{
  "actual_extension": "bt2",
  "assembly": "GRCr8",
  "builder": "aws-indexes:45fbecf7e03f+manual-v2.5.4",
  "built_utc": "2026-05-26T00:06:27Z",
  "command": "bowtie2-build --threads 64 /data/work/grcr8/source.fa /data/work/grcr8/GRCr8",
  "date": "2026-05-26",
  "expected_extension": "bt2",
  "id": "grcr8",
  "index_base": "GRCr8",
  "inputs": [
    {
      "md5": "f7f47214cb2b7987c2edc85b3d3a10c5",
      "path": "source.fa.gz"
    }
  ],
  "notes": "Current Genome Reference Consortium rat reference",
  "outputs": [
    "GRCr8.1.bt2",
    "GRCr8.2.bt2",
    "GRCr8.3.bt2",
    "GRCr8.4.bt2",
    "GRCr8.rev.1.bt2",
    "GRCr8.rev.2.bt2",
    "GRCr8.dict",
    "GRCr8.zip",
    "GRCr8.md5",
    "GRCr8.build.txt",
    "GRCr8.manifest.json"
  ],
  "schema_version": "1.0",
  "source": "NCBI RefSeq",
  "source_urls": [
    "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/036/323/735/GCF_036323735.1_GRCr8/GCF_036323735.1_GRCr8_genomic.fna.gz"
  ],
  "species": "Rat",
  "threads": "64",
  "tool": "bowtie2-build",
  "tool_version": "2.5.4",
  "tool_version_output": "/home/ec2-user/bowtie2/bowtie2-build-s version 2.5.4"
}