterium necrophorum subsp. necrophorum 0.01 711793 42 G1 2648384 unclassified Fusobacterium 0.01 533868 533868 S 2764326 Fusobacterium sp. NSJ-57 0.00 177883 177883 S 671211 Fusobacterium sp. oral taxon 203 0.01 710138 0 S 850 Fusobacterium mortiferum 0.01 710138 710138 S1 469616 Fusobacterium mortiferum ATCC 9817 0.01 643929 471888 S 1583098 Fusobacterium hwasookii 0.00 101743 101743 S1 1307442 Fusobacterium hwasookii ChDC F174 0.00 35845 35845 S1 1307444 Fusobacterium hwasookii ChDC F300 0.00 34453 34453 S1 1307443 Fusobacterium hwasookii ChDC F206 0.00 436127 0 S 849 Fusobacterium gonidiaformans 0.00 436127 436127 S1 469615 Fusobacterium gonidiaformans ATCC 25563 0.00 144831 144831 S 860 Fusobacterium periodonticum 0.01 868874 0 G 167639 Ilyobacter 0.01 868874 0 S 167642 Ilyobacter polytropus 0.01 868874 868874 S1 572544 Ilyobacter polytropus DSM 2926 0.09 7919231 9555 F 1129771 Leptotrichiaceae 0.06 5323281 733781 G 32067 Leptotrichia 0.01 1351467 55042 G1 2633022 unclassified Leptotrichia 0.01 611704 611704 S 712357 Leptotrichia sp. oral taxon 212 0.00 353599 353599 S 1785996 Leptotrichia sp. oral taxon 847 0.00 331122 331122 S 712368 Leptotrichia sp. oral taxon 498 0.01 1003739 1003739 S 157687 Leptotrichia wadei 0.01 790408 790408 S 109328 Leptotrichia trevisanii 0.00 405197 0 S 40542 Leptotrichia buccalis 0.00 405197 405197 S1 523794 Leptotrichia buccalis C-1013-b 0.00 388857 388857 S 157688 Leptotrichia hofstadii 0.00 342819 342819 S 554406 Leptotrichia hongkongensis 0.00 307013 307013 S 157691 Leptotrichia shahii 0.01 1228587 0 G 32068 Sebaldella 0.01 1228587 0 S 826 Sebaldella termitidis 0.01 1228587 1228587 S1 526218 Sebaldella termitidis ATCC 33386 0.01 580901 0 G 2755140 Pseudoleptotrichia 0.01 580901 580901 S 157692 Pseudoleptotrichia goodfellowii 0.00 413533 0 G 34104 Streptobacillus 0.00 413533 413415 S 34105 Streptobacillus moniliformis 0.00 118 118 S1 519441 Streptobacillus moniliformis DSM 12112 0.00 363374 0 G 168808 Sneathia 0.00 363374 363374 S 187101 Sneathia amnii 0.17 15203059 0 P 200918 Thermotogae 0.17 15203059 2451 C 188708 Thermotogae 0.10 9467276 1670 O 2419 Thermotogales 0.06 5395250 12582 F 188709 Thermotogaceae 0.04 3298784 1238928 G 2335 Thermotoga 0.01 691616 0 S 1508420 Thermotoga profunda 0.01 691616 691616 S1 1408160 Thermotoga profunda AZM34c06 0.01 643897 0 S 1508419 Thermotoga caldifontis 0.01 643897 643897 S1 1408159 Thermotoga caldifontis AZM44c09 0.00 386788 50619 G1 2631113 unclassified Thermotoga 0.00 153798 153798 S 1157948 Thermotoga sp. 2812B 0.00 95071 95071 S 126738 Thermotoga sp. RQ7 0.00 48127 48127 S 126740 Thermotoga sp. RQ2 0.00 39173 39173 S 1157947 Thermotoga sp. Cell2 0.00 111116 0 S 93929 Thermotoga petrophila 0.00 111116 111116 S1 390874 Thermotoga petrophila RKU-1 0.00 89392 0 S 2337 Thermotoga neapolitana 0.00 89392 89392 S1 309803 Thermotoga neapolitana DSM 4359 0.00 72747 72054 S 2336 Thermotoga maritima 0.00 693 693 S1 243274 Thermotoga maritima MSB8 0.00 64300 0 S 93930 Thermotoga naphthophila 0.00 64300 64300 S1 590168 Thermotoga naphthophila RKU-10 0.02 2083884 590732 G 1643951 Pseudothermotoga 0.01 691640 0 S 57487 Pseudothermotoga hypogea 0.01 691640 691640 S1 1123384 Pseudothermotoga hypogea DSM 11164 = NBRC 106472 0.01 646577 0 S 119394 Pseudothermotoga thermarum 0.01 646577 646577 S1 688269 Pseudothermotoga thermarum DSM 5069 0.00 81160 0 S 38322 Pseudothermotoga elfii 0.00 81160 81160 S1 1123383 Pseudothermotoga elfii DSM 9442 = NBRC 107921 0.00 73775 0 S 177758 Pseudothermotoga lettingae 0.00 73775 73775 S1 416591 Pseudothermotoga lettingae TMO 0.05 4070356 1260 F 1643950 Fervidobacteriaceae 0.03 2474659 590700 G 2422 Fervidobacterium 0.01 1090065 597168 S 93466 Fervidobacterium pennivorans 0.01 492897 492897 S1 771875 Fervidobacterium pennivorans DSM 9078 0.01 570166 0 S 2424 Fervidobacterium nodosum 0.01 570166 570166 S1 381764 Fervidobacterium nodosum Rt17-B1 0.00 117690 117690 S 310769 Fervidobacterium changbaicum 0.00 106038 106038 S 2423 Fervidobacterium islandicum 0.02 1594437 5604 G 2420 Thermosipho 0.01 552911 0 S 2421 Thermosipho africanus 0.01 552911 552911 S1 484019 Thermosipho africanus TCF52B 0.01 531683 531652 S 46541 Thermosipho melanesiensis 0.00 31 31 S1 391009 Thermosipho melanesiensis BI429 0.01 504239 478426 G1 2676525 unclassified Thermosipho (in: Bacteria) 0.00 15092 15092 S 1437364 Thermosipho sp. 1070 0.00 10721 10721 S 1462747 Thermosipho sp. 1063 0.04 3213362 0 O 1643946 Kosmotogales 0.04 3213362 324 F 1643948 Kosmotogaceae 0.02 1824472 3660 G 1184396 Mesotoga 0.01 917546 917546 S 1236046 Mesotoga infera 0.01 903266 0 S 1184387 Mesotoga prima 0.01 903266 903266 S1 660470 Mesotoga prima MesG1.Ag.4.2 0.02 1388566 2624 G 651456 Kosmotoga 0.01 699487 0 S 651457 Kosmotoga olearia 0.01 699487 699487 S1 521045 Kosmotoga olearia TBF 19.5.1 0.01 686455 686455 S 1330330 Kosmotoga pacifica 0.02 1890385 0 O 1643947 Petrotogales 0.02 1890385 950 F 1643949 Petrotogaceae 0.01 676736 527620 G 160798 Marinitoga 0.00 80313 0 G1 2640159 unclassified Marinitoga 0.00 80313 80313 S 1545835 Marinitoga sp. 1137 0.00 68803 0 S 149715 Marinitoga piezophila 0.00 68803 68803 S1 443254 Marinitoga piezophila KA3 0.01 633375 0 G 28236 Petrotoga 0.01 633375 0 S 69499 Petrotoga mobilis 0.01 633375 633375 S1 403833 Petrotoga mobilis SJ95 0.01 579324 0 G 1511648 Defluviitoga 0.01 579324 579324 S 1006576 Defluviitoga tunisiensis 0.01 629585 0 O 1769716 Mesoaciditogales 0.01 629585 0 F 1769717 Mesoaciditogaceae 0.01 629585 0 G 1769718 Athalassotoga 0.01 629585 629585 S 1441386 Athalassotoga saccharophila 0.10 9218515 0 P 40117 Nitrospirae 0.10 9218515 0 C 203693 Nitrospira 0.10 9218515 0 O 189778 Nitrospirales 0.10 9218515 80 F 189779 Nitrospiraceae 0.07 6575070 10371 G 1234 Nitrospira 0.02 1435796 0 G1 2652172 unclassified Nitrospira 0.02 1435796 1435796 S 1936990 Nitrospira sp. KM1 0.02 1424098 1424098 S 42253 Nitrospira moscoviensis 0.02 1365183 1365183 S 330214 Nitrospira defluvii 0.01 1295772 1295772 S 1325564 Nitrospira japonica 0.01 1043850 1043850 S 1715989 Candidatus Nitrospira inopinata 0.02 2068561 513196 G 179 Leptospirillum 0.01 810660 0 G1 655606 Leptospirillum sp. Group I 0.01 810660 15860 S 180 Leptospirillum ferrooxidans 0.01 794800 794800 S1 1162668 Leptospirillum ferrooxidans C2-3 0.01 451248 0 G1 261386 Leptospirillum sp. Group III 0.01 451248 120278 S 178606 Leptospirillum ferriphilum 0.00 179192 179192 S1 1048260 Leptospirillum ferriphilum ML-04 0.00 151778 151778 S1 1441628 Leptospirillum ferriphilum YSK 0.00 293457 0 G1 261385 Leptospirillum sp. Group II 0.00 293457 293457 S 1660083 Leptospirillum sp. Group II 'CF-1' 0.01 574804 0 G 28261 Thermodesulfovibrio 0.01 574804 0 S 28262 Thermodesulfovibrio yellowstonii 0.01 574804 574804 S1 289376 Thermodesulfovibrio yellowstonii DSM 11347 0.08 7014905 0 P 200783 Aquificae 0.08 7014905 262 C 187857 Aquificae 0.07 6008862 974 O 32069 Aquificales 0.04 3838061 3618 F 64898 Aquificaceae 0.02 1412200 1009 G 75905 Thermocrinis 0.01 486839 486839 S 75906 Thermocrinis ruber 0.01 483579 0 S 136094 Thermocrinis albus 0.01 483579 483579 S1 638303 Thermocrinis albus DSM 14484 0.00 440773 440773 S 381751 Thermocrinis minervae 0.01 1133774 624 G 939 Hydrogenobacter 0.01 577450 0 G1 2647298 unclassified Hydrogenobacter 0.01 577450 577450 S 1632019 Hydrogenobacter sp. T-8 0.01 555700 0 S 940 Hydrogenobacter thermophilus 0.01 555700 555700 S1 608538 Hydrogenobacter thermophilus TK-6 0.01 788962 0 G 168657 Hydrogenobaculum 0.01 788962 466315 G1 2622382 unclassified Hydrogenobaculum 0.00 322437 322437 S 380749 Hydrogenobaculum sp. Y04AAS1 0.00 101 101 S 547144 Hydrogenobaculum sp. HO 0.00 45 45 S 547146 Hydrogenobaculum sp. SN 0.00 33 33 S 547145 Hydrogenobaculum sp. SHO 0.00 31 31 S 547143 Hydrogenobaculum sp. 3684 0.01 499507 0 G 2713 Aquifex 0.01 499507 0 S 63363 Aquifex aeolicus 0.01 499507 499507 S1 224324 Aquifex aeolicus VF5 0.02 1590298 605 F 224027 Hydrogenothermaceae 0.01 979010 1692 G 212790 Sulfurihydrogenibium 0.01 510322 0 G1 2619248 unclassified Sulfurihydrogenibium 0.01 510322 510322 S 436114 Sulfurihydrogenibium sp. YO3AOP1 0.01 466996 0 S 309806 Sulfurihydrogenibium azorense 0.01 466996 466996 S1 204536 Sulfurihydrogenibium azorense Az-Fu1 0.01 610683 0 G 182899 Persephonella 0.01 610683 0 S 309805 Persephonella marina 0.01 610683 610683 S1 123214 Persephonella marina EX-H1 0.01 579529 0 O1 90150 Aquificales genera incertae sedis 0.01 579529 0 G 412592 Thermosulfidibacter 0.01 579529 0 S 412593 Thermosulfidibacter takaii 0.01 579529 579529 S1 1298851 Thermosulfidibacter takaii ABI70S6 0.01 1005781 0 O 1485951 Desulfurobacteriales 0.01 1005781 556 F 558314 Desulfurobacteriaceae 0.01 568443 0 G 171868 Thermovibrio 0.01 568443 0 S 228745 Thermovibrio ammonificans 0.01 568443 568443 S1 648996 Thermovibrio ammonificans HB-1 0.00 436782 0 G 64159 Desulfurobacterium 0.00 436782 0 S 64160 Desulfurobacterium thermolithotrophum 0.00 436782 436782 S1 868864 Desulfurobacterium thermolithotrophum DSM 11699 0.06 5553669 0 P 508458 Synergistetes 0.06 5553669 0 C 649775 Synergistia 0.06 5553669 0 O 649776 Synergistales 0.06 5553669 4556 F 649777 Synergistaceae 0.01 1185948 7567 G 81461 Thermanaerovibrio 0.01 601389 0 S 108007 Thermanaerovibrio velox 0.01 601389 601389 S1 926567 Thermanaerovibrio velox DSM 12556 0.01 576992 0 S 81462 Thermanaerovibrio acidaminovorans 0.01 576992 576992 S1 525903 Thermanaerovibrio acidaminovorans DSM 6589 0.01 1096644 0 G 508459 Cloacibacillus 0.01 1096644 1096644 S 1197717 Cloacibacillus porcorum 0.01 815020 0 G 81411 Aminomonas 0.01 815020 0 S 81412 Aminomonas paucivorans 0.01 815020 815020 S1 584708 Aminomonas paucivorans DSM 12260 0.01 685555 0 G 49894 Acetomicrobium 0.01 685555 0 S 97477 Acetomicrobium mobile 0.01 685555 685555 S1 891968 Acetomicrobium mobile DSM 13181 0.01 621823 0 G 81466 Aminobacterium 0.01 621823 0 S 81468 Aminobacterium colombiense 0.01 621823 621823 S1 572547 Aminobacterium colombiense DSM 12261 0.01 619977 0 G 336260 Thermovirga 0.01 619977 0 S 336261 Thermovirga lienii 0.01 619977 619977 S1 580340 Thermovirga lienii DSM 17291 0.01 524146 0 G 428711 Jonquetella 0.01 524146 0 S 428712 Jonquetella anthropi 0.01 524146 524146 S1 885272 Jonquetella anthropi DSM 22815 0.06 5416100 2 D1 2323 Bacteria incertae sedis 0.05 4798449 21 D2 1783234 Bacteria candidate phyla 0.04 3242161 222762 P 95818 Candidatus Saccharibacteria 0.03 2696315 330849 P1 1895827 unclassified Saccharibacteria 0.02 1530545 1530545 S 713059 Candidatus Saccharibacteria bacterium oral taxon 488 0.01 466231 466231 S 2056494 Candidatus Saccharibacteria bacterium YM_S32_TM7_50_20 0.00 224110 224110 S 2572088 Candidatus Saccharibacteria bacterium oral taxon 957 0.00 144580 144580 S 2572087 Candidatus Saccharibacteria bacterium oral taxon 955 0.00 322919 0 G 1331051 Candidatus Saccharimonas 0.00 322919 322919 S 1332188 Candidatus Saccharimonas aalborgensis 0.00 105 105 S 2572089 TM7 phylum sp. oral taxon 952 0.00 60 60 S 1476577 Candidatus Saccharibacteria oral taxon TM7x 0.01 636443 86 D3 95901 Candidatus Dependentiae 0.00 336473 0 D4 1104668 unclassified Candidatus Dependentiae 0.00 336473 336473 S 2066483 Candidatus Dependentiae bacterium (ex Spumella elongata CCAP 955/1) 0.00 299884 0 C 2497643 Candidatus Babeliae 0.00 299884 0 O 2497644 Candidatus Babeliales 0.00 299884 0 F 2497645 Candidatus Babeliaceae 0.00 299884 0 G 1551504 Candidatus Babela 0.00 299884 299884 S 673862 Candidatus Babela massiliensis 0.01 504613 0 D3 1783273 Patescibacteria group 0.00 254983 0 D4 1794810 Microgenomates group 0.00 254983 0 D5 2715732 Microgenomates group incertae sedis 0.00 254983 0 F 2715733 Candidatus Chazhemtobacteraceae 0.00 254983 0 G 2715734 Candidatus Chazhemtobacterium 0.00 254983 254983 S 2715735 Candidatus Chazhemtobacterium aquaticus 0.00 249630 0 P 363464 Candidatus Gracilibacteria 0.00 249630 0 P1 1046947 unclassified Candidatus Gracilibacteria 0.00 249630 249630 S 1540872 Candidatus Gracilibacteria bacterium HOT-871 0.00 415211 0 P 67810 Candidatus Bipolaricaulota 0.00 415211 0 G 2250122 Candidatus Bipolaricaulis 0.00 415211 415211 S 2026885 Candidatus Bipolaricaulis anaerobius 0.01 617649 0 G 1930592 Vampirococcus 0.01 617649 0 G1 2635552 unclassified Vampirococcus 0.01 617649 617649 S 1930593 Vampirococcus sp. LiM 0.04 4007255 0 P 200930 Deferribacteres 0.04 4007255 0 C 68337 Deferribacteres 0.04 4007255 0 O 191393 Deferribacterales 0.04 4007255 1230 F 191394 Deferribacteraceae 0.01 987647 0 G 117999 Denitrovibrio 0.01 987647 0 S 118000 Denitrovibrio acetiphilus 0.01 987647 987647 S1 522772 Denitrovibrio acetiphilus DSM 12809 0.01 939545 0 G 46200 Geovibrio 0.01 939545 939545 S 139438 Geovibrio thiophilus 0.01 714149 0 G 53572 Deferribacter 0.01 714149 0 S 197162 Deferribacter desulfuricans 0.01 714149 714149 S1 639282 Deferribacter desulfuricans SSM1 0.01 703796 0 G 2351 Flexistipes 0.01 703796 0 S 2352 Flexistipes sinusarabici 0.01 703796 703796 S1 717231 Flexistipes sinusarabici DSM 4947 0.01 660888 0 G 545865 Calditerrivibrio 0.01 660888 0 S 477976 Calditerrivibrio nitroreducens 0.01 660888 660888 S1 768670 Calditerrivibrio nitroreducens DSM 19672 0.04 4007027 0 P 200940 Thermodesulfobacteria 0.04 4007027 0 C 67799 Thermodesulfobacteria 0.04 4007027 0 O 188710 Thermodesulfobacteriales 0.04 4007027 1754 F 188711 Thermodesulfobacteriaceae 0.02 1464394 5958 G 1740 Thermodesulfobacterium 0.01 518528 0 G1 2638574 unclassified Thermodesulfobacterium 0.01 518528 518528 S 2234087 Thermodesulfobacterium sp. TA1 0.01 506118 0 S 1741 Thermodesulfobacterium commune 0.01 506118 506118 S1 289377 Thermodesulfobacterium commune DSM 2178 0.00 433790 0 S 1295609 Thermodesulfobacterium geofontis 0.00 433790 433790 S1 795359 Thermodesulfobacterium geofontis OPF15 0.01 734395 0 G 2033601 Thermosulfuriphilus 0.01 734395 734395 S 1936021 Thermosulfuriphilus ammonigenes 0.01 704029 0 G 241192 Thermodesulfatator 0.01 704029 0 S 171695 Thermodesulfatator indicus 0.01 704029 704029 S1 667014 Thermodesulfatator indicus DSM 15286 0.01 563516 0 G 1522431 Thermosulfurimonas 0.01 563516 563516 S 2047767 Thermosulfurimonas marina 0.01 538939 0 G 444090 Caldimicrobium 0.01 538939 538939 S 1653476 Caldimicrobium thiodismutans 0.02 1691212 0 D1 49928 unclassified Bacteria 0.01 1045383 1045383 S 2717699 bacterium BFN5 0.01 634276 634276 S 1561003 bacterium 2013Arg42i 0.00 11263 11263 S 1869227 bacterium 0.00 148 148 S 1264699 bacterium 72B 0.00 83 83 S 662024 endophytic bacterium LOB-07 0.00 59 59 S 1264698 bacterium 36B 0.02 1452720 0 P 1930617 Calditrichaeota 0.02 1452720 0 C 1962850 Calditrichae 0.02 1452720 0 O 1962852 Calditrichales 0.02 1452720 0 F 1962854 Calditrichaceae 0.02 1452720 0 G 187144 Caldithrix 0.02 1452720 0 S 187145 Caldithrix abyssi 0.02 1452720 1452720 S1 880073 Caldithrix abyssi DSM 13497 0.01 1301155 38 P 74152 Elusimicrobia 0.01 820957 0 C 447830 Endomicrobia 0.01 820957 0 O 1783344 Endomicrobiales 0.01 820957 0 F 1783343 Endomicrobiaceae 0.01 820957 598 G 1408194 Endomicrobium 0.00 442912 442912 S 1408281 Endomicrobium proavitum 0.00 377447 377447 S 1408204 Candidatus Endomicrobium trichonymphae 0.01 480160 0 C 641853 Elusimicrobia 0.01 480160 0 O 641854 Elusimicrobiales 0.01 480160 0 F 641876 Elusimicrobiaceae 0.01 480160 0 G 423604 Elusimicrobium 0.01 480160 0 S 423605 Elusimicrobium minutum 0.01 480160 480160 S1 445932 Elusimicrobium minutum Pei191 0.01 1150067 0 P 68297 Dictyoglomi 0.01 1150067 0 C 203486 Dictyoglomia 0.01 1150067 0 O 203487 Dictyoglomales 0.01 1150067 0 F 203488 Dictyoglomaceae 0.01 1150067 8172 G 13 Dictyoglomus 0.01 586975 0 S 14 Dictyoglomus thermophilum 0.01 586975 586975 S1 309799 Dictyoglomus thermophilum H-6-12 0.01 554920 0 S 513050 Dictyoglomus turgidum 0.01 554920 554920 S1 515635 Dictyoglomus turgidum DSM 6724 0.01 906462 0 P 200938 Chrysiogenetes 0.01 906462 0 C 118001 Chrysiogenetes 0.01 906462 0 O 189769 Chrysiogenales 0.01 906462 0 F 189770 Chrysiogenaceae 0.01 906462 0 G 393029 Desulfurispirillum 0.01 906462 0 S 936456 Desulfurispirillum indicum 0.01 906462 906462 S1 653733 Desulfurispirillum indicum S5 0.01 474092 0 D1 2498710 Caldiserica/Cryosericota group 0.01 474092 0 P 67814 Caldiserica 0.01 474092 0 C 693071 Caldisericia 0.01 474092 0 O 693072 Caldisericales 0.01 474092 0 F 693073 Caldisericaceae 0.01 474092 0 G 693074 Caldisericum 0.01 474092 0 S 693075 Caldisericum exile 0.01 474092 474092 S1 511051 Caldisericum exile AZM16c01 0.01 460589 0 P 2138240 Coprothermobacterota 0.01 460589 0 C 2138243 Coprothermobacteria 0.01 460589 0 O 2138246 Coprothermobacterales 0.01 460589 0 F 2138247 Coprothermobacteraceae 0.01 460589 0 G 68335 Coprothermobacter 0.01 460589 0 S 35786 Coprothermobacter proteolyticus 0.01 460589 460589 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 24993 3589 D1 48479 environmental samples 0.00 13984 13984 S 429581 uncultured bacterium pMCBF6 0.00 1398 1398 S 1328261 uncultured bacterium AST2 0.00 1159 1159 S 743682 uncultured bacterium pAKD4 0.00 1149 1149 S 795324 bacterium enrichment culture clone 2b(2010) 0.00 1001 1001 S 795323 bacterium enrichment culture clone 2a(2010) 0.00 936 936 S 558689 uncultured bacterium HHV35 0.00 654 654 S 795322 bacterium enrichment culture clone 1(2010) 0.00 574 574 S 77133 uncultured bacterium 0.00 230 230 S 136143 uncultured eubacterium pIE1115 0.00 226 226 S 1328262 uncultured bacterium AST3 0.00 57 57 S 558688 uncultured bacterium HH1107 0.00 18 18 S 558687 uncultured bacterium HHV216 0.00 18 18 S 1328260 uncultured bacterium AST1 10.96 989250469 77497 D 2759 Eukaryota 8.83 796702921 8 D1 33154 Opisthokonta 8.83 796678134 0 K 33208 Metazoa 8.83 796678134 0 K1 6072 Eumetazoa 8.83 796678134 0 K2 33213 Bilateria 8.83 796678134 0 K3 33511 Deuterostomia 8.83 796678134 0 P 7711 Chordata 8.83 796678134 0 P1 89593 Craniata 8.83 796678134 0 P2 7742 Vertebrata 8.83 796678134 0 P3 7776 Gnathostomata 8.83 796678134 0 P4 117570 Teleostomi 8.83 796678134 0 P5 117571 Euteleostomi 8.83 796678134 0 P6 8287 Sarcopterygii 8.83 796678134 0 P7 1338369 Dipnotetrapodomorpha 8.83 796678134 0 P8 32523 Tetrapoda 8.83 796678134 0 P9 32524 Amniota 8.83 796678134 0 C 40674 Mammalia 8.83 796678134 0 C1 32525 Theria 8.83 796678134 0 C2 9347 Eutheria 8.83 796678134 0 C3 1437010 Boreoeutheria 8.83 796678134 0 C4 314146 Euarchontoglires 8.83 796678134 0 O 9443 Primates 8.83 796678134 0 O1 376913 Haplorrhini 8.83 796678134 0 O2 314293 Simiiformes 8.83 796678134 0 O3 9526 Catarrhini 8.83 796678134 0 O4 314295 Hominoidea 8.83 796678134 0 F 9604 Hominidae 8.83 796678134 0 F1 207598 Homininae 8.83 796678134 0 G 9605 Homo 8.83 796678134 796678134 S 9606 Homo sapiens 0.00 24779 0 K 4751 Fungi 0.00 24779 0 K1 451864 Dikarya 0.00 15600 0 P 4890 Ascomycota 0.00 15600 0 P1 716545 saccharomyceta 0.00 12486 0 P2 147538 Pezizomycotina 0.00 12486 0 P3 716546 leotiomyceta 0.00 12486 1 P4 715989 sordariomyceta 0.00 10291 0 C 147550 Sordariomycetes 0.00 5529 0 C1 222544 Sordariomycetidae 0.00 5133 0 O 5139 Sordariales 0.00 5133 0 F 5148 Sordariaceae 0.00 5133 824 G 5140 Neurospora 0.00 4011 4011 S 5142 Neurospora intermedia 0.00 298 298 S 5141 Neurospora crassa 0.00 396 0 O 5114 Diaporthales 0.00 396 0 F 399129 Cryphonectriaceae 0.00 396 0 F1 218105 Cryphonectria-Endothia species complex 0.00 396 0 G 5115 Cryphonectria 0.00 396 396 S 5116 Cryphonectria parasitica 0.00 4762 0 C1 222543 Hypocreomycetidae 0.00 4762 0 O 5125 Hypocreales 0.00 3920 0 F 110618 Nectriaceae 0.00 3920 0 G 5506 Fusarium 0.00 2775 0 G1 171627 Fusarium fujikuroi species complex 0.00 2775 2775 S 948311 Fusarium proliferatum 0.00 1145 0 G1 171631 Fusarium oxysporum species complex 0.00 1145 27 S 5507 Fusarium oxysporum 0.00 565 565 S1 96318 Fusarium oxysporum f. sp. raphani 0.00 553 553 S1 96317 Fusarium oxysporum f. sp. matthiolae 0.00 842 0 F 5129 Hypocreaceae 0.00 842 0 G 5543 Trichoderma 0.00 842 842 S 5544 Trichoderma harzianum 0.00 2194 0 C 147548 Leotiomycetes 0.00 2194 0 O 5120 Erysiphales 0.00 2194 0 F 34371 Erysiphaceae 0.00 2194 0 G 34372 Blumeria 0.00 2194 0 S 34373 Blumeria graminis 0.00 2194 2194 S1 62688 Blumeria graminis f. sp. hordei 0.00 3114 0 P2 147537 Saccharomycotina 0.00 3114 0 C 4891 Saccharomycetes 0.00 3114 0 O 4892 Saccharomycetales 0.00 3114 0 F 4893 Saccharomycetaceae 0.00 1585 0 G 300275 Lachancea 0.00 1585 1585 S 4955 Lachancea fermentati 0.00 1529 0 G 4953 Zygosaccharomyces 0.00 1529 1529 S 4954 Zygosaccharomyces bailii 0.00 9179 0 P 5204 Basidiomycota 0.00 9179 0 P1 5302 Agaricomycotina 0.00 9179 0 C 155619 Agaricomycetes 0.00 8368 0 C1 452333 Agaricomycetidae 0.00 8368 6 O 5338 Agaricales 0.00 6608 0 F 654128 Marasmiaceae 0.00 6608 0 G 221102 Moniliophthora 0.00 6608 6608 S 221103 Moniliophthora roreri 0.00 1754 0 F 104366 Pleurotaceae 0.00 1754 0 G 5320 Pleurotus 0.00 1754 1754 S 5322 Pleurotus ostreatus 0.00 811 0 C1 355688 Agaricomycetes incertae sedis 0.00 811 0 O 36064 Cantharellales 0.00 811 0 F 5250 Ceratobasidiaceae 0.00 811 0 G 5238 Thanatephorus 0.00 811 811 S 107832 Thanatephorus cucumeris 1.58 142391961 428 D1 2698737 Sar 1.38 124248200 29 D2 33630 Alveolata 1.37 123966068 1796 P 5794 Apicomplexa 0.75 67918788 1156 C 422676 Aconoidasida 0.54 48854657 0 O 5819 Haemosporida 0.54 48854657 0 F 1639119 Plasmodiidae 0.54 48854657 672122 G 5820 Plasmodium 0.26 23421064 358544 G1 418103 Plasmodium (Plasmodium) 0.07 6287626 6287626 S 5855 Plasmodium vivax 0.06 5762857 0 S 5827 Plasmodium cynomolgi 0.06 5762857 5762857 S1 1120755 Plasmodium cynomolgi strain B 0.06 5699889 5699889 S 5858 Plasmodium malariae 0.06 5312148 0 S 5850 Plasmodium knowlesi 0.06 5312148 5312148 S1 5851 Plasmodium knowlesi strain H 0.10 8774379 855253 G1 418101 Plasmodium (Vinckeia) 0.03 3089170 0 S 5825 Plasmodium chabaudi 0.03 3089170 3089170 S1 31271 Plasmodium chabaudi chabaudi 0.03 2544269 2544269 S 5861 Plasmodium yoelii 0.03 2285687 0 S 5821 Plasmodium berghei 0.03 2285687 2285687 S1 5823 Plasmodium berghei ANKA 0.08 6843810 2244064 G1 418107 Plasmodium (Laverania) 0.02 1402698 0 S 5833 Plasmodium falciparum 0.02 1402698 1402698 S1 36329 Plasmodium falciparum 3D7 0.01 1175712 1175712 S 880535 Plasmodium sp. gorilla clade G2 0.01 1082974 1082974 S 5854 Plasmodium reichenowi 0.01 938362 938362 S 647221 Plasmodium gaboni 0.07 6553214 6553214 S 208452 Plasmodium coatneyi 0.03 2590068 0 G1 418104 Plasmodium (Haemamoeba) 0.03 2590068 2590068 S 85471 Plasmodium relictum 0.21 19062975 1316 O 5863 Piroplasmida 0.12 10917804 0 F 27994 Theileriidae 0.12 10917804 35864 G 5873 Theileria 0.04 3535558 0 S 5872 Theileria equi 0.04 3535558 3535558 S1 1537102 Theileria equi strain WA 0.03 2716778 0 S 68886 Theileria orientalis 0.03 2716778 2716778 S1 869250 Theileria orientalis strain Shintoku 0.03 2344237 0 S 5875 Theileria parva 0.03 2344237 2344237 S1 333668 Theileria parva strain Muguga 0.03 2285367 2285367 S 5874 Theileria annulata 0.09 8143855 0 F 32594 Babesiidae 0.09 8143855 858 G 5864 Babesia 0.04 3592604 3592604 S 5866 Babesia bigemina 0.03 2545593 0 S 5865 Babesia bovis 0.03 2545593 2545593 S1 484906 Babesia bovis T2Bo 0.02 2004800 0 S 5868 Babesia microti 0.02 2004800 2004800 S1 1133968 Babesia microti strain RI 0.62 56045484 0 C 1280412 Conoidasida 0.62 56045484 0 C1 5796 Coccidia 0.62 56045484 0 O 75739 Eucoccidiorida 0.62 56045484 49 O1 423054 Eimeriorina 0.59 53478534 50950 F 5809 Sarcocystidae 0.21 18682761 0 G 5810 Toxoplasma 0.21 18682761 0 S 5811 Toxoplasma gondii 0.21 18682761 18682761 S1 508771 Toxoplasma gondii ME49 0.19 17492621 0 G 94642 Besnoitia 0.19 17492621 17492621 S 94643 Besnoitia besnoiti 0.19 17252202 0 G 29175 Neospora 0.19 17252202 0 S 29176 Neospora caninum 0.19 17252202 17252202 S1 572307 Neospora caninum Liverpool 0.03 2566901 0 F 35082 Cryptosporidiidae 0.03 2566901 0 G 5806 Cryptosporidium 0.03 2566901 0 S 5807 Cryptosporidium parvum 0.03 2566901 2566901 S1 353152 Cryptosporidium parvum Iowa II 0.00 282103 0 P 5878 Ciliophora 0.00 282103 0 P1 431838 Intramacronucleata 0.00 282103 0 C 6020 Oligohymenophorea 0.00 282103 0 O 33825 Peniculida 0.00 282103 0 F 340080 Parameciidae 0.00 282103 0 G 5884 Paramecium 0.00 282103 0 S 5888 Paramecium tetraurelia 0.00 282103 282103 S1 412030 Paramecium tetraurelia strain d4-2 0.20 18044812 0 D2 33634 Stramenopiles 0.20 18044812 0 D3 2696291 Ochrophyta 0.20 18044812 455 P 2836 Bacillariophyta 0.11 9925278 0 C 33836 Coscinodiscophyceae 0.11 9925278 0 C1 33846 Thalassiosirophycidae 0.11 9925278 0 O 33847 Thalassiosirales 0.11 9925278 0 F 29202 Thalassiosiraceae 0.11 9925278 0 G 35127 Thalassiosira 0.11 9925278 0 S 35128 Thalassiosira pseudonana 0.11 9925278 9925278 S1 296543 Thalassiosira pseudonana CCMP1335 0.09 8119079 0 C 33849 Bacillariophyceae 0.09 8119079 0 C1 33850 Bacillariophycidae 0.09 8119079 0 O 38748 Naviculales 0.09 8119079 0 F 38749 Phaeodactylaceae 0.09 8119079 0 G 2849 Phaeodactylum 0.09 8119079 0 S 2850 Phaeodactylum tricornutum 0.09 8119079 8119079 S1 556484 Phaeodactylum tricornutum CCAP 1055/1 0.00 98521 0 D2 543769 Rhizaria 0.00 98521 0 P 136419 Cercozoa 0.00 98521 0 C 29197 Chlorarachniophyceae 0.00 98521 0 G 227085 Bigelowiella 0.00 98521 98521 S 227086 Bigelowiella natans 0.49 44387874 0 D1 2611352 Discoba 0.49 44387874 0 P 33682 Euglenozoa 0.49 44387874 0 C 5653 Kinetoplastea 0.49 44387874 0 C1 2704647 Metakinetoplastina 0.49 44387874 0 O 2704949 Trypanosomatida 0.49 44387874 1540 F 5654 Trypanosomatidae 0.40 36331480 0 F1 1286322 Leishmaniinae 0.40 36331480 240259 G 5658 Leishmania 0.27 24500950 2398000 G1 38568 Leishmania 0.09 7820484 5953843 G2 38574 Leishmania donovani species complex 0.01 948093 0 S 5671 Leishmania infantum 0.01 948093 948093 S1 435258 Leishmania infantum JPCM5 0.01 918548 918548 S 5661 Leishmania donovani 0.08 7410499 0 G2 38582 Leishmania mexicana species complex 0.08 7410499 0 S 5665 Leishmania mexicana 0.08 7410499 7410499 S1 929439 Leishmania mexicana MHOM/GT/2001/U1103 0.08 6871967 0 G2 38581 Leishmania major species complex 0.08 6871967 0 S 5664 Leishmania major 0.08 6871967 6871967 S1 347515 Leishmania major strain Friedlin 0.13 11590271 5594657 G1 37616 Viannia 0.03 3031879 0 G2 37617 Leishmania braziliensis species complex 0.03 3031879 0 S 5660 Leishmania braziliensis 0.03 3031879 3031879 S1 420245 Leishmania braziliensis MHOM/BR/75/M2904 0.03 2963735 0 G2 38579 Leishmania guyanensis species complex 0.03 2963735 2963735 S 5679 Leishmania panamensis 0.09 8054854 0 G 5690 Trypanosoma 0.09 8054854 0 G1 39700 Trypanozoon 0.09 8054854 4873504 S 5691 Trypanosoma brucei 0.02 2021219 0 S1 5702 Trypanosoma brucei brucei 0.02 2021219 2021219 S2 185431 Trypanosoma brucei brucei TREU927 0.01 1160131 0 S1 31285 Trypanosoma brucei gambiense 0.01 1160131 1160131 S2 679716 Trypanosoma brucei gambiense DAL972 0.06 5339883 0 D1 554915 Amoebozoa 0.06 5339883 0 P 2605435 Evosea 0.06 5339883 0 C 142796 Eumycetozoa 0.06 5336735 0 C1 33083 Dictyostelia 0.06 5329674 0 O 2058949 Dictyosteliales 0.06 5329674 0 F 2058185 Dictyosteliaceae 0.06 5329674 134 G 5782 Dictyostelium 0.06 5327764 3230 S 44689 Dictyostelium discoideum 0.06 5324534 5324534 S1 352472 Dictyostelium discoideum AX4 0.00 892 892 S 79012 Dictyostelium firmibasis 0.00 884 884 S 5787 Dictyostelium giganteum 0.00 7061 0 O 2058181 Acytosteliales 0.00 7061 0 F 2058183 Acytosteliaceae 0.00 7061 0 G 2058189 Heterostelium 0.00 7061 7061 S 13642 Heterostelium pallidum 0.00 3148 0 C1 33680 Myxogastria 0.00 3148 0 C2 137627 Myxogastromycetidae 0.00 3148 0 O 5789 Physariida 0.00 3148 0 F 1115744 Physaraceae 0.00 3148 0 G 5790 Physarum 0.00 3148 3148 S 5791 Physarum polycephalum 0.00 335901 253 C 3027 Cryptophyceae 0.00 203149 51 O 589350 Cryptomonadales 0.00 111449 0 F 2896 Cryptomonadaceae 0.00 111449 0 G 3030 Cryptomonas 0.00 111449 111449 S 2898 Cryptomonas paramecium 0.00 91649 0 F 589351 Hemiselmidaceae 0.00 91649 0 G 77924 Hemiselmis 0.00 91649 91649 S 464988 Hemiselmis andersenii 0.00 132499 0 O 589342 Pyrenomonadales 0.00 132499 0 F 589343 Geminigeraceae 0.00 132499 0 G 55528 Guillardia 0.00 132499 132499 S 55529 Guillardia theta 0.00 9480 0 P 2763 Rhodophyta 0.00 5513 0 C 2806 Florideophyceae 0.00 5513 0 C1 2045261 Rhodymeniophycidae 0.00 5513 0 O 31468 Gracilariales 0.00 5513 0 F 31469 Gracilariaceae 0.00 2517 0 G 2774 Gracilaria 0.00 2517 2517 S 38400 Gracilaria robusta 0.00 1892 0 G 2510776 Agarophyton 0.00 1892 1892 S 2510777 Agarophyton chilense 0.00 1104 0 G 2781 Gracilariopsis 0.00 1104 1104 S 2782 Gracilariopsis lemaneiformis 0.00 3967 0 C 2797 Bangiophyceae 0.00 3967 0 O 29216 Bangiales 0.00 3967 0 F 31345 Bangiaceae 0.00 3967 0 G 1094566 Pyropia 0.00 3967 3967 S 60925 Pyropia pulchra 0.00 4952 0 K 33090 Viridiplantae 0.00 4952 0 P 35493 Streptophyta 0.00 4952 0 P1 131221 Streptophytina 0.00 4952 0 P2 3193 Embryophyta 0.00 4952 0 P3 58023 Tracheophyta 0.00 4952 0 P4 78536 Euphyllophyta 0.00 4952 0 P5 58024 Spermatophyta 0.00 4952 0 C 3398 Magnoliopsida 0.00 4952 0 C1 1437183 Mesangiospermae 0.00 3931 0 C2 71240 eudicotyledons 0.00 3931 0 C3 91827 Gunneridae 0.00 3931 0 C4 1437201 Pentapetalae 0.00 3931 0 C5 71275 rosids 0.00 3453 0 C6 91836 malvids 0.00 3453 0 O 3699 Brassicales 0.00 3453 0 F 3700 Brassicaceae 0.00 3453 0 F1 981071 Brassiceae 0.00 3453 0 G 3705 Brassica 0.00 3453 3453 S 3708 Brassica napus 0.00 478 0 C6 91835 fabids 0.00 478 0 O 72025 Fabales 0.00 478 0 F 3803 Fabaceae 0.00 478 0 F1 3814 Papilionoideae 0.00 478 0 F2 2231393 50 kb inversion clade 0.00 478 0 F3 2231382 NPAAA clade 0.00 478 0 F4 2233838 Hologalegina 0.00 478 0 F5 2233839 IRL clade 0.00